mRNA_Ecto-sp13_S_contig13248.2617.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig13248.2617.1 vs. uniprot
Match: D7FT49_ECTSI (Translesion synthesis DNA polymerase eta splice variant n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT49_ECTSI) HSP 1 Score: 739 bits (1907), Expect = 3.170e-261 Identity = 392/420 (93.33%), Postives = 397/420 (94.52%), Query Frame = 1
Query: 1 NRVVEGSASSIIAVSYEARPFGVKRGMKAGDARKLCPELSLVQVPTRNGKADISLYRHAGERVVAVLERAGGTLTTVEKASIDEVYVDVTRAAHALLSSLGSHNSESGGDQXXXXXXXXXXXXXGTGTSTAEGSKAPPAASPREDGEVSQKRWEDIGEGGWTAVLSATATTHVAGLSDDDASKEQRLADGVSWWARTKEAFTQDQELLSCGAAVVSRLRVAVRSELGYSCTAGVLAHNKLLAKLCSNMHKPNAQTVLPLDKVEVVFHTLPVERVRGWGGKFGVKMMEKLGVSTAGEVAAVGAAELQRVLGDEEGWRAWEKSNAICRDPVKARSAPKSVGCSKTFPGNAKLTSFSEIERWLSELSKELISRLVEQQEGEGQTPSKLTVSFAALQQQAPRLTMLGVSAHGFADSRKDTRSIQ 1260
NRVVEGSASSIIAVSYEARPFGVKRGMKAGDARK+CPELSLVQVPTRNGKADIS YRHAGERVVAVLERAGG LTTVEKASIDEVYVDVTRAAHALLSSLGSHNSESGGDQ XXXX G G S EGSKAPPAASP EDGEVS+KRWEDIGEGGWTAVLSATATTHVAGLSDD ASKEQ+LADGVSWWART+EAFT+DQELLSCGAAVVSRLR AVRSELGYSCTAGV AHNKLLAKLCSNMHKPNAQTVLPLDKVEVVFHTLPVERVRGWGGKFGVKMMEKLGVSTAGEVAAVGAAELQRVLGDEEGWRAWEKSNAICRDPV ARSAPKSVGCSKTFPG KLTSFSEIERWLSELSKELISRLVEQQEGEGQTPSKLTVSFAALQQ APRLTMLGVSAHGFADSRKDTRSIQ
Sbjct: 91 NRVVEGSASSIIAVSYEARPFGVKRGMKAGDARKVCPELSLVQVPTRNGKADISFYRHAGERVVAVLERAGGALTTVEKASIDEVYVDVTRAAHALLSSLGSHNSESGGDQPQQHXXXXED---GKGASAEEGSKAPPAASPMEDGEVSKKRWEDIGEGGWTAVLSATATTHVAGLSDDHASKEQQLADGVSWWARTQEAFTRDQELLSCGAAVVSRLRAAVRSELGYSCTAGV-AHNKLLAKLCSNMHKPNAQTVLPLDKVEVVFHTLPVERVRGWGGKFGVKMMEKLGVSTAGEVAAVGAAELQRVLGDEEGWRAWEKSNAICRDPVNARSAPKSVGCSKTFPGKTKLTSFSEIERWLSELSKELISRLVEQQEGEGQTPSKLTVSFAALQQ-APRLTMLGVSAHGFADSRKDTRSIQ 505
BLAST of mRNA_Ecto-sp13_S_contig13248.2617.1 vs. uniprot
Match: A0A6H5LJJ9_9PHAE (UmuC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LJJ9_9PHAE) HSP 1 Score: 393 bits (1010), Expect = 7.680e-133 Identity = 216/232 (93.10%), Postives = 222/232 (95.69%), Query Frame = 1
Query: 1 NRVVEGSASSIIAVSYEARPFGVKRGMKAGDARKLCPELSLVQVPTRNGKADISLYRHAGERVVAVLERAGGTLTTVEKASIDEVYVDVTRAAHALLSSLGSHNSESGGDQXXXXXXXXXXXXXGTGTSTAEGSKAPPAASPREDGEVSQKRWEDIGEGGWTAVLSATATTHVAGLSDDDASKEQRLADGVSWWARTKEAFTQDQELLSCGAAVVSRLRVAVRSELGYSCTA 696
NRVVEGSASSIIAVSYEARPFGVKRGMKAGDARK+CPEL+LVQVPTRNGKADISLYRHAGERVVAVLERAGG LTTVEKASIDEVYVDVTRAAHALLSSLGSHNSES G XXXXXXXXXX G GTSTAEG+KAPPAASPREDG VS+KRWEDIGEGGWTAVLSATATTHVAGLSDDDASKEQ+LADGVSWWARTKEAFT+DQELLSCGAAVVSRLR AVRSELGYSCTA
Sbjct: 91 NRVVEGSASSIIAVSYEARPFGVKRGMKAGDARKVCPELALVQVPTRNGKADISLYRHAGERVVAVLERAGGALTTVEKASIDEVYVDVTRAAHALLSSLGSHNSESSGXXXXXXXXXXXX---GKGTSTAEGNKAPPAASPREDGGVSKKRWEDIGEGGWTAVLSATATTHVAGLSDDDASKEQQLADGVSWWARTKEAFTRDQELLSCGAAVVSRLRAAVRSELGYSCTA 319
BLAST of mRNA_Ecto-sp13_S_contig13248.2617.1 vs. uniprot
Match: A0A6H5K6B1_9PHAE (UmuC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6B1_9PHAE) HSP 1 Score: 340 bits (871), Expect = 3.220e-107 Identity = 181/218 (83.03%), Postives = 183/218 (83.94%), Query Frame = 1
Query: 703 LAHNKLLAKLCSNMHKPNAQTVLPLDKVEVVFHTLPVERVRGWGGKFGVKMMEKLGVSTAGEVAAVGAAELQRVLGDEEGWRAWEKSNAICRDPVKARSAPKSVGCSKTFPGNAKLTSFSEIERWLSELSKELISRLVEQQEGEGQTPSKLTVSFAALQQQ--------------------------------APRLTMLGVSAHGFADSRKDTRSIQ 1260
+AHNKLLAKLCSNMHKPNAQTVLPLDKVE VFHTLPV RVRGWGGKFGVKMMEKLGVSTAGEVAAVGAAELQRVLGDEEGWRAWEKSNAICRDPVKARSAPKSVGCSKTFPG AKLTSFSEIERWLSELSKELISRLVEQQEGEGQTPSKLTVSFAALQQ+ APRLTMLGVSAHGFADSRKDTRSIQ
Sbjct: 61 VAHNKLLAKLCSNMHKPNAQTVLPLDKVEAVFHTLPVGRVRGWGGKFGVKMMEKLGVSTAGEVAAVGAAELQRVLGDEEGWRAWEKSNAICRDPVKARSAPKSVGCSKTFPGKAKLTSFSEIERWLSELSKELISRLVEQQEGEGQTPSKLTVSFAALQQKGRSKGVSRCCRMVKPELRPVVEACMKMVRAYSAPRLTMLGVSAHGFADSRKDTRSIQ 278
BLAST of mRNA_Ecto-sp13_S_contig13248.2617.1 vs. uniprot
Match: A0A2P6TXE9_CHLSO (DNA polymerase eta isoform C n=3 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TXE9_CHLSO) HSP 1 Score: 247 bits (631), Expect = 6.020e-69 Identity = 150/391 (38.36%), Postives = 205/391 (52.43%), Query Frame = 1
Query: 1 NRVVEGSASSIIAVSYEARPFGVKRGMKAGDARKLCPELSLVQVPTRNGKADISLYRHAGERVVAVLERAGGTLTTVEKASIDEVYVDVTRAAHALLSSLGSHNSESGGDQXXXXXXXXXXXXXGTGTSTAEGSKAPPAASPREDGEVSQKRWEDIGEGGWTAVLSATATTHVAGLSDDDASKEQRLADGVSWWARTKEAFTQDQELLSCGAAVVSRLRVAVRSELGYSCTAGVLAHNKLLAKLCSNMHKPNAQTVLPLDKVEVVFHTLPVERVRGWGGKFGVKMMEKLGVSTAGEVAAVGAAELQRVLGDEEGWRAWEKSNAICRDPVKARSAPKSVGCSKTFPGNAKLTSFSEIERWLSELSKELISRLVEQQEGEGQTPSKLTVSFAA 1173
NR++ S S+IAVSYEAR GVKR M+ DARK CP++ LVQVPT +GKAD++LYR G++V+ +L R G E+ASIDE Y+D+T A L + G PP P +V HV+G AD SWW R + + LL+C AA V+ LR AVR ELGY+C+AG+ AH KL+AKLCS +HKP QTVLP V + LPV ++RG GGKFG ++ +LG++T GE+AAV L+ GD++ + + + D V+ R+ PKS+ C KTF G L S + +WL EL+ EL RL +++E + P LTV+ A+
Sbjct: 1948 NRLMNDSNGSLIAVSYEARAHGVKRNMRGDDARKACPDIQLVQVPTAHGKADLTLYRSEGKKVLQILSRLG----IAERASIDECYLDLTAEAQRRLEACGG---------------------------------VPPL--PMHPDQV-----------------------HVSGA-----------ADAASWWQRPPHEWQPGERLLACAAAAVAELRQAVREELGYTCSAGI-AHTKLMAKLCSGLHKPAQQTVLPASGVPDLLAPLPVSKLRGLGGKFGEQVCSELGITTVGELAAVPLPRLESAFGDKDAQWLYAVARGVTDDAVQERTLPKSLNCGKTFRGRTSLRSMEAVHKWLLELAGELSERLEQEREDNNRVPQLLTVNLAS 2264
BLAST of mRNA_Ecto-sp13_S_contig13248.2617.1 vs. uniprot
Match: A0A8J9S903_9CHLO (DNA polymerase eta n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9S903_9CHLO) HSP 1 Score: 239 bits (610), Expect = 1.180e-68 Identity = 149/388 (38.40%), Postives = 202/388 (52.06%), Query Frame = 1
Query: 4 RVVEGSASSIIAVSYEARPFGVKRGMKAGDARKLCPELSLVQVPTRNGKADISLYRHAGERVVAVLERAGGTLTTVEKASIDEVYVDVTRAAHALLSSLGSHNSESGGDQXXXXXXXXXXXXXGTGTSTAEGSKAPPAASPREDGEVSQKRWEDIGEGGWTAVLSATATTHVAGLSDDDASKEQRLADGVSWWARTKEAFTQDQELLSCGAAVVSRLRVAVRSELGYSCTAGVLAHNKLLAKLCSNMHKPNAQTVLPLDKVEVVFHTLPVERVRGWGGKFGVKMMEKLGVSTAGEVAAVGAAELQRVLGDEEGWRAWEKSNAICRDPVKARSAPKSVGCSKTFPGNAKLTSFSEIERWLSELSKELISRLVEQQEGEGQTPSKLTVSF 1167
R+ S S+IAV YEAR GVKRGM+ DARK CP+L+LVQVP +GKAD++LYR G++V+ +L R L+ E+ASIDE Y+D++ A +++ H PP E HV G + A++ +WW R A+ Q LL+CGAAVV+ LR AV ELG+SC+AG+ AHNK+LAKL S MHKP+ QTV+ LD V + LP+ ++R GGKFG ++M LG+ST GE+AAV L+ V G ++ S I + VK R PKS+ C KTF G+ L F + +WL EL+ EL R+ +E +TP LTV
Sbjct: 57 RIFNRSNGSLIAVGYEARAKGVKRGMRGDDARKACPDLNLVQVPVAHGKADLTLYRACGKQVLGILAR----LSIAERASIDECYLDISEEAKKRMAACSGH---------------------------------PPLPVNLEQ-------------------------VHVCGEEGEGAAE--------AWWNRPVGAWGPGQRLLACGAAVVAELRAAVSRELGFSCSAGI-AHNKILAKLASGMHKPSQQTVVTLDCVPGLMAALPISKLRQLGGKFGEEVMAALGISTVGELAAVPLRRLEAVCGQDDAMWLHRLSRGIDDEEVKERQLPKSISCGKTFRGHTALKDFPAVHKWLGELASELEERISADREENERTPGLLTVGM 373
BLAST of mRNA_Ecto-sp13_S_contig13248.2617.1 vs. uniprot
Match: I0YLK6_COCSC (DNA/RNA polymerase (Fragment) n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0YLK6_COCSC) HSP 1 Score: 231 bits (588), Expect = 1.310e-67 Identity = 149/388 (38.40%), Postives = 201/388 (51.80%), Query Frame = 1
Query: 4 RVVEGSASSIIAVSYEARPFGVKRGMKAGDARKLCPELSLVQVPTRNGKADISLYRHAGERVVAVLERAGGTLTTVEKASIDEVYVDVTRAAHALLSSLGSHNSESGGDQXXXXXXXXXXXXXGTGTSTAEGSKAPPAASPREDGEVSQKRWEDIGEGGWTAVLSATATTHVAGLSDDDASKEQRLADGVSWWARTKEAFTQDQELLSCGAAVVSRLRVAVRSELGYSCTAGVLAHNKLLAKLCSNMHKPNAQTVLPLDKVEVVFHTLPVERVRGWGGKFGVKMMEKLGVSTAGEVAAVGAAELQRVLGDEEGWRAWEKSNAICRDPVKARSAPKSVGCSKTFPGNAKLTSFSEIERWLSELSKELISRLVEQQEGEGQTPSKLTVSF 1167
R+ S S+IAV YEAR GVKRGM+ DARK+CP+L+LVQVP +GKAD++LYR +G++V+ +L R L+ E+ASIDE Y+D+T A L++ +H PP P GEV GEGG A WW R A+ Q LL+CGAAVV+ LR AVR ELGYSC+AG+ AHNK+LAKL S MHKP+ QT++ LD V + LP+ ++R GGKFG ++M L ++T GE++AV L+ V + S I + VK R P+S+ C KTF G+ L +F + +WL EL EL R+ + + P LTV
Sbjct: 21 RIFNSSNGSLIAVGYEARAKGVKRGMRGDDARKVCPDLNLVQVPVAHGKADLTLYRASGKQVLNILAR----LSVAERASIDECYLDITEEAKRRLAASSAH---------------------------------PPL--PINVGEVH-------GEGGTEA-----------------------------WWHRPVGAWGPGQRLLACGAAVVAELRAAVRRELGYSCSAGI-AHNKILAKLASGMHKPSQQTLVTLDCVPGLMAGLPIPKLRQLGGKFGEEIMTALNITTVGELSAVPLRRLEAVCSQADALWLHRLSRGIDDEEVKERQLPQSISCGKTFRGHTALKAFPAVHKWLGELGDELEERITADRADNERVPRLLTVGM 332
BLAST of mRNA_Ecto-sp13_S_contig13248.2617.1 vs. uniprot
Match: A0A7S0DPR3_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0DPR3_9EUKA) HSP 1 Score: 234 bits (596), Expect = 2.600e-66 Identity = 157/404 (38.86%), Postives = 221/404 (54.70%), Query Frame = 1
Query: 1 NRVVEGSASSIIAVSYEARPFGVKRGMKAGDARKLCPELSLVQVPTRNGKADISLYRHAGERVVAVLERAGGTLTTVEKASIDEVYVDVTRAAHALLSSLGSHNSESGGDQXXXXXXXXXXXXXGTGTSTAEGSKAPPAASPREDGEVSQKRWEDIGEGGWTAVLSATATTHVAGLSD--------DDASK-------EQRLADGVSWWARTKEAFTQDQELLSCGAAVVSRLRVAVRSELGYSCTAGVLAHNKLLAKLCSNMHKPNAQTVLPLDKVEVVFHTLPVERVRGWGGKFGVKMMEKLGVSTAGEVAAVGAAELQRVLGDEEGWRAWEKSNAICRDPVKARSAPKSVGCSKTFPGNAKLTSFSEIERWLSELSKELISRLVEQQEGEGQTPSKLTVSF 1167
NRVV G+ S IIAVSYEAR FG+KRGM+A ARKL PEL VQVPT GK+ + +YR G V VL ++GG L E+ S+DEVY+DV+++A +LL S + N + ++ AEG + ++S G+ + A+L + HVAGLSD D SK EQ L ++WW R ++ + + LL GA VV RLR VR E ++C+AG+ AHNKLL+KL S +HKPN+QTV+PL V + LP+ R+RG GGK G ++ E L V++ GE+A V A L R+ GD W+ S I + VK R PKS+ K F ++ S E W+ L ++L SR++ + P+KL+++
Sbjct: 42 NRVVNGNGS-IIAVSYEARTFGIKRGMRADQARKLFPELVTVQVPTNFGKSQLGIYRDCGAEVARVL-KSGGPL---ERGSVDEVYLDVSKSAKSLLRSANALNDQLWEEK-------------------AEGPEL----------KISPLSGWRCGDERFLALLDEAKSGHVAGLSDEKTHQYSKDQVSKGVNKNTSEQSLT-SLNWWERPRDCWIYSERLLVAGAVVVGRLRDRVRRECNFTCSAGI-AHNKLLSKLASAIHKPNSQTVVPLSCVYDLLRPLPIARIRGLGGKIGRQLQEDLNVTSIGELAMVPMASLVRLFGDRMAIWIWQASRGIDGEEVKDRILPKSLVTGKGFSKGREIHSIGEATHWVYRLCEDLHSRILLDSTRYQRIPTKLSLAI 409
BLAST of mRNA_Ecto-sp13_S_contig13248.2617.1 vs. uniprot
Match: A0A835YI13_9STRA (UmuC domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YI13_9STRA) HSP 1 Score: 236 bits (601), Expect = 3.110e-66 Identity = 152/386 (39.38%), Postives = 215/386 (55.70%), Query Frame = 1
Query: 4 RVVEGSASSIIAVSYEARPFGVKRGMKAGDARKLCPELSLVQVPTRNGKADISLYRHAGERVVAVLERAGGTLTTVEKASIDEVYVDVTRAAHALLSSLGSHNSESGGDQXXXXXXXXXXXXXGTGTSTAEGSKAPPAASPREDGEVSQKRWEDIGEGGWTAVLSATATTHVAGLSDDDASKEQRLADGVSWWARTKEAFTQDQELLSCGAAVVSRLRVAVRSELGYSCTAGVLAHNKLLAKLCSNMHKPNAQTVLPLDKVEVVFHTLPVERVRGWGGKFGVKMMEKLGVSTAGEVAAVGAAELQRVLGDEEGWRAWEKSNAICRDPVKARSAPKSVGCSKTFPGNAKLTSFSEIERWLSELSKELISRLVEQQEGEGQTPSKLTV 1161
R V S S IIAVSYEAR GVKR M +ARK+CP++ LV VPT +GKAD++LYR+AG RVV VL GT VE+AS+DE YVDVT A LL+ L + ++ G ED +S+ +G+ TA+ T G+ + + WW R +T+D+ LL+CGAAVV+RLR V +LGY+C+ G+ AHNK +AKL S +HKP QTV+P +V + LP+ER+RG GGK G ++ L V+TAGE+AA+ A L+R+ G+++ + + + PV R+ KSV C KTF GN+ + + ++RWL EL+ E+ RL Q+ + ++LTV
Sbjct: 33 RYVTTSRSGIIAVSYEARERGVKRNMTGQEARKICPDIQLVTVPTAHGKADLTLYRNAGARVVDVL----GTGGLVERASVDEAYVDVTAEASRLLA-LACKDPKAWGHVV-------------------------------EDAGISKVA--GLGDKAATALSRDLVRTGHCGVKAEALGPAEAA---TVWWGRPLHEWTKDERLLACGAAVVTRLRDMVTKKLGYTCSGGI-AHNKSMAKLASGLHKPKQQTVVPASQVAGLMEGLPLERIRGLGGKLGEQVRSDLKVTTAGELAAMPEATLRRLYGEKQAALLADMARGVDLTPVVQRALSKSVSCGKTFYGNSCIRTEETLKRWLLELAAEIQERLDAQRADHKRAATRLTV 376
BLAST of mRNA_Ecto-sp13_S_contig13248.2617.1 vs. uniprot
Match: A0A2P6V1H9_9CHLO (DNA polymerase eta isoform A n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6V1H9_9CHLO) HSP 1 Score: 226 bits (577), Expect = 2.810e-62 Identity = 149/388 (38.40%), Postives = 194/388 (50.00%), Query Frame = 1
Query: 10 VEGSASSIIAVSYEARPFGVKRGMKAGDARKLCPELSLVQVPTRNGKADISLYRHAGERVVAVLERAGGTLTTVEKASIDEVYVDVTRAAHALLSSLGSHNSESGGDQXXXXXXXXXXXXXGTGTSTAEGSKAPPAASPREDGEVSQKRWEDIGEGGWTAVLSATATTHVAGLSDDDASKEQRLADGVSWWARTKEAFTQDQELLSCGAAVVSRLRVAVRSELGYSCTAGVLAHNKLLAKLCSNMHKPNAQTVLPLDKVEVVFHTLPVERVRGWGGKFGVKMMEKLGVSTAGEVAAVGAAELQRVLGDEEGWRAWEKSNAICRDPVKARSAPKSVGCSKTFPGNAKLTSFSEIERWLSELSKELISRLVEQQEGEGQTPSKLTVSFAA 1173
+ S S+IAVSYEAR GV R M+ +AR CPE++LVQVPT +GKAD++LYR G+RV+ +L R L E+ASIDE Y+D+T A L AEG PP E V +L T+ A +WW R EA+ + LL+ AAVV+ LR AV+ ELGYSC+AGV AH KLLAKLCS +HKP QTVLP V + LP+ ++RG GGKFG +M +LG+ T G++AA A L+ G++E + + D V+ R KSV C KTF G L + WL EL EL RL +E + P LTV+FA+
Sbjct: 1 MNASNGSLIAVSYEARAAGVTRNMRGNEARAACPEINLVQVPTAHGKADLTLYRAEGKRVLDILAR----LARTERASIDECYLDLTEEAQRRL---------------------------------AEGGGVPPPPLHPEQVHV---------------MLEGTS------------------AGAAAWWHRPDEAWGPGERLLAAAAAVVADLREAVQRELGYSCSAGV-AHTKLLAKLCSGLHKPAQQTVLPAAAVPALLVPLPIPKLRGLGGKFGETVMSELGIETVGQLAATPFARLEAAFGEKEARWLAGLAVGVTDDAVEERKLAKSVSCGKTFRGRHALRDLDAVRSWLLELGGELSERLEADREANNRVPQLLTVNFAS 317
BLAST of mRNA_Ecto-sp13_S_contig13248.2617.1 vs. uniprot
Match: A0A3S3MRQ9_9MAGN (DNA polymerase eta isoform X1 n=1 Tax=Cinnamomum micranthum f. kanehirae TaxID=337451 RepID=A0A3S3MRQ9_9MAGN) HSP 1 Score: 221 bits (563), Expect = 2.840e-62 Identity = 139/361 (38.50%), Postives = 194/361 (53.74%), Query Frame = 1
Query: 31 IIAVSYEARPFGVKRGMKAGDARKLCPELSLVQVPTRNGKADISLYRHAGERVVAVLERAGGTLTTVEKASIDEVYVDVTRAAHALLSSLGSHNSESGGDQXXXXXXXXXXXXXGTGTSTAEGSKAPPAASPREDGEVSQKRWEDIGEGGWTAVLSATATTHVAGLSDDDASKEQRLADGVSWWARTKEAFTQDQELLSCGAAVVSRLRVAVRSELGYSCTAGVLAHNKLLAKLCSNMHKPNAQTVLPLDKVEVVFHTLPVERVRGWGGKFGVKMMEKLGVSTAGEVAAVGAAELQRVLGDEEGWRAWEKSNAICRDPVKARSAPKSVGCSKTFPGNAKLTSFSEIERWLSELSKELISRL 1113
+IAVSYEAR FGVKR M+ DA+K+CP + L+QVP GKAD++LYR+AG VV++L R G E+ASIDEVY+D+T AA ++LS + PP D EV + +H+ GL++D + K+ V W +A QD+ LL+CGA +V+ LR+ V E ++C+AG+ AHNK+LAKL S MHKP QTV+P V+ + +LPV++++ GGK G + LGV+T G++ +LQ G G W + I D V+ R PKS GC KTFPG L + + +E WL+ELS+EL RL
Sbjct: 79 LIAVSYEARKFGVKRSMRGDDAKKVCPNIQLIQVPVARGKADLNLYRNAGSEVVSILSRKG----RCERASIDEVYLDLTDAAESMLS------------------------------------ENPPEILEVLDEEVLK--------------------SHILGLTEDQSDKKT-----VKEWLCRSDADHQDK-LLACGAIIVAELRMDVLKETIFTCSAGI-AHNKMLAKLASAMHKPAQQTVVPSSSVQDLLASLPVKKMKQLGGKLGSSLQSDLGVTTVGDLLQFSEGKLQDRYGVNTGTWLWNIARGISGDEVEGRLLPKSHGCGKTFPGPKALKTIASVEHWLNELSEELNERL 372 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13248.2617.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig13248.2617.1 >prot_Ecto-sp13_S_contig13248.2617.1 ID=prot_Ecto-sp13_S_contig13248.2617.1|Name=mRNA_Ecto-sp13_S_contig13248.2617.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=420bp NRVVEGSASSIIAVSYEARPFGVKRGMKAGDARKLCPELSLVQVPTRNGKback to top mRNA from alignment at Ecto-sp13_S_contig13248:3..4779- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig13248.2617.1 ID=mRNA_Ecto-sp13_S_contig13248.2617.1|Name=mRNA_Ecto-sp13_S_contig13248.2617.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4777bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13248:3..4779- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig13248:3..4779- >mRNA_Ecto-sp13_S_contig13248.2617.1 ID=mRNA_Ecto-sp13_S_contig13248.2617.1|Name=mRNA_Ecto-sp13_S_contig13248.2617.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1260bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13248:3..4779- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |