mRNA_Ecto-sp13_S_contig13245.2615.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig13245.2615.1 vs. uniprot
Match: D7FSI9_ECTSI (Villin villin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSI9_ECTSI) HSP 1 Score: 488 bits (1256), Expect = 6.600e-164 Identity = 252/261 (96.55%), Postives = 256/261 (98.08%), Query Frame = 2
Query: 434 MVLDHGDVSGRTVTTVGEGSEPEAFWDALGGMGEYPKSSEAEEVSQEPRLFQVSNATGKLAVTPVCNFDQSDLCADDVMLLDTVSSVFVWVGPQANETERSESMNVAQQYINTASDGRSPDTPVLQVAAGNEPPLFTQHFRGWDPLLTDKNTFVDPYQAKLAAAKEEEAKMEAKHAEAPGTITMDDLPAPPANGAXXXXXXXXSTASRDITPPSARMTVPYAELKGYGTEVDGVDPSCREQYLDDEEFVEVFGMSKADFAK 1216
MVLDHGDVSGRTV+TV EGSEPEAFWDALGGMGEYPK SEAEEVSQEPRLFQVSNATGKLAVTPVCNFDQSDLC DDVMLLDTVSSVFVWVGPQANETERSESMNVAQQYINTASDGRSPDTPVLQVAAGNEPPLFTQHFRGWDPLLTDKNTFVDPYQAKLAAAKEEEA+MEAK+AEAPGTITMDDLPAPPANGAXXXXXXXX TASRDITPPSA MTVPYAELKGYGTEVDGVDPSCREQYLDD+EFVEVFGMSKADFAK
Sbjct: 500 MVLDHGDVSGRTVSTVEEGSEPEAFWDALGGMGEYPKLSEAEEVSQEPRLFQVSNATGKLAVTPVCNFDQSDLCVDDVMLLDTVSSVFVWVGPQANETERSESMNVAQQYINTASDGRSPDTPVLQVAAGNEPPLFTQHFRGWDPLLTDKNTFVDPYQAKLAAAKEEEAQMEAKYAEAPGTITMDDLPAPPANGAXXXXXXXXXTASRDITPPSANMTVPYAELKGYGTEVDGVDPSCREQYLDDKEFVEVFGMSKADFAK 760
BLAST of mRNA_Ecto-sp13_S_contig13245.2615.1 vs. uniprot
Match: A0A6H5JVG7_9PHAE (HP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVG7_9PHAE) HSP 1 Score: 477 bits (1228), Expect = 7.200e-163 Identity = 253/279 (90.68%), Postives = 257/279 (92.11%), Query Frame = 2
Query: 434 MVLDHGDVSGRTVTTVGEGSEPEAFWDALGGMGEYPKSSEAEEVSQEPRLFQVSNATGKLAVTPVCNFDQSDLCADDVMLLDTVSSVFVWVGPQANETERSE------------------SMNVAQQYINTASDGRSPDTPVLQVAAGNEPPLFTQHFRGWDPLLTDKNTFVDPYQAKLAAAKEEEAKMEAKHAEAPGTITMDDLPAPPANGAXXXXXXXXSTASRDITPPSARMTVPYAELKGYGTEVDGVDPSCREQYLDDEEFVEVFGMSKADFAK 1216
MVLDHG VSGRTV+TV EGSEPEAFWDALGGMGEYPK SEAEEVSQEPRLFQVSNATGKLAVTPVCNFDQSDLCADDVMLLDTVSSVFVWVGPQANETERSE SMNVAQQYINTASDGRSPDTPVLQVAAGNEPPLFTQHFRGWDPLLTDKNTFVDPYQAKLAAAKEEEAKMEAK+AEAPGTIT+DDLPAPPANGAXXXXXXXXSTASRDITPPSA MTVPYAELKGYGTEVDGVDPSCREQYLDD+EFVEVFGMSKADFAK
Sbjct: 247 MVLDHGGVSGRTVSTVEEGSEPEAFWDALGGMGEYPKLSEAEEVSQEPRLFQVSNATGKLAVTPVCNFDQSDLCADDVMLLDTVSSVFVWVGPQANETERSEVCTSTRPQPGHTPYSAEQSMNVAQQYINTASDGRSPDTPVLQVAAGNEPPLFTQHFRGWDPLLTDKNTFVDPYQAKLAAAKEEEAKMEAKYAEAPGTITLDDLPAPPANGAXXXXXXXXSTASRDITPPSAGMTVPYAELKGYGTEVDGVDPSCREQYLDDKEFVEVFGMSKADFAK 525
BLAST of mRNA_Ecto-sp13_S_contig13245.2615.1 vs. uniprot
Match: A0A835YLA3_9STRA (Villin-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLA3_9STRA) HSP 1 Score: 206 bits (523), Expect = 2.280e-55 Identity = 98/179 (54.75%), Postives = 126/179 (70.39%), Query Frame = 2
Query: 458 SGRTVTTVGEGSEPEAFWDALGGMGEYPKSSEAEEVSQEPRLFQVSNATGKLAVTPVCNFDQSDLCADDVMLLDTVSSVFVWVGPQANETERSESMNVAQQYINTASDGRSPDTPVLQVAAGNEPPLFTQHFRGWDPLLTDKNTFVDPYQAKLAAAKEEEAKMEAKHAEAPGTITMDDL 994
S R TV EG EP AFW+ALGG GEY +++EAE Q PRLFQ+SNATG + V+ V NFDQSDLC DDVMLLDT + VFVW+G +N TE++ ++++A+ Y+++A+DGR TP+ +VA G+EP LFTQHFRGWD L FVDPY+AKL A +E +A G ITMD +
Sbjct: 534 SKRETVTVAEGDEPAAFWEALGGQGEYAEAAEAEPSPQPPRLFQISNATGTMRVSEVANFDQSDLCVDDVMLLDTFTQVFVWIGTSSNPTEQNAAVDIAKAYVDSATDGRPSGTPIARVACGSEPALFTQHFRGWDAGLLSSQAFVDPYEAKLQALREADAAAXXXXXXXEGAITMDSI 712
BLAST of mRNA_Ecto-sp13_S_contig13245.2615.1 vs. uniprot
Match: A0A835YKP2_9STRA (Villin n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKP2_9STRA) HSP 1 Score: 197 bits (500), Expect = 1.730e-52 Identity = 91/160 (56.88%), Postives = 120/160 (75.00%), Query Frame = 2
Query: 437 VLDHGDVSGRTVTTVGEGSEPEAFWDALGGMGEYPKSSEAEEVSQEPRLFQVSNATGKLAVTPVCNFDQSDLCADDVMLLDTVSSVFVWVGPQANETERSESMNVAQQYINTASDGRSPDTPVLQVAAGNEPPLFTQHFRGWDPLLTDKNTFVDPYQAKL 916
+L + SGR + EG E FWDALGG G Y +++E+EEV+Q PR+FQ+SNATG + V V NFDQSDLC DDVMLLD ++ V+VWVG +N E+ E+M++A+ YI TA+DGRS DTP+++V AG+EPP+FTQHFRGWD L K FVDP++AK+
Sbjct: 588 LLTYKGASGRDFVAIQEGEETPEFWDALGGEGPYLEAAESEEVAQAPRMFQISNATGAMTVEEVPNFDQSDLCNDDVMLLDCLNEVYVWVGGGSNAQEQREAMDIAKAYIETATDGRSRDTPIVRVTAGSEPPMFTQHFRGWDADLMSKRNFVDPFEAKV 747
BLAST of mRNA_Ecto-sp13_S_contig13245.2615.1 vs. uniprot
Match: A0A7S2D1R4_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2D1R4_9STRA) HSP 1 Score: 190 bits (482), Expect = 1.760e-51 Identity = 110/247 (44.53%), Postives = 147/247 (59.51%), Query Frame = 2
Query: 464 RTVTTVGEGSEPEAFWDALGGMGEYPKSSEAEEVSQEPRLFQVSNATGKLAVTPVCNFDQSDLCADDVMLLDTVSSVFVWVGPQANETERSESMNVAQQYINTASDGRSPDTPVLQVAAGNEPPLFTQHFRGWDPLLTDKNTFVDPYQAKLAAAKEEEAKMEAKHAEAPGTITMDDLPAPPANGAXXXXXXXXSTASRDITPPSARMTVPYAELKGYGTEVDGVDPSCREQYLDDEEFVEVFGMSKA 1204
R + TV EG EP+AFW+ALGG GEYPK + E V +PRLFQ SNA G V VC+FDQ DL DDV LLD ++++ W+G AN ER +++ AQ+Y A+DGR PD P+++V EP +FTQ F GWD + KN FVDPY+AKLAA + A AEA +D PAP + + A P S + ++ AEL+ GT +GVDP+ +E+YL D +F+E F + A
Sbjct: 286 RELVTVAEGEEPDAFWEALGGKGEYPKQAPGEPVPSDPRLFQCSNAFGSFVVEEVCSFDQEDLLEDDVYLLDVGTTLYAWIGGGANADERRLAIDTAQKYNAAATDGRDPDIPIIEVIQNREPLMFTQFFAGWDGEMWTKNVFVDPYEAKLAAQRAAAA------AEA-----GEDAPAPMLSQKSMSSAQLLNPAG-GFKPTSEKFSL--AELQA-GTP-EGVDPTKKEEYLSDADFLEAFKVDMA 516
BLAST of mRNA_Ecto-sp13_S_contig13245.2615.1 vs. uniprot
Match: A0A7S2RPG3_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RPG3_9STRA) HSP 1 Score: 192 bits (488), Expect = 1.100e-50 Identity = 111/251 (44.22%), Postives = 140/251 (55.78%), Query Frame = 2
Query: 464 RTVTTVGEGSEPEAFWDALGGMGEYPKSSEAEEVSQEPRLFQVSNATGKLAVTPVCNFDQSDLCADDVMLLDTVSSVFVWVGPQANETERSESMNVAQQYINTASDGRSPDTPVLQVAAGNEPPLFTQHFRGWDPLLTDKNTFVDPYQAKLAAAKEEEAKMEAKHAEAPGTITMDDLPAPPANGAXXXXXXXXSTASRDITPPSARMTVPYAELKGYGTEVDGVDPSCREQYLDDEEFVEVFGMSKADFAK 1216
R +V EGSE E FW LGG EY + EPRLF +NA G V V NF Q D+ DDVM+LD ++V+ W+G N E+S++M AQ+Y TA DGR PD P+++V AG+EP LFTQ F GWDP +KN FVDPY+AKLAA + E+A P + PA P A ST+++ PYA+L DGVDP+ +EQYLDD EF FGMS A+F K
Sbjct: 587 REFVSVAEGSEDEEFWGYLGGKCEYAQQPPDMPAPSEPRLFHCTNAYGSFQVEEVVNFTQEDMLDDDVMILDVGTTVYNWIGSGCNAEEKSKAMETAQEYNRTAQDGRDPDIPIVEVKAGSEPLLFTQFFPGWDPAFAEKNKFVDPYEAKLAAMRAEKAAAGGAEEPMPEPVK----PAAPGAPALNPSGGFSSTSTK----------FPYADLSSGCP--DGVDPTKKEQYLDDGEFQAKFGMSLAEFDK 821
BLAST of mRNA_Ecto-sp13_S_contig13245.2615.1 vs. uniprot
Match: A0A5D6XQ13_9STRA (HP domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XQ13_9STRA) HSP 1 Score: 187 bits (474), Expect = 8.530e-49 Identity = 107/251 (42.63%), Postives = 144/251 (57.37%), Query Frame = 2
Query: 464 RTVTTVGEGSEPEAFWDALGGMGEYPKSSEAEEVSQEPRLFQVSNATGKLAVTPVCNFDQSDLCADDVMLLDTVSSVFVWVGPQANETERSESMNVAQQYINTA-SDGRSPDTPVLQVAAGNEPPLFTQHFRGWDPLLTDKNTFVDPYQAKLAAAKEEEAKMEAKHAEAPGTITMDDLPAPPANGAXXXXXXXXSTASRDITPPSARMTVPYAELKGYGTEVDGVDPSCREQYLDDEEFVEVFGMSKADFA 1213
R V V EGSE +AFWD LGG G Y K+ EV PRLF SNA G + +F Q DL DDV LLDT +S+++W+G ANE E+ E++ +A +Y++ A SDGR TPV+ V NEPP+FT +F WDP +N FVDPY+A+L KEE+ K K +A GT++ + +PPA A + + T Y +L VDG+D +E+YL D EF+EV G +KA+FA
Sbjct: 571 RAVEVVAEGSESDAFWDFLGGKGPYAKTKGEVEVPHPPRLFHCSNAYGYFHAEEIFSFAQDDLNVDDVFLLDTYTSLYIWIGDGANEAEKREAVQLADEYLSLAKSDGREDGTPVISVHCRNEPPMFTSNFLAWDPAFFAQNEFVDPYEARLKKLKEEKEKNRPK--DAVGTVSSEAFRSPPAAAAAPPAPVKAAGGKGE--------TFSYEQLVAG---VDGIDIVNKERYLSDAEFLEVMGSTKAEFA 808
BLAST of mRNA_Ecto-sp13_S_contig13245.2615.1 vs. uniprot
Match: A0A8K1CGN4_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CGN4_PYTOL) HSP 1 Score: 179 bits (453), Expect = 6.570e-46 Identity = 104/252 (41.27%), Postives = 145/252 (57.54%), Query Frame = 2
Query: 464 RTVTTVGEGSEPEAFWDALGGMGEYPKSSEAEEVSQEPRLFQVSNATGKLAVTPVCNFDQSDLCADDVMLLDTVSSVFVWVGPQANETERSESMNVAQQYINTA-SDGRSPDTPVLQVAAGNEPPLFTQHFRGWDPLLTDKNTFVDPYQAKLAAAKEEEAKMEAKHAEAPGTITMDDLPAPPANGAXXXXXXXXSTASRDITPPSARMTVPYAELKGYGTEVDGVDPSCREQYLDDEEFVEVFGMSKADFAK 1216
R+ TV EGSE FWD LGG YPK E +PRLF SN+ G + +F Q DL DDV LLDT +S+++W+G ANE+E+ E++ +A +Y++ A SDGR TPV+ V GNEPP+FT +F WD +++ FVDPY+A+L K E+ K + K +A GTIT + + A TA I SA+ T Y +L V+G+D + RE YL D EF ++FG +K +F+K
Sbjct: 582 RSSVTVAEGSESGEFWDFLGGKANYPKEKTGFECPHQPRLFHCSNSYGYFNAEEIFDFAQDDLNVDDVFLLDTYTSLYIWIGTGANESEKREALKLADEYLSVAKSDGRGDGTPVITVHCGNEPPMFTSNFLAWDKAFFEQSEFVDPYEARLRKLKAEKEKNQPK--DAVGTITSESIGVTAA-----------PTAPAPIAAGSAK-TFTYEQLLAG---VEGIDLTSREVYLSDAEFEKLFGATKDEFSK 816
BLAST of mRNA_Ecto-sp13_S_contig13245.2615.1 vs. uniprot
Match: A0A7S3M9U8_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M9U8_9STRA) HSP 1 Score: 173 bits (439), Expect = 1.870e-45 Identity = 110/256 (42.97%), Postives = 144/256 (56.25%), Query Frame = 2
Query: 461 GRTVTTVGEGSEPEAFWDALGGMGEYPKSSEAEEVSQEPRLFQVSNATGKLAVTPVCNFDQSDLCADDVMLLDTVSSVFVWVGPQANETERSESMNVAQQYINTASDGRSPDTPVLQVAAGNEPPLFTQHFRGWDPLLTDKNTFVDPYQAKLAAAKEEEAKMEAKHAEAPGTITMDDLPAPPANGAXXXXXXXXSTASRDITPPSARMTVPYA------ELKGYGTEVDGVDPSCREQYLDDEEFVEVFGMSKADF 1210
GR V T+ EGSEP FW+ALGG +YP S+E E V ++ RLF S ATG V V NFDQSDL +DV LLDT + +FVWVG Q+ + E+ +S+ A QY+ +A DGR D P+++V AG EP +F+ HF+GWD K F DPYQA+L A + + A E T + PPA A XXXXX SA P +LK G GVDP+ +E+YLD+ F +F + +A F
Sbjct: 250 GREVVTLQEGSEPAEFWEALGGQADYPSSAEGEVVPRDARLFAASTATGTFRVEEVDNFDQSDLNDEDVYLLDTYTQLFVWVGSQSTQQEKEQSLAFAAQYVASADDGRDADIPIIRVTAGEEPRMFSAHFQGWDAEYFTKRAFKDPYQARLEALAATKKQTAAPAVELKKTNSF----KPPAAAAPAPXXXXXXXXXXXXXX-SAVYAAPVPGSFSLDDLKN-GLPA-GVDPTQKEEYLDNATFTSLFNVDRAAF 498
BLAST of mRNA_Ecto-sp13_S_contig13245.2615.1 vs. uniprot
Match: A0A5A8E3V1_CAFRO (HP domain-containing protein n=4 Tax=Sar TaxID=2698737 RepID=A0A5A8E3V1_CAFRO) HSP 1 Score: 175 bits (443), Expect = 2.030e-44 Identity = 85/167 (50.90%), Postives = 111/167 (66.47%), Query Frame = 2
Query: 455 VSGRTVTTVGEGSEPEAFWDALGGMGEYPKSSEAEEVSQEPRLFQVSNATGKLAVTPVCNFDQSDLCADDVMLLDTVSSVFVWVGPQANETERSESMNVAQQYINTASDGRSPDTPVLQVAAGNEPPLFTQHFRGWDPLLTDKNTFVDPYQAKLAAAKEEEAKMEAK 955
++G VT V EGSE E FW+ALGG +YP+S Q PRLFQVS TG L V VCNF Q DL DDVM+LDT + +FVW+GP ANETER+ + +A++Y+ A R P+ P++++AAG+E P+FT +F+GW+ TF DPYQAKL +EEE AK
Sbjct: 570 MTGSEVTVVEEGSEEEEFWEALGGKDDYPESLPGPPPPQPPRLFQVSTETGSLRVDEVCNFCQDDLLEDDVMMLDTFNQIFVWIGPGANETERTRAKAIAKEYLEAAGPSRDPEIPIIEMAAGSETPMFTSNFQGWETAKA--KTFPDPYQAKLERIREEEEARRAK 734 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13245.2615.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig13245.2615.1 >prot_Ecto-sp13_S_contig13245.2615.1 ID=prot_Ecto-sp13_S_contig13245.2615.1|Name=mRNA_Ecto-sp13_S_contig13245.2615.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=261bp MVLDHGDVSGRTVTTVGEGSEPEAFWDALGGMGEYPKSSEAEEVSQEPRLback to top mRNA from alignment at Ecto-sp13_S_contig13245:3..4782+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig13245.2615.1 ID=mRNA_Ecto-sp13_S_contig13245.2615.1|Name=mRNA_Ecto-sp13_S_contig13245.2615.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4780bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13245:3..4782+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig13245:3..4782+ >mRNA_Ecto-sp13_S_contig13245.2615.1 ID=mRNA_Ecto-sp13_S_contig13245.2615.1|Name=mRNA_Ecto-sp13_S_contig13245.2615.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=783bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13245:3..4782+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |