mRNA_Ecto-sp13_S_contig1329.2636.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig1329.2636.1
Unique NamemRNA_Ecto-sp13_S_contig1329.2636.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig1329.2636.1 vs. uniprot
Match: D7FJL1_ECTSI (RNA helicase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJL1_ECTSI)

HSP 1 Score: 542 bits (1396), Expect = 4.420e-189
Identity = 272/273 (99.63%), Postives = 273/273 (100.00%), Query Frame = 1 
Query:    1 QGYVVCPSDKRFLLLFTFLKKNRKKKIMVFFSSCNSVKFHSELLNYIDIPVMDIHGRQKQQKRTTSFFQFCKQDTGVLLCTDVAARGLDIPAVDWIIQFDPPDQTAEYIHRVGRTARGQSGKGRALLFLLPEEVGFLRYLRTAKAKLNEYEFPVKKVANVQSQLSRLIEKNYYLNKSAREAYRSYLLAYSSHSLKDIYDVHELDLQAVARAFGFTVPPRVDLKLSARGQKGRGGGKERDQGRRKMAVGGGGHSFSATNPYGQKAPGDRRQFTH 819
            QGYVVCPSDKRFLLLFTFLKKNRKKKIMVFFSSCNSVKFHSELLNYID+PVMDIHGRQKQQKRTTSFFQFCKQDTGVLLCTDVAARGLDIPAVDWIIQFDPPDQTAEYIHRVGRTARGQSGKGRALLFLLPEEVGFLRYLRTAKAKLNEYEFPVKKVANVQSQLSRLIEKNYYLNKSAREAYRSYLLAYSSHSLKDIYDVHELDLQAVARAFGFTVPPRVDLKLSARGQKGRGGGKERDQGRRKMAVGGGGHSFSATNPYGQKAPGDRRQFTH
Sbjct:  372 QGYVVCPSDKRFLLLFTFLKKNRKKKIMVFFSSCNSVKFHSELLNYIDMPVMDIHGRQKQQKRTTSFFQFCKQDTGVLLCTDVAARGLDIPAVDWIIQFDPPDQTAEYIHRVGRTARGQSGKGRALLFLLPEEVGFLRYLRTAKAKLNEYEFPVKKVANVQSQLSRLIEKNYYLNKSAREAYRSYLLAYSSHSLKDIYDVHELDLQAVARAFGFTVPPRVDLKLSARGQKGRGGGKERDQGRRKMAVGGGGHSFSATNPYGQKAPGDRRQFTH 644
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BLAST of mRNA_Ecto-sp13_S_contig1329.2636.1 vs. uniprot
Match: A0A835ZG10_9STRA (RNA helicase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZG10_9STRA)

HSP 1 Score: 443 bits (1139), Expect = 1.680e-149
Identity = 220/272 (80.88%), Postives = 247/272 (90.81%), Query Frame = 1 
Query:    1 QGYVVCPSDKRFLLLFTFLKKNRKKKIMVFFSSCNSVKFHSELLNYIDIPVMDIHGRQKQQKRTTSFFQFCKQDTGVLLCTDVAARGLDIPAVDWIIQFDPPDQTAEYIHRVGRTARGQSGKGRALLFLLPEEVGFLRYLRTAKAKLNEYEFPVKKVANVQSQLSRLIEKNYYLNKSAREAYRSYLLAYSSHSLKDIYDVHELDLQAVARAFGFTVPPRVDLKLSARGQKGRGGGKERDQGRRKMAVGGGGHSFSATNPYGQKAPGDRRQFT 816
            QGYVVCPS+KRFLLLFTFLKKNR KK+MVFFSSCNSV +H+ELLNYIDIPVM+IHGRQKQQKRTT+FFQFC+Q+TG+LLCTDVAARGLDIPAVDWIIQ+DPPDQTAEYIHRVGRTARG +G GRALLFLLP+EVGFLRYLR AK  LNEYEFP  KVANVQSQLSRL+EKNYYLNKSAR+AYRSYLLAY+SHSLK +Y+VHELDLQAVA+AFGFTVPPRVDL LSA+G KGR   K  ++G+R  +    GH+FSA+NPYG+K  GDRRQF+
Sbjct:  430 QGYVVCPSEKRFLLLFTFLKKNRNKKVMVFFSSCNSVNYHAELLNYIDIPVMNIHGRQKQQKRTTTFFQFCRQETGILLCTDVAARGLDIPAVDWIIQYDPPDQTAEYIHRVGRTARGSTGAGRALLFLLPQEVGFLRYLRAAKVTLNEYEFPAHKVANVQSQLSRLVEKNYYLNKSARDAYRSYLLAYASHSLKTLYNVHELDLQAVAKAFGFTVPPRVDLNLSAKGAKGR--VKTVNKGKRDSS----GHAFSASNPYGKKKDGDRRQFS 695
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BLAST of mRNA_Ecto-sp13_S_contig1329.2636.1 vs. uniprot
Match: A0A7S2RSI8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RSI8_9STRA)

HSP 1 Score: 416 bits (1068), Expect = 9.090e-145
Identity = 204/273 (74.73%), Postives = 233/273 (85.35%), Query Frame = 1 
Query:    1 QGYVVCPSDKRFLLLFTFLKKNRKKKIMVFFSSCNSVKFHSELLNYIDIPVMDIHGRQKQQKRTTSFFQFCKQDTGVLLCTDVAARGLDIPAVDWIIQFDPPDQTAEYIHRVGRTARGQSGKGRALLFLLPEEVGFLRYLRTAKAKLNEYEFPVKKVANVQSQLSRLIEKNYYLNKSAREAYRSYLLAYSSHSLKDIYDVHELDLQAVARAFGFTVPPRVDLKLSARGQKGRGGGKERDQGRRKMAVGGGGHSFSATNPYGQKAPGDRRQFTH 819
            QG+VVCPS +RFLLLFTFLK+NRKKKIMVFFSSCNSVKFHSELLNYIDIPVMDIHG+QKQQKRTT+FFQFC+Q  G+LLCTDVAARGLDIP+VDWIIQ+DPPD   EYIHRVGRTARG +G GRALLFLLPEEVGFL+YLR+AK  LNEYEF   K+ANVQSQL+RLIE NYYLNKS REA+RSYL++Y+SHSLKDI++VHELDL+ V  AFGF+VPPRVDL  S +G      G+++ Q R K   G  GH+FSA NPYG +A  D+RQF H
Sbjct:    7 QGFVVCPSQRRFLLLFTFLKRNRKKKIMVFFSSCNSVKFHSELLNYIDIPVMDIHGKQKQQKRTTTFFQFCRQKEGILLCTDVAARGLDIPSVDWIIQYDPPDDPREYIHRVGRTARGLTGAGRALLFLLPEEVGFLKYLRSAKVSLNEYEFQSNKIANVQSQLTRLIENNYYLNKSGREAFRSYLMSYASHSLKDIFNVHELDLEGVGVAFGFSVPPRVDLNFSPKG------GRKKQQDRGKKGRGASGHAFSADNPYGVRAASDKRQFMH 273
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BLAST of mRNA_Ecto-sp13_S_contig1329.2636.1 vs. uniprot
Match: B8BY61_THAPS (RNA helicase n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BY61_THAPS)

HSP 1 Score: 424 bits (1090), Expect = 1.770e-144
Identity = 212/273 (77.66%), Postives = 231/273 (84.62%), Query Frame = 1 
Query:    1 QGYVVCPSDKRFLLLFTFLKKNRKKKIMVFFSSCNSVKFHSELLNYIDIPVMDIHGRQKQQKRTTSFFQFCKQDTGVLLCTDVAARGLDIPAVDWIIQFDPPDQTAEYIHRVGRTARGQSGKGRALLFLLPEEVGFLRYLRTAKAKLNEYEFPVKKVANVQSQLSRLIEKNYYLNKSAREAYRSYLLAYSSHSLKDIYDVHELDLQAVARAFGFTVPPRVDLKLSARGQKGRGGGKERDQGRRKMAVGGGGHSFSATNPYGQKAPGDRRQFTH 819
            QGYV  PSD+RFLLLFTFLKKN+ KKIMVFFSSCNSVKFHSELLNYIDIPVMDIHGRQKQQKRTT+FFQFCKQ TG LLCTDVAARGLDIPAVDWIIQFDPPD   EYIHRVGRTARG+ GKGRALLFL PEE GFLRYL+ AK  LNEYEFP+ K+ANVQSQL RLIEKNYYLN +AR+AYRSYLLAY+SHSL+DI+DVH LDL AV RAFGFT PPRVDL  S +G K R    +   G+ K      GHSFSA+NPYG+K  GD+RQF+H
Sbjct:  246 QGYVTVPSDQRFLLLFTFLKKNKNKKIMVFFSSCNSVKFHSELLNYIDIPVMDIHGRQKQQKRTTTFFQFCKQTTGTLLCTDVAARGLDIPAVDWIIQFDPPDDPKEYIHRVGRTARGEKGKGRALLFLTPEETGFLRYLKAAKVTLNEYEFPMTKLANVQSQLQRLIEKNYYLNCAARDAYRSYLLAYTSHSLRDIFDVHSLDLAAVGRAFGFTAPPRVDLAFSVKGPKARRHNGQVMNGKGKNGKLANGHSFSASNPYGRKESGDKRQFSH 518
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BLAST of mRNA_Ecto-sp13_S_contig1329.2636.1 vs. uniprot
Match: A0A7S1XXW2_9STRA (RNA helicase n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XXW2_9STRA)

HSP 1 Score: 423 bits (1088), Expect = 1.020e-143
Identity = 210/272 (77.21%), Postives = 237/272 (87.13%), Query Frame = 1 
Query:    1 QGYVVCPSDKRFLLLFTFLKKNRKKKIMVFFSSCNSVKFHSELLNYIDIPVMDIHGRQKQQKRTTSFFQFCKQDTGVLLCTDVAARGLDIPAVDWIIQFDPPDQTAEYIHRVGRTARGQSGKGRALLFLLPEEVGFLRYLRTAKAKLNEYEFPVKKVANVQSQLSRLIEKNYYLNKSAREAYRSYLLAYSSHSLKDIYDVHELDLQAVARAFGFTVPPRVDLKLSARGQKGRG-GGKERDQGRRKMAVGGGGHSFSATNPYGQKAPGDRRQF 813
            QGYVVCPS  RFLLLFTFLKKNRK+K+MVFFSSCN+VK+H+ELLNYID+PVMDIHGRQKQQ+RT++FFQFCK DTG+LLCTDVAARGLDIPAVDWI+Q+DPPDQ AEYIHRVGRTARG SG GRALLFL PEEVGFLRYLR AK  LNEYEFP  KVANVQ+QL RL+E+NYYLNKSAREAYRSYLLAY+SH+ KDI++VH LDL A A++FGFTVPPRVDL  SARG + R    K  D+ +R+ A G   H+FSA NPYGQ+A GDRRQF
Sbjct:  281 QGYVVCPSANRFLLLFTFLKKNRKRKVMVFFSSCNAVKYHAELLNYIDVPVMDIHGRQKQQRRTSTFFQFCKADTGILLCTDVAARGLDIPAVDWIVQYDPPDQPAEYIHRVGRTARGPSGDGRALLFLAPEEVGFLRYLRKAKVALNEYEFPTSKVANVQNQLERLVERNYYLNKSAREAYRSYLLAYASHADKDIFNVHNLDLVATAKSFGFTVPPRVDLNFSARGDRKRARNAKGGDKKKRQKASG---HAFSADNPYGQRAKGDRRQF 549
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BLAST of mRNA_Ecto-sp13_S_contig1329.2636.1 vs. uniprot
Match: W7U0G2_9STRA (RNA helicase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U0G2_9STRA)

HSP 1 Score: 427 bits (1098), Expect = 8.240e-143
Identity = 210/272 (77.21%), Postives = 239/272 (87.87%), Query Frame = 1 
Query:    1 QGYVVCPSDKRFLLLFTFLKKNRKKKIMVFFSSCNSVKFHSELLNYIDIPVMDIHGRQKQQKRTTSFFQFCKQDTGVLLCTDVAARGLDIPAVDWIIQFDPPDQTAEYIHRVGRTARGQSGKGRALLFLLPEEVGFLRYLRTAKAKLNEYEFPVKKVANVQSQLSRLIEKNYYLNKSAREAYRSYLLAYSSHSLKDIYDVHELDLQAVARAFGFTVPPRVDLKLSARGQKGRGGGKERDQGRRKMAVGGGGHSFSATNPYGQKAPGDRRQFT 816
            QGYVVCPSDKRFLLLFTFLK+N+++KIMVFFSSCNSVKFH+ELLNYID+PVMDIHGRQKQQ+RTT+FFQFC+QD G+LLCTDVAARGLDIPAVDWIIQ+DPPD   EYIHRVGRTARG +GKGRALLFL  EEVGFL+YLR AK  LNEYEFP KKVANVQ+QL++L+EKNYYLNKSAR+AYRSYLLAY+SHS KDI++VHELDLQAVARAFGF+VPPRVD+ LS++G KGR     +D+       G  GH FSA NPYG++  GD RQFT
Sbjct:  470 QGYVVCPSDKRFLLLFTFLKRNKQRKIMVFFSSCNSVKFHAELLNYIDLPVMDIHGRQKQQRRTTTFFQFCRQDKGILLCTDVAARGLDIPAVDWIIQYDPPDDPREYIHRVGRTARGAAGKGRALLFLTAEEVGFLKYLRAAKVALNEYEFPEKKVANVQAQLTKLVEKNYYLNKSARDAYRSYLLAYASHSHKDIFNVHELDLQAVARAFGFSVPPRVDINLSSKGPKGRLKNTHKDK-----RFGSTGHKFSANNPYGRREAGDSRQFT 736
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BLAST of mRNA_Ecto-sp13_S_contig1329.2636.1 vs. uniprot
Match: A0A7S2PMU9_9STRA (RNA helicase n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PMU9_9STRA)

HSP 1 Score: 417 bits (1071), Expect = 1.790e-140
Identity = 210/274 (76.64%), Postives = 231/274 (84.31%), Query Frame = 1 
Query:    1 QGYVVCPSDKRFLLLFTFLKKNRKKKIMVFFSSCNSVKFHSELLNYIDIPVMDIHGRQKQQKRTTSFFQFCKQDTGVLLCTDVAARGLDIPAVDWIIQFDPPDQTAEYIHRVGRTARGQSGKGRALLFLLPEEVGFLRYLRTAKAKLNEYEFPVKKVANVQSQLSRLIEKNYYLNKSAREAYRSYLLAYSSHSLKDIYDVHELDLQAVARAFGFTVPPRVDLKLSARGQKGRG-GGKERDQGRRKMAVGGGGHSFSATNPYGQKAPGDRRQFTH 819
            QGYV  PSD+RFLLLFTFLKKN+ KKIMVFFSSCNSVKFHSELLNYIDIPVMDIHGRQKQQKRTT+FFQFCKQ TG LLCTDVAARGLDIPAVDWIIQFDPPD   EYIHRVGRTARG  G GRALLFL PEE GFLRYL+ AK  LNEYEFP+KK++NVQSQL RLIEKNYYLN +AR+AYRSYLLAY+SHSL+DI++VHELDL AV RAFGFT PPRVDL  S +G K R   G+    G+ K      GHSFS +NPYG++  GD+RQF+H
Sbjct:  328 QGYVTVPSDQRFLLLFTFLKKNKNKKIMVFFSSCNSVKFHSELLNYIDIPVMDIHGRQKQQKRTTTFFQFCKQTTGTLLCTDVAARGLDIPAVDWIIQFDPPDDPKEYIHRVGRTARGDKGTGRALLFLTPEETGFLRYLKVAKVTLNEYEFPMKKLSNVQSQLQRLIEKNYYLNCAARDAYRSYLLAYASHSLRDIFNVHELDLAAVGRAFGFTAPPRVDLAFSMKGGKDRRHNGQVAKGGKGKTGKLSNGHSFSGSNPYGKRDRGDKRQFSH 601
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BLAST of mRNA_Ecto-sp13_S_contig1329.2636.1 vs. uniprot
Match: K0T9N9_THAOC (RNA helicase n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0T9N9_THAOC)

HSP 1 Score: 416 bits (1070), Expect = 5.400e-140
Identity = 207/273 (75.82%), Postives = 230/273 (84.25%), Query Frame = 1 
Query:    1 QGYVVCPSDKRFLLLFTFLKKNRKKKIMVFFSSCNSVKFHSELLNYIDIPVMDIHGRQKQQKRTTSFFQFCKQDTGVLLCTDVAARGLDIPAVDWIIQFDPPDQTAEYIHRVGRTARGQSGKGRALLFLLPEEVGFLRYLRTAKAKLNEYEFPVKKVANVQSQLSRLIEKNYYLNKSAREAYRSYLLAYSSHSLKDIYDVHELDLQAVARAFGFTVPPRVDLKLSARGQKGRGGGKERDQGRRKMAVGGGGHSFSATNPYGQKAPGDRRQFTH 819
            QGYV  PSD+RFLLLFTFLKKN+ KKIMVFFSSCNSVKFH+ELLNYIDIP MDIHGRQKQQKRTT+FFQFCKQ  G LLCTDVAARGLDIPAVDWIIQFDPPD   EYIHRVGRTARG  G GRALLFL PEE GFLRYL+ AK  LNEYEFP+KK+ANVQSQL RLIEKNYYLN +AR+AYRSYLLAY+SHSL+DI++VHELDL AV RAFGFT PPRVDL  S +G K R    +  +G+ K      GH+FSA+NPYG+K+  D+RQF+H
Sbjct:  354 QGYVTVPSDQRFLLLFTFLKKNKNKKIMVFFSSCNSVKFHAELLNYIDIPCMDIHGRQKQQKRTTTFFQFCKQSKGTLLCTDVAARGLDIPAVDWIIQFDPPDDPKEYIHRVGRTARGDEGTGRALLFLTPEETGFLRYLKAAKVTLNEYEFPMKKLANVQSQLQRLIEKNYYLNCAARDAYRSYLLAYASHSLRDIFNVHELDLSAVGRAFGFTAPPRVDLAFSMKGPKARRHNGQVTKGKGKTGKLANGHAFSASNPYGKKSAKDKRQFSH 626
[Close]
BLAST of mRNA_Ecto-sp13_S_contig1329.2636.1 vs. uniprot
Match: A0A7S2KTK2_9STRA (RNA helicase n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KTK2_9STRA)

HSP 1 Score: 414 bits (1063), Expect = 1.430e-139
Identity = 205/274 (74.82%), Postives = 233/274 (85.04%), Query Frame = 1 
Query:    1 QGYVVCPSDKRFLLLFTFLKKNRKKKIMVFFSSCNSVKFHSELLNYIDIPVMDIHGRQKQQKRTTSFFQFCKQDTGVLLCTDVAARGLDIPAVDWIIQFDPPDQTAEYIHRVGRTARGQSGKGRALLFLLPEEVGFLRYLRTAKAKLNEYEFPVKKVANVQSQLSRLIEKNYYLNKSAREAYRSYLLAYSSHSLKDIYDVHELDLQAVARAFGFTVPPRVDLKLSARGQKGRG-GGKERDQGRRKMAVGGGGHSFSATNPYGQKAPGDRRQFTH 819
            QG+V CPSDKRFLLLFTFLKKNRKKKIMVFFSSCNSVKFHSELLNYIDIPVMDIHGRQKQQKRTT+FFQF K  TG LLCTDVAARGLDIP VDWIIQFDPPD   EYIHRVGRTARG +G GRALLFL PEE GFL+YL+ AK  LNEYEFPV KVANVQSQL  LIEKNYYLN+SAR+AYRSYLLAY+SHS KDI++VH++DLQ  A AFGFT PPRVD+  + +G++GR  G ++ D   + M+ G   H+FSA+NP+G++  GD+RQF+H
Sbjct:  308 QGFVTCPSDKRFLLLFTFLKKNRKKKIMVFFSSCNSVKFHSELLNYIDIPVMDIHGRQKQQKRTTTFFQFMKDKTGTLLCTDVAARGLDIPEVDWIIQFDPPDDPKEYIHRVGRTARGATGSGRALLFLTPEETGFLKYLQAAKVTLNEYEFPVSKVANVQSQLQNLIEKNYYLNRSARDAYRSYLLAYASHSHKDIFNVHQMDLQGAATAFGFTTPPRVDVAFNVKGERGRKQGNRKHDPKTQGMSNG---HAFSASNPFGERQKGDKRQFSH 578
[Close]
BLAST of mRNA_Ecto-sp13_S_contig1329.2636.1 vs. uniprot
Match: B7G0M0_PHATC (RNA helicase n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G0M0_PHATC)

HSP 1 Score: 404 bits (1037), Expect = 1.700e-135
Identity = 200/273 (73.26%), Postives = 223/273 (81.68%), Query Frame = 1 
Query:    1 QGYVVCPSDKRFLLLFTFLKKNRKKKIMVFFSSCNSVKFHSELLNYIDIPVMDIHGRQKQQKRTTSFFQFCKQDTGVLLCTDVAARGLDIPAVDWIIQFDPPDQTAEYIHRVGRTARGQSGKGRALLFLLPEEVGFLRYLRTAKAKLNEYEFPVKKVANVQSQLSRLIEKNYYLNKSAREAYRSYLLAYSSHSLKDIYDVHELDLQAVARAFGFTVPPRVDLKLSARGQKGRGGGKERDQGRRKMAVGGGGHSFSATNPYGQKAPGDRRQFTH 819
            QGYV CPSDKRFLLLFTFLKKN+KKKIMVFFSSCNSVK+H+ELLNYID+PVMDIHGRQKQ KRTT+FFQFCK D G +LCTDVAARGLDIP VDWIIQFDPPD   EYIHRVGRTARG  G GRALLFL PEE GFLRYL+ AK  LNEY+FP  KVANVQSQL RLIE NYYLN+++R+AYRSYLLAY+SHS +DI++VHELDLQAV  AFGFT PPRVDL      +K +  GK          + G GH+FSA NPYG++   DRRQF+H
Sbjct:  324 QGYVTCPSDKRFLLLFTFLKKNKKKKIMVFFSSCNSVKYHAELLNYIDVPVMDIHGRQKQVKRTTTFFQFCKSDIGTMLCTDVAARGLDIPRVDWIIQFDPPDDPKEYIHRVGRTARGAKGSGRALLFLTPEETGFLRYLKAAKVTLNEYDFPTTKVANVQSQLYRLIESNYYLNRASRDAYRSYLLAYASHSHRDIFNVHELDLQAVGVAFGFTTPPRVDLAFGKEKRKKKVDGKT-------ARLAGSGHAFSADNPYGKRDASDRRQFSH 589
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1329.2636.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FJL1_ECTSI4.420e-18999.63RNA helicase n=2 Tax=Ectocarpus TaxID=2879 RepID=D... [more]
A0A835ZG10_9STRA1.680e-14980.88RNA helicase n=1 Tax=Tribonema minus TaxID=303371 ... [more]
A0A7S2RSI8_9STRA9.090e-14574.73Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
B8BY61_THAPS1.770e-14477.66RNA helicase n=1 Tax=Thalassiosira pseudonana TaxI... [more]
A0A7S1XXW2_9STRA1.020e-14377.21RNA helicase n=1 Tax=Phaeomonas parva TaxID=124430... [more]
W7U0G2_9STRA8.240e-14377.21RNA helicase n=2 Tax=Monodopsidaceae TaxID=425072 ... [more]
A0A7S2PMU9_9STRA1.790e-14076.64RNA helicase n=1 Tax=Skeletonema marinoi TaxID=267... [more]
K0T9N9_THAOC5.400e-14075.82RNA helicase n=1 Tax=Thalassiosira oceanica TaxID=... [more]
A0A7S2KTK2_9STRA1.430e-13974.82RNA helicase n=1 Tax=Leptocylindrus danicus TaxID=... [more]
B7G0M0_PHATC1.700e-13573.26RNA helicase n=2 Tax=Phaeodactylum tricornutum Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1329contigEcto-sp13_S_contig1329:14627..17529 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start0
Seed ortholog score547.0
Seed ortholog evalue5.1e-153
Seed eggNOG ortholog2880.D7FJL1
Preferred nameDDX18
Model size822
KEGG koko:K03254,ko:K13179
KEGG Pathwayko03013,map03013
Hectar predicted targeting categoryother localisation
GOsGO:0000288,GO:0000291,GO:0000462,GO:0000463,GO:0000470,GO:0000932,GO:0000956,GO:0003674,GO:0003676,GO:0003723,GO:0003724,GO:0003824,GO:0004004,GO:0004386,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005694,GO:0005730,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006401,GO:0006402,GO:0006417,GO:0006725,GO:0006807,GO:0006996,GO:0008026,GO:0008150,GO:0008152,GO:0008186,GO:0008283,GO:0009056,GO:0009057,GO:0009889,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010494,GO:0010501,GO:0010556,GO:0010605,GO:0010608,GO:0010629,GO:0012505,GO:0016032,GO:0016043,GO:0016070,GO:0016071,GO:0016072,GO:0016074,GO:0016442,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019058,GO:0019068,GO:0019072,GO:0019074,GO:0019222,GO:0019439,GO:0019904,GO:0022607,GO:0022613,GO:0022618,GO:0030490,GO:0030684,GO:0030686,GO:0030687,GO:0031323,GO:0031326,GO:0031332,GO:0031967,GO:0031974,GO:0031975,GO:0031981,GO:0032268,GO:0032991,GO:0033962,GO:0034248,GO:0034470,GO:0034622,GO:0034641,GO:0034655,GO:0034660,GO:0035770,GO:0036464,GO:0042254,GO:0042273,GO:0042274,GO:0042623,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043928,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044403,GO:0044419,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0046483,GO:0046700,GO:0048519,GO:0050789,GO:0050794,GO:0051171,GO:0051246,GO:0051704,GO:0060255,GO:0065003,GO:0065007,GO:0070013,GO:0070035,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0080090,GO:0090304,GO:0097159,GO:0140098,GO:1901360,GO:1901361,GO:1901363,GO:1901575,GO:1990417,GO:1990904,GO:2000112
Exons7
EggNOG free text desc.helicase activity
EggNOG OGsCOG0513@1,KOG0342@2759
Ec32 ortholog descriptionDEAD box helicase
Ec32 orthologEc-04_006510.1
EC3.6.4.13
Cds size822
COG Functional cat.JKL
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03009,ko03012,ko03041
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1329.2636.1prot_Ecto-sp13_S_contig1329.2636.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig1329 14627..17529 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462710.1789415-CDS-Ecto-sp13_S_contig1329:14626..147911681462710.1789415-CDS-Ecto-sp13_S_contig1329:14626..14791Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1329 14627..14791 -
1681462710.189294-CDS-Ecto-sp13_S_contig1329:15193..153101681462710.189294-CDS-Ecto-sp13_S_contig1329:15193..15310Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1329 15194..15310 -
1681462710.197171-CDS-Ecto-sp13_S_contig1329:15645..157531681462710.197171-CDS-Ecto-sp13_S_contig1329:15645..15753Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1329 15646..15753 -
1681462710.2049952-CDS-Ecto-sp13_S_contig1329:16011..160721681462710.2049952-CDS-Ecto-sp13_S_contig1329:16011..16072Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1329 16012..16072 -
1681462710.213133-CDS-Ecto-sp13_S_contig1329:16361..165131681462710.213133-CDS-Ecto-sp13_S_contig1329:16361..16513Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1329 16362..16513 -
1681462710.221276-CDS-Ecto-sp13_S_contig1329:16883..170181681462710.221276-CDS-Ecto-sp13_S_contig1329:16883..17018Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1329 16884..17018 -
1681462710.2294827-CDS-Ecto-sp13_S_contig1329:17445..175291681462710.2294827-CDS-Ecto-sp13_S_contig1329:17445..17529Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1329 17446..17529 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig1329.2636.1

>prot_Ecto-sp13_S_contig1329.2636.1 ID=prot_Ecto-sp13_S_contig1329.2636.1|Name=mRNA_Ecto-sp13_S_contig1329.2636.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=274bp
QGYVVCPSDKRFLLLFTFLKKNRKKKIMVFFSSCNSVKFHSELLNYIDIP
VMDIHGRQKQQKRTTSFFQFCKQDTGVLLCTDVAARGLDIPAVDWIIQFD
PPDQTAEYIHRVGRTARGQSGKGRALLFLLPEEVGFLRYLRTAKAKLNEY
EFPVKKVANVQSQLSRLIEKNYYLNKSAREAYRSYLLAYSSHSLKDIYDV
HELDLQAVARAFGFTVPPRVDLKLSARGQKGRGGGKERDQGRRKMAVGGG
GHSFSATNPYGQKAPGDRRQFTH*
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mRNA from alignment at Ecto-sp13_S_contig1329:14627..17529-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig1329.2636.1 ID=mRNA_Ecto-sp13_S_contig1329.2636.1|Name=mRNA_Ecto-sp13_S_contig1329.2636.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2903bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1329:14627..17529- (Ectocarpus species13 EcNAP12_S_4_19m)
CAGGGCTACGTCGTGTGCCCGAGCGATAAGCGCTTCCTCCTCCTCTTCAC
CTTCCTCAAGAAGAACCGCAAAAAGAAGATCATGGTGAGTACAGGCGACG
CGATAAATGTGTTGGTACTCAGTCTACCACGCGAGATTGCAAACTATCAT
CGTGCGTGCTTTCGAGGAATGAACCCCTGAAGCAGTCGCTGCGCGGGCGT
TTCGCCCTGAATTTTGCGCTAGACGGGGACTTTGTGCGGTTGAGTTGCTG
TTGCATGCTGTCATTCCGTCATAGAGCTTCTCCTATATCGCGGTCTCGCA
ACAGTGTTTTTCTCTTTGGGAAAGGGATAGGCACAGGGCGCGGTCTCTAT
TTCATGTCAAGCTGGATGTAGTCCTCCGATGCGTTTCTCGTGACCAGAAG
CGGCCGTGACCTTGTATACCAGCGCACTCTGATTCTCGTGTATGTTCCTC
CGTCGTGTGTACTACTCTGCTTTATCTCTCGCTTTTCCCCGTCGTTGGAT
GGGGTGTGCAGGTCTTCTTTTCGTCGTGCAACTCCGTCAAGTTCCACTCG
GAGCTGCTCAACTACATCGACATCCCCGTGATGGATATCCACGGTCGGCA
AAAGCAGCAGAAACGAACGACCTCTTTCTTTCAGTTCTGCAAGCAGGTGA
GCCCGCCGGAGGGCCACCGCTCGTCACTTCAATTGTGGCATGTACATCTG
TTGCAGACTACAAAATAATGTTTTGCACGGGACGCGCAAACGAGGGCTTG
CCTTGAAGCCTACAGGATGTGTGGTGCTGCTTTTGTGTTGACAATCATAC
TCACCGTCACTCCGCAATCTGGAGCGTTACCAGGCGCAATGTCTCTTACA
CATGCTTGATATAACCCATCCAACGGTTGTTGTACGGTCCACCTTCGCGT
TGACTACAAGGTCAAAGGCAAGCACCAAGGCAGCGAGCGCATGCGTATTA
CTGAACTAACGTCGCGCGGGACGGCGAGCAAAATTTTGACAGTCTTCTTC
GCACTCATTTTTCCAGGACACGGGGGTGCTGCTCTGCACAGACGTGGCCG
CCCGTGGGCTGGACATTCCGGCCGTGGACTGGATCATCCAGTTTGACCCT
CCTGACCAGACCGCCGAGTACATCCACAGGGTGGGACGAACCGCAAGAGG
ACAAAGCGGAAAGGGCAGGTGAAGCACACGCCCCTTTACAAAAGCTCCAG
GGAGAGAGGCAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGCCTTGTGCCT
TGTGCCTTGCCGTGATGATACCAGGTGGAGAAAGGGAGCCGAGTGTGCTT
TAGAGGTTTGGGTTGGTTCTCCGTGGGAGAGGATGACCCAATCGAGAGTG
GGGGATGTTACTCTTGGTCCTGGATTCAACCCGATTTCCCTCCCTAACGC
CATCCCGCAATTAGTCGACGTTGTGCTTTGTCTTGCCCTTGTTGACGGTT
CGTGCAGAGCTCTGCTGTTTTTGCTGCCTGAAGAGGTGGGGTTCCTGCGA
TATCTCCGGACGGCCAAGGTGACTGATTCGCTCCCATCTCCTTTTCTTTT
TTCCCTTTTGCACGAGAATATGTAGCCTTCTTTTGCTGTACGCACCTCGA
GTACCTCGTGCTTCCATTGGGCACCTCGACGTGCGTCATATGGCAATACG
TGAAGTATGTTGGTGTCGAACGGCGAAAGGGCAAGCGTTTAACCTGTCCG
ACTCAGGTGACCTTTCTTTGATCGCCCGTCAACAACCCTTGGATCTTGGT
TGATCGTTTCGTTCTTTTTTTGCTAGGCCAAGCTGAACGAGTATGAGTTC
CCGGTGAAGAAGGTGGCGAACGTTCAGTCGCAGCTCTCCCGTCTGATCGA
GAAGAACTACTACCTCAACAAGTCCGCCAGGGAGGTGAGAGAGAGAGAGA
GAGTAACGCGTCGTCAAGTACGTCCGACGACAGTCTTGCGCTTTTGGGAG
CCATTTGTGCGTGCGGCGCGGCATAAAAGGATGCTGTTTCGGGAGTCTTG
CGTTTTGAATGCGCGACTGTGTTGAGACTGTTGGTGATGATTACAGTGGG
CCACCATCGGCACGAAAGCGGGCGTCATGTCACCAACGCTTTTGGGCAAT
TGCTCCGAAAGGGTTCTTCCATTTGTTCGGGTAACACTACGAGCTTCCCA
TGACTCATTCAATTTTCACCATGCTCCGTTTGCCCCCTCGTGTTTTTTGC
TGCTACTGCCTTGTTTCAGGCGTACCGGTCCTACCTCCTGGCGTACTCGT
CGCACTCTCTCAAAGACATCTACGATGTCCACGAGCTAGACTTGCAAGCC
GTGGCGAGGGCATTCGGCTTCACCGTACCCCCGAGGGTAAGCATAGCATT
TGGGGCCGCATGCTGAATTCTGCCCTTTCTATCTTTCATGGCGGTCAAAG
ATCGCCTCATTCGCACCTCACCACACGCGTATCAAAGAACTAGCGGTAGC
GGTTGGCGTCGCCGTAGCAGTTCTTCCAAGATGTACTGTATGTGCGGCAC
GACCTGATCCTCGCGTTTCACCGGTACCACGATACGCGCCGCGAATACAC
GTAGGTACCTTGGTGTAGTTCCTTGAGGCGCACCACGTGGTGTTTTTTCT
GCATTGTGCGTGGATGGCATCTTTCTTCTTTGCAATGGTTCTTGCTTGCA
ACAGCTTGTGCCCTGTCTTGCAAAGGTCTCTCCAAACTTTGCGACGATGA
CACTGTGTTTTTTGTCACCACCAACGTCATTACGACAGGTGGACCTGAAG
CTGAGCGCAAGGGGGCAGAAGGGTCGAGGAGGAGGCAAGGAGCGCGACCA
AGGCCGAAGAAAAATGGCTGTCGGGGGCGGCGGGCACTCTTTCAGTGCCA
CGAACCCTTACGGTCAGAAGGCACCAGGAGATAGGCGCCAGTTCACCCAC
TAG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1329:14627..17529-

>mRNA_Ecto-sp13_S_contig1329.2636.1 ID=mRNA_Ecto-sp13_S_contig1329.2636.1|Name=mRNA_Ecto-sp13_S_contig1329.2636.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=822bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1329:14627..17529- (Ectocarpus species13 EcNAP12_S_4_19m)
CAGGGCTACGTCGTGTGCCCGAGCGATAAGCGCTTCCTCCTCCTCTTCAC
CTTCCTCAAGAAGAACCGCAAAAAGAAGATCATGGTCTTCTTTTCGTCGT
GCAACTCCGTCAAGTTCCACTCGGAGCTGCTCAACTACATCGACATCCCC
GTGATGGATATCCACGGTCGGCAAAAGCAGCAGAAACGAACGACCTCTTT
CTTTCAGTTCTGCAAGCAGGACACGGGGGTGCTGCTCTGCACAGACGTGG
CCGCCCGTGGGCTGGACATTCCGGCCGTGGACTGGATCATCCAGTTTGAC
CCTCCTGACCAGACCGCCGAGTACATCCACAGGGTGGGACGAACCGCAAG
AGGACAAAGCGGAAAGGGCAGAGCTCTGCTGTTTTTGCTGCCTGAAGAGG
TGGGGTTCCTGCGATATCTCCGGACGGCCAAGGCCAAGCTGAACGAGTAT
GAGTTCCCGGTGAAGAAGGTGGCGAACGTTCAGTCGCAGCTCTCCCGTCT
GATCGAGAAGAACTACTACCTCAACAAGTCCGCCAGGGAGGCGTACCGGT
CCTACCTCCTGGCGTACTCGTCGCACTCTCTCAAAGACATCTACGATGTC
CACGAGCTAGACTTGCAAGCCGTGGCGAGGGCATTCGGCTTCACCGTACC
CCCGAGGGTGGACCTGAAGCTGAGCGCAAGGGGGCAGAAGGGTCGAGGAG
GAGGCAAGGAGCGCGACCAAGGCCGAAGAAAAATGGCTGTCGGGGGCGGC
GGGCACTCTTTCAGTGCCACGAACCCTTACGGTCAGAAGGCACCAGGAGA
TAGGCGCCAGTTCACCCACTAG
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