mRNA_Ecto-sp13_S_contig13404.2723.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig13404.2723.1 vs. uniprot
Match: D7G6W5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6W5_ECTSI) HSP 1 Score: 344 bits (882), Expect = 3.910e-117 Identity = 175/206 (84.95%), Postives = 181/206 (87.86%), Query Frame = 1
Query: 1 MLSRVRPVVLRKRRALSVVVDGAASRSLAERGYAYVKGLRILDDVTIARLRVRLPLLFRGEFDTGVYPDEMHWREGISRDDAPREIVNAWKADRTVASVVLSEHLGRLAASLPGWDSARIAQDDVVWKPPGSGPVGYHQDSAYISRQFTPRANNSVTMWIALDDCDREVGTIEYATMTTPLPPPEGSAADPSTSRCSLPSFHGADA 618
M+SR RPVVL++RR SVVVDGAAS+SLAERGY YVKGLR+LDDVT+ARLRVRLPLLFRGEFDTGVYPDEMHWREGISRDDAPREIVNAWKADRTVASVVLSEHL RLAASL GWDSARIAQDDVVWKPPGSGPVGYHQDSAYISRQFTPRANNSVTMWIALDDCDRE GSAAD STSR SLPSFHGADA
Sbjct: 1 MMSRFRPVVLQQRRTFSVVVDGAASQSLAERGYTYVKGLRVLDDVTVARLRVRLPLLFRGEFDTGVYPDEMHWREGISRDDAPREIVNAWKADRTVASVVLSEHLARLAASLAGWDSARIAQDDVVWKPPGSGPVGYHQDSAYISRQFTPRANNSVTMWIALDDCDRE-----------------GSAADSSTSRSSLPSFHGADA 189
BLAST of mRNA_Ecto-sp13_S_contig13404.2723.1 vs. uniprot
Match: A0A7S1IUX8_9EUGL (Hypothetical protein (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1IUX8_9EUGL) HSP 1 Score: 184 bits (467), Expect = 1.360e-55 Identity = 89/129 (68.99%), Postives = 99/129 (76.74%), Query Frame = 1
Query: 142 ARLRVRLPLLFRGEFDTGVYPDEMHWREGISRDDAPREIVNAWKADRTVASVVLSEHLGRLAASLPGWDSA-RIAQDDVVWKPPGSGPVGYHQDSAYISRQFTPRANNSVTMWIALDDCDREVGTIEYA 525
ARLR R LF G F+TGVYPDE HWREGIS APREIVN WKADR VASV LSE LGR+AA L GW+ RIAQDDV+WKPP + +G+HQDSAYIS QF P +NSVT+WIALDD D E G +EYA
Sbjct: 28 ARLRDRYDSLFAGRFETGVYPDEWHWREGISFPTAPREIVNGWKADRLVASVALSEELGRMAAQLMGWEQGTRIAQDDVLWKPPKAKGIGFHQDSAYISTQFQPYLDNSVTIWIALDDADPETGVVEYA 156
BLAST of mRNA_Ecto-sp13_S_contig13404.2723.1 vs. uniprot
Match: A0A6U3ZUB2_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3ZUB2_9STRA) HSP 1 Score: 191 bits (485), Expect = 2.270e-55 Identity = 96/167 (57.49%), Postives = 115/167 (68.86%), Query Frame = 1
Query: 73 SRSLAERGYAYVKGLRILDDVTIARLRVRLPLLFRGEFDTGVYPDEMHWREGISRDDAPREIVNAWKADRTVASVVLSEHLGRLAASLPGWDSARIAQDDVVWKPPGSGP----------------VGYHQDSAYISRQFTPRANNSVTMWIALDDCDREVGTIEYA 525
SR + +RGYA KG RIL +R R+PL+FRG FDTGVYPDE HWREGIS A REI NAWK+DRTVASVVL E +G+L A + GW+S R+AQDD+VWK P G VG+HQDSAYIS+QF+P NNS+T+WI+LDD D E G +EYA
Sbjct: 87 SRDIYQRGYAKSKG-RILSKDRCLAIRNRMPLIFRGIFDTGVYPDEWHWREGISFPHATREICNAWKSDRTVASVVLDESMGKLVADITGWESVRVAQDDLVWKVPYDGARRQEEVKVEEKNVNTVVGFHQDSAYISKQFSPYENNSLTVWISLDDADEESGCVEYA 252
BLAST of mRNA_Ecto-sp13_S_contig13404.2723.1 vs. uniprot
Match: A0A7S0FL38_9STRA (Hypothetical protein (Fragment) n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0FL38_9STRA) HSP 1 Score: 185 bits (470), Expect = 2.520e-54 Identity = 108/209 (51.67%), Postives = 131/209 (62.68%), Query Frame = 1
Query: 70 ASRSLAERGYAYVKGLRILDDVTIARLRVRLPLLFRGEFDTGVYPDEMHWREGISRDDAPREIVNAWKADRTVASVVLSEHLGRLAASLPGWDSARIAQDDVVWKPPGS--------------------GPVGYHQDSAYISRQFTPRANNSVTMWIALDDCDREVGTIEYATMTTPLPP----PEGSAADP---STSRCSLPSFHGAD 615
ASR L+ RG+A ++L T A++R RLP LFRGEFDTG YPDE HWREGIS++ A REI NAWK+DRT+ASVVL+E LGRL A + WDS RIAQDD+VWKPP VG+HQDSAYIS QF P +NSVT+W+AL+D D+E G +EYA + P EGS + S S + SFH AD
Sbjct: 23 ASR-LSARGFAPTNH-QLLTKQTCAKVRDRLPRLFRGEFDTGNYPDEWHWREGISKEHAAREICNAWKSDRTIASVVLNEELGRLVAEVMDWDSVRIAQDDLVWKPPSPQDDSNTRGAVGRELGAQRRIDTVGFHQDSAYISTQFEPYDSNSVTLWMALEDVDKESGCVEYAVGSHKWRPLLHYAEGSENEKERNSGSGSEISSFHSAD 229
BLAST of mRNA_Ecto-sp13_S_contig13404.2723.1 vs. uniprot
Match: A0A2R5GIF2_9STRA (Phytanoyl-CoA dioxygenase domain-containing protein 1-like n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GIF2_9STRA) HSP 1 Score: 184 bits (467), Expect = 3.440e-54 Identity = 92/157 (58.60%), Postives = 109/157 (69.43%), Query Frame = 1
Query: 55 VVDGAASRSLAERGYAYVKGLRILDDVTIARLRVRLPLLFRGEFDTGVYPDEMHWREGISRDDAPREIVNAWKADRTVASVVLSEHLGRLAASLPGWD-SARIAQDDVVWKPPGSGPVGYHQDSAYISRQFTPRANNSVTMWIALDDCDREVGTIEY 522
VV AS LA G+ V ++L D + R R R LF+G FDTG+YPDE HWREGIS+ DA REIVN WKAD +A VV S LG+LA L GW AR+AQDDV+WKPP +G V +HQDSAYIS QF P NNSVT+WIALDD D++ G +EY
Sbjct: 34 VVSADASAKLARDGFVAVG--KVLSDDEVQRARGRFEDLFKGNFDTGIYPDEWHWREGISKPDAFREIVNGWKADSQIAGVVRSPTLGKLATELMGWPHGARLAQDDVLWKPPLAGGVAFHQDSAYISAQFKPYENNSVTIWIALDDADQDTGVVEY 188
BLAST of mRNA_Ecto-sp13_S_contig13404.2723.1 vs. uniprot
Match: A0A7S0E1W7_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0E1W7_9CRYP) HSP 1 Score: 182 bits (462), Expect = 2.980e-53 Identity = 86/158 (54.43%), Postives = 107/158 (67.72%), Query Frame = 1
Query: 52 VVVDGAASRSLAERGYAYVKGLRILDDVTIARLRVRLPLLFRGEFDTGVYPDEMHWREGISRDDAPREIVNAWKADRTVASVVLSEHLGRLAASLPGWDSARIAQDDVVWKPPGSGPVGYHQDSAYISRQFTPRANNSVTMWIALDDCDREVGTIEYA 525
+ + A RS +G+ + ++L++ + R R+ LF GEFDTG+YPDE HWR+GIS A REI N WK+DR +AS+VL E GR A L GW SARIAQD V+WKP G+G V +HQDS YISRQFTP +NS+T W ALDD D E G IEYA
Sbjct: 53 ISLSDEAKRSFWSKGFLQLG--QVLNEEQVEACRARMERLFAGEFDTGIYPDEWHWRKGISYPGAVREICNGWKSDRVIASIVLGETFGRAACKLMGWPSARIAQDSVIWKPAGAGSVSWHQDSPYISRQFTPVDDNSLTFWCALDDADEETGVIEYA 208
BLAST of mRNA_Ecto-sp13_S_contig13404.2723.1 vs. uniprot
Match: A0A7S2S8Y4_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2S8Y4_9STRA) HSP 1 Score: 179 bits (455), Expect = 1.710e-52 Identity = 84/157 (53.50%), Postives = 109/157 (69.43%), Query Frame = 1
Query: 55 VVDGAASRSLAERGYAYVKGLRILDDVTIARLRVRLPLLFRGEFDTGVYPDEMHWREGISRDDAPREIVNAWKADRTVASVVLSEHLGRLAASLPGWDS-ARIAQDDVVWKPPGSGPVGYHQDSAYISRQFTPRANNSVTMWIALDDCDREVGTIEY 522
V+ S G+ V L +D+ T+ L+ R LF G+F+TG+YPDE HWREGISR DA REIVN WKAD V SVV S+ +G++A++L GW + +R+ QDD++WKPP +G V +HQD+AYIS QF P NNSVT+WIALDD D E G +EY
Sbjct: 27 VLSVTEQESFRRNGFLLVPNL--IDETTVESLKARYVDLFAGKFETGIYPDEWHWREGISRPDAFREIVNGWKADNVVRSVVTSQDIGKIASNLMGWKAGSRVGQDDILWKPPLAGEVAFHQDAAYISTQFEPAQNNSVTVWIALDDADEETGVVEY 181
BLAST of mRNA_Ecto-sp13_S_contig13404.2723.1 vs. uniprot
Match: L1I9R4_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1I9R4_GUITC) HSP 1 Score: 179 bits (453), Expect = 1.850e-52 Identity = 82/160 (51.25%), Postives = 103/160 (64.38%), Query Frame = 1
Query: 46 LSVVVDGAASRSLAERGYAYVKGLRILDDVTIARLRVRLPLLFRGEFDTGVYPDEMHWREGISRDDAPREIVNAWKADRTVASVVLSEHLGRLAASLPGWDSARIAQDDVVWKPPGSGPVGYHQDSAYISRQFTPRANNSVTMWIALDDCDREVGTIEYA 525
+ + + A S G+ + +L + R R+ LF G+FDTG+YPDE HWR+GIS A REI N WK+D+T+AS+VL E GR A L GW SARIAQD ++WKP G+G V +HQDS YIS+QF P NNS+T W ALDD D E G IEYA
Sbjct: 1 MGIHISKEARTSFRREGFVQLG--EVLSKEEVEACRSRMDRLFAGDFDTGIYPDEWHWRKGISLPGAVREICNGWKSDKTIASIVLGERFGRAACELMGWPSARIAQDSIIWKPAGAGSVSWHQDSPYISKQFIPEENNSITFWCALDDADEETGVIEYA 158
BLAST of mRNA_Ecto-sp13_S_contig13404.2723.1 vs. uniprot
Match: A0A812ULF0_9DINO (EctD protein n=1 Tax=Symbiodinium sp. CCMP2456 TaxID=1519616 RepID=A0A812ULF0_9DINO) HSP 1 Score: 178 bits (452), Expect = 7.820e-52 Identity = 93/188 (49.47%), Postives = 116/188 (61.70%), Query Frame = 1
Query: 52 VVVDGAASRSLAERGYAYVKGLRILDDVTIARLRVRLPLLFRGEFDTGVYPDEMHWREGISRDDAPREIVNAWKADRTVASVVLSEHLGRLAASLPGWDSARIAQDDVVWKPPGSGPVGYHQDSAYISRQFTPRANNSVTMWIALDDCDREVGTIEYATMTTPLPPPEGSAADPSTSRCSLPSFHGAD 615
+ + + R+ + G+ V+ L LD A LR LF G+F TG+YPDE HWREGIS+ D REIVNAWK+ VA+V L +LAA L GW S R+ QDDV+WKP G+ VGYHQDSAYIS+ F P A NSVT+WIALDD D E G +EYA + P + SA D + FHGA+
Sbjct: 1 MAISESERRAFQKDGFLLVENL--LDAEAAAELRSHFAELFAGKFPTGIYPDEWHWREGISKPDKFREIVNAWKSSPLVAAVALRARTAQLAAELMGWKSTRLGQDDVLWKPAGASGVGYHQDSAYISQNFVPVAENSVTVWIALDDADAETGVVEYAVGSHRWPAAKASAGDSA--------FHGAE 178
BLAST of mRNA_Ecto-sp13_S_contig13404.2723.1 vs. uniprot
Match: A0A7S4GPA4_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4GPA4_9EUGL) HSP 1 Score: 174 bits (442), Expect = 3.150e-49 Identity = 87/136 (63.97%), Postives = 101/136 (74.26%), Query Frame = 1
Query: 121 ILDDVTIARLRVRLPLLFRGEFDTGVYPDEMHWREGISRDDAPREIVNAWKADRTVASVVLSEHLGRLAASLPGWDS-ARIAQDDVVWKPPGSGPVGYHQDSAYISRQFTPRANNSVTMWIALDDCDREVGTIEYA 525
I D+ I R+R R LF G+F+TGVYPDE HWREG+S A REIVN WK DR VAS+ LSE LG LA+ L GW+ ARIAQDDV+WKPPG+ +GYHQDSAYIS QF P NNSVT+WIALD+ E G +EYA
Sbjct: 151 IAPDLAI-RIRDRFGGLFAGKFETGVYPDEWHWREGLSFPSAAREIVNGWKCDRLVASMALSEALGGLASQLMGWEQGARIAQDDVLWKPPGARGIGYHQDSAYISTQFLPYENNSVTVWIALDEATPENGAVEYA 285 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13404.2723.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig13404.2723.1 >prot_Ecto-sp13_S_contig13404.2723.1 ID=prot_Ecto-sp13_S_contig13404.2723.1|Name=mRNA_Ecto-sp13_S_contig13404.2723.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=206bp MLSRVRPVVLRKRRALSVVVDGAASRSLAERGYAYVKGLRILDDVTIARLback to top mRNA from alignment at Ecto-sp13_S_contig13404:1..1731- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig13404.2723.1 ID=mRNA_Ecto-sp13_S_contig13404.2723.1|Name=mRNA_Ecto-sp13_S_contig13404.2723.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1731bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13404:1..1731- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig13404:1..1731- >mRNA_Ecto-sp13_S_contig13404.2723.1 ID=mRNA_Ecto-sp13_S_contig13404.2723.1|Name=mRNA_Ecto-sp13_S_contig13404.2723.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=618bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13404:1..1731- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |