mRNA_Ecto-sp13_S_contig13289.2634.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig13289.2634.1 vs. uniprot
Match: A0A6H5KUF9_9PHAE (Palmitoyltransferase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUF9_9PHAE) HSP 1 Score: 303 bits (776), Expect = 1.490e-94 Identity = 150/178 (84.27%), Postives = 154/178 (86.52%), Query Frame = 1
Query: 1288 VGPNWMCMLATYGLVLTPTLALLILVTGAEYWAASFIVCITGSALLLAFSMTACSDPGIVYRPAERRIPXXXXXXXXXXXXXXXXXXXAAVAEATLPPMAMEEGGVLCGRCDVKRPAGAIHCNECNVCVTKFDHHCPWTGKCIGEKNIRFFYLFLGCLSLHVFVVGALALMPSVKRAL 1821
VGPNWMCMLATYGLVLTPTLALLILVTGA+YW ASFIVCITGSALLLAFSMTACSDPGIVYRPAERRIP AVA+ATLPPMAMEEGG+LCGRCDVKRPAGAIHC CNVCVTKFDHHCPWTGKCIGEKNIRFFYLFLGCL LHVFVVGALALMPSVK+AL
Sbjct: 50 VGPNWMCMLATYGLVLTPTLALLILVTGAKYWVASFIVCITGSALLLAFSMTACSDPGIVYRPAERRIPPPAAVGGESGGRGGE----TAVADATLPPMAMEEGGLLCGRCDVKRPAGAIHCTACNVCVTKFDHHCPWTGKCIGEKNIRFFYLFLGCLFLHVFVVGALALMPSVKQAL 223
BLAST of mRNA_Ecto-sp13_S_contig13289.2634.1 vs. uniprot
Match: D7G1J4_ECTSI (Palmitoyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1J4_ECTSI) HSP 1 Score: 256 bits (653), Expect = 1.510e-77 Identity = 143/152 (94.08%), Postives = 145/152 (95.39%), Query Frame = 1
Query: 1366 TGAEYWAASFIVCITGSALLLAFSMTACSDPGIVYRPAERRIPXXXXXXXXXXXXXXXXXXXAAVAEATLPPMAMEEGGVLCGRCDVKRPAGAIHCNECNVCVTKFDHHCPWTGKCIGEKNIRFFYLFLGCLSLHVFVVGALALMPSVKRAL 1821
TGAEYW ASFIVCITGSALLLAFSMTACSDPGIVYRPAERRIPXXXXXXXXXXXXXXXXXX +A LPPMAMEEGGVLCGRCDVKRPAGAIHCNECNVCVTKFDHHCPWTGKCIGEKNIRFFYLFLGCLSLHVFVVGALALMPSVK+AL
Sbjct: 4 TGAEYWVASFIVCITGSALLLAFSMTACSDPGIVYRPAERRIPXXXXXXXXXXXXXXXXXXE----DAALPPMAMEEGGVLCGRCDVKRPAGAIHCNECNVCVTKFDHHCPWTGKCIGEKNIRFFYLFLGCLSLHVFVVGALALMPSVKQAL 151
BLAST of mRNA_Ecto-sp13_S_contig13289.2634.1 vs. uniprot
Match: A0A8J2SI51_9STRA (Palmitoyltransferase n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SI51_9STRA) HSP 1 Score: 140 bits (353), Expect = 3.630e-34 Identity = 76/173 (43.93%), Postives = 96/173 (55.49%), Query Frame = 1
Query: 1288 VGPNWMCMLATYGLVLTPTLALLILVTGAEYWAASFIVCITGSALLLAFSMTACSDPGIVYRPAERRIPXXXXXXXXXXXXXXXXXXXAAVAEATLPPMAMEEGGV-LCGRCDVKRPAGAIHCNECNVCVTKFDHHCPWTGKCIGEKNIRFFYLFLGCLSLHVF--VVGALAL 1797
VGP+W CML TY LVL PT+A +I + G +WAA + +TG A L+AFS ACSDPG++YR A + EG V C RCDV RP A HC EC VC+ DHHCPWTGKCIG++ + F+ FL CLS+H+ VVGA+ +
Sbjct: 80 VGPDWCCMLCTYTLVLVPTVAFIIFI-GEHHWAARYGAVLTGGATLVAFSSAACSDPGVIYREASQ---------------------------------TGNEGDVHSCRRCDVIRPHEARHCYECQVCIDDLDHHCPWTGKCIGKRTLFAFHAFLICLSVHILFVVVGAIVV 218
BLAST of mRNA_Ecto-sp13_S_contig13289.2634.1 vs. uniprot
Match: A0A5D6XHI2_9STRA (Palmitoyltransferase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XHI2_9STRA) HSP 1 Score: 128 bits (322), Expect = 2.730e-30 Identity = 69/194 (35.57%), Postives = 98/194 (50.52%), Query Frame = 1
Query: 1246 HFFSLLFLRRCWLQVGPNWMCMLATYGLVLTPTLALLILVTGAEYWAASFIVCITGSALLL-------AFSMTACSDPGIVYRPAERRIPXXXXXXXXXXXXXXXXXXXAAVAEATLPPMAMEEG----GVLCGRCDVKRPAGAIHCNECNVCVTKFDHHCPWTGKCIGEKNIRFFYLFLGCLSLHVFVVGALA 1794
H F L++ +GPNW+CML TY + L P A ++ +V ALL+ AF+M ACSDPG+V+ E PP ++ G GV+C +C ++RP A HC++C VC+ + DHHCPWTGKCIG + +R+FY+FL C+S+HV +VG A
Sbjct: 44 HHFPLMW------HIGPNWLCMLVTYAISLGPL---------AFFFMKDDVVLALRVALLVSVVATTCAFTMVACSDPGVVFESCE-------------------------------PPATLQVGDAELGVICAQCQIRRPYDASHCSDCGVCIAQLDHHCPWTGKCIGGRTLRWFYVFLACVSVHVVLVGVTA 191
BLAST of mRNA_Ecto-sp13_S_contig13289.2634.1 vs. uniprot
Match: I2CS30_NANGC (Palmitoyltransferase n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=I2CS30_NANGC) HSP 1 Score: 128 bits (321), Expect = 1.880e-29 Identity = 75/203 (36.95%), Postives = 101/203 (49.75%), Query Frame = 1
Query: 1288 VGPNWMCMLATYGLVLTPTLALLILVTGAEYWAASFIVCITGSALLLA---FSMTACSDPGIVYRPAERRIPXXXXXXXXXXXXXXXXXXXAAVAEATLP------PMAMEEGG----------VLCGRCDVKRPAGAIHCNECNVCVTKFDHHCPWTGKCIGEKNIRFFYLFLGCLSLHVFVVGALALMPSVKRAL*GNRRV 1839
VGP+W CML TY +V P++ LILV +S IV + ++ +L FS+TACSDPGIV+ ATLP +A G + C RC++ RP GA HC EC VCV DHHCPWTGKCIG KN++FFYLFL L++H+ +G++ M ++ R+
Sbjct: 59 VGPDWPCMLITYTMVCVPSIFFLILVAPRV---SSVIVWVGLASFMLTLFFFSLTACSDPGIVFWQLPNGGEERSIDPESGTVVLHNNDCGNGSISATLPVVDQSTSLAASSQGFSSARNPVPQIPCSRCELSRPMGASHCYECEVCVKDLDHHCPWTGKCIGRKNLQFFYLFLTFLTVHIIFLGSVTAMTAINNTFHKGERL 258
BLAST of mRNA_Ecto-sp13_S_contig13289.2634.1 vs. uniprot
Match: A0A8K1CEC4_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CEC4_PYTOL) HSP 1 Score: 127 bits (318), Expect = 1.970e-29 Identity = 62/177 (35.03%), Postives = 93/177 (52.54%), Query Frame = 1
Query: 1288 VGPNWMCMLATYGLVLTPTLALLILVTGAEYWAASFIVCITGSALLLAFSMTACSDPGIVYRPAERRIPXXXXXXXXXXXXXXXXXXXAAVAEATLPPMAME-EGGVLCGRCDVKRPAGAIHCNECNVCVTKFDHHCPWTGKCIGEKNIRFFYLFLGCLSLHVFVVGALALMPSVKR 1815
+GPNW CML TY + + P + L LVT + + +T + FSM ACSDPG+V+ E A + + L E + GV+C +C ++RP A HC++C VCV + DHHCPWTGKCIG++ ++ FY FL C+++H+ +V + + R
Sbjct: 71 IGPNWPCMLVTYAIAIVPMI--LALVTDKVAYGLRIAMLVTSVITTVIFSMVACSDPGVVFESYE---------------------PLATMEDGALQASRDEPDRGVICAQCQLRRPRNASHCSDCRVCVCELDHHCPWTGKCIGKRTLQLFYAFLWCITIHIVLVVVSFALAYISR 224
BLAST of mRNA_Ecto-sp13_S_contig13289.2634.1 vs. uniprot
Match: W2Q3B8_PHYPN (Palmitoyltransferase n=13 Tax=Phytophthora TaxID=4783 RepID=W2Q3B8_PHYPN) HSP 1 Score: 124 bits (310), Expect = 1.250e-28 Identity = 66/178 (37.08%), Postives = 97/178 (54.49%), Query Frame = 1
Query: 1288 VGPNWMCMLATYGLVLTPTLALLI--LVTGAEYWAASFIVCITGSALLLAFSMTACSDPGIVYRPAERRIPXXXXXXXXXXXXXXXXXXXAAVAEATLPPMAMEEGGVLCGRCDVKRPAGAIHCNECNVCVTKFDHHCPWTGKCIGEKNIRFFYLFLGCLSLHVFVVGALALMPSVKR 1815
VGP+W CML TY L + P ++ G + A +C+T ++ F+M ACSDPG+V++ E VA A E G++C +C+V+RP A HC++C VCV + DHHCPWTGKC+GE+ I++FY+FL +SLH ++GA+ L+ R
Sbjct: 57 VGPHWGCMLVTYCLAIGPAFFFFADDMLLGLKV-ALVVSICLTTAS----FTMVACSDPGVVFQDLE-------------------------VANAL---QGDVETGIICAQCEVRRPLNASHCSDCGVCVRELDHHCPWTGKCVGERTIKWFYVFLTFISLHCMLIGAVCLVTFAAR 201
BLAST of mRNA_Ecto-sp13_S_contig13289.2634.1 vs. uniprot
Match: M4BNT3_HYAAE (Palmitoyltransferase n=2 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BNT3_HYAAE) HSP 1 Score: 123 bits (308), Expect = 1.570e-28 Identity = 63/174 (36.21%), Postives = 92/174 (52.87%), Query Frame = 1
Query: 1288 VGPNWMCMLATYGLVLTPTLALLILVTGAEYW---AASFIVCITGSALLLAFSMTACSDPGIVYRPAERRIPXXXXXXXXXXXXXXXXXXXAAVAEATLPPMAMEEGGVLCGRCDVKRPAGAIHCNECNVCVTKFDHHCPWTGKCIGEKNIRFFYLFLGCLSLHVFVVGALALM 1800
VGP+W C+L TY L + P + L++ V A +C+T +L L ACSDPG+V++ E + E G++C +C+V+RP A HC++C VC+ + DHHCPWTGKCIG++ I+ FY+FL C+SLH +VGA L+
Sbjct: 44 VGPHWGCLLVTYFLAIGPFIFLMLFVDELRLGLQVALFASMCVTTVSLTL----VACSDPGVVFQDVESDVEDV-------------------------------ESGIVCAQCEVRRPLDASHCSDCGVCIRELDHHCPWTGKCIGKRTIKLFYVFLTCISLHCMLVGAACLV 182
BLAST of mRNA_Ecto-sp13_S_contig13289.2634.1 vs. uniprot
Match: A0A024TSR8_9STRA (Palmitoyltransferase n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TSR8_9STRA) HSP 1 Score: 121 bits (304), Expect = 8.910e-28 Identity = 65/171 (38.01%), Postives = 89/171 (52.05%), Query Frame = 1
Query: 1282 LQVGPNWMCMLATYGLVLTPTLALLILVTGAEYWAASFIVCITGSALLLAFSMTACSDPGIVYRPAERRIPXXXXXXXXXXXXXXXXXXXAAVAEATLPPMAMEEGGVLCGRCDVKRPAGAIHCNECNVCVTKFDHHCPWTGKCIGEKNIRFFYLFLGCLSLHV-FVVGAL 1791
L VGPN CML TY +V+ PTL + I TG W + +V ++ + L+FS+ ACSDPG+V + E G+LC C ++RP AIHC EC VC+ DHHCPWTGKCIG+K + +FYLFL + +H+ F +G +
Sbjct: 59 LHVGPNMGCMLITYSIVVAPTL-IFIFATGLASWVSVLLV-VSIALTFLSFSIVACSDPGVVREHYVNA--------------------------------SGEPAGILCAHCQIRRPHNAIHCYECEVCIDGMDHHCPWTGKCIGKKTLYWFYLFLWMICIHITFGIGTV 195
BLAST of mRNA_Ecto-sp13_S_contig13289.2634.1 vs. uniprot
Match: A0A1V9Z9R5_9STRA (Palmitoyltransferase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Z9R5_9STRA) HSP 1 Score: 120 bits (302), Expect = 1.370e-27 Identity = 65/167 (38.92%), Postives = 92/167 (55.09%), Query Frame = 1
Query: 1282 LQVGPNWMCMLATYGLVLTPTLALLILVTGAEYWAASFIVCITGSALLL---AFSMTACSDPGIVYRPAERRIPXXXXXXXXXXXXXXXXXXXAAVAEATLPPMAMEEGGVLCGRCDVKRPAGAIHCNECNVCVTKFDHHCPWTGKCIGEKNIRFFYLFLGCLSLHV 1773
L VGPNW CM+ T+ ++L P+L L+ +Y + S+I + ++L +FSM ACSDPGI+ E + P +EEG VLC C ++RP A+HC EC+VC+ DHHCPWTGKCIG++ I +FYLFL ++LH+
Sbjct: 55 LHVGPNWRCMVFTFLVILAPSLIFLL-----KYRSVSWISIVLVIMIILTFVSFSMVACSDPGII-------------------------------REDYVNPQGIEEG-VLCAHCRIRRPPNAVHCYECDVCIDGLDHHCPWTGKCIGKRTIWWFYLFLWMITLHL 184 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13289.2634.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig13289.2634.1 >prot_Ecto-sp13_S_contig13289.2634.1 ID=prot_Ecto-sp13_S_contig13289.2634.1|Name=mRNA_Ecto-sp13_S_contig13289.2634.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=174bp MCMLATYGLVLTPTLALLILVTGAEYWAASFIVCITGSALLLAFSMTACSback to top mRNA from alignment at Ecto-sp13_S_contig13289:2..4770+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig13289.2634.1 ID=mRNA_Ecto-sp13_S_contig13289.2634.1|Name=mRNA_Ecto-sp13_S_contig13289.2634.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4769bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13289:2..4770+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig13289:2..4770+ >mRNA_Ecto-sp13_S_contig13289.2634.1 ID=mRNA_Ecto-sp13_S_contig13289.2634.1|Name=mRNA_Ecto-sp13_S_contig13289.2634.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=522bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13289:2..4770+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |