mRNA_Ecto-sp13_S_contig1329.2635.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1329.2635.1 vs. uniprot
Match: D7FJL2_ECTSI (DEAD box helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJL2_ECTSI) HSP 1 Score: 1160 bits (3002), Expect = 0.000e+0 Identity = 616/641 (96.10%), Postives = 620/641 (96.72%), Query Frame = 2
Query: 2 LSSVTLTTAKEKSEIHLFCATAVKRLQDQDAQLPQVLNLKEMLSRGVGVHHGGLLPILKASSEIVEICFSRGLVKVLFATETFAMGVNMPARTVVFNGTRKHDGKDFRDLLPGEYTQMAGRAGRRGLDKVGTVIITCWSEPPPLVNLKMMLTGAATKLESQFRLKWNMILNLLRVEDMSVEDMMKRSFSEFRTQRELGAKDLPKVMKKCTDALNNLKATAEPCIRSEQSTIEEYQLLSAMASERSSDLLDYAMRSSKNARSVLGSKRGLIITHKKLVNAPAVVLRGHDEPGGRGSTAAAQSAGGAQDFLRAARAHAQGSLPGAVPTGEAEMKMLVLVLCHEGFVKPAGATSADKVAPESEPIDSFARPSGNVVMKRKDXXXXXWGGRTGGGXXWGGKAGKAVSGRGSAKGKVLKAGTYGEAAGRTFAVLEVGLGDIVSLAKAVKKLNAEDVLGGDSTALASAVKTLVEMESTLPSERDPKGTFTPLNLANELKVQEIGFRESSAELLNVLESRAASQCHTCPKLSEQYHLQQKRDKLERRIELLGHALSSEALSLFPDFQQRLGVLRSLGYVEGNTVQLKGRVACEINTCDELIATEMVFENVLESLDPPEIAGILSALIFQEKTQNEPPLTDRLQTAVAQ 1924
LSSVTLTTAKEKSEIHLFCATAVKRLQDQDAQLPQVLNLKEMLSRG+GVHHGGLLPILK EIVEICFSRGLVKVLFATETFAMGVNMPARTVVFNGTRKHDGKDFRDLLPGEYTQMAGRAGRRGLDKVGTVIITCWSEPPPLVNLKMMLTGAATKLESQFRLKWNMILNLLRVEDMSVEDMMKRSFSEFRTQRELGAKDLPKVMKKCTDALNNLKATAEPCIRSEQSTIEEYQLLSAMASERSSDLLDYAMRSSKNARSVLGSKRGL+ITHKKLVNAPAVVLRGHD+PGGRGSTAA QSAGGAQDFLRAARA AQGSLPGAVP GE EMKMLVLVLCHEGFV PA ATSADKVA ESEPIDSFARPSGNVVMKRK WGGR GGGXX KAGKA SGRGSAKGKVLKAGTYGEAAGRTFAVLEVGLGDIVSLAKAVKKLNAEDVLGGDSTALASAVKTLVEMESTLPSERDPKGTFTP+NLANELKVQEIGFRESSAELLNVLESRAASQCHTCPKLSEQYHLQQKRDKLERRIELLGHALSSEALSLFPDFQQRLGVLRSLGYVEGNTVQLKGRVACEINTCDELIATEMVFENVLESLDPPEIAGILSALIFQEKTQNEPPLTDRLQTAVAQ
Sbjct: 883 LSSVTLTTAKEKSEIHLFCATAVKRLQDQDAQLPQVLNLKEMLSRGIGVHHGGLLPILK---EIVEICFSRGLVKVLFATETFAMGVNMPARTVVFNGTRKHDGKDFRDLLPGEYTQMAGRAGRRGLDKVGTVIITCWSEPPPLVNLKMMLTGAATKLESQFRLKWNMILNLLRVEDMSVEDMMKRSFSEFRTQRELGAKDLPKVMKKCTDALNNLKATAEPCIRSEQSTIEEYQLLSAMASERSSDLLDYAMRSSKNARSVLGSKRGLVITHKKLVNAPAVVLRGHDDPGGRGSTAATQSAGGAQDFLRAARAQAQGSLPGAVPAGEVEMKMLVLVLCHEGFVTPAEATSADKVAAESEPIDSFARPSGNVVMKRKGDDDGGWGGRAGGGXXXXXKAGKASSGRGSAKGKVLKAGTYGEAAGRTFAVLEVGLGDIVSLAKAVKKLNAEDVLGGDSTALASAVKTLVEMESTLPSERDPKGTFTPVNLANELKVQEIGFRESSAELLNVLESRAASQCHTCPKLSEQYHLQQKRDKLERRIELLGHALSSEALSLFPDFQQRLGVLRSLGYVEGNTVQLKGRVACEINTCDELIATEMVFENVLESLDPPEIAGILSALIFQEKTQNEPPLTDRLQTAVAQ 1520
BLAST of mRNA_Ecto-sp13_S_contig1329.2635.1 vs. uniprot
Match: A0A6H5KP96_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP96_9PHAE) HSP 1 Score: 857 bits (2213), Expect = 7.000e-297 Identity = 458/495 (92.53%), Postives = 466/495 (94.14%), Query Frame = 2
Query: 2 LSSVTLTTAKEKSEIHLFCATAVKRLQDQDAQLPQVLNLKEMLSRGVGVHHGGLLPILKASSEIVEICFSRGLVKVLFATETFAMGVNMPARTVVFNGTRKHDGKDFRDLLPGEYTQMAGRAGRRGLDKVGTVIITCWSEPPPLVNLKMMLTGAATKLESQFRLKWNMILNLLRVEDMSVEDMMKRSFSEFRTQRELGAKDLPKVMKKCTDALNNLKATAEPCIRSEQSTIEEYQLLSAMASERSSDLLDYAMRSSKNARSVLGSKRGLIITHKKLVNAPAVVLRGHDEPGGRGSTAAAQSAGGAQDFLRAARAHAQGSLPGAVPTGEAEMKMLVLVLCHEGFVKPAGATSADKVAPESEPIDSFARPSGNVVMKRKDXXXXXWGGRTGGGXXWGGKAGKAVSGRGSAKGKVLKAGTYGEAAGRTFAVLEVGLGDIVSLAKAVKKLNAEDVLGGDSTALASAVKTLVEMESTLPSERDPKGTFTPLNLANELKVQ 1486
