mRNA_Ecto-sp13_S_contig13299.2642.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig13299.2642.1
Unique NamemRNA_Ecto-sp13_S_contig13299.2642.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig13299.2642.1 vs. uniprot
Match: D7FYE9_ECTSI (Glycosyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYE9_ECTSI)

HSP 1 Score: 569 bits (1467), Expect = 1.580e-204
Identity = 286/304 (94.08%), Postives = 294/304 (96.71%), Query Frame = 1
Query:    4 QVAVCLRTKDFARFLPEWIAFHYALGVDEIMIYDDDSTDNTEEVLRPFVEAGIVRYIFEVIFDRVTQMKPLNHCLEQHLERRSRGDEDAATWVLFHDTDEYLYPSDTSLNIRDALEKHHRTCCALVSRVQYGSAGHDEMPRGLLLENFLMHSHPGPQFGNGLGKVMVNLDPSEPELGVVEPPLRSMHNAEGCDCAGAKTGGVSDLRINHYLGSIGDYMDRTTRYWEGKKKGEMAAAKTVLHRDVNDYRSDDIEHWACATREVLFRIMEGLDLEGGGERGXXXXXXXXXXXX--GGVKAVSKLEP 909
            +VA+CLRTKDFARFLPEWIAFHYALGVDEI IYDDDSTDNTEEVL PFVEAGIVRYIFEVIFDR+TQMKPLNHCLEQ LERRSRGDEDAATWVLFHDTDEYLYPSDTSLNIRDALEKHHRTCCALVSRVQYGSAGHDEMPRGLLLENFLMHSHPGPQFGNGL KVMVNLDPSEPE+GVVEPPLRSMHNAEGCDCAG+K GGVSDLRINHYLGSIGDYMDRTTRYWE KKKGEMAAAKTVL RD+N+YRSDDIEHWACATREVLFRI+EGLDLEGGGERG XXXXXXXXXXX  GGVKAVSKLEP
Sbjct:    2 KVAICLRTKDFARFLPEWIAFHYALGVDEIFIYDDDSTDNTEEVLWPFVEAGIVRYIFEVIFDRMTQMKPLNHCLEQQLERRSRGDEDAATWVLFHDTDEYLYPSDTSLNIRDALEKHHRTCCALVSRVQYGSAGHDEMPRGLLLENFLMHSHPGPQFGNGLAKVMVNLDPSEPEVGVVEPPLRSMHNAEGCDCAGSKFGGVSDLRINHYLGSIGDYMDRTTRYWEAKKKGEMAAAKTVLRRDINNYRSDDIEHWACATREVLFRIVEGLDLEGGGERGGXXXXXXXXXXXXEGGVKAVSKLEP 305          
BLAST of mRNA_Ecto-sp13_S_contig13299.2642.1 vs. uniprot
Match: A0A6H5KB75_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB75_9PHAE)

HSP 1 Score: 566 bits (1458), Expect = 6.290e-200
Identity = 274/302 (90.73%), Postives = 283/302 (93.71%), Query Frame = 1
Query:    4 QVAVCLRTKDFARFLPEWIAFHYALGVDEIMIYDDDSTDNTEEVLRPFVEAGIVRYIFEVIFDRVTQMKPLNHCLEQHLERRSRGDEDAATWVLFHDTDEYLYPSDTSLNIRDALEKHHRTCCALVSRVQYGSAGHDEMPRGLLLENFLMHSHPGPQFGNGLGKVMVNLDPSEPELGVVEPPLRSMHNAEGCDCAGAKTGGVSDLRINHYLGSIGDYMDRTTRYWEGKKKGEMAAAKTVLHRDVNDYRSDDIEHWACATREVLFRIMEGLDLEGGGERGXXXXXXXXXXXXGGVKAVSKLEP 909
            +VAVCLRTKDFARFLPEWIAFHYALGVDEIMIYDDDSTDNT+EVLRPFVEAGIVRYIFEVIFDR+TQMKPLNHCLEQHLERRSRGDEDAATWVLFHDTDEYLYPSDTSLNIRDALEKHHRTCCALVSRVQYGSAGHDEMPRGLLLENFLMHSHPG QFGNGL KVMVNLDPSEPELGVVEPPLRSMHNAEGCDCAG+K+ GVS+LRINHYLGSIGDYMDRT RYWE KK+GEMAAAKTVLHRD+NDYRSDDIEHWACATREVLFRI+EGLDLE GGERG            G VKAVSKLEP
Sbjct:  214 RVAVCLRTKDFARFLPEWIAFHYALGVDEIMIYDDDSTDNTKEVLRPFVEAGIVRYIFEVIFDRMTQMKPLNHCLEQHLERRSRGDEDAATWVLFHDTDEYLYPSDTSLNIRDALEKHHRTCCALVSRVQYGSAGHDEMPRGLLLENFLMHSHPGQQFGNGLPKVMVNLDPSEPELGVVEPPLRSMHNAEGCDCAGSKSSGVSNLRINHYLGSIGDYMDRTARYWEEKKQGEMAAAKTVLHRDINDYRSDDIEHWACATREVLFRIVEGLDLEKGGERGGEGEGGEQ----GEVKAVSKLEP 511          
BLAST of mRNA_Ecto-sp13_S_contig13299.2642.1 vs. uniprot
Match: D7FLX6_ECTSI (Glycosyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLX6_ECTSI)

HSP 1 Score: 327 bits (839), Expect = 5.380e-107
Identity = 155/276 (56.16%), Postives = 197/276 (71.38%), Query Frame = 1
Query:    1 QQVAVCLRTKDFARFLPEWIAFHYALGVDEIMIYDDDSTDNTEEVLRPFVEAGIVRYIFEVIFDRVTQMKPLNHCLEQHLERRSRGDEDAATWVLFHDTDEYLYPSDTSLNIRDALEKHHRTCCALVSRVQYGSAGHDEMPRGLLLENFLMHSHPGPQFGNGLGKVMVNLDPSEPELGVVEPPLRSMHNAEGCDCAGAKTGGVSDLRINHYLGSIGDYMDRTTRYWEGKKKGEMAAAKTVLHRDVNDYRSDDIEHWACATREVLFRIMEGLDLEGG 828
            ++VAVCLRTKD+ RFLPEW+AFHYA+GVDE+ IYDD+S D T EVL+PFV AGIVRYIF++I  R  QM+PLN CL  ++ R+    E+A +W+LFHD DEY+YP DTS+ + DAL KH  TCCALV R+QYGS GHDEMPRGL++++F+ H +      N   KV+VNL P+E +   V PPL+SMH AEGC C   K     ++ INHYLGS GDY++R  RYW     G+      +  RDVND  SD I HW+C+TREVL+R+  GLDL+ G
Sbjct:  174 KEVAVCLRTKDYGRFLPEWVAFHYAIGVDEVSIYDDNSVDQTSEVLKPFVSAGIVRYIFDMIPRRNAQMEPLNRCLRHYINRKKDDPENAPSWLLFHDNDEYVYPRDTSMTLFDALNKHESTCCALVRRIQYGSGGHDEMPRGLVMDSFMAHQNDSSHHANP--KVVVNLTPTESDP--VAPPLKSMHKAEGCACLDLK----QEVLINHYLGSRGDYLERVHRYWSTYMAGDNDPGHRLSQRDVNDRVSDTITHWSCSTREVLYRVDNGLDLQTG 441          
BLAST of mRNA_Ecto-sp13_S_contig13299.2642.1 vs. uniprot
Match: A0A6H5KFX9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KFX9_9PHAE)

HSP 1 Score: 311 bits (796), Expect = 5.860e-101
Identity = 154/272 (56.62%), Postives = 189/272 (69.49%), Query Frame = 1
Query:    4 QVAVCLRTKDFARFLPEWIAFHYALGVDEIMIYDDDSTDNTEEVLRPFVEAGIVRYIFEVIFDRVTQMKPLNHCLEQHLERRSRGDEDAATWVLFHDTDEYLYPSDTSLNIRDALEKHHRTCCALVSRVQYGSAGHDEMPRGLLLENFLMHSHPGPQFGNGLGKVMVNLDPSEPELGVVEPPLRSMHNAEGCDCAGAKTGGVSDLRINHYLGSIGDYMDRTTRYWEGKKKGEMAAAKTVLHRDVNDYRSDDIEHWACATREVLFRIMEGLDL 819
            +VA C+RTKDF RFLPEWIA+HYA+GVDE+ IYDDDS D+T E+L+PFV+AGIV YI E       QM PLN CLE+H+ RR  GD +A  W+LFHDTDEY+ P DTS+ I  AL+KH  TCC  V RV YG+ GHDEMP+GLLLE FL H+H      N L KV VNLD ++P LG     L+SMHN +GC C       V ++RINHYLGS GDY+ +T RYW+     +    K +L RD+N ++SD I  WACATREVL  ++EG DL
Sbjct:  137 KVAACVRTKDFGRFLPEWIAYHYAIGVDEMTIYDDDSNDDTVEILQPFVDAGIVTYILERTGHWENQMTPLNLCLEEHMVRRL-GDNEAPRWLLFHDTDEYVVPVDTSVTIAQALDKHSATCCVRVPRVTYGAGGHDEMPQGLLLEVFLQHAHLHDFKSNRLPKVAVNLDTTQPLLGQARSRLKSMHNGQGCQCDVIP---VDEIRINHYLGSRGDYLGKTKRYWQEVYSRDKVE-KWLLERDINSFKSDTITTWACATREVLSVVLEGSDL 403          
BLAST of mRNA_Ecto-sp13_S_contig13299.2642.1 vs. uniprot
Match: A0A6H5JE36_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JE36_9PHAE)

HSP 1 Score: 148 bits (374), Expect = 8.110e-38
Identity = 82/179 (45.81%), Postives = 107/179 (59.78%), Query Frame = 1
Query:    1 QQVAVCLRTKDFARFLPEWIAFHYALGVDEIMIYDDDSTDNTEE----VLRPFVEAGIVRYIFEVIFDR-------VTQMKPLNHCLEQHLERRSRGDEDAATWVLFHDTDEYLYPSDTS-LNIRDALEKHHRTCCALVSRVQYGSAGHDEMPRGLLLENFLMHSHPGPQFGNGLGKVM 501
            +QV  C RTKD  R+LPEW+A+H+A+GVDE+ I+DDDS D+T E    VL PFV AGIV++    I  R          M PL  C+E +      GD  A  WV+  DTDEYL+  +   + + +ALE    TCC  VS VQ+G++G  + PRGLLLENFL H+ P     NG  KV+
Sbjct:  249 EQVVSCTRTKDRGRYLPEWVAYHWAMGVDEMNIFDDDSVDDTREARIFVLEPFVRAGIVKFQRRHIDPRNATSTPPSAAMPPLTECVESYRGMHDWGDRLAPRWVVLLDTDEYLWAREAGKIGLPEALEARSTTCCLQVSTVQHGTSGFSKSPRGLLLENFLTHADPTSPELNGPPKVL 427          
BLAST of mRNA_Ecto-sp13_S_contig13299.2642.1 vs. uniprot
Match: A0A3N6P8V1_9CYAN (DUF563 domain-containing protein n=2 Tax=Okeania TaxID=1458928 RepID=A0A3N6P8V1_9CYAN)

HSP 1 Score: 105 bits (263), Expect = 1.150e-21
Identity = 76/258 (29.46%), Postives = 125/258 (48.45%), Query Frame = 1
Query:    4 QVAVCLRTKDFARFLPEWIAFHYALGVDEIMIYDDDSTDNTEEVLRPFVEAGIVRYIFEVIFDRVTQMKPLNHCLEQHLERRSRGDEDAATWVLFHDTDEYLYPSDTSLNIRDALEKHHRTCCALVSRVQYGSAGHDEMPRGLLLENFLMHSHPGPQFG-NGLGKVMVN----LDPSEPELGVVEPPLRSMHNAEGCDCAGAKTGGVSDLRINHYLGSIGDYMDRTTRYWEGKKKGEMAAAKTVLHRDV-NDYRSDDI 759
            ++++C   KD   +L EW+ FH  +GV+   +YD++STDNT+++L+ +++ G V Y +    D+  Q+   NHCL+ H     R D +   W+ F D DE+L+P+     I D +++        V+ + +G++GH++ P GL +ENF+  S     FG N   K +++    + P  P   V         N +      + T  +  LRINHY          TTR  E   K  M    T   R   +D+ S D+
Sbjct:  819 KLSICAIMKDEGPYLEEWLEFHKLVGVERFYLYDNNSTDNTQDILQLYIQKGEVIYYYWP--DKPGQISAYNHCLKNH-----RYDSE---WIAFIDLDEFLFPTAAE-KITDIIDEFSDVSALGVNWLNFGTSGHEKNPEGLQIENFIKRSK--SSFGPNKHIKCILHPEKTIRPLNPHQFVFSEGRAVTENKQPIKGPFSSTHSIKKLRINHY----------TTRSKEESMKKMMRGRATKNERRPWSDFESKDV 1053          
BLAST of mRNA_Ecto-sp13_S_contig13299.2642.1 vs. uniprot
Match: A0A846C760_9CYAN (Glycosyltransferase family 92 protein n=1 Tax=Okeania sp. SIO2F4 TaxID=2607790 RepID=A0A846C760_9CYAN)

HSP 1 Score: 104 bits (259), Expect = 3.070e-21
Identity = 78/279 (27.96%), Postives = 134/279 (48.03%), Query Frame = 1
Query:    4 QVAVCLRTKDFARFLPEWIAFHYALGVDEIMIYDDDSTDNTEEVLRPFVEAGIVRYIFEVIFDRVTQMKPLNHCLEQHLERRSRGDEDAATWVLFHDTDEYLYPSDTSLNIRDALEKHHRTCCALVSRVQYGSAGHDEMPRGLLLENFLMHSHPGPQFG-NGLGKVMVNLD----PSEPELGVVEPPLRSMHNAEGCDCAGAKTGGVSDLRINHYLGSIGDYMDRTTRYWEGKKKGEMAAAKTVLHRDVNDYRSDDIEHWA-CATREVLFRIMEGLDLE 822
            ++++C   KD   +L EW+ FH  +GV+   +YD++STDNT+E+L+ +++ G V Y +    ++  QM   +HCL  H     R D +   W+ F D DE+L+P+     I D +++ +      V+ + +G++GH++ P GL +ENF+  +     FG N   K ++  D    P  P   V         N +  +   + T  +  +RINHY          TTR  E   K  M    T      N+ R      W+   +++V+F  +E L ++
Sbjct:   34 RLSICAIMKDEGSYLEEWLEFHKLVGVERFYLYDNNSTDNTQEILQFYIQNGEVIYYYWP--EKPGQMSAYSHCLNNH-----RYDSE---WIAFIDLDEFLFPTIAE-KITDIIDEFYDVSALGVNWLNFGTSGHEKKPEGLQIENFIKRAK--TSFGPNKHIKCILRPDKTVRPLNPHQFVFSEGKVVTENKQAINKPFSSTHSIKKIRINHY----------TTRSKEESMKKMMRGRATK-----NEQRP-----WSHFESKDVIFNEVEDLTIQ 279          
BLAST of mRNA_Ecto-sp13_S_contig13299.2642.1 vs. uniprot
Match: A0A846EV06_9CYAN (Glycosyltransferase family 92 protein n=1 Tax=Okeania sp. SIO1H5 TaxID=2607777 RepID=A0A846EV06_9CYAN)

HSP 1 Score: 101 bits (252), Expect = 2.630e-20
Identity = 77/278 (27.70%), Postives = 132/278 (47.48%), Query Frame = 1
Query:    4 QVAVCLRTKDFARFLPEWIAFHYALGVDEIMIYDDDSTDNTEEVLRPFVEAGIVRYIFEVIFDRVTQMKPLNHCLEQHLERRSRGDEDAATWVLFHDTDEYLYPSDTSLNIRDALEKHHRTCCALVSRVQYGSAGHDEMPRGLLLENFLMHSHPGPQFG-NGLGKVMVN----LDPSEPELGVVEPPLRSMHNAEGCDCAGAKTGGVSDLRINHYLGSIGDYMDRTTRYWEGKKKGEMAAAKTVLHRDVNDYRSDDIEHWA-CATREVLFRIMEGLDL 819
            ++++C   KD   +L EW+ FH  +GV++  +YD++STDNT+ +L+ ++  G V Y +    D+  QM    HCL+ H     R D +   W+ F D DE+L+P+  +  I D +++        V+ + +G++GH++ P+GL +ENF+  S     FG N   K +++    + P  P   V         N +      + T  +  LRINHY          TTR  E   K  M    T           ++   W+   +++V+F  +E L +
Sbjct:   90 KLSICAIMKDEGPYLEEWLEFHKLVGVEKFYLYDNNSTDNTQNILQLYIHNGEVIYYYWP--DKPGQMSAYTHCLKNH-----RYDSE---WIAFIDLDEFLFPT-VAEKITDIIDEFSDVSALGVNWLNFGTSGHEKKPQGLQIENFIKRSK--SSFGPNKHIKCILHPEKTIRPLNPHQFVFSEGRVVTENKQPIKGPFSSTHSIKKLRINHY----------TTRSKEESMKKMMRGRAT----------KNEPRPWSHFESKDVIFNEVEDLTI 334          
BLAST of mRNA_Ecto-sp13_S_contig13299.2642.1 vs. uniprot
Match: UPI001408A856 (glycosyltransferase family 92 protein n=1 Tax=Perlabentimonas gracilis TaxID=2715279 RepID=UPI001408A856)

HSP 1 Score: 97.4 bits (241), Expect = 7.840e-20
Identity = 74/231 (32.03%), Postives = 114/231 (49.35%), Query Frame = 1
Query:    7 VAVCLRTKDFARFLPEWIAFHYALGVDEIMIYDDDSTDNTEEVLRPFVEAGIVRYIFEVIFDRVTQMKPLNHCLEQHLERRSRGDEDAATWVLFHDTDEYLYPSDTSLNIRDALEKHHRTCCALVSRVQYGSAGHDEMPRGLLLENFLMHSHPGPQFGNGLGKVMVNLDPSEPELGVVEPPLRSMHNAEGCDCAGAKTGGV--------SDLRINHY-LGSIGDYMDRTTR 672
            + VC   K+   +  EWI +H A GV++  IY+++STDNT EVL+P++++GIV Y F  I  +  Q    NHCL+Q+     R D   A W+ F D DE++ P  T  +I + L+         ++ + YGS G      G +++ F  HS+P  Q    + K +VN   +   L    P L S H A   D  G K              +RINHY + S  +++++  R
Sbjct:   55 LTVCAIAKNEGAYFKEWIEWHLAHGVEKFYIYNNESTDNTIEVLQPYIDSGIVEYHF--ITGKRKQTTAYNHCLKQY-----RYD---ARWIAFIDLDEFIVPIKTK-SIPEFLKPFEGFAAVEINWLCYGSGGAKTRMLGGVMDRFRTHSYPNSQLNRHI-KSIVNPRLALNFLSSHHPTLLSGHAA---DTNGHKVRKYFFQREPLHDKIRINHYAVKSFEEFLEKKAR 270          
BLAST of mRNA_Ecto-sp13_S_contig13299.2642.1 vs. uniprot
Match: R5PZS6_9PROT (Uncharacterized protein n=1 Tax=Acetobacter sp. CAG:977 TaxID=1262685 RepID=R5PZS6_9PROT)

HSP 1 Score: 96.3 bits (238), Expect = 1.620e-19
Identity = 65/229 (28.38%), Postives = 112/229 (48.91%), Query Frame = 1
Query:    1 QQVAVCLRTKDFARFLPEWIAFHYALGVDEIMIYDDDSTDNTEEVLRPFVEAGIVRYIFEVIFDRVTQMKPLNHCLEQHLERRSRGDEDAATWVLFHDTDEYLYPSDTSLNIRDALEKHHRTCCALVSRVQYGSAGHDEMPRGLLLENFLMHSHPGPQFG-NGLGKVMVN---LDPSEPELGVVEPPLRSMHNAEGCDCAGAKTGGVSDLRINHYLG-SIGDYMDRTTR 672
            Q +++C   K+ A +LPEWI F+  +GV++  IYD++S+DNT+EVL+P+++ G V Y ++    +  Q+   N  ++++        ++   W+ F D DE++ P  T   I + L+ +   C  ++  + YG  GH     GL+LE F  HS  G  FG N   K + N   +   +    V         N         +   +  +R+NHY G S  ++M +  R
Sbjct:   15 QYLSLCAIVKNEAPYLPEWIEFYKLVGVEKFYIYDNESSDNTKEVLKPYIDTGDVVYTYQP--GQAQQLVAYNDAVKKY--------KNETKWLGFFDLDEFVMPLSTK-TIPEFLKDYEEECGVVIYWLVYGDNGHKTKTDGLVLERFTAHSEEG--FGVNKYLKTIANPREIKRMDVHYAVYRGGFAKDENGSFRPGGMGEYPQIKKIRMNHYFGKSFEEFMQKRNR 230          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13299.2642.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FYE9_ECTSI1.580e-20494.08Glycosyltransferase n=1 Tax=Ectocarpus siliculosus... [more]
A0A6H5KB75_9PHAE6.290e-20090.73Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FLX6_ECTSI5.380e-10756.16Glycosyltransferase n=1 Tax=Ectocarpus siliculosus... [more]
A0A6H5KFX9_9PHAE5.860e-10156.62Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5JE36_9PHAE8.110e-3845.81Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A3N6P8V1_9CYAN1.150e-2129.46DUF563 domain-containing protein n=2 Tax=Okeania T... [more]
A0A846C760_9CYAN3.070e-2127.96Glycosyltransferase family 92 protein n=1 Tax=Okea... [more]
A0A846EV06_9CYAN2.630e-2027.70Glycosyltransferase family 92 protein n=1 Tax=Okea... [more]
UPI001408A8567.840e-2032.03glycosyltransferase family 92 protein n=1 Tax=Perl... [more]
R5PZS6_9PROT1.620e-1928.38Uncharacterized protein n=1 Tax=Acetobacter sp. CA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig13299contigEcto-sp13_S_contig13299:455..3899 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeBacteria
Stop1
Start0
Seed ortholog score96.7
Seed ortholog evalue2e-17
Seed eggNOG ortholog756067.MicvaDRAFT_2450
Model size912
KEGG rclassRC00003,RC01253,RC01662
KEGG koko:K00573,ko:K03183,ko:K07003
KEGG ReactionR04990,R04993,R06859,R08774,R09736
KEGG Pathwayko00130,ko01100,ko01110,map00130,map01100,map01110
KEGG ModuleM00116,M00117
Hectar predicted targeting categoryother localisation
Exons5
EggNOG free text desc.Glycosyl transferase family 11
EggNOG OGs1GR5V@1117,COG0438@1,COG0438@2,COG0457@1,COG0457@2,COG0463@1,COG0463@2,COG2518@1,COG2518@2
Ec32 ortholog descriptionNucleotide-diphospho-sugar transferases
Ec32 orthologEc-08_003790.1
EC2.1.1.163,2.1.1.201,2.1.1.77
Cds size912
COG Functional cat.H
Best tax levelCyanobacteria
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462710.6868153-CDS-Ecto-sp13_S_contig13299:454..6851681462710.6868153-CDS-Ecto-sp13_S_contig13299:454..685Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig13299 455..685 -
1681462710.7065217-CDS-Ecto-sp13_S_contig13299:1221..14071681462710.7065217-CDS-Ecto-sp13_S_contig13299:1221..1407Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig13299 1222..1407 -
1681462710.7173197-CDS-Ecto-sp13_S_contig13299:1847..19641681462710.7173197-CDS-Ecto-sp13_S_contig13299:1847..1964Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig13299 1848..1964 -
1681462710.7255569-CDS-Ecto-sp13_S_contig13299:2775..29621681462710.7255569-CDS-Ecto-sp13_S_contig13299:2775..2962Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig13299 2776..2962 -
1681462710.7336462-CDS-Ecto-sp13_S_contig13299:3708..38991681462710.7336462-CDS-Ecto-sp13_S_contig13299:3708..3899Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig13299 3709..3899 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig13299.2642.1prot_Ecto-sp13_S_contig13299.2642.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig13299 455..3899 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig13299.2642.1

>prot_Ecto-sp13_S_contig13299.2642.1 ID=prot_Ecto-sp13_S_contig13299.2642.1|Name=mRNA_Ecto-sp13_S_contig13299.2642.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=304bp
QQVAVCLRTKDFARFLPEWIAFHYALGVDEIMIYDDDSTDNTEEVLRPFV
EAGIVRYIFEVIFDRVTQMKPLNHCLEQHLERRSRGDEDAATWVLFHDTD
EYLYPSDTSLNIRDALEKHHRTCCALVSRVQYGSAGHDEMPRGLLLENFL
MHSHPGPQFGNGLGKVMVNLDPSEPELGVVEPPLRSMHNAEGCDCAGAKT
GGVSDLRINHYLGSIGDYMDRTTRYWEGKKKGEMAAAKTVLHRDVNDYRS
DDIEHWACATREVLFRIMEGLDLEGGGERGGGGEGGGEGEGEGGVKAVSK
LEP*
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mRNA from alignment at Ecto-sp13_S_contig13299:455..3899-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig13299.2642.1 ID=mRNA_Ecto-sp13_S_contig13299.2642.1|Name=mRNA_Ecto-sp13_S_contig13299.2642.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3445bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13299:455..3899- (Ectocarpus species13 EcNAP12_S_4_19m)
CAACAGGTGGCTGTCTGTCTCCGCACGAAGGACTTCGCCCGCTTCCTCCC GGAGTGGATCGCCTTCCACTACGCTCTAGGAGTGGACGAGATAATGATCT ACGATGATGACAGCACCGACAATACCGAGGAGGTGCTCCGGCCTTTCGTC GAAGCCGGAATCGTGCGGTACATCTTCGAAGTGATCTTCGAGTGAGTCAG TAAGTTAGTTGAAGCGAGAGAGAACAATGGATTTGTGGTGGCTAATTTAG TAGCGAGTAAGAATTACGTTTGCACATGCAATCAGAAGTGATCTTTGGGT AGGTTAGTGTAGCGAGTAAGAACAACAGACGGAAGTATAAATCATGCCTC GTCGCTCCCCCCCCCTCTCTCTCTTGTCCGTTGGGGTTGGATATTGGTTG CGTGCGCTGCAGGCATTTTTATTTTTTGTTTTGTTTTTCTGGGGGGGGAG GGGCGCTTCACATTTGGCACAAAAGAGTTATAAATCACCAACTATCGTTG CTCTCTTGAATTTTGTTGCTTCTCGGTATCGGTTGCGTGCTGCGCCTACC GGTGCTCTTTTCCGCCGCAAGTCTGCCGTACGAGAGAGGGACGACGGGGA AACCGCCGTGATGTGCTTTGCGGTTAGCGGTTGCGCTCGTAGGAGCAAAA ACGCCATGGAGACGAGTCCTTCTGGAAACTCACCGGCGGGGTCGTCCTTG CAGGCCTCGACTACTCTGTTCGTGTGTTGGTTTGTGGTTGGTTTTGCACG AGAACGAGGCATCGGGAAAGCGAAAATGGCTTCCGTTGCCGTCTTGTGCA CGTCTCGCTGGCAAAGATTATTTGCGGCTTGTTGGAGCATCATCAATCGG TGCGAATCCGGGATGACTTTAAATGTACAGCTGCTGAATTCCCCCGTCTG CTACTCTACCGATCGTTTTTTTTGTCTCTTGCCGCAGCCGCGTGACTCAG ATGAAGCCCCTCAACCACTGCCTAGAGCAACACCTTGAGCGTAGAAGCAG AGGTGACGAGGATGCGGCGACTTGGGTGCTGTTCCACGACACGGATGAGT ATCTCTACCCCTCGGACACAAGCCTCAACATCCGGGACGCCTTGGAAAAG CACCACAGGACCTGCTGCGCGCTGGTGCGAGAGGGAGATGTTGGTTAGGG AGGGCGGGGGGGGGTGGCGCACTCTTATTGTCTTGCGTGCCATAGCGGTT AAATAGACCATTAAACACGCATTCTGGAGAGGATGTAAGACTCTTCCCAC AGGACCGATCACCGATGATGGCCAATCGTTCCGTCCTACTTTGCCAAAGG CGGCTCGAAATGGTTTTCATTTTATCCTTCATATCTACTGTATGTATCAC GCATTCCCGCCCTAGTACACTTCCTATCCCCCAGGATGTATAGCTACCCA TCTCCTGGCTTTTCCATCAATCCCCTACCCTTCCCGTCATCGTTCGCAAG GATTGAGTGTCTGGAGACCCCTCTCCCCCCCCCCCGGCACCGACTTCCGG GCGAGAAAATGAAAGAAACGAAAACGCCCCACACCTCTAAATTCATCAAC CGATCGACTCTTATGGTACTTAGATTTTCTGGCTACTCCTCCTCGACTTG TGTCCGTCCAGTTGGTTCCGTTGCCGCCCGCCGAATGAGACGGGGTGGAC CGTTTCGTTCCCGCCGCGTTTTTTCTTCTGTCACCCATAGAATTAATTGG TCCGCGTCGTTTTTTTTTTTTTCACTATGATACAACGAATCCACTCTATA TCCATAGACATAAGATTTTGCTCAATTAGTAGCGTTGTTGTATGACGAAC ACAGCCTGTATTTCTTGTACGGTTCCCCGAGCAACATGTAAAATCAGTGA TTCTTTTTTTCTGTGCGTGTGTGATTCTCGTTTCTTCCTCTTCGTGGGAC CTACCAACGTTCCTACATGTGTTTGCGCTCCCCAGGTGTCTCGCGTCCAG TACGGCTCCGCGGGCCACGACGAGATGCCCAGAGGCCTCCTGCTGGAGAA CTTTCTCATGCACAGTCACCCCGGCCCACAGTTCGGCAACGGCCTCGGAA AGGTGATCGATTTGTTAGTTTGGTCGCAACCGTACAGCTAGGTTTTTGTG AGAGGATTGATTCTCTCTTGGCTGGTTTGCGTAGGGGGATTCGTCGCTTG GGTGCGAAGTTGAGTGACCAATAGACGGATGCTCTTGTCAGAGAGATCGT TTCTTTGCTTCTCTTTATCGTGAACTCTGGTTGTTCGTTGTGAAACGTAG GTTGGGTCAAAATCAACACATCTTCCCTTGTCGTGATGAGAGGTTGTACG TCGTTCGTTTCCGTCCCGATCCCAGCAGGCGAGATAAGTCTACGAAATAC TCATATCCGTGACAGCGGTGCCGCCACCAGCCAAACGCTGTTTTTGTGGG TACTAAATGGATAGACGCGGCACCCACTGCGTTTTTCATTTCCCCCCCCG GCCGGGATCTTGTTCTGATTTTTTTGTTTTTTTTGCGTGAAGGTGATGGT AAACTTGGACCCGTCCGAGCCGGAGTTAGGGGTAGTCGAGCCCCCGCTGC GGAGCATGCACAATGCCGAGGGCTGCGACTGCGCAGGTGCCAAGACCGGC GGCGTCTCCGACCTGCGCATCAACCACTACCTCGGGAGCATCGGGGACTA CATGGACAGGACCACGAGATACTGGGAGGTATGATGCGTTGCAGATGGTG ACCAGCGGCAGCACACACCCGATTGGTTTTGCGGTTCTCGCTCCCAACCT CTGCATGCACAGGAACATCGTTTTTTTTGGGGGGGCATGGTTATGGGAAG GGTGAGAATTGCTCCCGCGGCTGGGCTTTCGGGCGGGGAATCCAGGGTTT TCCCCGTACTGTAGCGGTTCGTGCGTGGCCGCCGGTACGCGCATGGGCCG GGATGTGATCCTCACATATGCCTGCTTCCCTTTTTCTGCATCTGCCAAAT GATACATGAGAGAAAATGAAAATGGGCAGAACTCTCACCACACAGCCAAC GACCTCGGCCTGCTGTCCGTCAAGGTGCTCTCCAACCTCCCCGTCGGTCC CCCTGCCCCCCCCCCCCCCCTTCCGTTGAACGACTGGCTATGTTGCTTCG TGTTTTCCTTTCAGGGCCTACCTTGCCTGCATTCAAGCCTGTCCGCCTGC ATGCCTCCCACCATTGAACCACCGGTTTTGTTTTGTTTTAATTTGTTTGT GATTTCGGTATCAGGGGAAGAAGAAGGGCGAGATGGCCGCGGCGAAGACG GTGCTGCACCGAGACGTTAACGACTACCGGTCGGACGACATCGAGCACTG GGCGTGCGCCACGAGAGAAGTCCTCTTCCGAATCATGGAGGGCCTCGATC TGGAAGGAGGCGGAGAAAGAGGAGGGGGAGGAGAAGGAGGAGGAGAAGGA GAAGGAGAAGGAGGGGTGAAAGCCGTCTCTAAACTCGAGCCCTGA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig13299:455..3899-

>mRNA_Ecto-sp13_S_contig13299.2642.1 ID=mRNA_Ecto-sp13_S_contig13299.2642.1|Name=mRNA_Ecto-sp13_S_contig13299.2642.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=912bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13299:455..3899- (Ectocarpus species13 EcNAP12_S_4_19m)
CAACAGGTGGCTGTCTGTCTCCGCACGAAGGACTTCGCCCGCTTCCTCCC
GGAGTGGATCGCCTTCCACTACGCTCTAGGAGTGGACGAGATAATGATCT
ACGATGATGACAGCACCGACAATACCGAGGAGGTGCTCCGGCCTTTCGTC
GAAGCCGGAATCGTGCGGTACATCTTCGAAGTGATCTTCGACCGCGTGAC
TCAGATGAAGCCCCTCAACCACTGCCTAGAGCAACACCTTGAGCGTAGAA
GCAGAGGTGACGAGGATGCGGCGACTTGGGTGCTGTTCCACGACACGGAT
GAGTATCTCTACCCCTCGGACACAAGCCTCAACATCCGGGACGCCTTGGA
AAAGCACCACAGGACCTGCTGCGCGCTGGTGTCTCGCGTCCAGTACGGCT
CCGCGGGCCACGACGAGATGCCCAGAGGCCTCCTGCTGGAGAACTTTCTC
ATGCACAGTCACCCCGGCCCACAGTTCGGCAACGGCCTCGGAAAGGTGAT
GGTAAACTTGGACCCGTCCGAGCCGGAGTTAGGGGTAGTCGAGCCCCCGC
TGCGGAGCATGCACAATGCCGAGGGCTGCGACTGCGCAGGTGCCAAGACC
GGCGGCGTCTCCGACCTGCGCATCAACCACTACCTCGGGAGCATCGGGGA
CTACATGGACAGGACCACGAGATACTGGGAGGGGAAGAAGAAGGGCGAGA
TGGCCGCGGCGAAGACGGTGCTGCACCGAGACGTTAACGACTACCGGTCG
GACGACATCGAGCACTGGGCGTGCGCCACGAGAGAAGTCCTCTTCCGAAT
CATGGAGGGCCTCGATCTGGAAGGAGGCGGAGAAAGAGGAGGGGGAGGAG
AAGGAGGAGGAGAAGGAGAAGGAGAAGGAGGGGTGAAAGCCGTCTCTAAA
CTCGAGCCCTGA
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