mRNA_Ecto-sp13_S_contig1329.2635.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig1329.2635.1
Unique NamemRNA_Ecto-sp13_S_contig1329.2635.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig1329.2635.1 vs. uniprot
Match: D7FJL2_ECTSI (DEAD box helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJL2_ECTSI)

HSP 1 Score: 1160 bits (3002), Expect = 0.000e+0
Identity = 616/641 (96.10%), Postives = 620/641 (96.72%), Query Frame = 2
Query:    2 LSSVTLTTAKEKSEIHLFCATAVKRLQDQDAQLPQVLNLKEMLSRGVGVHHGGLLPILKASSEIVEICFSRGLVKVLFATETFAMGVNMPARTVVFNGTRKHDGKDFRDLLPGEYTQMAGRAGRRGLDKVGTVIITCWSEPPPLVNLKMMLTGAATKLESQFRLKWNMILNLLRVEDMSVEDMMKRSFSEFRTQRELGAKDLPKVMKKCTDALNNLKATAEPCIRSEQSTIEEYQLLSAMASERSSDLLDYAMRSSKNARSVLGSKRGLIITHKKLVNAPAVVLRGHDEPGGRGSTAAAQSAGGAQDFLRAARAHAQGSLPGAVPTGEAEMKMLVLVLCHEGFVKPAGATSADKVAPESEPIDSFARPSGNVVMKRKDXXXXXWGGRTGGGXXWGGKAGKAVSGRGSAKGKVLKAGTYGEAAGRTFAVLEVGLGDIVSLAKAVKKLNAEDVLGGDSTALASAVKTLVEMESTLPSERDPKGTFTPLNLANELKVQEIGFRESSAELLNVLESRAASQCHTCPKLSEQYHLQQKRDKLERRIELLGHALSSEALSLFPDFQQRLGVLRSLGYVEGNTVQLKGRVACEINTCDELIATEMVFENVLESLDPPEIAGILSALIFQEKTQNEPPLTDRLQTAVAQ 1924
            LSSVTLTTAKEKSEIHLFCATAVKRLQDQDAQLPQVLNLKEMLSRG+GVHHGGLLPILK   EIVEICFSRGLVKVLFATETFAMGVNMPARTVVFNGTRKHDGKDFRDLLPGEYTQMAGRAGRRGLDKVGTVIITCWSEPPPLVNLKMMLTGAATKLESQFRLKWNMILNLLRVEDMSVEDMMKRSFSEFRTQRELGAKDLPKVMKKCTDALNNLKATAEPCIRSEQSTIEEYQLLSAMASERSSDLLDYAMRSSKNARSVLGSKRGL+ITHKKLVNAPAVVLRGHD+PGGRGSTAA QSAGGAQDFLRAARA AQGSLPGAVP GE EMKMLVLVLCHEGFV PA ATSADKVA ESEPIDSFARPSGNVVMKRK      WGGR GGGXX   KAGKA SGRGSAKGKVLKAGTYGEAAGRTFAVLEVGLGDIVSLAKAVKKLNAEDVLGGDSTALASAVKTLVEMESTLPSERDPKGTFTP+NLANELKVQEIGFRESSAELLNVLESRAASQCHTCPKLSEQYHLQQKRDKLERRIELLGHALSSEALSLFPDFQQRLGVLRSLGYVEGNTVQLKGRVACEINTCDELIATEMVFENVLESLDPPEIAGILSALIFQEKTQNEPPLTDRLQTAVAQ
Sbjct:  883 LSSVTLTTAKEKSEIHLFCATAVKRLQDQDAQLPQVLNLKEMLSRGIGVHHGGLLPILK---EIVEICFSRGLVKVLFATETFAMGVNMPARTVVFNGTRKHDGKDFRDLLPGEYTQMAGRAGRRGLDKVGTVIITCWSEPPPLVNLKMMLTGAATKLESQFRLKWNMILNLLRVEDMSVEDMMKRSFSEFRTQRELGAKDLPKVMKKCTDALNNLKATAEPCIRSEQSTIEEYQLLSAMASERSSDLLDYAMRSSKNARSVLGSKRGLVITHKKLVNAPAVVLRGHDDPGGRGSTAATQSAGGAQDFLRAARAQAQGSLPGAVPAGEVEMKMLVLVLCHEGFVTPAEATSADKVAAESEPIDSFARPSGNVVMKRKGDDDGGWGGRAGGGXXXXXKAGKASSGRGSAKGKVLKAGTYGEAAGRTFAVLEVGLGDIVSLAKAVKKLNAEDVLGGDSTALASAVKTLVEMESTLPSERDPKGTFTPVNLANELKVQEIGFRESSAELLNVLESRAASQCHTCPKLSEQYHLQQKRDKLERRIELLGHALSSEALSLFPDFQQRLGVLRSLGYVEGNTVQLKGRVACEINTCDELIATEMVFENVLESLDPPEIAGILSALIFQEKTQNEPPLTDRLQTAVAQ 1520          
BLAST of mRNA_Ecto-sp13_S_contig1329.2635.1 vs. uniprot
Match: A0A6H5KP96_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP96_9PHAE)

HSP 1 Score: 857 bits (2213), Expect = 7.000e-297
Identity = 458/495 (92.53%), Postives = 466/495 (94.14%), Query Frame = 2
Query:    2 LSSVTLTTAKEKSEIHLFCATAVKRLQDQDAQLPQVLNLKEMLSRGVGVHHGGLLPILKASSEIVEICFSRGLVKVLFATETFAMGVNMPARTVVFNGTRKHDGKDFRDLLPGEYTQMAGRAGRRGLDKVGTVIITCWSEPPPLVNLKMMLTGAATKLESQFRLKWNMILNLLRVEDMSVEDMMKRSFSEFRTQRELGAKDLPKVMKKCTDALNNLKATAEPCIRSEQSTIEEYQLLSAMASERSSDLLDYAMRSSKNARSVLGSKRGLIITHKKLVNAPAVVLRGHDEPGGRGSTAAAQSAGGAQDFLRAARAHAQGSLPGAVPTGEAEMKMLVLVLCHEGFVKPAGATSADKVAPESEPIDSFARPSGNVVMKRKDXXXXXWGGRTGGGXXWGGKAGKAVSGRGSAKGKVLKAGTYGEAAGRTFAVLEVGLGDIVSLAKAVKKLNAEDVLGGDSTALASAVKTLVEMESTLPSERDPKGTFTPLNLANELKVQ 1486
            LSSVTLTTAKEKSEIHLFCATAVKRLQDQDAQLPQVL LKEMLSRGVGVHHGGLLPILKASSEIVEICFSRGLVKVLFATETFAMGVNMPARTVVFNGTRKHDGKDFRDLLPGEYTQMAGRAGRRGLDKVGTVIITCWSEPPPL    MMLTGAATKLESQFRLKWNMILNLLRVEDMSVEDMMKRSFSEFRTQRELGAKDLPKVMKKCTDALNNLKAT EPCIRSEQSTIEEYQLLSAMASERSSDLLDYAMRSSKNARSVL SKRGL+ITHKKLVNAPAVVLRGHD+PGGRG+TAAAQSAGGAQDFLRAARA AQGSLPGA+PTGEAEMK LVL LCHEGFVKPA ATSA+K+A ESEPIDSFARPSGNVVMKRK      WGGR GGGXX       A SGRGSAKGKVLKAGTYGEAAGRTFAVLEVGLGDIVSLAKAVKK NAEDVLGGDSTALASAVK+LVEMEST PSERDPKGTFTP+NLANELKVQ
Sbjct:  747 LSSVTLTTAKEKSEIHLFCATAVKRLQDQDAQLPQVLKLKEMLSRGVGVHHGGLLPILKASSEIVEICFSRGLVKVLFATETFAMGVNMPARTVVFNGTRKHDGKDFRDLLPGEYTQMAGRAGRRGLDKVGTVIITCWSEPPPL----MMLTGAATKLESQFRLKWNMILNLLRVEDMSVEDMMKRSFSEFRTQRELGAKDLPKVMKKCTDALNNLKATVEPCIRSEQSTIEEYQLLSAMASERSSDLLDYAMRSSKNARSVLWSKRGLVITHKKLVNAPAVVLRGHDDPGGRGATAAAQSAGGAQDFLRAARAQAQGSLPGALPTGEAEMKTLVLALCHEGFVKPAEATSAEKIAAESEPIDSFARPSGNVVMKRKGDDVGGWGGRAGGGXXXXXXXXXASSGRGSAKGKVLKAGTYGEAAGRTFAVLEVGLGDIVSLAKAVKKFNAEDVLGGDSTALASAVKSLVEMESTFPSERDPKGTFTPVNLANELKVQ 1237          
BLAST of mRNA_Ecto-sp13_S_contig1329.2635.1 vs. uniprot
Match: A0A4D9CSQ0_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CSQ0_9STRA)

HSP 1 Score: 461 bits (1187), Expect = 2.940e-146
Identity = 297/662 (44.86%), Postives = 384/662 (58.01%), Query Frame = 2
Query:    2 LSSVTLTTAKEKSEIHLFCATAVKRLQDQDAQLPQVLNLKEMLSRGVGVHHGGLLPILKASSEIVEICFSRGLVKVLFATETFAMGVNMPARTVVFNGTRKHDGKDFRDLLPGEYTQMAGRAGRRGLDKVGTVIITCWSEPPPLVNLKMMLTGAATKLESQFRLKWNMILNLLRVEDMSVEDMMKRSFSEFRTQRELGAKDLPKVMKKCTDALNNL-KATAEPCIRSEQSTIEEYQLLSAMASERSSDLLDYAMRSSKNA-RSVLGSKRGLIIT-HKKLVNAPAVVLRGHDEPGGRGSTAAAQSAGGAQDFLRAARAHAQGSLPGAVPTGEAEMKMLVLVLCHEGFVKPAGATSADKVAPESEPIDSFARPSGNVVMKRKDXXXXXWGGRTGGGXXWGGKAGKAVSGRGSAKGKVLKAGTYGEAAGRTFAVLEVGLGDIVSLAKAVKK--LNAEDVLG-GD-------------------STALASAVKTLVE-----------MESTLPSERDPKGTFTPLNLANELKVQEIGFRESSAELLNVLESRAASQCHTCPKLSEQYHLQQKRDKLERRIELLGHALSSEALSLFPDFQQRLGVLRSLGYVEGNT--VQLKGRVACEINTCDELIATEMVFENVLESLDPPEIAGILSALIFQEK 1873
            L S  L  AKEKS++H+F ++A+KRLQ +D  LPQV+ + ++  RG+GVHHGGLLP+LK   EIVEI FSRGL+K+LFATETFAMGVNMPARTVVFN  RKHDG+DFRDL PGEYTQMAGRAGRRGLDKVGTVIITCW E PPL  L  MLTG AT L SQFRL +NMILNLLR EDMS+EDM+KRSFSEF TQR LGA++LP  ++K    L  + K    PC+R +   IE+Y   S   + +++ ++  A+  +K   +S+LG  R L +T    LVN   +V+RG +  GG G        GG Q                          M VL+LC EGF+ P      +  A   +   +    +G V +            +T GG           SG    + + +    YG A  R FAV  + L D++ +    +K   ++E +L  GD                   STA+ S +  LV+            +S  PS         PLN   ELK+ ++ F E+ + L    E+  AS+CHTCP L  QY    +R ++E ++E + H LS+E+LSLFP+FQ RL VL +LGY++  T  VQLKGRVACE+NTCDEL+ TE VFENVL  L P EIAG+LS L+ QEK
Sbjct:  245 LGSEDLNAAKEKSQVHIFTSSAIKRLQAKDQDLPQVIRVLDLCKRGIGVHHGGLLPLLK---EIVEILFSRGLIKILFATETFAMGVNMPARTVVFNALRKHDGRDFRDLYPGEYTQMAGRAGRRGLDKVGTVIITCWKEVPPLPTLSRMLTGRATLLSSQFRLTYNMILNLLRTEDMSMEDMIKRSFSEFATQRALGARNLPLQLQKAEKVLEKIRKEGLAPCLRGDPPAIEDYYAQSRRTARQTTTVVAQALNLAKTGNKSMLGEGRFLKVTLPPALVNVWGLVVRGLE--GGEGGRE-----GGKQ-------------------------VMTVLILCPEGFLPPTAVEKEEAGAGRKKGERTETAEAGRVPLPPFGGKGLIPAPQTTGGTP------HTASGMTDEENREV----YGTAGSRHFAVRTISLEDVIFVTGRRRKDRFDSEKILAFGDALQRPTRQLATMSLPSLPVSTAIPSVIADLVKDLVACEEAEAHTQSLSPSSPPAALPLAPLNFPKELKINDLSFIEAYSRLQPEQEALFASKCHTCPILPAQYAHVHRRRRVEAKVESMRHLLSNESLSLFPEFQDRLRVLSALGYIDSTTQAVQLKGRVACEVNTCDELLLTETVFENVLAPLTPAEIAGLLSVLVCQEK 861          
BLAST of mRNA_Ecto-sp13_S_contig1329.2635.1 vs. uniprot
Match: A0A1V9ZZV5_9STRA (DEAD/DEAH box RNA helicase (Fragment) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZZV5_9STRA)

HSP 1 Score: 428 bits (1101), Expect = 6.330e-135
Identity = 283/670 (42.24%), Postives = 377/670 (56.27%), Query Frame = 2
Query:    2 LSSVTLTTAKEKSEIHLFCATAVKRLQDQDAQLPQVLNLKEMLSRGVGVHHGGLLPILKASSEIVEICFSRGLVKVLFATETFAMGVNMPARTVVFNGTRKHDGKDFRDLLPGEYTQMAGRAGRRGLDKVGTVIITCWSEPPPLVNLKMMLTGAATKLESQFRLKWNMILNLLRVEDMSVEDMMKRSFSEFRTQRELGAKDLPKVMKKCTDALN------------NLKATAEPCIRSEQSTIEEYQLLSAMASERSSDLLDYAMRSSKNARSVLGSKRGLIITHKKLVNAPAVVLRGHDEPGGRGSTAAAQSAGGAQDFLRAARAHAQGSLPGAVPTGEAEMKMLVLVLCHEGFVKPAGA--TSADKVAPESEPIDSFARPSGNVVMKRKDXXXXXWGGRTGGGXXWGGKAGKAVSGRGSAKGKVLKAGTYGEAAGRTFAVLEVGLGDIVSLAKAVKKLNAEDVLGG-DSTALASAVKTLVEMESTLPSERDPKGTFTPLNLANELKVQEIGFRESSAELLNVLESRAASQCHTCPKLSEQYHLQQKRDKLERRIELLGHALSSEALSLFPDFQQRLGVLRSLGYVE-GNTVQLKGRVACEINTCDELIATEMVFENVLESLDPPEIAGILSALIFQEKTQNEPPLTDRLQTAVAQARTRAVGIRVIHL 1963
            L+ + L+++ E+SEIHLFC  ++ RLQ  D  LPQVL ++EML RG+GVHHGGLLPILK   E+VEI F+RGLVKVLF+TETFAMGVNMPARTVVFNGTRKHDGK FRDLLPGEYTQMAGRAGRRGLD VGTVII CW E     +L+ ML G  TKLESQFRL +NMILNLLRVEDM+VEDM+KRSFSEFRTQ+ L +K++P+ ++K   AL             +L AT    +  EQ  +E + LL   ++++   +L  A+ +S+   + L   R ++I+   L +  A++L+ +                                       G ++  + VL LCH GFV PA    ++ D   P++ PI +                                                L  GT G+  G+ + VLEV    I  L K     N   +L   D+  L+ AV+ L+++ + +P   DP+         ++LK+ E+   +  +++        ++ C   P L        K D+L   I ++  ALS+ +LSLFPDFQQRL VL  LGY+   NTVQ+KGRVACE+NTC+ELI TE++FENVL  L+P EI  +LSALIFQEKTQN P LT RL  A    +  A  + +I L
Sbjct:  217 LAGMDLSSSSERSEIHLFCQASISRLQGLDQHLPQVLQVREMLLRGIGVHHGGLLPILK---EMVEILFARGLVKVLFSTETFAMGVNMPARTVVFNGTRKHDGKAFRDLLPGEYTQMAGRAGRRGLDTVGTVIIACWGEVADATSLRTMLMGQPTKLESQFRLTYNMILNLLRVEDMTVEDMIKRSFSEFRTQKALASKNIPETIQKAKKALYYIMNFILHALEADLNATHGIHLDLEQ--VERFFLLQ-QSTKQKEQVLVQAIVNSRFVSNALSIGRVIVISTSGLTDQLAIILQAN--------------------------------------LGTSKT-VTVLTLCHAGFVPPAVKKDSAMDFFKPKNAPISTG-----------------------------------------------LAVGTKGQLLGKHYVVLEVPCTCIDKLTKNKANTNVRGLLASMDAAVLSRAVELLIDLGNEVPLFLDPR---------SDLKMMELETADLYSQVQYQYTLMQSNVCFNSPFLVPVLVQYSKIDRLRHYIAMMTAALSNHSLSLFPDFQQRLRVLTRLGYIATDNTVQVKGRVACEVNTCEELILTEIIFENVLAELEPEEIVAVLSALIFQEKTQNAPTLTPRLVHAQNTVKAIATSLGLIQL 785          
BLAST of mRNA_Ecto-sp13_S_contig1329.2635.1 vs. uniprot
Match: A0A067CLG9_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CLG9_SAPPC)

HSP 1 Score: 436 bits (1120), Expect = 7.380e-134
Identity = 287/676 (42.46%), Postives = 375/676 (55.47%), Query Frame = 2
Query:    2 LSSVTLTTAKEKSEIHLFCATAVKRLQDQDAQLPQVLNLKEMLSRGVGVHHGGLLPILKASSEIVEICFSRGLVKVLFATETFAMGVNMPARTVVFNGTRKHDGKDFRDLLPGEYTQMAGRAGRRGLDKVGTVIITCWSEPPPLVNLKMMLTGAATKLESQFRLKWNMILNLLRVEDMSVEDMMKRSFSEFRTQRELGAKDLPKVMKKCTDALNNLKATAEPCIRS--EQSTIEEYQLLSAMASERSSDLLDYAMRSSKNARSVLGSKRGLIITHKKLVNAPAVVLRGHDEPGGRGSTAAAQSAGGAQDFLRAARAHAQGSLPGAVPTGEAEMKMLVLVLCHEGFVKPAGATSADKVAPESEPIDSFARPSGNVVMKRKDXXXXXWGGRTGGGXXWGGKAGKAVSGRGSAKGKVLKAGTYGEAAGRTFAVLEVGLGDIVSLAKA----VKKLNAEDVL-GGDSTALASAVKTLVEMESTLPSERDPKGTFTPLNLANELKVQEIGFRESSAELLNVLESRAASQCHTCPKLSEQYHLQQKRDKLERRIELLGHALSSEALSLFPDFQQRLGVLRSLGYVEG-NTVQLKGRVACEINTCDELIATEMVFENVLESLDPPEIAGILSALIFQEKTQNEPPLTDRLQTAVAQARTRAVGIRVIHLHRGLKSEITSLKRT 2005
            LS + L+++ E+SEIHLFC  ++ RLQ  D  LPQVL ++EML RG+GVHHGGLLPILK   E+VEI F+RGLVKVLF+TETFAMGVNMPARTVVFNGTRKHDGK FRDLLPGEYTQMAGRAGRRGLD VGTVII CW + P   +L+ ML G  TKLESQFRL +NMILNLLRVEDM+VEDM+KRSFSEFRTQ+ L AKD+P  ++K   AL+ L+A          + + +E + LL      +   L+ +A+ +S+ A + L   R ++++   L +  A++L+                                           A   + VL LCH  F  P  A                A+PS     K K       G                           L  G  G   G+ + VL+V    +  L K     +   N   +L   D + L+ AV+ LV++E++LP    P+         N+LK+ E+   +  +++ +      AS C   P L        K D+L   +  +  ALS+ +LSLFPDFQQRL VL  LGY+   NTVQ+KGRVACE+NTC+EL+ TE++FENVL  L+P EI  +LSALIFQEKTQN+P LT RL  A +     A  + VI L   L+ + T   +T
Sbjct:  631 LSGMDLSSSSERSEIHLFCNASISRLQGLDQHLPQVLQVREMLLRGIGVHHGGLLPILK---EMVEILFARGLVKVLFSTETFAMGVNMPARTVVFNGTRKHDGKAFRDLLPGEYTQMAGRAGRRGLDTVGTVIIACWGDAPDATSLRTMLMGTPTKLESQFRLTYNMILNLLRVEDMTVEDMIKRSFSEFRTQKALAAKDIPSAIQKAKKALHALEADLNTTHGGHLDLTEVERFFLLQQSTKYKEQALV-HAILNSRYAAAALCVGRVVVLSTTGLPDQLAILLQ---------------------------------------VDKAATRTVTVLALCHASFSPPVVA----------------AKPSAMDFFKPKAQASTSTG---------------------------LAPGAKGSLLGKHYVVLDVPETCLNKLTKVSGYRIASPNVRSLLEANDPSVLSRAVELLVDLETSLPLFLSPQ---------NDLKMMELESADLYSQVQHQYSVMEASPCFASPFLMPVLAQYAKIDRLRHYMATMTAALSNHSLSLFPDFQQRLRVLTRLGYIASDNTVQVKGRVACEVNTCEELVLTEIIFENVLADLEPEEIVAVLSALIFQEKTQNQPTLTPRLLHAQSTVHAIATSLGVIQLECHLEIDPTEFAKT 1211          
BLAST of mRNA_Ecto-sp13_S_contig1329.2635.1 vs. uniprot
Match: A0A1V9ZLM2_9STRA (DEAD/DEAH box RNA helicase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZLM2_9STRA)

HSP 1 Score: 430 bits (1106), Expect = 1.290e-131
Identity = 293/660 (44.39%), Postives = 379/660 (57.42%), Query Frame = 2
Query:    2 LSSVTLTTAKEKSEIHLFCATAVKRLQDQDAQLPQVLNLKEMLSRGVGVHHGGLLPILKASSEIVEICFSRGLVKVLFATETFAMGVNMPARTVVFNGTRKHDGKDFRDLLPGEYTQMAGRAGRRGLDKVGTVIITCWSEPPPLVNLKMMLTGAATKLESQFRLKWNMILNLLRVEDMSVEDMMKRSFSEFRTQRELGAKDLPKVMKKCTDALNNLKA--TAEPCIRSEQSTIEEYQLL--SAMASERSSDLLDYAMRSSKNARSVLGSKRGLIITHKKLVNAPAVVLRGHDEPGGRGSTAAAQSAGGAQDFLRAARAHAQGSLPGAVPTGEAEMKMLVLVLCHEGFVKPAGATSADKVAPESEPIDSFARPSGNVVMKRKDXXXXXWGGRTGGGXXWGGKAGKAVSGRGSAKGKVLKAGTYGEAAGRTFAVLEVGLGDIVSLAKAVKKLNAEDVLGG-DSTALASAVKTLVEMESTLPSERDPKGTFTPLNLANELKVQEIGFRESSAELLNVLESRAASQCHTCPKLSEQYHLQQKRDKLERRIELLGHALSSEALSLFPDFQQRLGVLRSLGYVE-GNTVQLKGRVACEINTCDELIATEMVFENVLESLDPPEIAGILSALIFQEKTQNEPPLTDRLQTAVAQARTRAVGIRVIHL 1963
            L+ + L+++ E+SEIHLFC  ++ RLQ  D  LPQVL ++EML RG+GVHHGGLLPILK   E+VEI F+RGLVKVLF+TETFAMGVNMPARTVVFNGTRKHDGK FRDLLPGEYTQMAGRAGRRGLD VGTVII CW E P   +L+ ML G  TKLESQFRL +NMILNLLRVEDM+VEDM+KRSFSEFRTQ+ L A+++P+ ++K    L+ L+A   A      +   +E + LL  S  A ER+   L +A+ +S+ A + L   R +++T   LV+  A+VL+  D+   R +T                                      VL LC   FV P       K AP +     F +P                               KA +  G      L AG  G   G+ +AVL+V    I  L K     +   ++   D+  L+ AV+ LV++E+ LP   DP+          +LK+ E+   +  +++ +     AAS C   P L        K D+L   +  +  ALS+ +LSLFPDFQQRL VL  LGY+   NTVQ+KGRVACE+NTC+EL+ TE++FENVL  L+P EI  +LSALIFQEKTQN P LT RL  A    +  A  + +I L
Sbjct:  667 LAGMDLSSSSERSEIHLFCQASISRLQGLDQHLPQVLQVREMLLRGIGVHHGGLLPILK---EMVEILFARGLVKVLFSTETFAMGVNMPARTVVFNGTRKHDGKAFRDLLPGEYTQMAGRAGRRGLDTVGTVIIACWGEVPDGTSLRTMLMGQPTKLESQFRLTYNMILNLLRVEDMTVEDMIKRSFSEFRTQKALAARNIPQAIQKAKKLLHALEADVAATHGGHLDLVEVERFFLLQQSTKAKERA---LVHAVLNSRYAPAALCVGRVVVVTTAGLVDQLAIVLQ-VDKTAARTAT--------------------------------------VLALCPATFVPPV-----TKKAPSAM---DFFKP-------------------------------KAAATTG------LAAGATGALLGKHYAVLDVPESCIDKLTKHKAAASVRQLVDATDAGVLSRAVELLVDLEAQLPLFLDPR---------TDLKMLELESADLYSQVSHQYTLMAASPCFASPFLMPVLAQYAKIDRLRLYMATMTAALSNHSLSLFPDFQQRLRVLTRLGYIATDNTVQVKGRVACEVNTCEELVLTEIIFENVLAELEPEEIVAVLSALIFQEKTQNAPTLTPRLLHAQTTVQAIATSLGLIQL 1227          
BLAST of mRNA_Ecto-sp13_S_contig1329.2635.1 vs. uniprot
Match: K8YWY6_NANGC (Antiviral helicase SKI2 (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YWY6_NANGC)

HSP 1 Score: 409 bits (1051), Expect = 3.270e-129
Identity = 275/667 (41.23%), Postives = 362/667 (54.27%), Query Frame = 2
Query:   44 IHLFCATAVKRLQDQDAQLPQVLNLKEMLSRGVGVHHGGLLPILKASSEIVEICFSRGLVKVLFATETFAMGVNMPARTVVFNGTRKHDGKDFRDLLPGEYTQMAGRAGRRGLDKVGTVIITCWSEPPPLVNLKMMLTGAATKLESQFRLKWNM---------------------ILNLLRVEDMSVEDMMKRSFSEFRTQRELGAKDLPKVMKKCTDALNNL-KATAEPCIRSEQSTIEEYQLLSAMASERSSDLLDYAMRSSKN-ARSVLGSKRGLIIT-HKKLVNAPAVVLRGHDEPGGRGSTAAAQSAGGAQDFLRAARAHAQGSLPGAVPTGEAEMKMLVLVLCHEGFVKPAGATSADKVAPESEPIDSFARPSGNVVMKRKDXXXXXWGGRTGGGXXWGGKAGKAVSGRGSAKGKVLKAGTYGEAAGRTFAVLEVGLGDIVSLAKAVKK--LNAEDVLG-GDS---------------------TALASAVKTLVEME-------STLPSERDPKGTFTPLNLANELKVQEIGFRESSAELLNVLESRAASQCHTCPKLSEQYHLQQKRDKLERRIELLGHALSSEALSLFPDFQQRLGVLRSLGYVEGNT--VQLKGRVACEINTCDELIATEMVFENVLESLDPPEIAGILSALIFQEK 1873
            +H+F ++A+KRLQ +D  LPQV+ + ++  RG+GVHHGGLLP+LK   EIVEI FSRGL+K+LFATETFAMGVNMPARTVVFN  RKHDG+DFRDL PGEYTQMAGRAGRRGLDKVGTVIITCW E PPL  L  MLTG AT L SQFRL +NM                     ILNLLR EDMS+EDM+KRSFSEF TQR LGA++LP  ++K    L  + K    PC+R +   IE+Y   S   + +++ ++  A+  +K  ++S+LG  R L +T    LVN   +V+RG +      S +                    G  P +   G+   +         G+ +  G    D                                         GG+ G  ++   + +        YG A  R FA+  + L D++ +    +K   ++E +L  GD+                     + +A  VK LV  E       S  PS         PLN   ELK+ ++ F E+ + L    E+  AS+CHTCP L  QY    +R ++E ++E + H LS+E+LSLFP+FQ RL VL +LGY++  T  VQLKGRVACE+NTCDEL+ TE VFENVL  L P EIAG+LS L+ QEK
Sbjct:    1 VHIFTSSAIKRLQAKDQDLPQVIRVLDLCKRGIGVHHGGLLPLLK---EIVEILFSRGLIKILFATETFAMGVNMPARTVVFNALRKHDGRDFRDLYPGEYTQMAGRAGRRGLDKVGTVIITCWKEVPPLPTLSRMLTGRATLLSSQFRLTYNMVREGGMKEGKRERNLGGRAGFILNLLRTEDMSMEDMIKRSFSEFATQRALGARNLPLQLQKAEKILGKIRKEGLAPCLRGDPPAIEDYYAQSRRTARQTTTVVAQALNLAKTGSKSMLGEGRFLKVTLPPALVNVWGLVVRGLEGXXXXDSVS--------------------GGFPPSHVGGQGGSR---------GWEEERGENRDD-----------------------------------------GGQKGPGMTDEENRE-------VYGTAGSRHFALRTLSLEDVILVTGRRRKDRFDSEKILAFGDALQRPTHQLATTSLPTFSVSTPSVIADLVKDLVACEEAEAHTQSLSPSSPPAVLPLAPLNFPKELKINDLSFIEAYSRLQPEQEALFASKCHTCPILPAQYAHVHRRRRVEAKVESMRHLLSNESLSLFPEFQDRLRVLSALGYIDPTTQAVQLKGRVACEVNTCDELLLTETVFENVLAPLTPAEIAGLLSVLVCQEK 587          
BLAST of mRNA_Ecto-sp13_S_contig1329.2635.1 vs. uniprot
Match: D0N907_PHYIT (DEAD/DEAH box RNA helicase, putative n=14 Tax=Phytophthora TaxID=4783 RepID=D0N907_PHYIT)

HSP 1 Score: 420 bits (1080), Expect = 1.540e-127
Identity = 286/690 (41.45%), Postives = 399/690 (57.83%), Query Frame = 2
Query:    2 LSSVTLTTAKEKSEIHLFCATAVKRLQDQDAQLPQVLNLKEMLSRGVGVHHGGLLPILKASSEIVEICFSRGLVKVLFATETFAMGVNMPARTVVFNGTRKHDGKDFRDLLPGEYTQMAGRAGRRGLDKVGTVIITCWSEPPPLVNLKMMLTGAATKLESQFRLKWNMILNLLRVEDMSVEDMMKRSFSEFRTQRELGAKDLPKVMKKCTDALNNLKATAEPCIRSEQSTIEEYQLLSA-------------------MASERSSDLLDYAMRSSKNA----RSVLGSKRGLIITHKKLVNAPAVVLRGHDEPGGRGSTAAAQSAGGAQDFLRAARAHAQGSLPGAVPTGEAEMKM----LVLVLCHEGFVKPAGATSADKVAPESEPIDSFARPSGNVVMKRKDXXXXXWGGRTGGGXXWGGKAGKAVSGRGSAKGKVLKAGTYGEAAGRTFAVLEVGLGDIVSLAKAV-KKLNAEDVLGGDSTA-LASAVKTLVEMESTLPSERDPKGTFTPLNLANELKVQEIGFRESSAELLNVLESRAASQCHT-CPKLSEQYHLQQKRDKLERRIELLGHALSSEALSLFPDFQQRLGVLRSLGYV-EGNTVQLKGRVACEINTCDELIATEMVFENVLESLDPPEIAGILSALIFQEKTQNEPPLTDRLQTAVAQARTRAVGIRVIHLHRGLK 1978
            L+ + L+T  E+SEIHLF  T+V+RLQ  D +LPQVL +KEML RG+GVHHGGLLPI+K   E+VEI F RGLVKVLF+TETFAMGVNMPARTVVFNG RKHDGK+FRDL+PGEYTQMAGRAGRRGLD VGTVII CW++ P   +L+ ML G AT L SQFRL +NM+LNLLRVE ++VEDMMKRSFSEF TQ+ L +K+LP+++ K    L  L          E+S +E+Y  L A                   +  + +  LL   ++++KNA    R VL + +GL   H       A+V+R         +TAA    G A+  L       +  LP +     A+ ++    +V+ LC + +  P       ++  E++  +  A   G ++  +KD     +G           + GK  +   S +   L A + G   GR +AVLEV    + S+   V   +N + ++   S   LAS+++ L +++    + +  K     ++L  ELKV ++       +   +     +  C T  P +S       K  KL+  +  +   LS+++LSLFPDFQQRL VL+ LGY+ +   VQ+KGRVACEINTC+EL+ TEM+FENVL +L+P EI  +LSALIFQEK+Q+EP LT  L+T     +  A  + +I L + L+
Sbjct:  645 LAKLDLSTPSERSEIHLFLETSVQRLQGSDRELPQVLTMKEMLKRGIGVHHGGLLPIIK---EMVEILFGRGLVKVLFSTETFAMGVNMPARTVVFNGIRKHDGKNFRDLVPGEYTQMAGRAGRRGLDSVGTVIIACWNDVPEATSLRTMLAGKATSLSSQFRLTYNMMLNLLRVEVLTVEDMMKRSFSEFHTQKALASKNLPQLIHKGKTLLQQL----------ERSLVEDYPHLEASGELAQMQAFYQLKRDKRELEKKLTKWLLANNLQAAKNAIAPGRVVLVNVKGLSSDHL------ALVVR---------TTAAVVGEGTARSKLAF-----ETELPSSGTRDAAQRRVFKSIMVVTLCSDDYEPPKV-----EIPSETKKKNLHALTGGRMLRSKKDDDDRMFG-----------RMGKKDTAD-SQESAELTAPSTGTLLGRKYAVLEVPESCVESVTSLVASSINTKTLVASSSKKELASSIEFLTQLDKDAAATQ--KAAIPYVDLMRELKVNDLEVATGYTQWQQLYSLVVSHPCATDSPSVSRVMKKVDKMFKLQAYLVRMTRQLSNDSLSLFPDFQQRLSVLKRLGYISDDGVVQVKGRVACEINTCEELVLTEMIFENVLATLEPEEIVAVLSALIFQEKSQSEPTLTPTLETTREVVKNIAESLGLIQLEQRLE 1282          
BLAST of mRNA_Ecto-sp13_S_contig1329.2635.1 vs. uniprot
Match: A0A225WSS8_9STRA (DEAD/DEAH box RNA helicase n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WSS8_9STRA)

HSP 1 Score: 420 bits (1080), Expect = 3.160e-127
Identity = 285/674 (42.28%), Postives = 395/674 (58.61%), Query Frame = 2
Query:    2 LSSVTLTTAKEKSEIHLFCATAVKRLQDQDAQLPQVLNLKEMLSRGVGVHHGGLLPILKASSEIVEICFSRGLVKVLFATETFAMGVNMPARTVVFNGTRKHDGKDFRDLLPGEYTQMAGRAGRRGLDKVGTVIITCWSEPPPLVNLKMMLTGAATKLESQFRLKWNMILNLLRVEDMSVEDMMKRSFSEFRTQRELGAKDLPKVMKKCTDALNNLKATAE---PCIRS--EQSTIEEYQLLSAMASERSSDLLDYAMRSS-KNARSVLGSKRGLIITHKKLVNAP-AVVLRGHDEPGGRGSTAAAQSAGGAQDFLRAARAHAQGSLPGAVPTGEAEMKMLVLVLCHEGFVKPAGATSADKVAPESEPIDSFARP----SGNVVMKRKDXXXXXWGGRTGGGXXWGGKAGKAVSGRGSAKGKVLKAGTYGEAAGRTFAVLEVGLGDIVSLAKAVKK-LNAEDVLGGDSTA-LASAVKTLVEMESTLPSERDPKGTFTPLNLANELKVQEIGFRESSAELLNVLESRAASQCHT-CPKLSEQYHLQQKRDKLERRIELLGHALSSEALSLFPDFQQRLGVLRSLGYV-EGNTVQLKGRVACEINTCDELIATEMVFENVLESLDPPEIAGILSALIFQEKTQNEPPLTDRLQTAVAQARTRAVGIRVIHLHRGLK 1978
            L+ + L+T  E+SEIHLF  T+V+RLQ  D +LPQVL +KEML RG+GVHHGGLLPI+K   E+VEI F RGLVKVLF+TETFAMGVNMPARTVVFNG RKHDGK+FRDLLPGEYTQMAGRAGRRGLD VGTVII CW++ P   +L+ ML G AT L SQFRL +NMILNLLRVE ++VEDMMKRSFSEF TQ+ L +K++PK+++K    L  LK +     P + +  E + ++E+  L     E    L  + + ++ + A++ +   R +I+  K L +   A+V+R +    G G TA ++ +              Q S  G          ++V+ LC + +  P              P DS   P    SG ++  +KD       GR G       K GK  S     +   L A +     G+ +AVLEV    + S+   V   +N + ++   S   LAS+++ L ++E    + +  K     +++  ELKV ++       +   +     +  C T  P +S      +K  KL+  +  +   LS+++LSLFPDFQQRL VL+ LGY+ E   VQ+KGRVACEINTC+EL+ TEM+FENVL +L+P EI  +LSALIFQEK+Q+EP LT  L+ +    +  A  + +I L + L+
Sbjct:  693 LAKLDLSTPSERSEIHLFLETSVQRLQGSDRELPQVLTMKEMLKRGIGVHHGGLLPIIK---EMVEILFGRGLVKVLFSTETFAMGVNMPARTVVFNGIRKHDGKNFRDLLPGEYTQMAGRAGRRGLDSVGTVIIACWNDVPEPTSLRTMLAGKATSLSSQFRLTYNMILNLLRVEVLTVEDMMKRSFSEFHTQKALASKNIPKLIQKGKTLLQQLKRSLVEDYPHLEANGELAQMQEFYQLKRDKRELEKKLTKWLLTNNIQAAKTAIAPGRIVILNVKGLPSDQLALVVRTNAAMIGEGGTARSKLS---------FETELQNSTIGDTSHKGVFKSIMVISLCPDDYEPPKAKV----------PKDSKKSPHTLGSGRMLRSKKDDDDDRMFGRMG-------KKGKVES----QESGELSAPSTATLLGKKYAVLEVPESCVESVTCMVASAVNIKTLVASSSKKELASSIEFLTKLEKDAATTQ--KAAIAYVDVMGELKVNDLEVATGYTQWQQMYSMVLSHPCATDSPSVSRVMGKVEKIFKLKAYLMRMTQELSNDSLSLFPDFQQRLSVLKRLGYISEDGVVQVKGRVACEINTCEELVLTEMIFENVLANLEPEEIVAVLSALIFQEKSQSEPTLTPTLENSREVVKNIAESLGLIQLEQHLE 1331          
BLAST of mRNA_Ecto-sp13_S_contig1329.2635.1 vs. uniprot
Match: A0A3R7NEF4_9STRA (Uncharacterized protein n=5 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7NEF4_9STRA)

HSP 1 Score: 410 bits (1055), Expect = 6.180e-124
Identity = 283/677 (41.80%), Postives = 394/677 (58.20%), Query Frame = 2
Query:    2 LSSVTLTTAKEKSEIHLFCATAVKRLQDQDAQLPQVLNLKEMLSRGVGVHHGGLLPILKASSEIVEICFSRGLVKVLFATETFAMGVNMPARTVVFNGTRKHDGKDFRDLLPGEYTQMAGRAGRRGLDKVGTVIITCWSEPPPLVNLKMMLTGAATKLESQFRLKWNMILNLLRVEDMSVEDMMKRSFSEFRTQRELGAKDLPKVMKKCTDALNNLKATAE---PCIRS--EQSTIEEYQLLSAMASERSSDLLDYAMRSS-KNARSVLGSKRGLIITHKKLVNAP-AVVLRGHDEPGGRGSTAAAQSAGGAQDFLRAARAHAQGSLPGAVPTGEAEM----KMLVLVLCHEGFVKPAGATSADKVAPESEPIDSFARPSGNVVMKRKDXXXXXWGGRTGGGXXWGGKAGKAVSGRGSAKGKVLKAGTYGEAAGRTFAVLEVGLGDIVSLAKAVKK-LNAEDVLGGDSTA-LASAVKTLVEMESTLPSERDPKGTFTPLNLANELKVQEIGFRESSAELLNVLESRAASQCHTC----PKLSEQYHLQQKRDKLERRIELLGHALSSEALSLFPDFQQRLGVLRSLGYV-EGNTVQLKGRVACEINTCDELIATEMVFENVLESLDPPEIAGILSALIFQEKTQNEPPLTDRLQTAVAQARTRAVGIRVIHLHRGLK 1978
            LS + L+T  E+SEIHLF  T+V+RLQ  D +LPQVL +KEML RG+GVHHGGLLPI+K   E+VEI F RGLVKVLF+TETFAMGVNMPARTVVFNG RKHDGK+FRDLLPGEYTQMAGRAGRRGLD VGTVII CW++ P   +L+ ML G AT L SQFRL +NMILNLLRVE ++VEDMMKRSFSEF TQ+ L AK++PK+++K    L  L+ +     P + +  E + ++E+  L     E    L  + + ++ + A++ +   R +I+  K L +   A+V+R      G G T+ ++ +              +  L  +  T          ++V+ LC + +  P    S                                  GR G       K GK+ S + SA+   L A       G+ +AVLEV    + S+   V   +N + ++   S   LAS+++ LV++E    S    K +   ++L  ELKV ++      A+   +    +   CH C    P +S      +K  KL+  +  +   LS+++LSLFPDFQQRL VL+ LGY+ +   VQ+KGRVACEINTC+EL+ TEM+FENVL +L+P EI  +LSALIFQEK+Q+EP LT +L+++    ++ A  + +I L + L+
Sbjct:  647 LSKLDLSTPSERSEIHLFLETSVQRLQGSDRELPQVLTMKEMLKRGIGVHHGGLLPIIK---EMVEILFGRGLVKVLFSTETFAMGVNMPARTVVFNGIRKHDGKNFRDLLPGEYTQMAGRAGRRGLDSVGTVIIACWNDVPEPTSLRTMLAGKATSLSSQFRLTYNMILNLLRVEVLTVEDMMKRSFSEFHTQKALAAKNIPKLIQKGKTLLQQLERSLVEDYPHLETSGELAQMQEFYQLKREKRELEKKLTKWLLANNIQAAKNAIAPGRIVILNVKGLPSDQLALVVRTSSAMVGEGGTSRSKLS-------------FESELQNSTVTDRGHKGVFKSIMVVTLCPDEYEPPKVEASXXXXXXXXXXXXXXXXXXXXXXXXXXXRMF----GRMG-------KKGKSES-QESAE---LTAPATATLLGKKYAVLEVPESCVESVTSVVASGVNTKTLVASSSKKELASSIEFLVQIEKE--SATTQKASIAFVDLMGELKVNDLEVATGYAQWQQLY---SMVLCHPCITDSPSVSRVMSKVEKIFKLKAYLVRMTRELSNDSLSLFPDFQQRLSVLKRLGYISDDGVVQVKGRVACEINTCEELVLTEMIFENVLANLEPEEIVAVLSALIFQEKSQSEPTLTPQLESSREVVKSIAESLGLIQLEQHLE 1287          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1329.2635.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FJL2_ECTSI0.000e+096.10DEAD box helicase n=1 Tax=Ectocarpus siliculosus T... [more]
A0A6H5KP96_9PHAE7.000e-29792.53Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A4D9CSQ0_9STRA2.940e-14644.86Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
A0A1V9ZZV5_9STRA6.330e-13542.24DEAD/DEAH box RNA helicase (Fragment) n=1 Tax=Thra... [more]
A0A067CLG9_SAPPC7.380e-13442.46Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
A0A1V9ZLM2_9STRA1.290e-13144.39DEAD/DEAH box RNA helicase n=1 Tax=Achlya hypogyna... [more]
K8YWY6_NANGC3.270e-12941.23Antiviral helicase SKI2 (Fragment) n=1 Tax=Nannoch... [more]
D0N907_PHYIT1.540e-12741.45DEAD/DEAH box RNA helicase, putative n=14 Tax=Phyt... [more]
A0A225WSS8_9STRA3.160e-12742.28DEAD/DEAH box RNA helicase n=1 Tax=Phytophthora me... [more]
A0A3R7NEF4_9STRA6.180e-12441.80Uncharacterized protein n=5 Tax=Phytophthora kerno... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1329contigEcto-sp13_S_contig1329:2..12389 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score1092.4
Seed ortholog evalue0.0
Seed eggNOG ortholog2880.D7FJL2
Preferred nameSKIV2L
Model size2143
KEGG koko:K12599
KEGG Pathwayko03018,map03018
KEGG ModuleM00392
Hectar predicted targeting categoryother localisation
GOsGO:0000184,GO:0000288,GO:0000291,GO:0000956,GO:0003674,GO:0003676,GO:0003723,GO:0003724,GO:0003729,GO:0003824,GO:0004004,GO:0004386,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0005737,GO:0005773,GO:0005829,GO:0006139,GO:0006401,GO:0006402,GO:0006725,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0006813,GO:0006950,GO:0006986,GO:0007154,GO:0007165,GO:0008026,GO:0008150,GO:0008152,GO:0008186,GO:0009056,GO:0009057,GO:0009892,GO:0009987,GO:0010033,GO:0010035,GO:0010038,GO:0010468,GO:0010605,GO:0010608,GO:0010629,GO:0015672,GO:0016070,GO:0016071,GO:0016441,GO:0016458,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019222,GO:0019439,GO:0023052,GO:0030001,GO:0030968,GO:0031974,GO:0031981,GO:0032991,GO:0033554,GO:0034427,GO:0034620,GO:0034641,GO:0034655,GO:0034976,GO:0035864,GO:0035966,GO:0035967,GO:0040029,GO:0042221,GO:0042623,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043928,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0046483,GO:0046700,GO:0048519,GO:0050789,GO:0050794,GO:0050896,GO:0051179,GO:0051234,GO:0051716,GO:0055087,GO:0060255,GO:0065007,GO:0070013,GO:0070035,GO:0070478,GO:0070481,GO:0070887,GO:0071310,GO:0071704,GO:0090304,GO:0097159,GO:0140098,GO:1901360,GO:1901361,GO:1901363,GO:1901575
Exons18
EggNOG free text desc.nuclear-transcribed mRNA catabolic process, 3'-5' exonucleolytic nonsense-mediated decay
EggNOG OGsCOG4581@1,KOG0947@2759
Ec32 ortholog descriptionDEAD box helicase
Ec32 orthologEc-04_006520.1
Cds size1884
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko03019
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1329.2635.1prot_Ecto-sp13_S_contig1329.2635.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig1329 1053..12254 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462709.9494553-UTR-Ecto-sp13_S_contig1329:1..311681462709.9494553-UTR-Ecto-sp13_S_contig1329:1..31Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig1329 2..31 +
1681462709.9629695-UTR-Ecto-sp13_S_contig1329:609..6851681462709.9629695-UTR-Ecto-sp13_S_contig1329:609..685Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig1329 610..685 +
1681462709.9716766-UTR-Ecto-sp13_S_contig1329:1034..10521681462709.9716766-UTR-Ecto-sp13_S_contig1329:1034..1052Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig1329 1035..1052 +
1681462710.1381733-UTR-Ecto-sp13_S_contig1329:12254..123891681462710.1381733-UTR-Ecto-sp13_S_contig1329:12254..12389Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig1329 12255..12389 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462709.9800906-CDS-Ecto-sp13_S_contig1329:1052..11151681462709.9800906-CDS-Ecto-sp13_S_contig1329:1052..1115Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1329 1053..1115 +
1681462709.9881687-CDS-Ecto-sp13_S_contig1329:1522..16591681462709.9881687-CDS-Ecto-sp13_S_contig1329:1522..1659Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1329 1523..1659 +
1681462709.9967375-CDS-Ecto-sp13_S_contig1329:2363..24841681462709.9967375-CDS-Ecto-sp13_S_contig1329:2363..2484Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1329 2364..2484 +
1681462710.006414-CDS-Ecto-sp13_S_contig1329:3074..31631681462710.006414-CDS-Ecto-sp13_S_contig1329:3074..3163Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1329 3075..3163 +
1681462710.0167146-CDS-Ecto-sp13_S_contig1329:3502..36261681462710.0167146-CDS-Ecto-sp13_S_contig1329:3502..3626Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1329 3503..3626 +
1681462710.0255122-CDS-Ecto-sp13_S_contig1329:4041..41451681462710.0255122-CDS-Ecto-sp13_S_contig1329:4041..4145Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1329 4042..4145 +
1681462710.0342193-CDS-Ecto-sp13_S_contig1329:4705..47991681462710.0342193-CDS-Ecto-sp13_S_contig1329:4705..4799Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1329 4706..4799 +
1681462710.0433068-CDS-Ecto-sp13_S_contig1329:5533..56291681462710.0433068-CDS-Ecto-sp13_S_contig1329:5533..5629Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1329 5534..5629 +
1681462710.0525477-CDS-Ecto-sp13_S_contig1329:6301..64121681462710.0525477-CDS-Ecto-sp13_S_contig1329:6301..6412Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1329 6302..6412 +
1681462710.0625093-CDS-Ecto-sp13_S_contig1329:7231..74591681462710.0625093-CDS-Ecto-sp13_S_contig1329:7231..7459Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1329 7232..7459 +
1681462710.07322-CDS-Ecto-sp13_S_contig1329:8177..82791681462710.07322-CDS-Ecto-sp13_S_contig1329:8177..8279Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1329 8178..8279 +
1681462710.0810459-CDS-Ecto-sp13_S_contig1329:8812..89051681462710.0810459-CDS-Ecto-sp13_S_contig1329:8812..8905Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1329 8813..8905 +
1681462710.0907211-CDS-Ecto-sp13_S_contig1329:9582..96951681462710.0907211-CDS-Ecto-sp13_S_contig1329:9582..9695Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1329 9583..9695 +
1681462710.1006372-CDS-Ecto-sp13_S_contig1329:10350..104551681462710.1006372-CDS-Ecto-sp13_S_contig1329:10350..10455Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1329 10351..10455 +
1681462710.1132777-CDS-Ecto-sp13_S_contig1329:11136..112731681462710.1132777-CDS-Ecto-sp13_S_contig1329:11136..11273Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1329 11137..11273 +
1681462710.1276042-CDS-Ecto-sp13_S_contig1329:12087..122541681462710.1276042-CDS-Ecto-sp13_S_contig1329:12087..12254Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1329 12088..12254 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig1329.2635.1

>prot_Ecto-sp13_S_contig1329.2635.1 ID=prot_Ecto-sp13_S_contig1329.2635.1|Name=mRNA_Ecto-sp13_S_contig1329.2635.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=628bp
MLSRGVGVHHGGLLPILKASSEIVEICFSRGLVKVLFATETFAMGVNMPA
RTVVFNGTRKHDGKDFRDLLPGEYTQMAGRAGRRGLDKVGTVIITCWSEP
PPLVNLKMMLTGAATKLESQFRLKWNMILNLLRVEDMSVEDMMKRSFSEF
RTQRELGAKDLPKVMKKCTDALNNLKATAEPCIRSEQSTIEEYQLLSAMA
SERSSDLLDYAMRSSKNARSVLGSKRGLIITHKKLVNAPAVVLRGHDEPG
GRGSTAAAQSAGGAQDFLRAARAHAQGSLPGAVPTGEAEMKMLVLVLCHE
GFVKPAGATSADKVAPESEPIDSFARPSGNVVMKRKDDDDGGWGGRTGGG
GGWGGKAGKAVSGRGSAKGKVLKAGTYGEAAGRTFAVLEVGLGDIVSLAK
AVKKLNAEDVLGGDSTALASAVKTLVEMESTLPSERDPKGTFTPLNLANE
LKVQEIGFRESSAELLNVLESRAASQCHTCPKLSEQYHLQQKRDKLERRI
ELLGHALSSEALSLFPDFQQRLGVLRSLGYVEGNTVQLKGRVACEINTCD
ELIATEMVFENVLESLDPPEIAGILSALIFQEKTQNEPPLTDRLQTAVAQ
ARTRAVGIRVIHLHRGLKSEITSLKRT*
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mRNA from alignment at Ecto-sp13_S_contig1329:2..12389+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig1329.2635.1 ID=mRNA_Ecto-sp13_S_contig1329.2635.1|Name=mRNA_Ecto-sp13_S_contig1329.2635.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=12388bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1329:2..12389+ (Ectocarpus species13 EcNAP12_S_4_19m)
GCTCAGCAGCGTCACGCTCACCACCGCCAAGTCAGTTTCACGCCAACAGC AGTACCGTATATGACACAAGATAACACACCCCCTGGGCCAACGTTCAAAG CTCGATTACGCCATGACGAAGAGGATGAATAAATGAAACAATACGTTTTC GGAAAGCTCTCGACGAGACAGCTTCGACGCCACCGTTTTCAGCGCTGTGA CTCTTTCTGCTGTTGAGAAATTGAGAGTTGAAAATCGGTTCAGGGGGGGG GTGTTATCTTGTGTCATTTGCGGCAAGTCCTGTTGTGCGTATCACGTATC ACGTATCACGTATCAATAATGGTGATTCACTGTTTGTAGCGTTATGCTCA CGCAACTTTTGTCTTCACAAGTGACAGTTAGGGATCCAACCAGATTGTGT TGATGTACCTTTTACGGACGGGATGAACGGAGCGATCCGTTGGCAAAGCA CGCGCGCCGTCACAATCCAGCCATCCAGTTCCAACTGCTGTGCTCTCGCT GGAGCTCTGTCAGCTGGCTGGCAAGGGACGGTCGTCTAAAACTTCCATCT TGGCCGGCCTTTTTCCGCTCCTCCTGTGCGCTTTGTCGTTGTTTTTGTGT CTGAAAAGGGAGAAGAGTGAGATACACCTTTTTTGTGCGACGGCAGTGAA ACGCTTGCAAGATCAAGACGCACAGCTACCTCAGGTGTGGTGTGGAGAAG TGGCGGGACTTGCGTGCCTCCGCACGCACACGCGACACTTTCTGTTGTTG TTTTTTGCAGTTTTTACTCGCACACACCTGCTTACTGCTGTTGTGGACGC TTGAAGGCACCCTGATGCTGCATGCAGTGTATCGTCACTATGTGATGGTT TTAGCGAACTATCGCTATCACCATCACTTGGTGTGCGATGGTTGACCTGT AGATCCGAAAGGATTAAAATTTAAATTACTCTGGTGCACCCGTCAATACG TGTGAGCGAGGGGGTGATGCTGTGGTTCTAGAATGCTGCGCCTGGAGGAG AATCATTCACCGTGATGGCCATGATGTTTGCAGGTGCTCAATCTCAAGGA AATGCTGTCTCGAGGCGTCGGCGTGCACCACGGTGGGCTGCTCCCCATCC TCAAGGCAAGTTCTGTCTGTAAATCATGCTGTTGATGCGTCTATAGCCTA CACCCGAGGCAGTTTCAAGTCTTGGGATCCAGCCGCGAAATCTTTTTTGC GGTTTCAACGTTATTTCACGGATAGCAAATGCTTCTCGGTGGGCATCCTC TCTGTTCGGTGTTTTGCTGGCGGTGCAGCACGCTGGGCACAGTGCACAGG GTGCATGTTGTCTGAAGCGTTGGCGTTGCATTGTAAACGTGAGTCTGGCG TGTGTTGAGTATGTTGCGCCAGCGTTTTGGATGTGATCAACGCCATTTCG TTGTTGTCGATGATGTCGTCTTTCTGCTTTGAGGGGGTATTTCATCACAT CATACCTTCACATCCCCCCTCACACCTCCCACACACACCACACACCACAC CCCTTGCAAAAACAACAACAGGAGATTGTGGAGATTTGCTTCAGCCGGGG ATTGGTGAAGGTCTTGTTCGCTACCGAGACGTTTGCCATGGGAGTCAACA TGCCCGCCAGAACCGTCGTGTTCAACGGAACCAGAAAGCACGACGGAAAA GATTTCAGGTACAATCTCATCTTCATCACGATGATGGATGGATGTCCCTG CTCTACTGAAGCAGAGGGCGGCTTCGCGATGAACGGATGTCCGTGCTTTA CGGAAGCTGCTTTGCTGAAGCTGCTTTGCTGAAGCAGAAGGCGGCTTGCC GCCGAACGCAAAAACAGCTTCTCCGATGAGGCTGACCGAGCGGCTCCATT GGCCGATTTTCAGGGCGGGGCTTTGTTCTCTTTGCGTTCGTCACGTTACA GAGCGGAGTTGCTTCCCCGCATGATACGTCTCACAGCTCATGAACGCAGA GATGTGGAGACATTCGAGATGGTATTGGCCTTTCTACTTGAGACGGAGCG ATAGTTGTGATCGGGGACGTGGTTTAGTCGATATTGCCAGCGAGCAGAGC GTGGGACCGGCGGAGCTGGCCGGAAACGCCGAGAGCTGGGATTGAACGTC GTACGAAGCAGGAGTCATTTGGCGATGAGTGGTCGCGAGTTTCGTGCTGT TGTTGATGGCGTTTCCCAACCTCCCGAAGCGTCTCACATGTGTTCCCTCG TGTTCGTGAGTGTTTTCCTCCCTCGCTGTGTTTTCTTGCTTTTGATCTAA CTCAATATCGTTTCCCTTTGGGCCACCCATGATACCATATTTCTACACCG CAACGGTACCGGTACAACACTCCAAATTGGAATGGAATGGAATGGAATGT GACTGTTGACAGGGACCTACTTCCGGGAGAGTACACTCAGATGGCTGGGC GAGCCGGTCGAAGAGGTCTTGACAAGGTCGGGACCGTCATCATCACTTGC TGGAGTGAGCCTCCTCCGCTGGTCAACCTGAAGGCATGTACCCCGTATCA TAAAGCGTGTACGTTAACTACTACACCGGGACGGCCGGGATACAGCACAG CACTGGAGTGGGGATGCGATTCGTGCACAGCTACGTCGTTCAGTCTCGAA TGATTCGTCGCCCGTATTTTGTCCGCTTCTTGTGGACGTTTTGCGTGACT TGCTTGAACCTCAACGGTCGTTGCTGTTTTTATGTTTTTGTTGTTGAGGG GTTAAAGGAAGCAGCACGGGTAGCGGAATCAATGATTTGAGATAGATACA CACAAGCACGTGTGTAGTGAAGCCTTTTGTGGCAAGACAAGACAACGTTT TTTGTTTGTGGTGAGGCGAGAGCTTGAAGTTGAGAGGCGAGTGAGCATTT CAATGAATGAAGGACATGCTATTCTCGCTCGAGGTGGAGTGGGTGCGGTT GGTGCCACGCCATGTACCACTTCCTAAGTTGTACCAGGTACGTGAGGTTT CAGCTGGCACTAGCAGCGCTTGCGCAAAGTCATCTGTCACACGAGGCTGT TTGTCGTGCTTCAACGCTGATCGTGACCACGATGCTGCTGCTACCGCTGC TACTCACGATGACGGCGATACAGATGATGCTCACTGGTGCTGCTACGAAG CTCGAGAGCCAGTTCCGGCTGAAGTGGAACATGATTCTCAACTTGCTCAG GGTTGAAGACATGTGAGATTTTTTCACCTTCTGGTGGCGCAAGTTTTCAT GGATTAGAACCCACCAAATGCTTTCCCTCTCAATAACGTTCCGGGGTGAC GGCGAAATCAGAAAGCTATCCGAAGGAAAGAAGATGGGTGGAAACGAGTA AGGAAATGCACTTTGCGTCACTGAGGGAGGAGGCCAGACAACAGGGCAAG ACCGATGATACCCTTCCGTACTTTGTTACAAACCACTGCTGTGCGTGCGC GCGTTTGGTCCGTGCGCATGGCCATCCGCTCCTTCCCTCTCGCGTTACCA CTCTCCCCATGTTGTCTCATCATCCGTCTGTCTGTCATGTCTGCCTGTCA GGTCCGTGGAAGACATGATGAAGCGAAGCTTCAGCGAGTTCCGCACACAG AGGGAGCTGGGGGCGAAAGACTTGCCCAAGGTCATGAAGAAGTGCACGGA CGCGCTCAACAACCTCAAGGCTACGGTACGGACGGTACAGCAGAGCCCGC GCGGGGAATCCACGCGGTCTATTATGAGGTTCTTTTAGTGGTCGGGCGCG CGAAAGTGACCGTTGCCGTGAAGGGCTGCAGAAAAGCAGCAGTAGCCCGG TGCAAACACCGCATTGTGTCCCTCTGAACAACATGATGTAGGACTGTGTC ACGTGGCGGGTGGGGGACGATCAGGCCGTCCTGTGTGTTCTATGACACTG CTGTTCGGAGGTCCTCGAGCGGGGGCGATGCTAAATATTTTGTGTGCTCT CGACATGGCACGGGCGGGGGTACGTAGGGTGCTGCCGCTTGGCTACCGCC TTGTCGCGTACTGTCCCCACAACCGCTGCGCTGCCGCAGTATCGCGCAGC CTCCCTTTTGATGTGGTTGTTGCCAACATCGTCTTGGCAGGCTGAGCCGT GCATCCGATCGGAGCAGTCGACGATAGAGGAGTATCAGCTCCTGAGCGCC ATGGCCTCGGAGAGATCGAGCGACCTCCTGGACTACGCCATGAGGTAGGG TAACTACTGCTGGGTGGTTGGACACTTGACTTTGTGTTTCACGCGGAAAA TGAGGTGTGGGTGGTGCCATGTTGCAAGCAACTTCGGCGATGCCCGATAA CGTCTTATTGGTTGTGGAGTTGTGTTGTGCCTCATGTACGATGCGCCTAC AGAAGGTTCGTCGTCCAGAATTCCCACCACTGGAGCATGAACGAAGTACA TTTCGAAGCCTGGGGTAATCAATTACGGTTTGCCAACGCTTGATCGCCCG CTTGTCGTCTAGCACCACTGTCCGTGCGCCTATTGCTATCCGTCGCTGCC GACAGAGAGGATTCGCTGCGCTACAATTGTTGTTGTTTGGAGCGCCGCTG GCGAGAGAACACCTTCGCGGAAGTCACAGCAGCTGTTGAACGGGCATGCG GTAGCAAGGACCTCGTTTGTTTTTCTCACGAGGCTGTGTGAGTGAGCTGC CAGCGATACAACCATTCGGAGAAGAATCAAAACGTTCGCTTGTTGACCAA ATAGTGGTATTGCTGTTTTGTCGTTGGACCCCTTTTTTTTGTTTTTGGGC ACAGGAGCTCTAAGAACGCCCGGTCCGTGCTGGGGTCGAAACGAGGCCTG ATCATCACACACAAGAAGCTGGTCAACGCGCCTGCGGTGGTACTGAGGGT AAGACGAGAGCAGAAGAGAAGAGAAGAATAGAGTAGAGAGGGTCGCCCTC AAGTGCTTCTTCATGACGTACACGATGAGCAAGTTGCAGTATCTCGTCAG ACGGTAGTATGTAGTACGCCTGTACTGCTCAGGGATGTACCGACCAAGAA GGCAAAAGCATGATCACTCACCACTTGGCAAGTTGGTGCAGCCTTAGAAC TTCAGCAGTCTCGATATCGCAAGCATACAGCAGCAATGCACAATTTAGTT TCTATACCTATTGGTCACGCGACGGACGCGGTCCAGTAGACGTCAGGTGA TTGTACTCGAGCGTAGGCACAAATTTTGTCGAGTGTTTTCGACTTATCTG TTGTAGTTATGAGTCGATTCCTTATCGATTCTAATTGATGGTAAATTAGT TGATTCTTATCGTTGTAAATCGGTTCTATCTTTGTTGATTCCAATCGATT CTAATCTAATCGATTCCAATGCAATTGATTGTAGTCGAGTGTAACCGATC GTAGTTGTATGTAGCCGTGCGGCGTTCGGCCGCTGTGGTGTCCATGCAGA TCCGCTGTAGGTAAAATGGCACGTGTGGTGTTCTTGCCGAGGGATGTGAA TCGTCACTGTTTCTTCAGAGATGGAGTTAGAAAGAGGGACACAGTTACAA AGACAGACAGGCAGACAGGAAGACAGAGACAGGAGCGATTTTTTCGTTCG GTTTCGCGGTTGTGATTGGCTTGGCTTGGCAGGGCCACGACGAACCCGGG GGGCGAGGGTCAACAGCGGCAGCACAATCAGCTGGAGGTGCTCAGGACTT CTTGAGGGCAGCAAGAGCCCATGCCCAGGTGGGCGGGATGAGGGATGAGG CATGGCGAATCGAGACGATTGGACAGTTCAGAAACGGGGTGATGCTCACT TTTTCCTTCCGTGCTAGCGGAGCCTGTTTCAAGGGAGAGGTGGAACTGGA TAGCTTTTCGTTGTTGATGTTTTATGTGTGTTTCAAGCGGGACGCATTTA GCATCTCCTGAACCGTCAAGGTCATTCCCACTGTAGGTGTGCAACAGATT GGGGAGTACTTTCTACCTGATACAAAGACAGCCATTCGAGGAGACCCCGT GGTAACAATGTTGATTGAAGGCCTGATGGGAAGACAGGTATCTTGGAAGC GTAGGACCCATGCGCAAGCAAGCACTCAAAGTGAGAACAGATCCTGAGCA GCACACTCTCCTTCCTGTCTCCTTGCCAAAGTGTAAACGGGAGCGGGCTG ATGCTACCACGGGAGGAGCCTCCCAAGCGGTCATTAGCGTCGACGAATGA GAGACCTTGAAAAGCAGGTGGTTATTTCGGAACACGTCTTGGCGCTATCT CCTAGGAACTGCTCTCTGCTTGCAGGATAAGTTTCTTCTTGCTTATCGCA GACCTCCCAGGTCTCCCCTCCCTATTCCATTCCAAACCGTGTGGTACAAT GGTGTGCTGATCCCCTCGTTTTTGTCCTGTTGCCTCTGTTTCGTTCGTAG GGGTCGCTGCCAGGAGCAGTGCCGACGGGGGAAGCGGAGATGAAGATGTT GGTTTTGGTCCTGTGCCACGAGGGCTTCGTTAAGCCAGCTGGGGCTACCT CTGCTGACAAGGTACTGCAGTTTCTGTATTACGTGGGCTTTAAGCCGGCC TTAGGCGCTCAAAAAAATGCCACCCTTACGGGTCTTGCCGTCAACGCGGG CTGGTGTTGAATGCTCGCCGGTGTTTTCTTGCTCTCTTCGTGCTTGTAGT CGCGTCAAGAACTTGTGGTAACCCAAAGCACCGAAGTGTGTACGGAAAGA CTTGTGGGGGAAGTTGACGTTGCCACGATTGTGTTGTTTTTGCCCCCCCA CGTTGATGTGTGTGGTGTATGCCCGTCAGTTGGGTTTCTCTTTCTGCGAA TCACGCGCTGGACGTGTTGCGGGTTAGAAGCACGACAGATACACCGTCAC CCTTCGTTCGCATCATGCTTTCATATGTTAAGATGGGCAGTACCCCTTGT ACCTTTTCTGGGATGCTGACCCCCAATCTCCACGCCCTTGCTTCGCGTCG AGCTCGATTCGATTTGAGTCCGGTGCACGACGCCACAAACCGCAACGACG CCCCTTGTTTTTGGCGGCCCGCTCCAGTTACCGAAGGCTTCCGTGTACTT AAACATGTTTATTTTTCTTGTGCAAGCGTCACCGTGTGCTGTTAGTGGCA CAGCAGCGACACAAGAATAGTCTAGCTCCGCCCCCCCTCACGGCCCCCAG GTCATGGCCACTAGAAGCGTTGTCCCGTTTTGTAGCCGCATTGAGACTGA CGTCCTCTAGTTGGTCAACCGGTTAGCGCGGGAAAACAAACACACACACA CACACACGACGTCATTTCATTGGTCAGCCGGTTAGCGCGGTCGATGCTTG TTATAAAAAAACACACACACACGATCACAGGTTGCTCCCGAGAGCGAGCC CATCGACTCCTTCGCAAGGCCGAGCGGTAACGTGGTCATGAAGCGCAAGG ACGACGACGACGGAGGGTGGGGAGGAAGGACCGGCGGGGGTGGTGGATGG GGCGGCAAGGCCGGGAAAGCAGTTTCCGGGAGAGGAAGCGCTAAGGGCAA GGTGCTCAAGGCTGGCACCTACGGGGAGGCGGCGGGTCGCACGTTCGCCG TGCTAGAGGTGGGCGAGCTGCTGCTGTGTGCGCGAACGTGTGTTGATTTT TTGTTGTTGTAAAATAAGTTTGCCTCAATCCGTGGATAAACTGAAGGACA GAGGAACTATTTTCTGTCGCGCATGAATGTCTGTGTGTCTTGTAGCACTC AGGGGTTTTGTTTGTGCTGTTTCTCGGAGACCCTTGGTGTTTGGCAGGCA AGGCCACCCCTTTTTTTTGTGTTGGAATCCGCAGCAACACCGTCAGTCAT GGGACTTGCCCTGCTTGCACACCTAACAAGAATGATGCGTTCAATCTGTT AAGTCTGAGTGAAGATCCCGGGGCTCTGCGTTTCTTTGTCGCGTTTAATT TCGTTCTGTTTGGTGTGTGTGAACAGATGGAAAAGATGGCTCCAAACCTG GGCATAAGTTGCCTCAGACTTTGTTGAACTACTTGCCAACCCGGCCGGCC CCCGTAAACCTCTCAACCTTCACCCCAGGCTCCCCTCCTGCAACATCCAT CCCTCGACGATCTTGTCGACACTATTTGTCAACCCCGTCGACAGGCCCCG ATCGTCCGGAAAACCCCTCAACCCTCCTGGGGTAGTTGAACGCGACGCAG TTGGTTGTACGTGCAATATTGTAGCAGATCTCTCACCGTTTTGCAGCTCT GGGGTAGCCGTGTCTAGAACACAACTGATCTTCAGCTCATTCCTGTTGCT GTTGTTGTTTGTGTCGGCGAGCTTAGGTGGGACTGGGCGACATCGTTAGC CTGGCGAAGGCGGTGAAGAAGCTTAACGCAGAGGACGTGCTTGGAGGAGA CAGCACGGCACTGGCCTCTGCCGTCAAGGTCGGTCGAGTTCCCGGGGGGG ATGGATTGCTCAAGATCCCCGTTTTGATATTCTTCTCTCGGTTCCTGTCT CTTCCAGGGGCATTTTCTGTTTCTTGCTTGTCCGGCTCTGCGCATTGTTG CTATGTATCCCACGCGTTTACAGTGTGTCCAGTCGATCGTCCGTCGTTCT TCGTGCTTGTCGCCGCTAAAGAACGGAAAGAACAAGCACGCTTTTCGAGC ATCTCTAGCACAACGTCTTGCCACTTGGTTTTCGTGTTCTAGGTGCGGCA AGGACAAGGTGTAGACTGGCGCCCAGAATAGATGGGACGTAAGGCACGTA CGCCAACACACAGTATTCTCCCCTCTTTGCGAAAGACACTCGGCCACCAC CTAGCCATCATCGTTTTCCGACACGTCGGTGGGCAGGTCTATGCCCTGAC CTTGCTCCCCCCGCTCCTAACCGCTTGCTGCTTTCTCTCTCTCTGCCACG CCGGTGTGCGGTTTGGTCTCTCGGGTGCACGTCTCGTTTGTGTTGCCGAC GGCGAGGGCAGACGTTGGTGGAGATGGAGAGCACCCTCCCGTCTGAACGC GACCCCAAGGGAACGTTCACGCCCTTAAATCTTGCCAACGAGCTCAAGGT TCAGGTAGGCGTGGTTGGCTTCGAAGGTGTAGCTCTGCCGTAGGTGACAA GGTGTCCTGGAGGGTACGAAGCACCTGTAAAAGGTTTATAAAAGCTGCCT TTGTGGTGCTAACTCGCCAAGAACACATGCGTTTTGCCTGTTGACTCGTG TTGGAGGCGTGAAGTTTGCCGTTGTAAATCAATCCCTCTCAAGCATTCTT ATCGTTGTTGGGTTTGCTTTTTATTGTTGGCGGCATTGTTTTCCTCCGAA ACGCGACGATTTTTTGTCAGTTGCGAGATGTGAAAAAAAGGCGGCACTCG AGATACGAAGGAATATGTTTCGGGTTGTTCATGGGAATACCACTAGTCTT TATTTACCACTTTTTTTTTTGTGTCTTCACTTGACATCAGCGCTCACAGC GTTTGTGCCGTGTACTCCAACCCGTGGTCACACAGAAGGGTTCCTCTCCC TGAGAAATAGGGAAAAAATCTGAAGGAGTTGAGCCGATATGGTCTTGCTT TCTCTCGTCTTTCCCTCGATACATATACGGTACTAGGTTTTTGAAGTCCA TACATTCGACGCTTTGCTTTTGGCAGCGACAGTATCATCGAAATGTGCAC CGGCTAACTATTTTTGGAACGCGCAACATATTCGTTCGCATTTGCCTCGA TCTTGTCCTGCTGATGATGTTCTTTCCTTAGGAAATTGGCTTCAGGGAGA GTTCCGCAGAGCTGCTCAACGTGCTCGAAAGCCGCGCCGCATCGCAGTGC CACACTTGTCCCAAGCTTTCGGAGCAGTATCACCTGCAGCAAAAGTGAGA AGCGCGTGCGTGCTACCGGTGGCAAGTGTTGGTTGGCCTCGGTACGTGGA TGCCACAACGCACCCGCGGAAACGGTGTTTCTTCGTAAATACGCGCACCG GTATCCGAGACTCGCCACCACACTACAAGATGTTAATTTTGCCCCGGGGT TCGTTTCTTATTAACGCATATCTGTGGGGTAACCGGACAGGGAATATATA GGTTGTAGTGTACTTACTGGTAGGGTTCTTGACTGACCGCCTGTTCTTGT GATAAGCTTGCTATGATTCTTTTCATGAGCCCAGAGTTGTTTTTTCTCCT AGGTTCTACGGTGGTGGCACGTTCTGTAGGGTTTGAGGCGTTCGGGTTTT GGTCAGGTTCAGCTGAGTCATCGCCTTAAGGCAGGTTCCTTTTGGTGCCT GCTATGCACCCCGCTGGAGGAGACGATGATTTTGCGCACTTCGGTGGCAA GTGTCCCGTCTGATCCATGCTACGGTCGCACCTTGTCAAGATCACCGTGC TTGCTGTAAGGGTTGTGTGGGTTGTGTGGCAGTCAACGCGTTCCCCGGTG GCCGGCGTGAGGTAGGCAAGTATTTCGTGGCTTTGTGGTTGCTTGTCATC CCTCACCATGCCGTGCAATTCTCTGTCTACCGTATGCGTATCGCTGTAGG CGGGACAAACTCGAGAGGAGGATCGAGCTTCTGGGGCACGCCTTGAGCAG CGAGGCGCTGTCGCTTTTCCCTGACTTCCAGCAGCGCCTGGGGGTGCTCA GGAGGTGCGATGTGGCACTCGGACTCCGCTTAGTCGGAGACGAGTAGGGT GGCGTGGCTGTGTTTGGTAGTTTTGGTGACACGTCTGGGTTATTTTATCT ACACAATGTCTAGCACGGGCTTTTCGGGGCTTAAATTGAAGCGTATTGAA TCAGACTCACAGCACACAGAATGCCGATCAGAACGTGGTGCGTGTCAGGG CTACTTGTCAGCGCTAATCTAGTTTTTTTTTTTTTTTTGTTTTTTTTTTT AAATCAGCGCTCACAGCACCAGTGCCGTTTACTCCAACCCGTGGTCACAC AGAAGAACCCCTCTTTACCCTCCCCTCCTGCGGTTCTTCGCCTTCAATTT TTAATGCGAGAAGAGTTCAGCACTCTCTTCCCTCCGTGTAAACACGAACT AGCGCTGTCCACTTGGCCAGGAGCGGAAGCGAGAGAAAAACTCACGCTGC AAGGAAAACTCGCCTACGCCGGGGTTCGTACCCCTGATCTGGCCTCTTGA AGGCATCGAGGTTTCCAACTAGACCACCGGATCAACCGGCTTCAAGAGCC ACCGTCAGCACGTGTCGAACACTTGGGGATCCGAGACGCAAGCGACAGCC TTCTGTTCCCAAGGCTTGTTGCTTCGAATCTGCTGCTGCCACACACTTGC GATTGTTCCTCTTGCCTGTCGTGGTCTGCATGCAGCCTGGGCTACGTGGA GGGAAACACGGTGCAGCTCAAGGGGAGAGTCGCGTGTGAGATCAACACGT GTGACGAGCTGATTGCCACGGAGATGGTGTTCGAAAATGTTTTGGAGAGT CTCGACCCCCCCGAGATCGCAGGTCAGTCGTTCCTTCGGTTCACGCCCGT ACCATAGAATACCATACCATACGATAGTATGGTATCAAGAACACTCAATC ATGCGGTACGCCCCGCGTGTTTTAGAGACGCAAACGTCGCAGTTCATCGC GCACTGCCACATGATCTCCTCAGTATTGCCAAACGGTGCGAGTTTCACCA TTAGTTTGCACCCGCCTTCGACCCCTGAAGAATGTGTTTTGCAGAGTACA CAAACTTTTGTTTGAACCGAGGTGTACCCAAGTGCTGCCCCACTCGGCTC GAAATGATAGTGTTGTATGCATACAAAGGGATCGGTTTTTACAAGAGGGA CTATTCGTGTGACCTCATGAAGAGCTAGCTCCTATCGCGCGTAGCTCACG GCCCCACAGCGGTTTTTGCCTCGGAAGGGATGTTGTCTCTGAGCCACTTT TTGTAATATTCGCGACCACCTATGCGAGAAAATAAATTAATGAGGAAATA GAACAATGAGGTGGTACGCAAACTCTACCCCTACCCCTACCCCAACTTCC CCCATTGCATGCTCTATCCAACATGCTTACTCAATAGAAAAGGGGAAATA GAACAGGGAGGGGGTAAGCAGATCCCTATACCTGGGTAAGTTTAACCCAA CTTCCCCAATTGAATTCTCTATCCAACATGCGTATTTAATAGAAAAGCCC TGCGAAAACTACTGAATTAATCGTGCCTCCCTAGTTAGTCCTTCCTCCGA CATAGAATACACTAACTTGCCGACTCGACCTTGCCTCGCTGTTCTGTTGT CCCTGCTCATGCTTGGATTTTGCCTCGACGCACCAGGAATCTTGTCGGCA CTTATTTTCCAGGAGAAGACGCAGAACGAGCCTCCCCTGACGGACAGGCT ACAGACCGCTGTTGCTCAGGCACGCACACGTGCCGTAGGCATACGTGTGA TACACCTCCATAGAGGGTTGAAGAGCGAAATCACCAGCTTGAAACGAACG TAATTGTGATGGGATGAGGGTATGGTCGTCATTGGTCGTGAGTGATCCTG TTTCTCACTCAACCGGGACGTCCTTGACGAATGCATCTCAACCGCTGTAT TGACTTCGTTCCCTCCCACCGAGCACATTTCGTCGTGG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1329:2..12389+

>mRNA_Ecto-sp13_S_contig1329.2635.1 ID=mRNA_Ecto-sp13_S_contig1329.2635.1|Name=mRNA_Ecto-sp13_S_contig1329.2635.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1884bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1329:2..12389+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCTGTCTCGAGGCGTCGGCGTGCACCACGGTGGGCTGCTCCCCATCCT
CAAGGCAAGTTCTGAGATTGTGGAGATTTGCTTCAGCCGGGGATTGGTGA
AGGTCTTGTTCGCTACCGAGACGTTTGCCATGGGAGTCAACATGCCCGCC
AGAACCGTCGTGTTCAACGGAACCAGAAAGCACGACGGAAAAGATTTCAG
GGACCTACTTCCGGGAGAGTACACTCAGATGGCTGGGCGAGCCGGTCGAA
GAGGTCTTGACAAGGTCGGGACCGTCATCATCACTTGCTGGAGTGAGCCT
CCTCCGCTGGTCAACCTGAAGATGATGCTCACTGGTGCTGCTACGAAGCT
CGAGAGCCAGTTCCGGCTGAAGTGGAACATGATTCTCAACTTGCTCAGGG
TTGAAGACATGTCCGTGGAAGACATGATGAAGCGAAGCTTCAGCGAGTTC
CGCACACAGAGGGAGCTGGGGGCGAAAGACTTGCCCAAGGTCATGAAGAA
GTGCACGGACGCGCTCAACAACCTCAAGGCTACGGCTGAGCCGTGCATCC
GATCGGAGCAGTCGACGATAGAGGAGTATCAGCTCCTGAGCGCCATGGCC
TCGGAGAGATCGAGCGACCTCCTGGACTACGCCATGAGGAGCTCTAAGAA
CGCCCGGTCCGTGCTGGGGTCGAAACGAGGCCTGATCATCACACACAAGA
AGCTGGTCAACGCGCCTGCGGTGGTACTGAGGGGCCACGACGAACCCGGG
GGGCGAGGGTCAACAGCGGCAGCACAATCAGCTGGAGGTGCTCAGGACTT
CTTGAGGGCAGCAAGAGCCCATGCCCAGGGGTCGCTGCCAGGAGCAGTGC
CGACGGGGGAAGCGGAGATGAAGATGTTGGTTTTGGTCCTGTGCCACGAG
GGCTTCGTTAAGCCAGCTGGGGCTACCTCTGCTGACAAGGTTGCTCCCGA
GAGCGAGCCCATCGACTCCTTCGCAAGGCCGAGCGGTAACGTGGTCATGA
AGCGCAAGGACGACGACGACGGAGGGTGGGGAGGAAGGACCGGCGGGGGT
GGTGGATGGGGCGGCAAGGCCGGGAAAGCAGTTTCCGGGAGAGGAAGCGC
TAAGGGCAAGGTGCTCAAGGCTGGCACCTACGGGGAGGCGGCGGGTCGCA
CGTTCGCCGTGCTAGAGGTGGGACTGGGCGACATCGTTAGCCTGGCGAAG
GCGGTGAAGAAGCTTAACGCAGAGGACGTGCTTGGAGGAGACAGCACGGC
ACTGGCCTCTGCCGTCAAGACGTTGGTGGAGATGGAGAGCACCCTCCCGT
CTGAACGCGACCCCAAGGGAACGTTCACGCCCTTAAATCTTGCCAACGAG
CTCAAGGTTCAGGAAATTGGCTTCAGGGAGAGTTCCGCAGAGCTGCTCAA
CGTGCTCGAAAGCCGCGCCGCATCGCAGTGCCACACTTGTCCCAAGCTTT
CGGAGCAGTATCACCTGCAGCAAAAGCGGGACAAACTCGAGAGGAGGATC
GAGCTTCTGGGGCACGCCTTGAGCAGCGAGGCGCTGTCGCTTTTCCCTGA
CTTCCAGCAGCGCCTGGGGGTGCTCAGGAGCCTGGGCTACGTGGAGGGAA
ACACGGTGCAGCTCAAGGGGAGAGTCGCGTGTGAGATCAACACGTGTGAC
GAGCTGATTGCCACGGAGATGGTGTTCGAAAATGTTTTGGAGAGTCTCGA
CCCCCCCGAGATCGCAGGAATCTTGTCGGCACTTATTTTCCAGGAGAAGA
CGCAGAACGAGCCTCCCCTGACGGACAGGCTACAGACCGCTGTTGCTCAG
GCACGCACACGTGCCGTAGGCATACGTGTGATACACCTCCATAGAGGGTT
GAAGAGCGAAATCACCAGCTTGAAACGAACGTAA
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