mRNA_Ecto-sp13_S_contig13268.2630.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig13268.2630.1 vs. uniprot
Match: A0A6H5K8Z9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8Z9_9PHAE) HSP 1 Score: 412 bits (1059), Expect = 2.330e-140 Identity = 197/200 (98.50%), Postives = 199/200 (99.50%), Query Frame = 1
Query: 1 TPTCVSSQDDRPYPFMEPWSYDGPFERSMSRLRNYLEFNGAKVIASSPRYLRVEFEAANAIPASVDDAEFYFTPGDALVQFRCARRNGPTDFGANRRRMDGIRQALKFESIPVLRNRKRALFFGESPIDSFGPSFGMADPSVIYGDADPMSPPFETPSDALRERYGEGGGGADRPAWWGKPLAEAGGFADWRQMPSPAAA 600
TPTCVSSQDDRPYPFMEPWSYDGPFERSMSRLRNYLEFNGAKVIA+SPRYLRVEFE+ NAIPASVDDAEFYFTPGDALVQFRCARRNGPTDFGANRRRMDGIRQALKFESIPVLRNRKRALFFGESPIDSFGPSFGMADPSVIYGDADPMSPPFETPSDALRERYGEGGGGADRPAWWGKPLAEAGGFADWRQMPSPAAA
Sbjct: 137 TPTCVSSQDDRPYPFMEPWSYDGPFERSMSRLRNYLEFNGAKVIATSPRYLRVEFESPNAIPASVDDAEFYFTPGDALVQFRCARRNGPTDFGANRRRMDGIRQALKFESIPVLRNRKRALFFGESPIDSFGPSFGMADPSVIYGDADPMSPPFETPSDALRERYGEGGGGADRPAWWGKPLAEAGGFADWRQMPSPAAA 336
BLAST of mRNA_Ecto-sp13_S_contig13268.2630.1 vs. uniprot
Match: D8LJJ3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJJ3_ECTSI) HSP 1 Score: 282 bits (722), Expect = 1.150e-89 Identity = 136/137 (99.27%), Postives = 136/137 (99.27%), Query Frame = 1
Query: 1 TPTCVSSQDDRPYPFMEPWSYDGPFERSMSRLRNYLEFNGAKVIASSPRYLRVEFEAANAIPASVDDAEFYFTPGDALVQFRCARRNGPTDFGANRRRMDGIRQALKFESIPVLRNRKRALFFGESPIDSFGPSFGM 411
TPTCVSSQDDRPYPFMEPWSYDGPFERSMSRLRNYLEFNGAKVIASSPRYLRVEFEA NAIPASVDDAEFYFTPGDALVQFRCARRNGPTDFGANRRRMDGIRQALKFESIPVLRNRKRALFFGESPIDSFGPSFGM
Sbjct: 137 TPTCVSSQDDRPYPFMEPWSYDGPFERSMSRLRNYLEFNGAKVIASSPRYLRVEFEAVNAIPASVDDAEFYFTPGDALVQFRCARRNGPTDFGANRRRMDGIRQALKFESIPVLRNRKRALFFGESPIDSFGPSFGM 273
BLAST of mRNA_Ecto-sp13_S_contig13268.2630.1 vs. uniprot
Match: A0A6V1P1K7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1P1K7_HETAK) HSP 1 Score: 169 bits (428), Expect = 4.100e-46 Identity = 93/170 (54.71%), Postives = 113/170 (66.47%), Query Frame = 1
Query: 1 TPTCVSSQDDRPYPFMEPWSYDGPFERSMSRLRNYLE-FNGAKVIASSPRYLRVEFEAANAIPASVDDAEFYFTPGDALVQFRCARRNGPTDFGANRRRMDGIRQALKFESIPVLRNRKRALFFGESPIDSFGPSF------GMADPSVIY-GDADPMSPPFETPSDALR 486
TPTCVSSQDDRPY F+EPW YD R+M RL + LE G K+I + YLRVEF SVDDAE+YFTP D+++QFR ARR+ TDF ANRRRM+ +R AL +E IPVLRNR+RAL F ES +DSFGP+ D +Y GD DP +P +E PS +R
Sbjct: 104 TPTCVSSQDDRPYNFLEPWQYDTTQARAMRRLSDKLESIEGVKIIKKTEDYLRVEFHDMRT--GSVDDAEWYFTPNDSIIQFRAARRDAKTDFAANRRRMENLRIALGYEKIPVLRNRQRALVFFESLLDSFGPATIRDMTPEEMDAMELYRGDLDPRAPAWEAPSKQMR 271
BLAST of mRNA_Ecto-sp13_S_contig13268.2630.1 vs. uniprot
Match: A0A835YWY1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWY1_9STRA) HSP 1 Score: 162 bits (409), Expect = 6.390e-44 Identity = 91/183 (49.73%), Postives = 113/183 (61.75%), Query Frame = 1
Query: 4 PTCVSSQDDRPYPFMEPWSYDGPFERSMSRLRNYL-EFNGAKVIASSPRYLRVEFEAANAIPASVDDAEFYFTPGDALVQFRCARRNGPTDFGANRRRMDGIRQALKFESIPVLRNRKRALFFGESPIDSFGPS-FGMADPSVI----YGDADPMSPPFETPSDALRERYGEGGGGADRPAWW 534
PTCVS+QDD+PY FMEPW+Y+ ++ + + NYL GAK++A S RYLR E + I +VDD E Y TP D VQFR RR+G TD G NR+RM+ +R AL FE IPVLRNR RA FGES +DSFGPS F P + D DP +P FETPS +L++ G WW
Sbjct: 56 PTCVSTQDDKPYCFMEPWAYEVTTSQAKTLIANYLYTLPGAKIVAESERYLRAEVASLGGI--AVDDVELYLTPNDYTVQFRANRRDGVTDLGQNRKRMERMRIALGFEKIPVLRNRTRAFIFGESFLDSFGPSGFNNEVPEEMAPGAMWDRDPKAPVFETPSPSLKKALG---------GWW 227
BLAST of mRNA_Ecto-sp13_S_contig13268.2630.1 vs. uniprot
Match: W7TBJ3_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TBJ3_9STRA) HSP 1 Score: 157 bits (396), Expect = 3.500e-41 Identity = 84/162 (51.85%), Postives = 109/162 (67.28%), Query Frame = 1
Query: 7 TCVSSQDDRPYPFMEPWSY-DGPFERSMSRLRNYLE-FNGAKVIASSPRYLRVEFEAANAIPASVDDAEFYFTPGDALVQFRCARRNGPTDFGANRRRMDGIRQALKFESIPVLRNRKRALFFGESPIDSFGPSFGMADP-----SVIYGDADPMSPPFETP 471
+C SSQDDRP F EPW Y D E++M RLR+Y+E GA+ I++ RYLR E + ++DD EFYFTP D+++QFR ARR D GAN++RM+ IR AL FE IPVLRNR+RALFF ESP+D +GPS+ P YGD+DP++P +E P
Sbjct: 138 SCASSQDDRPPVFQEPWEYEDATQEKAMRRLRSYVENLPGAETISAEDRYLRFEIKE----DGNIDDTEFYFTPNDSIIQFRSARRGDGRDRGANQKRMEKIRIALGFEKIPVLRNRRRALFFLESPLDGWGPSYREDAPRPEDLDQAYGDSDPLAPGWEAP 295
BLAST of mRNA_Ecto-sp13_S_contig13268.2630.1 vs. uniprot
Match: A0A7S2ZDZ8_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZDZ8_9RHOD) HSP 1 Score: 144 bits (364), Expect = 3.760e-37 Identity = 82/159 (51.57%), Postives = 100/159 (62.89%), Query Frame = 1
Query: 7 TCVSSQDDRPYPFMEPWSYDGPFERSMSRLRNYLEFN-GAKVIASSPRYLRVEFEAANAIPASVDDAEFYFTPGDALVQFRCARRNGPTDFGANRRRMDGIRQALKFESIPVLRNRKRALFFGESPIDSFGPS------FGMAD--PSVIYGDADPMSP 456
+CVSSQDD P F EPW YDG + RL LE +++IAS Y+RVEF A +VDDAEFYFTPGD +QFR RR G TDFGAN+ RM+ IR+ L+F +PVLRNR+R F ESP DSFGP G A+ P+ + D DP+SP
Sbjct: 83 SCVSSQDDAPRHFQEPWEYDGTSSSAQIRLEGLLESEYTSRIIASRSGYIRVEFFDAFG---NVDDAEFYFTPGDNTIQFRSNRRGGGTDFGANKLRMESIRKKLRFAKVPVLRNRRRVFVFFESPFDSFGPGTSKNMDVGKAEDGPATRF-DVDPLSP 237
BLAST of mRNA_Ecto-sp13_S_contig13268.2630.1 vs. uniprot
Match: A0A7S2MSC2_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2MSC2_9EUKA) HSP 1 Score: 144 bits (363), Expect = 4.990e-37 Identity = 75/160 (46.88%), Postives = 101/160 (63.12%), Query Frame = 1
Query: 10 CVSSQDDRPYPFMEPWSYDGPFERSMSRLRNYLEFNGAKVIASS-PRYLRVEFEAANAIPASVDDAEFYFTPGDALVQFRCARRNGPTDFGANRRRMDGIRQALKFESIPVLRNRKRALFFGESPIDSFGPSFGMADPSVIYGDADPMSPPFETPSDALR 486
CVSSQDDRP + PW +G + LR + G +V+A RYLR EFE + I ++DD +F+FTP D LVQF+ RR G +DFG NR+R++ +R AL +E +PVLRNR+RAL ESP+DSFGP+ I+ D DPM+ F+ P+ A R
Sbjct: 82 CVSSQDDRPTVWDNPWVSEGSLSDGYTALRRVINKLGGRVVAEDGERYLRAEFEDSGFIGVAIDDCQFFFTPNDTLVQFKAVRRGGASDFGVNRKRLEKLRIALGWEKVPVLRNRRRALVVVESPLDSFGPALY----GDIFEDKDPMAGAFKPPTGAER 237
BLAST of mRNA_Ecto-sp13_S_contig13268.2630.1 vs. uniprot
Match: R1BF77_EMIHU (Uncharacterized protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1BF77_EMIHU) HSP 1 Score: 144 bits (362), Expect = 5.060e-37 Identity = 78/176 (44.32%), Postives = 103/176 (58.52%), Query Frame = 1
Query: 10 CVSSQDDRPYPFMEPWSYDGPFERSMSRLRNYLEFN-GAKVIASSPRYLRVEFEAANAIPASVDDAEFYFTPGDALVQFRCARRNGPTDFGANRRRMDGIRQALKFESIPVLRNRKRALFFGESPIDSFGPSF---------------GMADPSVIYGDADPMSPPFETPSDALRE 489
CVSSQDDRP + PW + +M RLR +E KV+ RYLR EF + + +VDDAEF+FTP D LVQFR ARR DFGANR+R++ R AL +E + VLRNR+RAL ESP DSFGP+ A+ +YGD DP++ P+ P+ ++R+
Sbjct: 43 CVSSQDDRPAVWDNPWVAEQALPSAMERLRRVIELKLQGKVVEQDERYLRAEFASRGPLGDAVDDAEFFFTPDDVLVQFRAARRGDAPDFGANRKRLERARIALGWEKVEVLRNRRRALVVVESPFDSFGPATYERDELGFTNRDLVPAEANQKELYGDLDPLAAPWRKPTPSMRD 218
BLAST of mRNA_Ecto-sp13_S_contig13268.2630.1 vs. uniprot
Match: A0A7S0EPF0_9EUKA (Hypothetical protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0EPF0_9EUKA) HSP 1 Score: 136 bits (342), Expect = 4.720e-34 Identity = 77/180 (42.78%), Postives = 97/180 (53.89%), Query Frame = 1
Query: 7 TCVSSQDDRPYPFMEPWSYDGPFERSMSRLRNYLEFNGAKVIASSPRYLRVEFEAANAIPASVDDAEFYFTPGDALVQFRCARRNGPTDFGANRRRMDGIRQALKFESIPVLRNRKRALFFGESPIDSFGPSFGMADP---------------SVIYGDADPMSPPFETPSDALRERYGE 501
+CVSSQDDRP F PW + + + M L + VI RYLR EF + + SVDD E+YFTP D LVQFR RR DFGAN++R++ +R L +E + +LRNR+RAL ESP DSFGP AD IY D DPM+ F PS ++ E GE
Sbjct: 51 SCVSSQDDRPSVFDNPWIAEQEYPKGMVTLEKAVLKLQGSVIEKDGRYLRAEFASKGPLGESVDDVEWYFTPNDVLVQFRAERRGAGPDFGANKKRLEKMRIGLGWERVEILRNRRRALVVVESPFDSFGPGTYEADELGFSNREMVPAEANQKEIYRDVDPMAAAFRKPSGSMLEGMGE 230
BLAST of mRNA_Ecto-sp13_S_contig13268.2630.1 vs. uniprot
Match: A0A4D9CVY8_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CVY8_9STRA) HSP 1 Score: 127 bits (318), Expect = 9.400e-32 Identity = 68/135 (50.37%), Postives = 91/135 (67.41%), Query Frame = 1
Query: 85 MSRLRNYLE-FNGAKVIASSPRYLRVEFEAANAIPASVDDAEFYFTPGDALVQFRCARRNGPTDFGANRRRMDGIRQALKFESIPVLRNRKRALFFGESPIDSFGPSFGMADP-----SVIYGDADPMSPPFETP 471
M RL++Y+E GA+ I++ RYLR E + ++DD EFYFTP D+++QFR ARR D GAN++RM+ IR AL FE IPVLRNR+RALFF ESP+D +GPS+ P YGD+DP++P +E P
Sbjct: 1 MRRLKSYVESLPGAETISAEDRYLRFEIKE----DGNIDDTEFYFTPNDSIIQFRSARRGDGRDRGANQKRMEKIRIALGFEKIPVLRNRRRALFFLESPLDGWGPSYREDAPRPEDLDQAYGDSDPLAPGWEAP 131 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13268.2630.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig13268.2630.1 >prot_Ecto-sp13_S_contig13268.2630.1 ID=prot_Ecto-sp13_S_contig13268.2630.1|Name=mRNA_Ecto-sp13_S_contig13268.2630.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=201bp TPTCVSSQDDRPYPFMEPWSYDGPFERSMSRLRNYLEFNGAKVIASSPRYback to top mRNA from alignment at Ecto-sp13_S_contig13268:1773..4538- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig13268.2630.1 ID=mRNA_Ecto-sp13_S_contig13268.2630.1|Name=mRNA_Ecto-sp13_S_contig13268.2630.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2766bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13268:1773..4538- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig13268:1773..4538- >mRNA_Ecto-sp13_S_contig13268.2630.1 ID=mRNA_Ecto-sp13_S_contig13268.2630.1|Name=mRNA_Ecto-sp13_S_contig13268.2630.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=603bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13268:1773..4538- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |