mRNA_Ecto-sp13_S_contig13380.2702.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig13380.2702.1
Unique NamemRNA_Ecto-sp13_S_contig13380.2702.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig13380.2702.1 vs. uniprot
Match: D8LE15_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LE15_ECTSI)

HSP 1 Score: 308 bits (788), Expect = 1.030e-98
Identity = 157/158 (99.37%), Postives = 157/158 (99.37%), Query Frame = 2 
Query:    2 RGKTVLAEFTFTTGNFPTITRVLLGKIAPEDGKMSYVYDQYVFHYRVDDGLTFLCMADEDSRRRIPFAFLQEIKNRFQATYGDRGATAAAFAMNEDFSRTLENQMDVFNSPDGDQVLATQQKLDEVKDVMVASVELVLERGERLELLVDKTDNLQQQV 475
            RGKTVLAEFTFTTGNFPTITRVLLGKIAPEDGKMSYVYDQYVFHYRVDDGLTFLCMADEDSRRRIPFAFLQEIKNRFQATYGDRGATAAAFAMNEDFSRTLENQMDVFNSPDGDQVLATQQKLDEVKDVMVASVELVLERGERLELLVDKTDNLQQQ 
Sbjct:   10 RGKTVLAEFTFTTGNFPTITRVLLGKIAPEDGKMSYVYDQYVFHYRVDDGLTFLCMADEDSRRRIPFAFLQEIKNRFQATYGDRGATAAAFAMNEDFSRTLENQMDVFNSPDGDQVLATQQKLDEVKDVMVASVELVLERGERLELLVDKTDNLQQQA 167
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BLAST of mRNA_Ecto-sp13_S_contig13380.2702.1 vs. uniprot
Match: A0A8J2SHF1_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SHF1_9STRA)

HSP 1 Score: 220 bits (561), Expect = 7.400e-65
Identity = 107/155 (69.03%), Postives = 129/155 (83.23%), Query Frame = 2 
Query:    2 RGKTVLAEFTFTTGNFPTITRVLLGKIAPEDGKMSYVYDQYVFHYRVDDGLTFLCMADEDSRRRIPFAFLQEIKNRFQATYGDRGATAAAFAMNEDFSRTLENQMDVFNSPDGDQVLATQQKLDEVKDVMVASVELVLERGERLELLVDKTDNLQ 466
            R   VLAE+TFT+GNFPTITRVLLGKI PEDGKMSYVYDQYVFHY V+  LTFLCMADE  +RR+PFAFL ++K R+ ATYGDRG+TA AFAMNEDF RTL+ Q++ +N P+ DQ     +KLD+VK VMV ++E+VLERGE+LELLVDK++ LQ
Sbjct:   10 RQNVVLAEYTFTSGNFPTITRVLLGKIPPEDGKMSYVYDQYVFHYVVEKQLTFLCMADESFKRRVPFAFLDDVKERWFATYGDRGSTAIAFAMNEDFGRTLKKQVEFYNGPEADQFATVHKKLDDVKSVMVQNIEMVLERGEKLELLVDKSEQLQ 164
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BLAST of mRNA_Ecto-sp13_S_contig13380.2702.1 vs. uniprot
Match: A0A7S2UV86_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UV86_9STRA)

HSP 1 Score: 219 bits (558), Expect = 1.860e-64
Identity = 107/158 (67.72%), Postives = 128/158 (81.01%), Query Frame = 2 
Query:    2 RGKTVLAEFTFTTGNFPTITRVLLGKIAPEDGKMSYVYDQYVFHYRVDDGLTFLCMADEDSRRRIPFAFLQEIKNRFQATYGDRGATAAAFAMNEDFSRTLENQMDVFNSPDGDQVLATQQKLDEVKDVMVASVELVLERGERLELLVDKTDNLQQQV 475
            RGK VLAE+T+T+GNFPTITRVLL KI   D KMSYVYDQYVFHY V+DG+T+LCMA+E  RRR+PF FL EIKNRF A YG R  TA AFAMNEDF R ++ QMD+FN PD DQ  +  ++LD+V++VMV ++E+VLERGE+LELLVDKTD LQ Q 
Sbjct:   10 RGKVVLAEYTWTSGNFPTITRVLLAKIPSSDAKMSYVYDQYVFHYVVEDGITYLCMAEESDRRRLPFTFLDEIKNRFLAQYGQRIHTAIAFAMNEDFGRVIQKQMDLFNQPDADQFASLHKQLDDVRNVMVQNIEMVLERGEKLELLVDKTDQLQNQA 167
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BLAST of mRNA_Ecto-sp13_S_contig13380.2702.1 vs. uniprot
Match: F0XY91_AURAN (Uncharacterized protein n=2 Tax=Pelagomonadales TaxID=54409 RepID=F0XY91_AURAN)

HSP 1 Score: 219 bits (557), Expect = 2.970e-64
Identity = 104/155 (67.10%), Postives = 129/155 (83.23%), Query Frame = 2 
Query:    2 RGKTVLAEFTFTTGNFPTITRVLLGKIAPEDGKMSYVYDQYVFHYRVDDGLTFLCMADEDSRRRIPFAFLQEIKNRFQATYGDRGATAAAFAMNEDFSRTLENQMDVFNSPDGDQVLATQQKLDEVKDVMVASVELVLERGERLELLVDKTDNLQ 466
            RG TVLAE+TFT+GNFPTITRVLLGKI  +DGKMSYVYDQYVFHY V++ +TFLCMADE  +RR+PFAFL ++KNRF ATYGD+G  A AFA NEDF RT++ Q++ +N P  DQ     +KLD+VK+VMV ++E+VLERGE+LELLVDK++ LQ
Sbjct:   10 RGNTVLAEYTFTSGNFPTITRVLLGKIPEQDGKMSYVYDQYVFHYVVENKMTFLCMADESFKRRVPFAFLDDVKNRFFATYGDKGQAAIAFAYNEDFGRTIQKQLEFYNGPQADQFATVHKKLDDVKNVMVQNIEMVLERGEKLELLVDKSEQLQ 164
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BLAST of mRNA_Ecto-sp13_S_contig13380.2702.1 vs. uniprot
Match: A0A7S2SQH3_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SQH3_9STRA)

HSP 1 Score: 216 bits (551), Expect = 3.680e-63
Identity = 105/157 (66.88%), Postives = 132/157 (84.08%), Query Frame = 2 
Query:    2 RGKTVLAEFTFTTGNFPTITRVLLGKIAPEDGKMSYVYDQYVFHYRVDDGLTFLCMADE--DSRRRIPFAFLQEIKNRFQATYGDRGATAAAFAMNEDFSRTLENQMDVFNSPDGDQVLATQQKLDEVKDVMVASVELVLERGERLELLVDKTDNLQ 466
            RGKTVLAEFTFT+GNFP ITRVLLGKI+ +DGKMSYVYDQ+VFHY V DG+ ++CM D+  D +RR+PF+FL++IKNRF A+YGD   TA AFAMNE+F RTL+ QM+ FN P+ DQ  A  QK+++VK+VMV ++E+VLERGE+LELLVDKT+ LQ
Sbjct:   25 RGKTVLAEFTFTSGNFPQITRVLLGKISNDDGKMSYVYDQHVFHYIVADGIVYMCMCDDPQDGKRRLPFSFLEDIKNRFVASYGDAAQTAIAFAMNEEFGRTLQKQMEFFNGPNADQFTAVNQKMEDVKNVMVQNIEMVLERGEKLELLVDKTEQLQ 181
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BLAST of mRNA_Ecto-sp13_S_contig13380.2702.1 vs. uniprot
Match: A0A7S2DAW8_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DAW8_9STRA)

HSP 1 Score: 216 bits (549), Expect = 4.940e-63
Identity = 105/157 (66.88%), Postives = 131/157 (83.44%), Query Frame = 2 
Query:    2 RGKTVLAEFTFTTGNFPTITRVLLGKIAPEDGKMSYVYDQYVFHYRVDDGLTFLCMADE--DSRRRIPFAFLQEIKNRFQATYGDRGATAAAFAMNEDFSRTLENQMDVFNSPDGDQVLATQQKLDEVKDVMVASVELVLERGERLELLVDKTDNLQ 466
            RGKTVLAEFTFT+GNFP ITRVLLGKI+ +DGKMSYVYDQYVFHY V+DGLTFLCMAD+  + +RRIP+AFL++IK+RF ATYG+   TA AF MN+ F RTL+ QM+ FN P  DQ+    +K+++VK+VMV ++E+VLERGE+LELLVDKT+  Q
Sbjct:   10 RGKTVLAEFTFTSGNFPQITRVLLGKISSDDGKMSYVYDQYVFHYMVEDGLTFLCMADDAVEGKRRIPYAFLEDIKSRFMATYGESAQTAIAFEMNQHFGRTLQKQMEFFNGPQADQLSEVTKKIEDVKNVMVQNIEMVLERGEKLELLVDKTEQFQ 166
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BLAST of mRNA_Ecto-sp13_S_contig13380.2702.1 vs. uniprot
Match: A0A6V1IS43_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1IS43_HETAK)

HSP 1 Score: 213 bits (543), Expect = 2.920e-62
Identity = 105/159 (66.04%), Postives = 130/159 (81.76%), Query Frame = 2 
Query:    2 RGKTVLAEFTFTTGNFPTITRVLLGKIAPE-DGKMSYVYDQYVFHYRVDDGLTFLCMADEDSRRRIPFAFLQEIKNRFQATYGDRGATAAAFAMNEDFSRTLENQMDVFNSPDGDQVLATQQKLDEVKDVMVASVELVLERGERLELLVDKTDNLQQQV 475
            R KTVLAE T T+GNFPTITRVLLGKI  + D KMSYVYDQYVFHY V  G T+LCMAD++++RR+PFAFL++IKNRFQATYGD   TA A+AMNEDF RTL+ +M+ FN P+ DQ  +  +KLD+VK +MV ++E+VLERGE+LELLVDK++ L QQ 
Sbjct:   10 REKTVLAEHTSTSGNFPTITRVLLGKIVSDADSKMSYVYDQYVFHYLVSSGFTYLCMADDNTKRRLPFAFLEDIKNRFQATYGDSARTAIAYAMNEDFGRTLQGRMNFFNGPEADQYSSVNKKLDDVKSIMVQNIEMVLERGEKLELLVDKSEQLSQQA 168
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BLAST of mRNA_Ecto-sp13_S_contig13380.2702.1 vs. uniprot
Match: A0A812V998_SYMMI (Vamp7B protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812V998_SYMMI)

HSP 1 Score: 212 bits (540), Expect = 8.900e-62
Identity = 105/158 (66.46%), Postives = 125/158 (79.11%), Query Frame = 2 
Query:    2 RGKTVLAEFTFTTGNFPTITRVLLGKIAPEDGKMSYVYDQYVFHYRVDDGLTFLCMADEDSRRRIPFAFLQEIKNRFQATYGDRGATAAAFAMNEDFSRTLENQMDVFNSPDGDQVLATQQKLDEVKDVMVASVELVLERGERLELLVDKTDNLQQQV 475
            RGKTVLAE+TFT+GNFPTITRVLL KI  +DGKMSYVYDQ+VFHY V+D + +LCM D+ S+RRIPF FL +IK RF +TYG R  TA AFAMNEDF RTL+ Q+D +N P  D       KLD+VK+VMV ++E+VLERGE+LELLVDKTD LQ Q 
Sbjct:   10 RGKTVLAEYTFTSGNFPTITRVLLAKIPEQDGKMSYVYDQHVFHYIVEDKIIYLCMCDDMSKRRIPFGFLDDIKQRFTSTYGGRVHTAIAFAMNEDFGRTLQKQIDFYNGPSADTFAQVNSKLDDVKNVMVQNIEMVLERGEKLELLVDKTDKLQNQA 167
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BLAST of mRNA_Ecto-sp13_S_contig13380.2702.1 vs. uniprot
Match: A0A7S3GNR1_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GNR1_9STRA)

HSP 1 Score: 207 bits (526), Expect = 8.950e-60
Identity = 102/158 (64.56%), Postives = 124/158 (78.48%), Query Frame = 2 
Query:    2 RGKTVLAEFTFTTGNFPTITRVLLGKIAPEDGKMSYVYDQYVFHYRVDDGLTFLCMADEDSRRRIPFAFLQEIKNRFQATYGDRGATAAAFAMNEDFSRTLENQMDVFNSPDGDQVLATQQKLDEVKDVMVASVELVLERGERLELLVDKTDNLQQQV 475
            RGKTVLAE+T T+GNFPTITRVLLGKI  +D KMSYVYDQYVFHY V++ +T++CM D+  +RRIPF FL++IK RFQATYG+R  TA AFAM+EDF RT+  QMD  N    D       KLD+VK++MV ++E+VLERGE+LELLVDKTD LQ Q 
Sbjct:   10 RGKTVLAEYTSTSGNFPTITRVLLGKIEDKDMKMSYVYDQYVFHYIVENHITYMCMCDDMEKRRIPFGFLEDIKQRFQATYGERAQTAIAFAMSEDFGRTMHKQMDFHNGSGADAFAQVNTKLDDVKNIMVQNIEMVLERGEKLELLVDKTDKLQSQA 167
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BLAST of mRNA_Ecto-sp13_S_contig13380.2702.1 vs. uniprot
Match: A0A485L4B2_9STRA (Aste57867_15535 protein n=7 Tax=Aphanomyces TaxID=100860 RepID=A0A485L4B2_9STRA)

HSP 1 Score: 205 bits (522), Expect = 4.900e-59
Identity = 100/158 (63.29%), Postives = 126/158 (79.75%), Query Frame = 2 
Query:    2 RGKTVLAEFTFTTGNFPTITRVLLGKIAPEDGKMSYVYDQYVFHYRVDDGLTFLCMADEDSRRRIPFAFLQEIKNRFQATYGDRGATAAAFAMNEDFSRTLENQMDVFN-SPDGDQVLATQQKLDEVKDVMVASVELVLERGERLELLVDKTDNLQQQ 472
            RGKTVLAE+T ++GNFPT+TRVLL KI  ED KMSYVYDQ++FHY V DG+T+LCMAD D +RR+PF FL+++KNRF ATYG+RG TA AFAMN +F   ++ QM+ +N SP+ D V   QQ LD+VKD MV ++E VL+RGE+ ELLVD+TD L QQ
Sbjct:   10 RGKTVLAEYTASSGNFPTVTRVLLAKIPTEDSKMSYVYDQHIFHYVVADGITYLCMADNDFKRRVPFQFLEDLKNRFLATYGERGQTAIAFAMNAEFQHVIQRQMEYYNASPEVDTVARVQQSLDDVKDAMVENIEKVLDRGEKFELLVDRTDKLSQQ 167
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13380.2702.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LE15_ECTSI1.030e-9899.37Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A8J2SHF1_9STRA7.400e-6569.03Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S2UV86_9STRA1.860e-6467.72Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
F0XY91_AURAN2.970e-6467.10Uncharacterized protein n=2 Tax=Pelagomonadales Ta... [more]
A0A7S2SQH3_9STRA3.680e-6366.88Hypothetical protein n=2 Tax=Rhizochromulina marin... [more]
A0A7S2DAW8_9STRA4.940e-6366.88Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A6V1IS43_HETAK2.920e-6266.04Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A812V998_SYMMI8.900e-6266.46Vamp7B protein n=1 Tax=Symbiodinium microadriaticu... [more]
A0A7S3GNR1_9STRA8.950e-6064.56Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A485L4B2_9STRA4.900e-5963.29Aste57867_15535 protein n=7 Tax=Aphanomyces TaxID=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig13380contigEcto-sp13_S_contig13380:476..4481 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score245.4
Seed ortholog evalue1.6e-62
Seed eggNOG ortholog2880.D8LE15
Preferred nameVAMP7
Model size1725
KEGG koko:K08511,ko:K08515
KEGG Pathwayko04130,map04130
Hectar predicted targeting categoryother localisation
GOsGO:0000149,GO:0000288,GO:0000323,GO:0000932,GO:0000956,GO:0001101,GO:0001775,GO:0001906,GO:0001909,GO:0002228,GO:0002252,GO:0002263,GO:0002274,GO:0002275,GO:0002278,GO:0002283,GO:0002285,GO:0002323,GO:0002366,GO:0002376,GO:0002443,GO:0002444,GO:0002446,GO:0002447,GO:0002449,GO:0002682,GO:0002684,GO:0002694,GO:0002696,GO:0002697,GO:0002699,GO:0002703,GO:0002705,GO:0002886,GO:0002888,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0005484,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005764,GO:0005765,GO:0005766,GO:0005767,GO:0005768,GO:0005770,GO:0005773,GO:0005774,GO:0005776,GO:0005783,GO:0005789,GO:0005794,GO:0005802,GO:0005886,GO:0006139,GO:0006259,GO:0006355,GO:0006401,GO:0006402,GO:0006417,GO:0006725,GO:0006807,GO:0006810,GO:0006869,GO:0006887,GO:0006888,GO:0006892,GO:0006893,GO:0006897,GO:0006906,GO:0006909,GO:0006911,GO:0006914,GO:0006928,GO:0006950,GO:0006952,GO:0006955,GO:0006970,GO:0006996,GO:0007017,GO:0007018,GO:0007034,GO:0007041,GO:0007275,GO:0007399,GO:0008021,GO:0008104,GO:0008150,GO:0008152,GO:0008333,GO:0009056,GO:0009057,GO:0009628,GO:0009651,GO:0009719,GO:0009725,GO:0009737,GO:0009889,GO:0009890,GO:0009892,GO:0009986,GO:0009987,GO:0010008,GO:0010033,GO:0010118,GO:0010324,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0010646,GO:0010647,GO:0010720,GO:0010769,GO:0010770,GO:0010817,GO:0010876,GO:0010970,GO:0010975,GO:0010976,GO:0012505,GO:0012506,GO:0015031,GO:0015074,GO:0015833,GO:0016020,GO:0016021,GO:0016043,GO:0016050,GO:0016070,GO:0016071,GO:0016192,GO:0016236,GO:0017148,GO:0017156,GO:0017157,GO:0019219,GO:0019222,GO:0019439,GO:0019905,GO:0022008,GO:0022411,GO:0022603,GO:0022604,GO:0022607,GO:0023051,GO:0023056,GO:0030014,GO:0030015,GO:0030027,GO:0030101,GO:0030133,GO:0030135,GO:0030136,GO:0030139,GO:0030141,GO:0030154,GO:0030285,GO:0030658,GO:0030659,GO:0030662,GO:0030665,GO:0030666,GO:0030667,GO:0030670,GO:0030672,GO:0030705,GO:0030897,GO:0031090,GO:0031091,GO:0031143,GO:0031201,GO:0031224,GO:0031252,GO:0031300,GO:0031301,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031344,GO:0031346,GO:0031347,GO:0031349,GO:0031410,GO:0031902,GO:0031982,GO:0031984,GO:0032101,GO:0032103,GO:0032268,GO:0032269,GO:0032386,GO:0032388,GO:0032501,GO:0032502,GO:0032879,GO:0032880,GO:0032940,GO:0032984,GO:0032991,GO:0033003,GO:0033005,GO:0033006,GO:0033008,GO:0033036,GO:0033157,GO:0033993,GO:0034196,GO:0034197,GO:0034248,GO:0034249,GO:0034613,GO:0034622,GO:0034641,GO:0034655,GO:0035493,GO:0035577,GO:0035770,GO:0036230,GO:0036464,GO:0042119,GO:0042175,GO:0042221,GO:0042267,GO:0042582,GO:0042886,GO:0042995,GO:0043001,GO:0043005,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043269,GO:0043270,GO:0043299,GO:0043300,GO:0043302,GO:0043304,GO:0043306,GO:0043307,GO:0043308,GO:0043312,GO:0043320,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044422,GO:0044424,GO:0044425,GO:0044431,GO:0044432,GO:0044433,GO:0044437,GO:0044440,GO:0044444,GO:0044446,GO:0044456,GO:0044464,GO:0044754,GO:0045055,GO:0045087,GO:0045177,GO:0045184,GO:0045202,GO:0045321,GO:0045335,GO:0045595,GO:0045597,GO:0045664,GO:0045666,GO:0045921,GO:0046483,GO:0046649,GO:0046700,GO:0046883,GO:0046887,GO:0046903,GO:0046907,GO:0047496,GO:0048193,GO:0048280,GO:0048284,GO:0048471,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0048699,GO:0048731,GO:0048814,GO:0048856,GO:0048869,GO:0050727,GO:0050729,GO:0050767,GO:0050769,GO:0050773,GO:0050775,GO:0050776,GO:0050778,GO:0050789,GO:0050793,GO:0050794,GO:0050865,GO:0050867,GO:0050896,GO:0051046,GO:0051047,GO:0051049,GO:0051050,GO:0051094,GO:0051128,GO:0051130,GO:0051171,GO:0051172,GO:0051179,GO:0051223,GO:0051234,GO:0051239,GO:0051240,GO:0051246,GO:0051248,GO:0051252,GO:0051588,GO:0051590,GO:0051640,GO:0051641,GO:0051648,GO:0051649,GO:0051650,GO:0051656,GO:0051960,GO:0051962,GO:0060255,GO:0060284,GO:0060341,GO:0060627,GO:0061024,GO:0061025,GO:0061919,GO:0061951,GO:0065003,GO:0065007,GO:0065008,GO:0070201,GO:0070382,GO:0070727,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0071944,GO:0072384,GO:0072657,GO:0072659,GO:0080090,GO:0080134,GO:0090087,GO:0090150,GO:0090174,GO:0090304,GO:0090313,GO:0097159,GO:0097305,GO:0097352,GO:0097458,GO:0097708,GO:0098563,GO:0098588,GO:0098657,GO:0098791,GO:0098793,GO:0098796,GO:0098805,GO:0098827,GO:0098852,GO:0098876,GO:0099023,GO:0099024,GO:0099111,GO:0099501,GO:0099503,GO:0099518,GO:0120025,GO:0120035,GO:1900006,GO:1900483,GO:1901360,GO:1901361,GO:1901363,GO:1901575,GO:1901700,GO:1903305,GO:1903307,GO:1903335,GO:1903506,GO:1903530,GO:1903532,GO:1903533,GO:1903593,GO:1903595,GO:1903827,GO:1905475,GO:1990778,GO:1990904,GO:2000026,GO:2000112,GO:2000113,GO:2001141
Exons4
EggNOG free text desc.SNAP receptor activity
EggNOG OGsCOG5143@1,KOG0859@2759
Ec32 ortholog descriptionSynaptobrevin
Ec32 orthologEc-05_004420.1
Cds size405
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko04131,ko04147
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig13380.2702.1prot_Ecto-sp13_S_contig13380.2702.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig13380 576..3261 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462714.9048705-UTR-Ecto-sp13_S_contig13380:475..5751681462714.9048705-UTR-Ecto-sp13_S_contig13380:475..575Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig13380 476..575 +
1681462714.9557111-UTR-Ecto-sp13_S_contig13380:3261..44811681462714.9557111-UTR-Ecto-sp13_S_contig13380:3261..4481Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig13380 3262..4481 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462714.9169226-CDS-Ecto-sp13_S_contig13380:575..5951681462714.9169226-CDS-Ecto-sp13_S_contig13380:575..595Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig13380 576..595 +
1681462714.925705-CDS-Ecto-sp13_S_contig13380:1966..20981681462714.925705-CDS-Ecto-sp13_S_contig13380:1966..2098Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig13380 1967..2098 +
1681462714.934261-CDS-Ecto-sp13_S_contig13380:2627..27211681462714.934261-CDS-Ecto-sp13_S_contig13380:2627..2721Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig13380 2628..2721 +
1681462714.9452288-CDS-Ecto-sp13_S_contig13380:3102..32611681462714.9452288-CDS-Ecto-sp13_S_contig13380:3102..3261Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig13380 3103..3261 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig13380.2702.1

>prot_Ecto-sp13_S_contig13380.2702.1 ID=prot_Ecto-sp13_S_contig13380.2702.1|Name=mRNA_Ecto-sp13_S_contig13380.2702.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=135bp
MSYVYDQYVFHYRVDDGLTFLCMADEDSRRRIPFAFLQEIKNRFQATYGD
RGATAAAFAMNEDFSRTLENQMDVFNSPDGDQVLATQQKLDEVKDVMVAS
VELVLERGERLELLVDKTDNLQQQVSSRHQSIVR*
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mRNA from alignment at Ecto-sp13_S_contig13380:476..4481+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig13380.2702.1 ID=mRNA_Ecto-sp13_S_contig13380.2702.1|Name=mRNA_Ecto-sp13_S_contig13380.2702.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4006bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13380:476..4481+ (Ectocarpus species13 EcNAP12_S_4_19m)
GAGGGGTAAGACGGTGCTCGCGGAGTTCACCTTCACCACGGGCAACTTCC
CGACGATCACGCGCGTTTTGCTTGGCAAGATTGCGCCGGAGGATGGCAAG
ATGTCGTACGTCTACGACCAGTGAGTACCGCGCGCACGAGTACGGCGTGG
TTAATAGGGTGACGAGGATTTACCTTCTTTTTTGAGAGGCCGCCTCGGTT
TTGAAGCGGTACTCCCTCCTTGCCTGTCTTCTCCGCCCTTGTTCCGTCTC
TCTGCTCTCTCCTCCCCCCGGTCTCCACTTGTATCTCTATGTTTATCTCT
ACCTACCTCTCTCCCTCCCTCTCCCTCTCTCTCCCCTCCCTCTCTATCTG
TCTCTCTCCCTTTGTCTCTCCCTCCCTCCCTCCCTCCCTCTCAGTTGGCG
GTGCTTGAGTCGTGTTCATCGTTTTATAGCTGAGCGCAAGCATGTGGGTA
ACGCATTGATCGCAAACCTGATCCTCTTTTGTCCGTCAAGGGTCGTCGCC
GCCTTCCGTGTGTCATGTTTTTCTTCGCTTGTGGCTGTTTTGGGATTGCC
GTGCGGTGCAGATTCGTTAGGCGTCCCATTGCGAGCTCGGCGACATGTGA
TGGTGTTGAAGCGTGATTGCATGGCTTCATCTCCTAGCGCGTAAGCACAC
GAAATACAGCAACTTGTTTTTCCGTCTCGGCCCGCCTTCACGGAGAGCTG
CTTCAACTCCACACCACAACCGGAGCTGAGCTCGCCCGAAACATCGATTA
CGCTACCTCTTCTGCTCCACCTTCCTCGCGTTCACCCCGCTGTGGCTTGC
GATATTGTCTGGAATATTCGCCTCCGCGATGATGCGGGCGTTTCTGTAGT
GTAGAATCAGTTTCTTCATATGTTCTGTTTAATGCCGCGAAGCGATACTC
CCACTAAGCTGGACGCGTGTCGTAGCGTATGACACGTGTCTAGCTTAGTA
GGAGTATCGCTTCGCGGCGATAGGCAGAACAGGTGAAGGAACCAAACCTT
CATTTCCAAAACGCCCGCATCATGGCGGAGGGCGATCCCCCGTATCGAAG
AGACAAGATGGTCAACCGCAGGGTAGAAGCGTGTACCTGCTTCAAAGTCC
CCAAACATTCGACTCGCATGTATTCAAGCAGACTTTTACAACAATAAGCA
TAACGACAGTTAAACTATCAAAGCAAAAAGCCCAATCAACATGGAAAGAA
TCAGATTCTAACCAAGGCATTAAATATAAGTACGTAGAGCTTCCCCCTTG
GCTCACCTCCTGCATGGAGCAGCACGCTGCTGCTGCTGCTGCTGCTGCTG
CTGCTGCTGCTGCTGCTGCTTGGCGTTGCATGACGATGGCAACCTGTGAT
CGCTTTTAGCACCACGAAGCTGATCATCACTGGTTCGGGAAAAATGAAAC
ATGCTTGGCGATGCTGCTCGTGCTCTTGTTGCTCGTCTAATCTTAAAAAC
GTGCGTGCGCGTGCGCCGTGTGCGTGCCCCCCTCCCCAAAGGTACGTCTT
CCACTACCGAGTAGACGACGGGCTAACTTTCCTGTGCATGGCGGACGAGG
ACAGCCGCCGGCGGATACCCTTCGCCTTCCTGCAAGAAATCAAGAACCGG
TTCCAGGCTACGTACGGGGATAGGTGCGTCACGTGAGATTGTTTGTTTGC
TTGTTTGTACGAAGGTGGTGGGAAGGCGTTTCTGTTGACGGGTTATTTAC
TAGTGTTGGGAGTCGTGCCGCAGCACCACCGTCTGTTCTCCGAGTGTTGT
GGCCGCGTTGGTGTTCACCGTACACGTGCCATGGCGCATCAAATTTTCTT
TGAGATCCCCCCCCCCCTCCTCCCTCAGACTCGCACTTTGGCTCTTGTGT
ATAGTGTACGTAGGAACAACAGGTTGTTTCGCGGTAGATTGGTCTACATG
GTGGCTACCGACTAGTTGCCGGGGGGTTTTCGGCAGGGCGCCTCCTTCGC
GGGAAACCGATGGCCCTGCTGTTTATTGCCGCTGTCAACCGTTTGAAGGC
CGCTCTGGTGAATGGATATTCCAAGCTGTTTCGACCGTGGGCGTTTGCTG
CAGTGCTGTGGGGAAGACGCGCATCTACAGCAGTAATATGTTGCCTCTAA
TCCTATCATCGTCGTGATCGCTGCTGTCACTGGTCGGGTGTGCCTTGTGC
AGAGGCGCAACGGCGGCGGCCTTCGCGATGAACGAGGATTTCTCCCGGAC
TTTAGAGAACCAGATGGACGTCTTCAACTCGCCGGACGGTGACCAGGTTA
GTTGGAACATTAGCATCACTTTGGTGTCACTTAGGTAGGTATTATTGGCT
GGGAGTTTCTAGTACAAGATACGTTCGCGGCGGCGAGCTCCTGCAAGGCT
TGAGTGCTTGAGCAGCTTCGTCCGCATTGCTCTCTTTGTCCAGCGCGCGC
TAGCCGAGAAGTCACGCGAGCTAGTGCTGATACCGGTTCGGGCTCTTTAC
GCCTTAAAGCGCCCCAGCACGCCATGTAAACGACGTTGTTGTAAGGGGAA
CAAGTAGCTCTTGTACCACGTGTTGGTGTGAGACCGCGGCGGCAACCCGT
CCTCACCCGCGCACCTGTTCGTTCTACGCGCTGTTGGTTGTCTGCCGCTG
CTGCTGTTTGCCGCTCCCACGGTTTAGGTCTTGGCGACCCAGCAGAAGCT
GGACGAGGTAAAGGACGTGATGGTGGCGTCTGTGGAGCTGGTGTTGGAGA
GGGGGGAGAGGTTGGAGCTGCTCGTGGACAAGACGGACAACTTGCAGCAG
CAGGTGAGCTCACGGCACCAGAGCATCGTTCGGTAACGACGAAGATGACA
GCGCGAGGCATGCTTCTCGGTTCGCGTTCGTCGTGGGCGTAAGCGAGATG
TGTCACCATAACAGCAGTAGCGTGTTGTGTCGTTTGCGGTGTATTGTTTA
GTGTAGCCGACATGGTGTCCACCCTTTGCCTAGTGTGTGGTGGCTGTCTT
CGGTGATGAGCAACATCGCAGGGATGATTTCGTCGTTGTCGATTTTTGTG
TTGATGTGTCTATTTTAGGGCCGACGACTGTAGTTTGCGGCGGAAAAGTG
GAATTATGTCTTTCTCAGTGAACGCCAGCATACACACTTCTTCATCCGTC
AGAAATTGAGGGCTTCGAATGGCGGTACGATGGCCATTGGTTGCTGCTGC
CTCGCCCCCCTTCAGCATGTAGCCCTTCTCAATGTCGTTAAGGCGTTGAG
GAACGGACTCGGCGTGAGAAACGTTCTCGAACAGAAACGACGTGGTGTCG
TCATGCGCGTGCAGGAGCTTGGTGATGCCTGTTCGTCTGATGAGGTTTGA
TGTGTGTGTGTTTCTTTGATTGGTATCGACGGCGCTAACCGTCTGGTCAA
TGACAAGACGTCAATCTTACAAAGCGGGGTAGACAAAACGTGAACACGGT
TTCTAGTCGAAGGGTTACTGGGGGGGAAGGGGGGGGGGGCAGGAGCTGGA
CAACACTGTCCTAGAAGTACTTTTGAAGTAGCATTGCATCGAATATGTAT
GCGTTTTGAGTTAACACCGGTGCGCTAACCGGCCGAGCAACGAAAAGACG
CCAATCTTACAGGTGGATAAAAAAAGAAGCAAATACGCTTTCTGATCAAA
AGGGTGTGTGGCGTGGGTGTTGATTTTTAGCATCGACCGCGCTAACCGGC
TGACCAATGAAAATACGTGGGCGGGTAAAATCGAGGTCCCTGGAAGGGGA
CCAAGATTCCAAAAATGCGCAATGCGCTAAATGCTCTCCACATATTTTTT
CACAGCTCCATACATTACAGCTCAACACTGTGTGTGTGTTTTCGTGCCAT
GTAGTCTAGGCGCCAATCTACATCGTAGGGTACATGTTTTGATCCACCAG
GCGGAGTGACGCAGGAGGCAGGCCGAGCAGAAGTTTTCTCTCGTATATTT
CTACTTCTCCGATTTTGCTCTTGATCGTGAGTGTCGACTGGGTGATATCT
TTAGCCCCGTTGCCACTGCTCTCGCTTACGCTACCCGCCCGCCCACGCAG
TGTGAG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig13380:476..4481+

>mRNA_Ecto-sp13_S_contig13380.2702.1 ID=mRNA_Ecto-sp13_S_contig13380.2702.1|Name=mRNA_Ecto-sp13_S_contig13380.2702.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=405bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13380:476..4481+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGTCGTACGTCTACGACCAGTACGTCTTCCACTACCGAGTAGACGACGG
GCTAACTTTCCTGTGCATGGCGGACGAGGACAGCCGCCGGCGGATACCCT
TCGCCTTCCTGCAAGAAATCAAGAACCGGTTCCAGGCTACGTACGGGGAT
AGAGGCGCAACGGCGGCGGCCTTCGCGATGAACGAGGATTTCTCCCGGAC
TTTAGAGAACCAGATGGACGTCTTCAACTCGCCGGACGGTGACCAGGTCT
TGGCGACCCAGCAGAAGCTGGACGAGGTAAAGGACGTGATGGTGGCGTCT
GTGGAGCTGGTGTTGGAGAGGGGGGAGAGGTTGGAGCTGCTCGTGGACAA
GACGGACAACTTGCAGCAGCAGGTGAGCTCACGGCACCAGAGCATCGTTC
GGTAA
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