LSSVTLTTAKEKSEIHLFCATAVKRLQDQDAQLPQVL LKEMLSRGVGVHHGGLLPILKASSEIVEICFSRGLVKVLFATETFAMGVNMPARTVVFNGTRKHDGKDFRDLLPGEYTQMAGRAGRRGLDKVGTVIITCWSEPPPL MMLTGAATKLESQFRLKWNMILNLLRVEDMSVEDMMKRSFSEFRTQRELGAKDLPKVMKKCTDALNNLKAT EPCIRSEQSTIEEYQLLSAMASERSSDLLDYAMRSSKNARSVL SKRGL+ITHKKLVNAPAVVLRGHD+PGGRG+TAAAQSAGGAQDFLRAARA AQGSLPGA+PTGEAEMK LVL LCHEGFVKPA ATSA+K+A ESEPIDSFARPSGNVVMKRK WGGR GGGXX A SGRGSAKGKVLKAGTYGEAAGRTFAVLEVGLGDIVSLAKAVKK NAEDVLGGDSTALASAVK+LVEMEST PSERDPKGTFTP+NLANELKVQ
Sbjct: 747 LSSVTLTTAKEKSEIHLFCATAVKRLQDQDAQLPQVLKLKEMLSRGVGVHHGGLLPILKASSEIVEICFSRGLVKVLFATETFAMGVNMPARTVVFNGTRKHDGKDFRDLLPGEYTQMAGRAGRRGLDKVGTVIITCWSEPPPL----MMLTGAATKLESQFRLKWNMILNLLRVEDMSVEDMMKRSFSEFRTQRELGAKDLPKVMKKCTDALNNLKATVEPCIRSEQSTIEEYQLLSAMASERSSDLLDYAMRSSKNARSVLWSKRGLVITHKKLVNAPAVVLRGHDDPGGRGATAAAQSAGGAQDFLRAARAQAQGSLPGALPTGEAEMKTLVLALCHEGFVKPAEATSAEKIAAESEPIDSFARPSGNVVMKRKGDDVGGWGGRAGGGXXXXXXXXXASSGRGSAKGKVLKAGTYGEAAGRTFAVLEVGLGDIVSLAKAVKKFNAEDVLGGDSTALASAVKSLVEMESTFPSERDPKGTFTPVNLANELKVQ 1237
BLAST of mRNA_Ecto-sp13_S_contig1329.2635.1 vs. uniprot
Match: A0A4D9CSQ0_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CSQ0_9STRA) HSP 1 Score: 461 bits (1187), Expect = 2.940e-146 Identity = 297/662 (44.86%), Postives = 384/662 (58.01%), Query Frame = 2
Query: 2 LSSVTLTTAKEKSEIHLFCATAVKRLQDQDAQLPQVLNLKEMLSRGVGVHHGGLLPILKASSEIVEICFSRGLVKVLFATETFAMGVNMPARTVVFNGTRKHDGKDFRDLLPGEYTQMAGRAGRRGLDKVGTVIITCWSEPPPLVNLKMMLTGAATKLESQFRLKWNMILNLLRVEDMSVEDMMKRSFSEFRTQRELGAKDLPKVMKKCTDALNNL-KATAEPCIRSEQSTIEEYQLLSAMASERSSDLLDYAMRSSKNA-RSVLGSKRGLIIT-HKKLVNAPAVVLRGHDEPGGRGSTAAAQSAGGAQDFLRAARAHAQGSLPGAVPTGEAEMKMLVLVLCHEGFVKPAGATSADKVAPESEPIDSFARPSGNVVMKRKDXXXXXWGGRTGGGXXWGGKAGKAVSGRGSAKGKVLKAGTYGEAAGRTFAVLEVGLGDIVSLAKAVKK--LNAEDVLG-GD-------------------STALASAVKTLVE-----------MESTLPSERDPKGTFTPLNLANELKVQEIGFRESSAELLNVLESRAASQCHTCPKLSEQYHLQQKRDKLERRIELLGHALSSEALSLFPDFQQRLGVLRSLGYVEGNT--VQLKGRVACEINTCDELIATEMVFENVLESLDPPEIAGILSALIFQEK 1873
L S L AKEKS++H+F ++A+KRLQ +D LPQV+ + ++ RG+GVHHGGLLP+LK EIVEI FSRGL+K+LFATETFAMGVNMPARTVVFN RKHDG+DFRDL PGEYTQMAGRAGRRGLDKVGTVIITCW E PPL L MLTG AT L SQFRL +NMILNLLR EDMS+EDM+KRSFSEF TQR LGA++LP ++K L + K PC+R + IE+Y S + +++ ++ A+ +K +S+LG R L +T LVN +V+RG + GG G GG Q M VL+LC EGF+ P + A + + +G V + +T GG SG + + + YG A R FAV + L D++ + +K ++E +L GD STA+ S + LV+ +S PS PLN ELK+ ++ F E+ + L E+ AS+CHTCP L QY +R ++E ++E + H LS+E+LSLFP+FQ RL VL +LGY++ T VQLKGRVACE+NTCDEL+ TE VFENVL L P EIAG+LS L+ QEK
Sbjct: 245 LGSEDLNAAKEKSQVHIFTSSAIKRLQAKDQDLPQVIRVLDLCKRGIGVHHGGLLPLLK---EIVEILFSRGLIKILFATETFAMGVNMPARTVVFNALRKHDGRDFRDLYPGEYTQMAGRAGRRGLDKVGTVIITCWKEVPPLPTLSRMLTGRATLLSSQFRLTYNMILNLLRTEDMSMEDMIKRSFSEFATQRALGARNLPLQLQKAEKVLEKIRKEGLAPCLRGDPPAIEDYYAQSRRTARQTTTVVAQALNLAKTGNKSMLGEGRFLKVTLPPALVNVWGLVVRGLE--GGEGGRE-----GGKQ-------------------------VMTVLILCPEGFLPPTAVEKEEAGAGRKKGERTETAEAGRVPLPPFGGKGLIPAPQTTGGTP------HTASGMTDEENREV----YGTAGSRHFAVRTISLEDVIFVTGRRRKDRFDSEKILAFGDALQRPTRQLATMSLPSLPVSTAIPSVIADLVKDLVACEEAEAHTQSLSPSSPPAALPLAPLNFPKELKINDLSFIEAYSRLQPEQEALFASKCHTCPILPAQYAHVHRRRRVEAKVESMRHLLSNESLSLFPEFQDRLRVLSALGYIDSTTQAVQLKGRVACEVNTCDELLLTETVFENVLAPLTPAEIAGLLSVLVCQEK 861
BLAST of mRNA_Ecto-sp13_S_contig1329.2635.1 vs. uniprot
Match: A0A1V9ZZV5_9STRA (DEAD/DEAH box RNA helicase (Fragment) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZZV5_9STRA) HSP 1 Score: 428 bits (1101), Expect = 6.330e-135 Identity = 283/670 (42.24%), Postives = 377/670 (56.27%), Query Frame = 2
Query: 2 LSSVTLTTAKEKSEIHLFCATAVKRLQDQDAQLPQVLNLKEMLSRGVGVHHGGLLPILKASSEIVEICFSRGLVKVLFATETFAMGVNMPARTVVFNGTRKHDGKDFRDLLPGEYTQMAGRAGRRGLDKVGTVIITCWSEPPPLVNLKMMLTGAATKLESQFRLKWNMILNLLRVEDMSVEDMMKRSFSEFRTQRELGAKDLPKVMKKCTDALN------------NLKATAEPCIRSEQSTIEEYQLLSAMASERSSDLLDYAMRSSKNARSVLGSKRGLIITHKKLVNAPAVVLRGHDEPGGRGSTAAAQSAGGAQDFLRAARAHAQGSLPGAVPTGEAEMKMLVLVLCHEGFVKPAGA--TSADKVAPESEPIDSFARPSGNVVMKRKDXXXXXWGGRTGGGXXWGGKAGKAVSGRGSAKGKVLKAGTYGEAAGRTFAVLEVGLGDIVSLAKAVKKLNAEDVLGG-DSTALASAVKTLVEMESTLPSERDPKGTFTPLNLANELKVQEIGFRESSAELLNVLESRAASQCHTCPKLSEQYHLQQKRDKLERRIELLGHALSSEALSLFPDFQQRLGVLRSLGYVE-GNTVQLKGRVACEINTCDELIATEMVFENVLESLDPPEIAGILSALIFQEKTQNEPPLTDRLQTAVAQARTRAVGIRVIHL 1963
L+ + L+++ E+SEIHLFC ++ RLQ D LPQVL ++EML RG+GVHHGGLLPILK E+VEI F+RGLVKVLF+TETFAMGVNMPARTVVFNGTRKHDGK FRDLLPGEYTQMAGRAGRRGLD VGTVII CW E +L+ ML G TKLESQFRL +NMILNLLRVEDM+VEDM+KRSFSEFRTQ+ L +K++P+ ++K AL +L AT + EQ +E + LL ++++ +L A+ +S+ + L R ++I+ L + A++L+ + G ++ + VL LCH GFV PA ++ D P++ PI + L GT G+ G+ + VLEV I L K N +L D+ L+ AV+ L+++ + +P DP+ ++LK+ E+ + +++ ++ C P L K D+L I ++ ALS+ +LSLFPDFQQRL VL LGY+ NTVQ+KGRVACE+NTC+ELI TE++FENVL L+P EI +LSALIFQEKTQN P LT RL A + A + +I L
Sbjct: 217 LAGMDLSSSSERSEIHLFCQASISRLQGLDQHLPQVLQVREMLLRGIGVHHGGLLPILK---EMVEILFARGLVKVLFSTETFAMGVNMPARTVVFNGTRKHDGKAFRDLLPGEYTQMAGRAGRRGLDTVGTVIIACWGEVADATSLRTMLMGQPTKLESQFRLTYNMILNLLRVEDMTVEDMIKRSFSEFRTQKALASKNIPETIQKAKKALYYIMNFILHALEADLNATHGIHLDLEQ--VERFFLLQ-QSTKQKEQVLVQAIVNSRFVSNALSIGRVIVISTSGLTDQLAIILQAN--------------------------------------LGTSKT-VTVLTLCHAGFVPPAVKKDSAMDFFKPKNAPISTG-----------------------------------------------LAVGTKGQLLGKHYVVLEVPCTCIDKLTKNKANTNVRGLLASMDAAVLSRAVELLIDLGNEVPLFLDPR---------SDLKMMELETADLYSQVQYQYTLMQSNVCFNSPFLVPVLVQYSKIDRLRHYIAMMTAALSNHSLSLFPDFQQRLRVLTRLGYIATDNTVQVKGRVACEVNTCEELILTEIIFENVLAELEPEEIVAVLSALIFQEKTQNAPTLTPRLVHAQNTVKAIATSLGLIQL 785
BLAST of mRNA_Ecto-sp13_S_contig1329.2635.1 vs. uniprot
Match: A0A067CLG9_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CLG9_SAPPC) HSP 1 Score: 436 bits (1120), Expect = 7.380e-134 Identity = 287/676 (42.46%), Postives = 375/676 (55.47%), Query Frame = 2
Query: 2 LSSVTLTTAKEKSEIHLFCATAVKRLQDQDAQLPQVLNLKEMLSRGVGVHHGGLLPILKASSEIVEICFSRGLVKVLFATETFAMGVNMPARTVVFNGTRKHDGKDFRDLLPGEYTQMAGRAGRRGLDKVGTVIITCWSEPPPLVNLKMMLTGAATKLESQFRLKWNMILNLLRVEDMSVEDMMKRSFSEFRTQRELGAKDLPKVMKKCTDALNNLKATAEPCIRS--EQSTIEEYQLLSAMASERSSDLLDYAMRSSKNARSVLGSKRGLIITHKKLVNAPAVVLRGHDEPGGRGSTAAAQSAGGAQDFLRAARAHAQGSLPGAVPTGEAEMKMLVLVLCHEGFVKPAGATSADKVAPESEPIDSFARPSGNVVMKRKDXXXXXWGGRTGGGXXWGGKAGKAVSGRGSAKGKVLKAGTYGEAAGRTFAVLEVGLGDIVSLAKA----VKKLNAEDVL-GGDSTALASAVKTLVEMESTLPSERDPKGTFTPLNLANELKVQEIGFRESSAELLNVLESRAASQCHTCPKLSEQYHLQQKRDKLERRIELLGHALSSEALSLFPDFQQRLGVLRSLGYVEG-NTVQLKGRVACEINTCDELIATEMVFENVLESLDPPEIAGILSALIFQEKTQNEPPLTDRLQTAVAQARTRAVGIRVIHLHRGLKSEITSLKRT 2005
LS + L+++ E+SEIHLFC ++ RLQ D LPQVL ++EML RG+GVHHGGLLPILK E+VEI F+RGLVKVLF+TETFAMGVNMPARTVVFNGTRKHDGK FRDLLPGEYTQMAGRAGRRGLD VGTVII CW + P +L+ ML G TKLESQFRL +NMILNLLRVEDM+VEDM+KRSFSEFRTQ+ L AKD+P ++K AL+ L+A + + +E + LL + L+ +A+ +S+ A + L R ++++ L + A++L+ A + VL LCH F P A A+PS K K G L G G G+ + VL+V + L K + N +L D + L+ AV+ LV++E++LP P+ N+LK+ E+ + +++ + AS C P L K D+L + + ALS+ +LSLFPDFQQRL VL LGY+ NTVQ+KGRVACE+NTC+EL+ TE++FENVL L+P EI +LSALIFQEKTQN+P LT RL A + A + VI L L+ + T +T
Sbjct: 631 LSGMDLSSSSERSEIHLFCNASISRLQGLDQHLPQVLQVREMLLRGIGVHHGGLLPILK---EMVEILFARGLVKVLFSTETFAMGVNMPARTVVFNGTRKHDGKAFRDLLPGEYTQMAGRAGRRGLDTVGTVIIACWGDAPDATSLRTMLMGTPTKLESQFRLTYNMILNLLRVEDMTVEDMIKRSFSEFRTQKALAAKDIPSAIQKAKKALHALEADLNTTHGGHLDLTEVERFFLLQQSTKYKEQALV-HAILNSRYAAAALCVGRVVVLSTTGLPDQLAILLQ---------------------------------------VDKAATRTVTVLALCHASFSPPVVA----------------AKPSAMDFFKPKAQASTSTG---------------------------LAPGAKGSLLGKHYVVLDVPETCLNKLTKVSGYRIASPNVRSLLEANDPSVLSRAVELLVDLETSLPLFLSPQ---------NDLKMMELESADLYSQVQHQYSVMEASPCFASPFLMPVLAQYAKIDRLRHYMATMTAALSNHSLSLFPDFQQRLRVLTRLGYIASDNTVQVKGRVACEVNTCEELVLTEIIFENVLADLEPEEIVAVLSALIFQEKTQNQPTLTPRLLHAQSTVHAIATSLGVIQLECHLEIDPTEFAKT 1211
BLAST of mRNA_Ecto-sp13_S_contig1329.2635.1 vs. uniprot
Match: A0A1V9ZLM2_9STRA (DEAD/DEAH box RNA helicase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZLM2_9STRA) HSP 1 Score: 430 bits (1106), Expect = 1.290e-131 Identity = 293/660 (44.39%), Postives = 379/660 (57.42%), Query Frame = 2
Query: 2 LSSVTLTTAKEKSEIHLFCATAVKRLQDQDAQLPQVLNLKEMLSRGVGVHHGGLLPILKASSEIVEICFSRGLVKVLFATETFAMGVNMPARTVVFNGTRKHDGKDFRDLLPGEYTQMAGRAGRRGLDKVGTVIITCWSEPPPLVNLKMMLTGAATKLESQFRLKWNMILNLLRVEDMSVEDMMKRSFSEFRTQRELGAKDLPKVMKKCTDALNNLKA--TAEPCIRSEQSTIEEYQLL--SAMASERSSDLLDYAMRSSKNARSVLGSKRGLIITHKKLVNAPAVVLRGHDEPGGRGSTAAAQSAGGAQDFLRAARAHAQGSLPGAVPTGEAEMKMLVLVLCHEGFVKPAGATSADKVAPESEPIDSFARPSGNVVMKRKDXXXXXWGGRTGGGXXWGGKAGKAVSGRGSAKGKVLKAGTYGEAAGRTFAVLEVGLGDIVSLAKAVKKLNAEDVLGG-DSTALASAVKTLVEMESTLPSERDPKGTFTPLNLANELKVQEIGFRESSAELLNVLESRAASQCHTCPKLSEQYHLQQKRDKLERRIELLGHALSSEALSLFPDFQQRLGVLRSLGYVE-GNTVQLKGRVACEINTCDELIATEMVFENVLESLDPPEIAGILSALIFQEKTQNEPPLTDRLQTAVAQARTRAVGIRVIHL 1963
L+ + L+++ E+SEIHLFC ++ RLQ D LPQVL ++EML RG+GVHHGGLLPILK E+VEI F+RGLVKVLF+TETFAMGVNMPARTVVFNGTRKHDGK FRDLLPGEYTQMAGRAGRRGLD VGTVII CW E P +L+ ML G TKLESQFRL +NMILNLLRVEDM+VEDM+KRSFSEFRTQ+ L A+++P+ ++K L+ L+A A + +E + LL S A ER+ L +A+ +S+ A + L R +++T LV+ A+VL+ D+ R +T VL LC FV P K AP + F +P KA + G L AG G G+ +AVL+V I L K + ++ D+ L+ AV+ LV++E+ LP DP+ +LK+ E+ + +++ + AAS C P L K D+L + + ALS+ +LSLFPDFQQRL VL LGY+ NTVQ+KGRVACE+NTC+EL+ TE++FENVL L+P EI +LSALIFQEKTQN P LT RL A + A + +I L
Sbjct: 667 LAGMDLSSSSERSEIHLFCQASISRLQGLDQHLPQVLQVREMLLRGIGVHHGGLLPILK---EMVEILFARGLVKVLFSTETFAMGVNMPARTVVFNGTRKHDGKAFRDLLPGEYTQMAGRAGRRGLDTVGTVIIACWGEVPDGTSLRTMLMGQPTKLESQFRLTYNMILNLLRVEDMTVEDMIKRSFSEFRTQKALAARNIPQAIQKAKKLLHALEADVAATHGGHLDLVEVERFFLLQQSTKAKERA---LVHAVLNSRYAPAALCVGRVVVVTTAGLVDQLAIVLQ-VDKTAARTAT--------------------------------------VLALCPATFVPPV-----TKKAPSAM---DFFKP-------------------------------KAAATTG------LAAGATGALLGKHYAVLDVPESCIDKLTKHKAAASVRQLVDATDAGVLSRAVELLVDLEAQLPLFLDPR---------TDLKMLELESADLYSQVSHQYTLMAASPCFASPFLMPVLAQYAKIDRLRLYMATMTAALSNHSLSLFPDFQQRLRVLTRLGYIATDNTVQVKGRVACEVNTCEELVLTEIIFENVLAELEPEEIVAVLSALIFQEKTQNAPTLTPRLLHAQTTVQAIATSLGLIQL 1227
BLAST of mRNA_Ecto-sp13_S_contig1329.2635.1 vs. uniprot
Match: K8YWY6_NANGC (Antiviral helicase SKI2 (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YWY6_NANGC) HSP 1 Score: 409 bits (1051), Expect = 3.270e-129 Identity = 275/667 (41.23%), Postives = 362/667 (54.27%), Query Frame = 2
Query: 44 IHLFCATAVKRLQDQDAQLPQVLNLKEMLSRGVGVHHGGLLPILKASSEIVEICFSRGLVKVLFATETFAMGVNMPARTVVFNGTRKHDGKDFRDLLPGEYTQMAGRAGRRGLDKVGTVIITCWSEPPPLVNLKMMLTGAATKLESQFRLKWNM---------------------ILNLLRVEDMSVEDMMKRSFSEFRTQRELGAKDLPKVMKKCTDALNNL-KATAEPCIRSEQSTIEEYQLLSAMASERSSDLLDYAMRSSKN-ARSVLGSKRGLIIT-HKKLVNAPAVVLRGHDEPGGRGSTAAAQSAGGAQDFLRAARAHAQGSLPGAVPTGEAEMKMLVLVLCHEGFVKPAGATSADKVAPESEPIDSFARPSGNVVMKRKDXXXXXWGGRTGGGXXWGGKAGKAVSGRGSAKGKVLKAGTYGEAAGRTFAVLEVGLGDIVSLAKAVKK--LNAEDVLG-GDS---------------------TALASAVKTLVEME-------STLPSERDPKGTFTPLNLANELKVQEIGFRESSAELLNVLESRAASQCHTCPKLSEQYHLQQKRDKLERRIELLGHALSSEALSLFPDFQQRLGVLRSLGYVEGNT--VQLKGRVACEINTCDELIATEMVFENVLESLDPPEIAGILSALIFQEK 1873
+H+F ++A+KRLQ +D LPQV+ + ++ RG+GVHHGGLLP+LK EIVEI FSRGL+K+LFATETFAMGVNMPARTVVFN RKHDG+DFRDL PGEYTQMAGRAGRRGLDKVGTVIITCW E PPL L MLTG AT L SQFRL +NM ILNLLR EDMS+EDM+KRSFSEF TQR LGA++LP ++K L + K PC+R + IE+Y S + +++ ++ A+ +K ++S+LG R L +T LVN +V+RG + S + G P + G+ + G+ + G D GG+ G ++ + + YG A R FA+ + L D++ + +K ++E +L GD+ + +A VK LV E S PS PLN ELK+ ++ F E+ + L E+ AS+CHTCP L QY +R ++E ++E + H LS+E+LSLFP+FQ RL VL +LGY++ T VQLKGRVACE+NTCDEL+ TE VFENVL L P EIAG+LS L+ QEK
Sbjct: 1 VHIFTSSAIKRLQAKDQDLPQVIRVLDLCKRGIGVHHGGLLPLLK---EIVEILFSRGLIKILFATETFAMGVNMPARTVVFNALRKHDGRDFRDLYPGEYTQMAGRAGRRGLDKVGTVIITCWKEVPPLPTLSRMLTGRATLLSSQFRLTYNMVREGGMKEGKRERNLGGRAGFILNLLRTEDMSMEDMIKRSFSEFATQRALGARNLPLQLQKAEKILGKIRKEGLAPCLRGDPPAIEDYYAQSRRTARQTTTVVAQALNLAKTGSKSMLGEGRFLKVTLPPALVNVWGLVVRGLEGXXXXDSVS--------------------GGFPPSHVGGQGGSR---------GWEEERGENRDD-----------------------------------------GGQKGPGMTDEENRE-------VYGTAGSRHFALRTLSLEDVILVTGRRRKDRFDSEKILAFGDALQRPTHQLATTSLPTFSVSTPSVIADLVKDLVACEEAEAHTQSLSPSSPPAVLPLAPLNFPKELKINDLSFIEAYSRLQPEQEALFASKCHTCPILPAQYAHVHRRRRVEAKVESMRHLLSNESLSLFPEFQDRLRVLSALGYIDPTTQAVQLKGRVACEVNTCDELLLTETVFENVLAPLTPAEIAGLLSVLVCQEK 587
BLAST of mRNA_Ecto-sp13_S_contig1329.2635.1 vs. uniprot
Match: D0N907_PHYIT (DEAD/DEAH box RNA helicase, putative n=14 Tax=Phytophthora TaxID=4783 RepID=D0N907_PHYIT) HSP 1 Score: 420 bits (1080), Expect = 1.540e-127 Identity = 286/690 (41.45%), Postives = 399/690 (57.83%), Query Frame = 2
Query: 2 LSSVTLTTAKEKSEIHLFCATAVKRLQDQDAQLPQVLNLKEMLSRGVGVHHGGLLPILKASSEIVEICFSRGLVKVLFATETFAMGVNMPARTVVFNGTRKHDGKDFRDLLPGEYTQMAGRAGRRGLDKVGTVIITCWSEPPPLVNLKMMLTGAATKLESQFRLKWNMILNLLRVEDMSVEDMMKRSFSEFRTQRELGAKDLPKVMKKCTDALNNLKATAEPCIRSEQSTIEEYQLLSA-------------------MASERSSDLLDYAMRSSKNA----RSVLGSKRGLIITHKKLVNAPAVVLRGHDEPGGRGSTAAAQSAGGAQDFLRAARAHAQGSLPGAVPTGEAEMKM----LVLVLCHEGFVKPAGATSADKVAPESEPIDSFARPSGNVVMKRKDXXXXXWGGRTGGGXXWGGKAGKAVSGRGSAKGKVLKAGTYGEAAGRTFAVLEVGLGDIVSLAKAV-KKLNAEDVLGGDSTA-LASAVKTLVEMESTLPSERDPKGTFTPLNLANELKVQEIGFRESSAELLNVLESRAASQCHT-CPKLSEQYHLQQKRDKLERRIELLGHALSSEALSLFPDFQQRLGVLRSLGYV-EGNTVQLKGRVACEINTCDELIATEMVFENVLESLDPPEIAGILSALIFQEKTQNEPPLTDRLQTAVAQARTRAVGIRVIHLHRGLK 1978
L+ + L+T E+SEIHLF T+V+RLQ D +LPQVL +KEML RG+GVHHGGLLPI+K E+VEI F RGLVKVLF+TETFAMGVNMPARTVVFNG RKHDGK+FRDL+PGEYTQMAGRAGRRGLD VGTVII CW++ P +L+ ML G AT L SQFRL +NM+LNLLRVE ++VEDMMKRSFSEF TQ+ L +K+LP+++ K L L E+S +E+Y L A + + + LL ++++KNA R VL + +GL H A+V+R +TAA G A+ L + LP + A+ ++ +V+ LC + + P ++ E++ + A G ++ +KD +G + GK + S + L A + G GR +AVLEV + S+ V +N + ++ S LAS+++ L +++ + + K ++L ELKV ++ + + + C T P +S K KL+ + + LS+++LSLFPDFQQRL VL+ LGY+ + VQ+KGRVACEINTC+EL+ TEM+FENVL +L+P EI +LSALIFQEK+Q+EP LT L+T + A + +I L + L+
Sbjct: 645 LAKLDLSTPSERSEIHLFLETSVQRLQGSDRELPQVLTMKEMLKRGIGVHHGGLLPIIK---EMVEILFGRGLVKVLFSTETFAMGVNMPARTVVFNGIRKHDGKNFRDLVPGEYTQMAGRAGRRGLDSVGTVIIACWNDVPEATSLRTMLAGKATSLSSQFRLTYNMMLNLLRVEVLTVEDMMKRSFSEFHTQKALASKNLPQLIHKGKTLLQQL----------ERSLVEDYPHLEASGELAQMQAFYQLKRDKRELEKKLTKWLLANNLQAAKNAIAPGRVVLVNVKGLSSDHL------ALVVR---------TTAAVVGEGTARSKLAF-----ETELPSSGTRDAAQRRVFKSIMVVTLCSDDYEPPKV-----EIPSETKKKNLHALTGGRMLRSKKDDDDRMFG-----------RMGKKDTAD-SQESAELTAPSTGTLLGRKYAVLEVPESCVESVTSLVASSINTKTLVASSSKKELASSIEFLTQLDKDAAATQ--KAAIPYVDLMRELKVNDLEVATGYTQWQQLYSLVVSHPCATDSPSVSRVMKKVDKMFKLQAYLVRMTRQLSNDSLSLFPDFQQRLSVLKRLGYISDDGVVQVKGRVACEINTCEELVLTEMIFENVLATLEPEEIVAVLSALIFQEKSQSEPTLTPTLETTREVVKNIAESLGLIQLEQRLE 1282
BLAST of mRNA_Ecto-sp13_S_contig1329.2635.1 vs. uniprot
Match: A0A225WSS8_9STRA (DEAD/DEAH box RNA helicase n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WSS8_9STRA) HSP 1 Score: 420 bits (1080), Expect = 3.160e-127 Identity = 285/674 (42.28%), Postives = 395/674 (58.61%), Query Frame = 2
Query: 2 LSSVTLTTAKEKSEIHLFCATAVKRLQDQDAQLPQVLNLKEMLSRGVGVHHGGLLPILKASSEIVEICFSRGLVKVLFATETFAMGVNMPARTVVFNGTRKHDGKDFRDLLPGEYTQMAGRAGRRGLDKVGTVIITCWSEPPPLVNLKMMLTGAATKLESQFRLKWNMILNLLRVEDMSVEDMMKRSFSEFRTQRELGAKDLPKVMKKCTDALNNLKATAE---PCIRS--EQSTIEEYQLLSAMASERSSDLLDYAMRSS-KNARSVLGSKRGLIITHKKLVNAP-AVVLRGHDEPGGRGSTAAAQSAGGAQDFLRAARAHAQGSLPGAVPTGEAEMKMLVLVLCHEGFVKPAGATSADKVAPESEPIDSFARP----SGNVVMKRKDXXXXXWGGRTGGGXXWGGKAGKAVSGRGSAKGKVLKAGTYGEAAGRTFAVLEVGLGDIVSLAKAVKK-LNAEDVLGGDSTA-LASAVKTLVEMESTLPSERDPKGTFTPLNLANELKVQEIGFRESSAELLNVLESRAASQCHT-CPKLSEQYHLQQKRDKLERRIELLGHALSSEALSLFPDFQQRLGVLRSLGYV-EGNTVQLKGRVACEINTCDELIATEMVFENVLESLDPPEIAGILSALIFQEKTQNEPPLTDRLQTAVAQARTRAVGIRVIHLHRGLK 1978
L+ + L+T E+SEIHLF T+V+RLQ D +LPQVL +KEML RG+GVHHGGLLPI+K E+VEI F RGLVKVLF+TETFAMGVNMPARTVVFNG RKHDGK+FRDLLPGEYTQMAGRAGRRGLD VGTVII CW++ P +L+ ML G AT L SQFRL +NMILNLLRVE ++VEDMMKRSFSEF TQ+ L +K++PK+++K L LK + P + + E + ++E+ L E L + + ++ + A++ + R +I+ K L + A+V+R + G G TA ++ + Q S G ++V+ LC + + P P DS P SG ++ +KD GR G K GK S + L A + G+ +AVLEV + S+ V +N + ++ S LAS+++ L ++E + + K +++ ELKV ++ + + + C T P +S +K KL+ + + LS+++LSLFPDFQQRL VL+ LGY+ E VQ+KGRVACEINTC+EL+ TEM+FENVL +L+P EI +LSALIFQEK+Q+EP LT L+ + + A + +I L + L+
Sbjct: 693 LAKLDLSTPSERSEIHLFLETSVQRLQGSDRELPQVLTMKEMLKRGIGVHHGGLLPIIK---EMVEILFGRGLVKVLFSTETFAMGVNMPARTVVFNGIRKHDGKNFRDLLPGEYTQMAGRAGRRGLDSVGTVIIACWNDVPEPTSLRTMLAGKATSLSSQFRLTYNMILNLLRVEVLTVEDMMKRSFSEFHTQKALASKNIPKLIQKGKTLLQQLKRSLVEDYPHLEANGELAQMQEFYQLKRDKRELEKKLTKWLLTNNIQAAKTAIAPGRIVILNVKGLPSDQLALVVRTNAAMIGEGGTARSKLS---------FETELQNSTIGDTSHKGVFKSIMVISLCPDDYEPPKAKV----------PKDSKKSPHTLGSGRMLRSKKDDDDDRMFGRMG-------KKGKVES----QESGELSAPSTATLLGKKYAVLEVPESCVESVTCMVASAVNIKTLVASSSKKELASSIEFLTKLEKDAATTQ--KAAIAYVDVMGELKVNDLEVATGYTQWQQMYSMVLSHPCATDSPSVSRVMGKVEKIFKLKAYLMRMTQELSNDSLSLFPDFQQRLSVLKRLGYISEDGVVQVKGRVACEINTCEELVLTEMIFENVLANLEPEEIVAVLSALIFQEKSQSEPTLTPTLENSREVVKNIAESLGLIQLEQHLE 1331
BLAST of mRNA_Ecto-sp13_S_contig1329.2635.1 vs. uniprot
Match: A0A3R7NEF4_9STRA (Uncharacterized protein n=5 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7NEF4_9STRA) HSP 1 Score: 410 bits (1055), Expect = 6.180e-124 Identity = 283/677 (41.80%), Postives = 394/677 (58.20%), Query Frame = 2
Query: 2 LSSVTLTTAKEKSEIHLFCATAVKRLQDQDAQLPQVLNLKEMLSRGVGVHHGGLLPILKASSEIVEICFSRGLVKVLFATETFAMGVNMPARTVVFNGTRKHDGKDFRDLLPGEYTQMAGRAGRRGLDKVGTVIITCWSEPPPLVNLKMMLTGAATKLESQFRLKWNMILNLLRVEDMSVEDMMKRSFSEFRTQRELGAKDLPKVMKKCTDALNNLKATAE---PCIRS--EQSTIEEYQLLSAMASERSSDLLDYAMRSS-KNARSVLGSKRGLIITHKKLVNAP-AVVLRGHDEPGGRGSTAAAQSAGGAQDFLRAARAHAQGSLPGAVPTGEAEM----KMLVLVLCHEGFVKPAGATSADKVAPESEPIDSFARPSGNVVMKRKDXXXXXWGGRTGGGXXWGGKAGKAVSGRGSAKGKVLKAGTYGEAAGRTFAVLEVGLGDIVSLAKAVKK-LNAEDVLGGDSTA-LASAVKTLVEMESTLPSERDPKGTFTPLNLANELKVQEIGFRESSAELLNVLESRAASQCHTC----PKLSEQYHLQQKRDKLERRIELLGHALSSEALSLFPDFQQRLGVLRSLGYV-EGNTVQLKGRVACEINTCDELIATEMVFENVLESLDPPEIAGILSALIFQEKTQNEPPLTDRLQTAVAQARTRAVGIRVIHLHRGLK 1978
LS + L+T E+SEIHLF T+V+RLQ D +LPQVL +KEML RG+GVHHGGLLPI+K E+VEI F RGLVKVLF+TETFAMGVNMPARTVVFNG RKHDGK+FRDLLPGEYTQMAGRAGRRGLD VGTVII CW++ P +L+ ML G AT L SQFRL +NMILNLLRVE ++VEDMMKRSFSEF TQ+ L AK++PK+++K L L+ + P + + E + ++E+ L E L + + ++ + A++ + R +I+ K L + A+V+R G G T+ ++ + + L + T ++V+ LC + + P S GR G K GK+ S + SA+ L A G+ +AVLEV + S+ V +N + ++ S LAS+++ LV++E S K + ++L ELKV ++ A+ + + CH C P +S +K KL+ + + LS+++LSLFPDFQQRL VL+ LGY+ + VQ+KGRVACEINTC+EL+ TEM+FENVL +L+P EI +LSALIFQEK+Q+EP LT +L+++ ++ A + +I L + L+
Sbjct: 647 LSKLDLSTPSERSEIHLFLETSVQRLQGSDRELPQVLTMKEMLKRGIGVHHGGLLPIIK---EMVEILFGRGLVKVLFSTETFAMGVNMPARTVVFNGIRKHDGKNFRDLLPGEYTQMAGRAGRRGLDSVGTVIIACWNDVPEPTSLRTMLAGKATSLSSQFRLTYNMILNLLRVEVLTVEDMMKRSFSEFHTQKALAAKNIPKLIQKGKTLLQQLERSLVEDYPHLETSGELAQMQEFYQLKREKRELEKKLTKWLLANNIQAAKNAIAPGRIVILNVKGLPSDQLALVVRTSSAMVGEGGTSRSKLS-------------FESELQNSTVTDRGHKGVFKSIMVVTLCPDEYEPPKVEASXXXXXXXXXXXXXXXXXXXXXXXXXXXRMF----GRMG-------KKGKSES-QESAE---LTAPATATLLGKKYAVLEVPESCVESVTSVVASGVNTKTLVASSSKKELASSIEFLVQIEKE--SATTQKASIAFVDLMGELKVNDLEVATGYAQWQQLY---SMVLCHPCITDSPSVSRVMSKVEKIFKLKAYLVRMTRELSNDSLSLFPDFQQRLSVLKRLGYISDDGVVQVKGRVACEINTCEELVLTEMIFENVLANLEPEEIVAVLSALIFQEKSQSEPTLTPQLESSREVVKSIAESLGLIQLEQHLE 1287 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1329.2635.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1329.2635.1 >prot_Ecto-sp13_S_contig1329.2635.1 ID=prot_Ecto-sp13_S_contig1329.2635.1|Name=mRNA_Ecto-sp13_S_contig1329.2635.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=628bp MLSRGVGVHHGGLLPILKASSEIVEICFSRGLVKVLFATETFAMGVNMPAback to top mRNA from alignment at Ecto-sp13_S_contig1329:2..12389+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1329.2635.1 ID=mRNA_Ecto-sp13_S_contig1329.2635.1|Name=mRNA_Ecto-sp13_S_contig1329.2635.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=12388bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1329:2..12389+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1329:2..12389+ >mRNA_Ecto-sp13_S_contig1329.2635.1 ID=mRNA_Ecto-sp13_S_contig1329.2635.1|Name=mRNA_Ecto-sp13_S_contig1329.2635.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1884bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1329:2..12389+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |