mRNA_Ecto-sp13_S_contig13386.2707.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig13386.2707.1
Unique NamemRNA_Ecto-sp13_S_contig13386.2707.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig13386.2707.1 vs. uniprot
Match: D8LB69_ECTSI (Cell division control protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LB69_ECTSI)

HSP 1 Score: 871 bits (2250), Expect = 4.080e-305
Identity = 496/578 (85.81%), Postives = 508/578 (87.89%), Query Frame = 1
Query:  571 AAGTTGSSSGGTRLSVRELPTDSIILASMVKLSGPYPVSASTGRPDLSAGIDDGRASLAAVSSILPHALEGEVLAEGSVFSVTGLFALIVVEVCAEEQWRVPAGEVGSSGGVVAVRVHGATELRLLRPTRSRRGGVAGPAESVGPLADGAAAVSSSEGAGSVNARRSWQKSTDDKGVAAAEAEPSDTPATACLSSALQPYRSPDAREWIRLVERDFGGLGNDVATAVAAVGTVLRASEKSRIGEDAGGGELTAPASGLLCHGPTGVGKTLLARSVAEHSGAPWFFLDCASVFRRDRGEAEQYVQDFLARAWACSPSVVVLDQVESICRRRPEAAGVTELQVLSVLLETMDRFRRPPSALRVFFLATCPDPAALDPSLLQRGRLEAVLQLGALDSAARASILGIHARDMLLEVLPSSPPLPSRPXXXXXXXXXXXXXXXXXHPPYEEKTDVVGDESPVRLGKPNRETAXXXXXXXXXXXXXXXXXXXXXXXRTRDEFLKLVAARCHGYLGSDLERLCREAAMSHFSVTTAAGAVDVVKGAGRHEAGGDLAATGGCGEGGGGDKAGAPGVRLGDFWAALN 2304
            A G TGSSSGGTRLSVRELPTDSI LAS+VKLSGPY VSASTGRPDL+  IDDGRASLAAVSSILPHALEGEVLAEGSVFSV GLFALIVVEVCAEEQWRVPA EVGS+GGVV VRVHGATELRLL PTRSRRGGVAGPAESVGPLADGAAA SSS  AGSVNA RSWQK TDDKGVA AEAEPS TPATA LS A QPYRSP AREWIRLVERDFGGLG+DVATA+AAVGTVLR SE+S + E AGG ELTAPASGLLCHGPTGVGKTLLARSVAEHSGAPWFFLDCASVFRRDRGEAEQYVQ+FLARAW CSPSVVVLDQVE ICRRRPEAAG+TELQVLSVLLE MDRFRRPPSA RVFFLATCPDPAAL PSLLQRGRLEAVL+LGALDSAARASIL IHARDM+LEVLPSSPPLPSRPXXXXXXXXXXXXXXXXX     EKTDVV DESP RL KPNRE                         RTRDEFL+LVAARCHGYLGSDLERLCREAAMSHFS  TAAGAVDVVKGAGRHEAGGDLAA GGCGEGGGGDK GAPGVRL DFWAALN
Sbjct:    3 AVGETGSSSGGTRLSVRELPTDSIALASVVKLSGPYSVSASTGRPDLAGRIDDGRASLAAVSSILPHALEGEVLAEGSVFSVAGLFALIVVEVCAEEQWRVPAVEVGSTGGVVVVRVHGATELRLLPPTRSRRGGVAGPAESVGPLADGAAAASSSADAGSVNAPRSWQKPTDDKGVAVAEAEPSGTPATAGLS-APQPYRSPGAREWIRLVERDFGGLGDDVATAIAAVGTVLRGSEESSVSETAGGDELTAPASGLLCHGPTGVGKTLLARSVAEHSGAPWFFLDCASVFRRDRGEAEQYVQEFLARAWTCSPSVVVLDQVECICRRRPEAAGITELQVLSVLLEAMDRFRRPPSAPRVFFLATCPDPAALGPSLLQRGRLEAVLRLGALDSAARASILSIHARDMVLEVLPSSPPLPSRPXXXXXXXXXXXXXXXXXXXXXXEKTDVVDDESPFRLEKPNREEEAEAAAATPVSAVVALTPPAVSPPRTRDEFLELVAARCHGYLGSDLERLCREAAMSHFSAATAAGAVDVVKGAGRHEAGGDLAAIGGCGEGGGGDKGGAPGVRLLDFWAALN 579          
BLAST of mRNA_Ecto-sp13_S_contig13386.2707.1 vs. uniprot
Match: R9T831_METII (AAA family ATPase, CDC48 subfamily protein n=2 Tax=Candidatus Methanomassiliicoccus intestinalis TaxID=1406512 RepID=R9T831_METII)

HSP 1 Score: 109 bits (272), Expect = 6.210e-21
Identity = 68/203 (33.50%), Postives = 110/203 (54.19%), Query Frame = 1
Query: 1198 RLVERDFGGLGNDVATAVAAVGTVLRASEK-SRIGEDAGGGELTAPASGLLCHGPTGVGKTLLARSVAEHSGAPWFFLDCASVFRRDRGEAEQYVQDFLARAWACSPSVVVLDQVESICRRRPEAAGVTELQVLSVLLETMDRFRRPPSALRVFFLATCPDPAALDPSLLQRGRLEAVLQLGALDSAARASILGIHARDMLLE 1803
            R+   D GGLG++V      +   LR  E   R+G       + AP  G+L HGP G GKTLLA++VA  + A +  +    +  +  GE+E+++++   +A   +P+++ +D+++SI  +R E  G TE +V++ +L  MD      S  +V  +     P ALDP+L + GR +  +++G  D A R  IL IH R M LE
Sbjct:  175 RISYEDIGGLGDEVKKVREMIELPLRHPELFERLG-------IEAP-KGVLLHGPPGTGKTLLAKAVASETNANFMTIGGPEIMSKYHGESEEHLREIFKQAQENAPTIIFIDEIDSIAPKREEVTGETERRVVAQMLSLMDGLE---SRGKVVVIGATNRPNALDPALRRPGRFDREIEIGVPDKAGRLEILQIHTRGMPLE 366          
BLAST of mRNA_Ecto-sp13_S_contig13386.2707.1 vs. uniprot
Match: A0A841H0J3_9BACT (Transitional endoplasmic reticulum ATPase n=1 Tax=Longimicrobium terrae TaxID=1639882 RepID=A0A841H0J3_9BACT)

HSP 1 Score: 109 bits (272), Expect = 7.080e-21
Identity = 72/216 (33.33%), Postives = 106/216 (49.07%), Query Frame = 1
Query: 1159 LQPYRSPDAREWIRLVERDFGGLGNDVATAVAAVGTVLRASEK-SRIGEDAGGGELTAPASGLLCHGPTGVGKTLLARSVAEHSGAPWFFLDCASVFRRDRGEAEQYVQDFLARAWACSPSVVVLDQVESICRRRPEAAGVTELQVLSVLLETMDRFRRPPSALRVFFLATCPDPAALDPSLLQRGRLEAVLQLGALDSAARASILGIHARDMLLE 1803
            L  Y     R    +   D GG GN V      +   L+  E   R+G D        P  G+L HGP G GKTL+AR+VA  + A +F +    +  R  GE+EQ ++D   +A   +PS+V +D+++SI  +R EA G  E ++++ LL  MD          V  +     P ALD +L + GR +  + +G  D+  R  ILGIH R M L+
Sbjct:  201 LPEYEEATERRSADVTYEDIGGQGNTVEQVREMIELPLKHPELFQRLGID--------PPKGVLLHGPPGTGKTLIARAVANEADAQFFHIAGPEIMGRFHGESEQRLRDVFQQAAEQAPSIVFIDEIDSIAPKREEATGEVERRIVAQLLTLMDGLE---PRQNVVVIGATNRPNALDEALRRPGRFDREIVIGVPDTTGRREILGIHTRGMPLD 405          
BLAST of mRNA_Ecto-sp13_S_contig13386.2707.1 vs. uniprot
Match: UPI000369BADB (CDC48 family AAA ATPase n=1 Tax=Methanomassiliicoccus luminyensis TaxID=1080712 RepID=UPI000369BADB)

HSP 1 Score: 108 bits (270), Expect = 1.120e-20
Identity = 67/203 (33.00%), Postives = 109/203 (53.69%), Query Frame = 1
Query: 1198 RLVERDFGGLGNDVATAVAAVGTVLRASEK-SRIGEDAGGGELTAPASGLLCHGPTGVGKTLLARSVAEHSGAPWFFLDCASVFRRDRGEAEQYVQDFLARAWACSPSVVVLDQVESICRRRPEAAGVTELQVLSVLLETMDRFRRPPSALRVFFLATCPDPAALDPSLLQRGRLEAVLQLGALDSAARASILGIHARDMLLE 1803
            R+   D GGLG++V      +   LR  E   R+G +A          G+L HGP G GKTLLA++VA  + A +  +    +  +  GE+E++++D   +A   +P+++ +D+++SI  +R E +G TE +V++ +L  MD      S  +V  +     P ALDP+L + GR +  +++G  D   R  IL IH R M LE
Sbjct:  175 RISYEDIGGLGDEVKKVREMIELPLRHPELFERLGVEA--------PKGVLLHGPPGTGKTLLAKAVASETNANFMTIGGPEIMSKYHGESEEHLRDIFKQAQENAPTIIFIDEIDSIAPKREEVSGETERRVVAQMLSLMDGLE---SRGKVVVIGATNRPNALDPALRRPGRFDREIEIGVPDRNGRLEILQIHTRGMPLE 366          
BLAST of mRNA_Ecto-sp13_S_contig13386.2707.1 vs. uniprot
Match: A0A3M9ZMD3_9ARCH (AAA family ATPase n=2 Tax=unclassified Thaumarchaeota TaxID=1104572 RepID=A0A3M9ZMD3_9ARCH)

HSP 1 Score: 105 bits (262), Expect = 1.030e-19
Identity = 76/212 (35.85%), Postives = 112/212 (52.83%), Query Frame = 1
Query: 1171 RSPDAREWIRLVERDFGGLGNDVATAVAAVGTVLRASEK-SRIGEDAGGGELTAPASGLLCHGPTGVGKTLLARSVAEHSGAPWFFLDCASVFRRDRGEAEQYVQDFLARAWACSPSVVVLDQVESICRRRPEAAGVTELQVLSVLLETMDRFRRPPSALRVFFLATCPDPAALDPSLLQRGRLEAVLQLGALDSAARASILGIHARDMLLE 1803
            +S DA     +   D GG+ + V      V   LR  E   R+G       + AP  G+L HGP G GKTLLAR+VA  + + +  L    +  R  GE+E+ ++     A   +PSV+ +D+++SI  +R EAAG  E +++S LL  MD     P   RV  +A    P ++DP+L + GRL+  +++G  D+A R  IL IH R M LE
Sbjct:  166 QSVDAAARPTVTYDDLGGMRDAVLRIREMVELPLRHPELFERVG-------IEAP-KGVLLHGPPGTGKTLLARAVAGETNSNFVHLSGPEIMARHYGESEERLRKVFKDAQDSAPSVIFIDELDSIAPKRDEAAGELERRIVSQLLTLMDGIA--PRG-RVVVIAATNRPDSIDPALRRPGRLDREIEIGVPDAAGRLEILNIHTRGMPLE 366          
BLAST of mRNA_Ecto-sp13_S_contig13386.2707.1 vs. uniprot
Match: W0AH23_9SPHN (ATPase AAA n=2 Tax=Sphingomonas sanxanigenens TaxID=397260 RepID=W0AH23_9SPHN)

HSP 1 Score: 105 bits (261), Expect = 1.480e-19
Identity = 68/212 (32.08%), Postives = 106/212 (50.00%), Query Frame = 1
Query: 1168 YRSPDAREWIRLVERDFGGLGNDVATAVAAVGTVLRASEK-SRIGEDAGGGELTAPASGLLCHGPTGVGKTLLARSVAEHSGAPWFFLDCASVFRRDRGEAEQYVQDFLARAWACSPSVVVLDQVESICRRRPEAAGVTELQVLSVLLETMDRFRRPPSALRVFFLATCPDPAALDPSLLQRGRLEAVLQLGALDSAARASILGIHARDMLL 1800
            Y  P  R+   +   D GG+G+ +      V   LR  E   R+G D        P  G+L HGP G GKT LAR+VA  S A +F ++   +     GE+E+ ++D   +A   +PS+V +D+++SI  +R +  G  E ++++ LL  MD      +   +  +A    P A+D +L + GR +  + +G  D   R  ILGIH R M L
Sbjct:  191 YEEPHDRQRADVTYDDIGGMGDTIDQLREMVELPLRYPELFQRLGVD--------PPKGVLLHGPPGTGKTRLARAVANESDAEFFLINGPEIMGSAYGESEKRLRDVFEQATKAAPSIVFIDEIDSIAPKRGQVQGEAEKRLVAQLLTLMDGLE---ARANLVVIAATNRPEAIDEALRRPGRFDREIVVGVPDERGRREILGIHTRGMPL 391          
BLAST of mRNA_Ecto-sp13_S_contig13386.2707.1 vs. uniprot
Match: A0A5E4KRC4_9ARCH (VCP-like ATPase n=1 Tax=uncultured archaeon TaxID=115547 RepID=A0A5E4KRC4_9ARCH)

HSP 1 Score: 104 bits (260), Expect = 1.830e-19
Identity = 67/202 (33.17%), Postives = 108/202 (53.47%), Query Frame = 1
Query: 1198 RLVERDFGGLGNDVATAVAAVGTVLRASEK-SRIGEDAGGGELTAPASGLLCHGPTGVGKTLLARSVAEHSGAPWFFLDCASVFRRDRGEAEQYVQDFLARAWACSPSVVVLDQVESICRRRPEAAGVTELQVLSVLLETMDRFRRPPSALRVFFLATCPDPAALDPSLLQRGRLEAVLQLGALDSAARASILGIHARDMLL 1800
            R+   D GGLG++V      +   LR  E   R+G +A          G+L HGP G GKTLLA+++A  + A +  L    +  +  GE+E+ ++D   +A   +PS++++D+++SI  +R E  G  E +V++ LL  MD  +   +  +V  +     P ALDP+L + GR +  +++G  D  AR  IL IH R M L
Sbjct:  180 RVSYEDIGGLGDEVRKVREMIELPLRHPEIFERLGVEA--------PKGVLLHGPPGTGKTLLAKALASETNANFLTLSGPEIMSKFYGESEERLRDIFKQAEDNAPSIILIDEIDSIAPKREEVTGEVERRVVAQLLAVMDGLK---ARGKVVVIGATNRPHALDPALRRPGRFDREIEIGVPDRKARLEILQIHTRGMPL 370          
BLAST of mRNA_Ecto-sp13_S_contig13386.2707.1 vs. uniprot
Match: A0A0Q4PZQ1_9SPHN (AAA family ATPase n=22 Tax=Bacteria TaxID=2 RepID=A0A0Q4PZQ1_9SPHN)

HSP 1 Score: 104 bits (260), Expect = 1.940e-19
Identity = 68/213 (31.92%), Postives = 105/213 (49.30%), Query Frame = 1
Query: 1168 YRSPDAREWIRLVERDFGGLGNDVATAVAAVGTVLRASEK-SRIGEDAGGGELTAPASGLLCHGPTGVGKTLLARSVAEHSGAPWFFLDCASVFRRDRGEAEQYVQDFLARAWACSPSVVVLDQVESICRRRPEAAGVTELQVLSVLLETMDRFRRPPSALRVFFLATCPDPAALDPSLLQRGRLEAVLQLGALDSAARASILGIHARDMLLE 1803
            Y +P       +   D GG+G  +      V   LR  E   R+G D        P  G+L HGP G GKT LAR+VA  S A +F ++   +     GE+E+ +++    A   SPS+V +D+++SI  +R + +G  E ++++ LL  MD      S   +  +A    P A+D +L + GR +  + +G  D   R  ILGIH R M L+
Sbjct:  189 YETPRETRRADVTYDDIGGMGQTIDQLREMVELPLRYPELFQRLGVD--------PPKGVLLHGPPGTGKTRLARAVANESDAEFFLINGPEIMGSAYGESEKRLREVFEEATKASPSIVFIDEIDSIAPKRGQVSGEAEKRLVAQLLTLMDGLE---SRANIVVIAATNRPEAIDEALRRPGRFDREIVVGVPDERGRREILGIHTRGMPLD 390          
BLAST of mRNA_Ecto-sp13_S_contig13386.2707.1 vs. uniprot
Match: A0A3M9ZUH9_9ARCH (AAA family ATPase n=4 Tax=unclassified Nitrosopumilus TaxID=2619919 RepID=A0A3M9ZUH9_9ARCH)

HSP 1 Score: 104 bits (259), Expect = 2.330e-19
Identity = 67/203 (33.00%), Postives = 110/203 (54.19%), Query Frame = 1
Query: 1198 RLVERDFGGLGNDVATAVAAVGTVLRASEK-SRIGEDAGGGELTAPASGLLCHGPTGVGKTLLARSVAEHSGAPWFFLDCASVFRRDRGEAEQYVQDFLARAWACSPSVVVLDQVESICRRRPEAAGVTELQVLSVLLETMDRFRRPPSALRVFFLATCPDPAALDPSLLQRGRLEAVLQLGALDSAARASILGIHARDMLLE 1803
            R+   + GGL  +V      V   +R  E   +IG +A          G+L HGP G GKTL+A++VA  + A +  +    +  +  GE+E+ V++  A+A   SPS+V +D+++SI  +R E +G  E +++S LL  MD  +   S  +V  +A    P ++DP+L + GRL+  +++G  D+  R  IL IH R M L+
Sbjct:  173 RITYDELGGLKGEVQKIREMVELPMRHPELFEKIGVEA--------PKGILLHGPPGTGKTLIAKAVAGETNAHFISVSGPEIMGKHYGESEERVREIFAQAEENSPSIVFIDEIDSIAPKRDEVSGEVEKRIVSQLLTLMDGIK---SRGKVVVIAATNRPDSIDPALRRPGRLDREIEIGMPDAEGRHEILAIHTRGMPLD 364          
BLAST of mRNA_Ecto-sp13_S_contig13386.2707.1 vs. uniprot
Match: A0A3M9ZHC4_9ARCH (AAA family ATPase (Fragment) n=1 Tax=Thaumarchaeota archaeon S15 TaxID=2478559 RepID=A0A3M9ZHC4_9ARCH)

HSP 1 Score: 103 bits (257), Expect = 2.480e-19
Identity = 75/212 (35.38%), Postives = 110/212 (51.89%), Query Frame = 1
Query: 1171 RSPDAREWIRLVERDFGGLGNDVATAVAAVGTVLRASEK-SRIGEDAGGGELTAPASGLLCHGPTGVGKTLLARSVAEHSGAPWFFLDCASVFRRDRGEAEQYVQDFLARAWACSPSVVVLDQVESICRRRPEAAGVTELQVLSVLLETMDRFRRPPSALRVFFLATCPDPAALDPSLLQRGRLEAVLQLGALDSAARASILGIHARDMLLE 1803
            +S DA     +   D GG+   V      V   LR  E   R+G       + AP  G+L HGP G GKTLLAR+VA  + + +  L    +  R  GE+E+ ++     A   +PSV+ +D+++SI  +R EAAG  E +++S LL  MD     P   RV  +A    P ++DP+L + GR +  +++G  D+A R  IL IH R M LE
Sbjct:  167 QSVDAAARPTVTYDDLGGMREAVLRMREMVELPLRHPELFERVG-------IEAP-KGVLLHGPPGTGKTLLARAVAGETNSNFVHLSGPEIMARHYGESEERLRKVFKDAQDSAPSVIFIDELDSIAPKRDEAAGELERRIVSQLLTLMDGIA--PRG-RVVVIAATNRPDSIDPALRRPGRFDREIEIGVPDAAGRLEILNIHTRGMPLE 367          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13386.2707.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LB69_ECTSI4.080e-30585.81Cell division control protein n=2 Tax=Ectocarpus T... [more]
R9T831_METII6.210e-2133.50AAA family ATPase, CDC48 subfamily protein n=2 Tax... [more]
A0A841H0J3_9BACT7.080e-2133.33Transitional endoplasmic reticulum ATPase n=1 Tax=... [more]
UPI000369BADB1.120e-2033.00CDC48 family AAA ATPase n=1 Tax=Methanomassiliicoc... [more]
A0A3M9ZMD3_9ARCH1.030e-1935.85AAA family ATPase n=2 Tax=unclassified Thaumarchae... [more]
W0AH23_9SPHN1.480e-1932.08ATPase AAA n=2 Tax=Sphingomonas sanxanigenens TaxI... [more]
A0A5E4KRC4_9ARCH1.830e-1933.17VCP-like ATPase n=1 Tax=uncultured archaeon TaxID=... [more]
A0A0Q4PZQ1_9SPHN1.940e-1931.92AAA family ATPase n=22 Tax=Bacteria TaxID=2 RepID=... [more]
A0A3M9ZUH9_9ARCH2.330e-1933.00AAA family ATPase n=4 Tax=unclassified Nitrosopumi... [more]
A0A3M9ZHC4_9ARCH2.480e-1935.38AAA family ATPase (Fragment) n=1 Tax=Thaumarchaeot... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig13386contigEcto-sp13_S_contig13386:3..3797 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score879.8
Seed ortholog evalue9.3e-253
Seed eggNOG ortholog2880.D8LB69
Model size2306
KEGG koko:K13525
KEGG TC3.A.16.1
KEGG Pathwayko04141,ko05134,map04141,map05134
KEGG ModuleM00400,M00403
Hectar predicted targeting categorysignal peptide
Exons4
EggNOG free text desc.ATP binding
EggNOG OGsCOG0464@1,KOG0730@2759
Ec32 ortholog descriptionP-loop containing nucleoside triphosphate hydrolase
Ec32 orthologEc-27_004990.1
Cds size2304
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko03019,ko04131,ko04147
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462715.1512594-CDS-Ecto-sp13_S_contig13386:2..7161681462715.1512594-CDS-Ecto-sp13_S_contig13386:2..716Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig13386 3..716 -
1681462715.1627414-CDS-Ecto-sp13_S_contig13386:1061..11691681462715.1627414-CDS-Ecto-sp13_S_contig13386:1061..1169Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig13386 1062..1169 -
1681462715.1784728-CDS-Ecto-sp13_S_contig13386:1827..19211681462715.1784728-CDS-Ecto-sp13_S_contig13386:1827..1921Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig13386 1828..1921 -
1681462715.1916802-CDS-Ecto-sp13_S_contig13386:2409..37971681462715.1916802-CDS-Ecto-sp13_S_contig13386:2409..3797Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig13386 2410..3797 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig13386.2707.1prot_Ecto-sp13_S_contig13386.2707.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig13386 3..3797 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig13386.2707.1

>prot_Ecto-sp13_S_contig13386.2707.1 ID=prot_Ecto-sp13_S_contig13386.2707.1|Name=mRNA_Ecto-sp13_S_contig13386.2707.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=768bp
YSRPWTTKRRSLLLLCLDAGWMGPAIAAQEECSELLADVIGRPACLEEEL
ARDPISRGRSVLWLAAGCAASCSFVRSGVAQISLAQTPQRDGPAEAHTKR
FDDFRRVGVSKRGGSPRRLWVPVTVLALPRNSGSVPDKSQSSSSPAASRG
VSAASDKERREGSVADTHRCCPAALSPCLAEALGCCPTTAAAGTTGSSSG
GTRLSVRELPTDSIILASMVKLSGPYPVSASTGRPDLSAGIDDGRASLAA
VSSILPHALEGEVLAEGSVFSVTGLFALIVVEVCAEEQWRVPAGEVGSSG
GVVAVRVHGATELRLLRPTRSRRGGVAGPAESVGPLADGAAAVSSSEGAG
SVNARRSWQKSTDDKGVAAAEAEPSDTPATACLSSALQPYRSPDAREWIR
LVERDFGGLGNDVATAVAAVGTVLRASEKSRIGEDAGGGELTAPASGLLC
HGPTGVGKTLLARSVAEHSGAPWFFLDCASVFRRDRGEAEQYVQDFLARA
WACSPSVVVLDQVESICRRRPEAAGVTELQVLSVLLETMDRFRRPPSALR
VFFLATCPDPAALDPSLLQRGRLEAVLQLGALDSAARASILGIHARDMLL
EVLPSSPPLPSRPPPKPPVAAATAGAAMPPHPPYEEKTDVVGDESPVRLG
KPNRETAAAAAAATSASAVIALMPPAVPPPRTRDEFLKLVAARCHGYLGS
DLERLCREAAMSHFSVTTAAGAVDVVKGAGRHEAGGDLAATGGCGEGGGG
DKAGAPGVRLGDFWAALN
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mRNA from alignment at Ecto-sp13_S_contig13386:3..3797-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig13386.2707.1 ID=mRNA_Ecto-sp13_S_contig13386.2707.1|Name=mRNA_Ecto-sp13_S_contig13386.2707.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3795bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13386:3..3797- (Ectocarpus species13 EcNAP12_S_4_19m)
TACAGCCGCCCATGGACGACGAAGAGACGCAGTCTCTTGCTCCTGTGTCT CGATGCTGGATGGATGGGGCCAGCCATAGCAGCACAGGAAGAGTGCTCCG AACTGTTGGCCGACGTCATCGGGCGTCCGGCCTGCTTGGAGGAAGAGCTT GCGCGGGACCCTATCTCTCGTGGACGATCGGTCCTGTGGTTGGCAGCAGG TTGTGCCGCATCATGTTCCTTTGTCCGATCTGGGGTGGCACAGATATCGC TGGCGCAAACACCACAGAGGGATGGCCCAGCCGAAGCTCACACCAAAAGG TTTGATGATTTTCGCCGTGTAGGCGTCAGTAAAAGAGGCGGTTCGCCCCG CAGGCTGTGGGTGCCTGTGACAGTCCTCGCGCTTCCAAGGAACAGCGGCA GCGTGCCGGATAAGAGCCAATCTTCGTCGTCGCCTGCGGCGTCTCGTGGT GTTTCCGCCGCAAGCGACAAGGAGAGACGAGAAGGAAGCGTCGCCGACAC GCATCGCTGTTGCCCCGCTGCGTTGTCGCCCTGTCTCGCTGAGGCCCTGG GCTGTTGTCCAACGACGGCAGCAGCCGGCACAACCGGTAGCAGCAGCGGC GGTACGCGGTTGTCGGTGCGCGAGCTTCCGACTGATTCCATCATTCTCGC GTCCATGGTTAAGCTCAGCGGCCCGTACCCGGTGTCGGCGTCCACCGGAA GGCCCGACTTATCCGCCGGAATTGACGACGGCCGAGCTTCTCTGGCCGCA GTGTCCTCGATTTTGCCTCATGCGCTGGAAGGAGAGGTACTTGCCGAGGG CTCTGTGTTCAGCGTGACCGGTCTCTTCGCGCTGATCGTTGTCGAGGTGT GCGCAGAAGAGCAGTGGCGGGTGCCGGCGGGGGAGGTGGGCAGCTCCGGG GGTGTTGTTGCGGTGAGGGTGCACGGCGCCACCGAGCTGCGCCTGTTGCG GCCGACTCGATCGAGACGCGGCGGTGTCGCGGGCCCTGCCGAAAGCGTTG GCCCTCTTGCCGACGGTGCTGCTGCTGTGTCTTCCTCCGAGGGTGCTGGT TCGGTGAACGCCCGTCGCAGTTGGCAGAAATCAACCGACGATAAAGGCGT CGCAGCAGCAGAAGCAGAACCCTCCGACACCCCAGCCACCGCCTGTCTCT CCTCAGCGCTACAACCCTACCGCTCCCCCGATGCCAGGGAGTGGATCCGA CTGGTGGAACGAGACTTCGGCGGGCTCGGGAATGACGTCGCCACGGCTGT TGCTGCCGTAGGCACGGTTTTGAGGGCAAGTGAGAAAAGCCGCATCGGCG AGGACGCAGGGGGGGGTGAGCTAACGGCGCCTGCTAGTGGCCTGTTGTGT CACGGACCGACCGGAGTAGGCAAGACCCTCCTCGCCAGGTACGCGTGGGG CGTGCCCTCGTTAAGTTCAAGCTGTGTCCCACCTGCCGATGTTTGGTGTG TCTTATGTCGTTTGCGTGTGTTGGCGTGTCCCTTATCGTGGTTGGTGTTT GAAACCTGCTGCGGCTGCTGCTGCTGCTGCAGCCGCTAAGAGATAGACGA AGGCATATGTGTTTGTTTCGTGTGGGGTGCACTTTGGGGAAACGGGTCCG CCCGTGTCCCCGGGTTTCGCGTATCGTCGCGCGTGGAGGGCCCAGCTTGA TGGCTGCTGGGCAACAGCGATTCGCACAGCCATGTCAGTCTTTGCTGACG GAGCCGTTGAAATTGTCAGAGCAACCGAATCGTTTTCGTTGGTGCCTGAA CTACCTGTTGTCTGCAAGGTACCCGCGCCTCTCGCTGGGTGTAGCGAGTT GGCTGCTGCTTGTACGACAACGCTGAGTATGTACGAACAGGCCTTCGATC TAAACCATTTCCCGATCTGTCTCCAGATCAGTTGCGGAGCATTCTGGCGC ACCGTGGTTCTTCCTGGACTGTGCTTCCGTGTTCCGACGTGACCGTGGCG AGGCGGAGCAGTACGTGCAGGTATGTACCTTCTGTCTATGCGGCACAATC CGGTGGCATCGGCCGCTTCTTGGAAAATGATGCTCGTTTCGACTTGCACC TTTTTTCTGGGGTTAGATTGTGGCGGAGGAACTCGTTCCTGAGCCTATTT TGTGAGGAAGGAAGAGAAGGTACTGAGTAGAGGTCGGAACGGTGTCTAAT AGAGAGACAGCTACGTTGATTATTGCGTCCTTTCGTGCCATATCCGGGAC CTAGCGCATCCAGTACCCGGCAGTCGCCGTTCTCGGGCAGGTAAGGTTTG AAAGTTTCCCGACCGTCGTTGGCGATACAGCAGGTGCGGCGAATCAGGCA GGCAGATTTCCCGGAGCGCCGGGCAAGAAGCAATTACTCTCTCTCTCTCT CTCTTGCTCTCTCTCTCTTGCTCTCTACCCACGCACAACGCACCGAGCAA GATGGGAGCGTGACGATAAACGGTTTATTTACACGTCATGGCAGCCGGGC ATACAAGACACCGCCCGTGGCATGTCTCACCCCGGCGTGACTTCCAACTA AAAAATCGACTAGTCTCGGCTGTAACAACGACACAACTCCGTGCCCCACT GCCGGCTTTTTCTTATCATCGCTGCTCTGGCTGGTGGGTTGTGTTCGTTG CCCGTCCCGTCCACGCCTTCGGTGGCAGGATTTTTTGGCTAGGGCTTGGG CGTGCTCGCCGTCCGTGGTTGTCCTGGACCAGGTCGAGTCTATCTGCAGG AGACGCCCAGAGGCCGCGGGTGTCACAGAGCTACAGGTAAACGGAAGCAC GGACGCAGAGACGCACCGCTTACCATAAAAATTCAAGCTCAGCTGTCGTT ATGTTGTTCGTGTGTTGTCCGAGTTGACCTCTCGGCATGAGTTTTCTGTG GGTATCCAGAGGAGACAGCCGACTTACGTGAGAAAGCGAAGTATCCAACG AAGCATAGAGTAGTCGGTGAGGTTAAGGATGCCGTATGGTCCCGTTGCGT TGTGTAGGAGAGGGGTTGAGCCATCAACCGGAAACAACCGGATCAATCAT TATTATTGTCTACACAAAGTATTGCCTAGCCTCCACCCACCCACCCACCC ACCCCTGATCGCTGTGAACTTTTCCCCCAAGGTGCTCTCCGTGCTGCTCG AGACGATGGACCGGTTCCGCCGCCCGCCATCGGCGCTCCGCGTATTCTTC CTGGCCACGTGTCCAGACCCTGCCGCTCTCGACCCGTCCCTGCTCCAGCG GGGCCGCCTGGAGGCCGTACTCCAGCTGGGCGCATTGGACAGCGCCGCGC GCGCGTCCATCTTGGGCATCCACGCCCGGGACATGCTCCTCGAAGTGCTA CCGTCGTCGCCGCCGCTGCCGTCACGGCCGCCGCCTAAACCGCCGGTTGC TGCTGCAACAGCGGGCGCCGCAATGCCACCGCATCCTCCTTACGAAGAGA AGACAGACGTCGTCGGCGATGAATCGCCGGTTCGGTTGGGAAAACCAAAC AGGGAGACGGCGGCGGCGGCGGCGGCCGCTACGTCTGCATCTGCAGTTAT CGCATTGATGCCTCCCGCGGTTCCACCACCGCGGACAAGGGACGAGTTTC TTAAGCTAGTGGCCGCGAGGTGCCATGGATACCTGGGGTCCGACCTGGAG CGCTTGTGCCGCGAGGCGGCCATGAGCCACTTCTCGGTGACCACCGCTGC CGGCGCCGTCGACGTGGTGAAGGGTGCTGGACGTCACGAAGCGGGAGGGG ATTTGGCGGCTACTGGTGGATGTGGGGAGGGCGGAGGGGGCGACAAGGCC GGCGCGCCGGGAGTCCGATTGGGGGACTTTTGGGCGGCGTTGAAT
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig13386:3..3797-

>mRNA_Ecto-sp13_S_contig13386.2707.1 ID=mRNA_Ecto-sp13_S_contig13386.2707.1|Name=mRNA_Ecto-sp13_S_contig13386.2707.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=2304bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13386:3..3797- (Ectocarpus species13 EcNAP12_S_4_19m)
TACAGCCGCCCATGGACGACGAAGAGACGCAGTCTCTTGCTCCTGTGTCT
CGATGCTGGATGGATGGGGCCAGCCATAGCAGCACAGGAAGAGTGCTCCG
AACTGTTGGCCGACGTCATCGGGCGTCCGGCCTGCTTGGAGGAAGAGCTT
GCGCGGGACCCTATCTCTCGTGGACGATCGGTCCTGTGGTTGGCAGCAGG
TTGTGCCGCATCATGTTCCTTTGTCCGATCTGGGGTGGCACAGATATCGC
TGGCGCAAACACCACAGAGGGATGGCCCAGCCGAAGCTCACACCAAAAGG
TTTGATGATTTTCGCCGTGTAGGCGTCAGTAAAAGAGGCGGTTCGCCCCG
CAGGCTGTGGGTGCCTGTGACAGTCCTCGCGCTTCCAAGGAACAGCGGCA
GCGTGCCGGATAAGAGCCAATCTTCGTCGTCGCCTGCGGCGTCTCGTGGT
GTTTCCGCCGCAAGCGACAAGGAGAGACGAGAAGGAAGCGTCGCCGACAC
GCATCGCTGTTGCCCCGCTGCGTTGTCGCCCTGTCTCGCTGAGGCCCTGG
GCTGTTGTCCAACGACGGCAGCAGCCGGCACAACCGGTAGCAGCAGCGGC
GGTACGCGGTTGTCGGTGCGCGAGCTTCCGACTGATTCCATCATTCTCGC
GTCCATGGTTAAGCTCAGCGGCCCGTACCCGGTGTCGGCGTCCACCGGAA
GGCCCGACTTATCCGCCGGAATTGACGACGGCCGAGCTTCTCTGGCCGCA
GTGTCCTCGATTTTGCCTCATGCGCTGGAAGGAGAGGTACTTGCCGAGGG
CTCTGTGTTCAGCGTGACCGGTCTCTTCGCGCTGATCGTTGTCGAGGTGT
GCGCAGAAGAGCAGTGGCGGGTGCCGGCGGGGGAGGTGGGCAGCTCCGGG
GGTGTTGTTGCGGTGAGGGTGCACGGCGCCACCGAGCTGCGCCTGTTGCG
GCCGACTCGATCGAGACGCGGCGGTGTCGCGGGCCCTGCCGAAAGCGTTG
GCCCTCTTGCCGACGGTGCTGCTGCTGTGTCTTCCTCCGAGGGTGCTGGT
TCGGTGAACGCCCGTCGCAGTTGGCAGAAATCAACCGACGATAAAGGCGT
CGCAGCAGCAGAAGCAGAACCCTCCGACACCCCAGCCACCGCCTGTCTCT
CCTCAGCGCTACAACCCTACCGCTCCCCCGATGCCAGGGAGTGGATCCGA
CTGGTGGAACGAGACTTCGGCGGGCTCGGGAATGACGTCGCCACGGCTGT
TGCTGCCGTAGGCACGGTTTTGAGGGCAAGTGAGAAAAGCCGCATCGGCG
AGGACGCAGGGGGGGGTGAGCTAACGGCGCCTGCTAGTGGCCTGTTGTGT
CACGGACCGACCGGAGTAGGCAAGACCCTCCTCGCCAGATCAGTTGCGGA
GCATTCTGGCGCACCGTGGTTCTTCCTGGACTGTGCTTCCGTGTTCCGAC
GTGACCGTGGCGAGGCGGAGCAGTACGTGCAGGATTTTTTGGCTAGGGCT
TGGGCGTGCTCGCCGTCCGTGGTTGTCCTGGACCAGGTCGAGTCTATCTG
CAGGAGACGCCCAGAGGCCGCGGGTGTCACAGAGCTACAGGTGCTCTCCG
TGCTGCTCGAGACGATGGACCGGTTCCGCCGCCCGCCATCGGCGCTCCGC
GTATTCTTCCTGGCCACGTGTCCAGACCCTGCCGCTCTCGACCCGTCCCT
GCTCCAGCGGGGCCGCCTGGAGGCCGTACTCCAGCTGGGCGCATTGGACA
GCGCCGCGCGCGCGTCCATCTTGGGCATCCACGCCCGGGACATGCTCCTC
GAAGTGCTACCGTCGTCGCCGCCGCTGCCGTCACGGCCGCCGCCTAAACC
GCCGGTTGCTGCTGCAACAGCGGGCGCCGCAATGCCACCGCATCCTCCTT
ACGAAGAGAAGACAGACGTCGTCGGCGATGAATCGCCGGTTCGGTTGGGA
AAACCAAACAGGGAGACGGCGGCGGCGGCGGCGGCCGCTACGTCTGCATC
TGCAGTTATCGCATTGATGCCTCCCGCGGTTCCACCACCGCGGACAAGGG
ACGAGTTTCTTAAGCTAGTGGCCGCGAGGTGCCATGGATACCTGGGGTCC
GACCTGGAGCGCTTGTGCCGCGAGGCGGCCATGAGCCACTTCTCGGTGAC
CACCGCTGCCGGCGCCGTCGACGTGGTGAAGGGTGCTGGACGTCACGAAG
CGGGAGGGGATTTGGCGGCTACTGGTGGATGTGGGGAGGGCGGAGGGGGC
GACAAGGCCGGCGCGCCGGGAGTCCGATTGGGGGACTTTTGGGCGGCGTT
GAAT
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