mRNA_Ecto-sp13_S_contig13244.2614.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig13244.2614.1 vs. uniprot
Match: D8LBA7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBA7_ECTSI) HSP 1 Score: 546 bits (1408), Expect = 3.520e-190 Identity = 337/356 (94.66%), Postives = 339/356 (95.22%), Query Frame = 1
Query: 241 PAAKPCLLLDLEKKPLLKVFVFLNAGEVLRAAQVCRPMFRKVDLMFGIGSQAVSAEPTPPAPXXXXXXXXXIVTGGGAPAGARDRAGSAXXXXXXSTGAPGNRLGQRALASALGVVASRVEAVTAGASSGFGSLAGAAATLXXXXXXXXXXXXXXXXXXXGMSPELMDDLSKRLTTVEMKGIIQLTERGRRMEARAGALQAEKEDLFARLQGTESVKEFLVXXXKDTEAALKRSLDEKGLTLRQSASDQEVISFLDSRTQEMERVAQETMDKAMTYQTELENQKASGQKQTKVLEDMLRFEKQRGEAGEAAFKAQKKLLVAEVKKLRTTNLALKAECDDLRQQLKDLRTSVSQLGR 1308
PA KPCLLLDLEKKPLLKVFVFLNAGEVLRAAQVCRPMFRKVDLMFGIGSQAVSAEPTPPA XXX I+TGGGAPAGARDRAGSA STGAPGNRLGQRALASALGVVASRVEAVTAGASSGFGSLAGAAATLXXXXXXXXXXXXXXXXXX MSPELMDDLSKRLTTVEMKGIIQLTERGRRMEARAGALQAEKEDLFARLQGTESVKEFLVXXXKDTEAALKRSLDEKGLTLRQSASDQEVISFLDSRTQEMERVAQETMDKAMTYQTELE+QKASGQKQTKVLEDMLRFEKQRGEAGEAAFKAQKKLLV EVKKLRTTNLALKAECDDLRQQLKDLRTSVSQLGR
Sbjct: 151 PAVKPCLLLDLEKKPLLKVFVFLNAGEVLRAAQVCRPMFRKVDLMFGIGSQAVSAEPTPPAAPXXXSAAAGIITGGGAPAGARDRAGSAASASSASTGAPGNRLGQRALASALGVVASRVEAVTAGASSGFGSLAGAAATLXXXXXXXXXXXXXXXXXX--MSPELMDDLSKRLTTVEMKGIIQLTERGRRMEARAGALQAEKEDLFARLQGTESVKEFLVXXXKDTEAALKRSLDEKGLTLRQSASDQEVISFLDSRTQEMERVAQETMDKAMTYQTELEDQKASGQKQTKVLEDMLRFEKQRGEAGEAAFKAQKKLLVTEVKKLRTTNLALKAECDDLRQQLKDLRTSVSQLGR 504
BLAST of mRNA_Ecto-sp13_S_contig13244.2614.1 vs. uniprot
Match: A0A6H5KPJ1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPJ1_9PHAE) HSP 1 Score: 462 bits (1190), Expect = 2.310e-156 Identity = 284/315 (90.16%), Postives = 285/315 (90.48%), Query Frame = 1
Query: 364 VDLMFGIGSQAVSAEPTPPAPXXXXXXXXXIVTGGGAPAGARDRAGSAXXXXXXSTGAPGNRLGQRALASALGVVASRVEAVTAGASSGFGSLAGAAATLXXXXXXXXXXXXXXXXXXXGMSPELMDDLSKRLTTVEMKGIIQLTERGRRMEARAGALQAEKEDLFARLQGTESVKEFLVXXXKDTEAALKRSLDEKGLTLRQSASDQEVISFLDSRTQEMERVAQETMDKAMTYQTELENQKASGQKQTKVLEDMLRFEKQRGEAGEAAFKAQKKLLVAEVKKLRTTNLALKAECDDLRQQLKDLRTSVSQLGR 1308
VDLMFGIGSQAVSAEPTPPA XXX I+TGGGAPAGARDRAGSA STGAPGNRLGQRALASALGVVASRVEAVTAGASSGFGSLAGAAATL XXXXXXX MSPELMDDLSKRLTTVEMKGIIQLTERGRRMEARAGALQAEKEDLFARLQGTESVKEFL XXXKDTEAALKRSLDEKGLTLRQSASDQEVISFLDSRTQEMERVAQETMDKAMTYQTELENQKAS QKQTKVLEDMLRFEKQRGEAGEAAFKAQKKLLV EVKKLRTTNLALKAECDDLRQQLKDLR SVSQLGR
Sbjct: 245 VDLMFGIGSQAVSAEPTPPAAPXXXSAAAGIITGGGAPAGARDRAGSAASASSASTGAPGNRLGQRALASALGVVASRVEAVTAGASSGFGSLAGAAATLTGAGDGGSGPVGXXXXXXX-MSPELMDDLSKRLTTVEMKGIIQLTERGRRMEARAGALQAEKEDLFARLQGTESVKEFLXXXXKDTEAALKRSLDEKGLTLRQSASDQEVISFLDSRTQEMERVAQETMDKAMTYQTELENQKASAQKQTKVLEDMLRFEKQRGEAGEAAFKAQKKLLVTEVKKLRTTNLALKAECDDLRQQLKDLRISVSQLGR 558
BLAST of mRNA_Ecto-sp13_S_contig13244.2614.1 vs. uniprot
Match: A0A7S1YZD9_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1YZD9_TRICV) HSP 1 Score: 125 bits (314), Expect = 2.420e-27 Identity = 78/196 (39.80%), Postives = 119/196 (60.71%), Query Frame = 1
Query: 721 GMSPELMDDLSKRLTTVEMKGIIQLTERGRRMEARAGALQAEKEDLFARLQGTESVKEFLVXXXKDTEAALKRSLDEKGLTLRQSASDQEVISFLDSRTQEMERVAQETMDKAMTYQTELENQKASGQKQTKVLEDMLRFEKQRGEAGEAAFKAQKKLLVAEVKKLRTTNLALKAECDDLRQQLKDLRTSVSQLGR 1308
G++ + ++ +LT E+ II + R R+ E + G L++ ++DL ++LQG SVK+FL+ +D E K DE RQ ASDQEVI+FLDSR QE+ER ++T +K + E +A G ++T+VL DML+FEK++ E +KAQKK+LV EVK R +AL+AE D +Q L+ ++ + R
Sbjct: 468 GLNAAMASSMASKLTAQELSVIISMQNRLRQREGQLGQLRSARDDLASQLQGVGSVKDFLIGKVRDVEKLHKEGQDEIAKITRQVASDQEVIAFLDSRVQELERSLRKTEEKCAGAEEEYRRLRAQGSQKTQVLSDMLQFEKEQLAESEREWKAQKKVLVKEVKSCRAQIVALQAERDGYYEQNSKLKEALLGMNR 663
BLAST of mRNA_Ecto-sp13_S_contig13244.2614.1 vs. uniprot
Match: A0A7S4I957_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4I957_9STRA) HSP 1 Score: 122 bits (305), Expect = 4.170e-26 Identity = 79/191 (41.36%), Postives = 113/191 (59.16%), Query Frame = 1
Query: 721 GMSPELMDDLSKRLTTVEMKGIIQLTERGRRMEARAGALQAEKEDLFARLQGTESVKEFLVXXXKDTEAALKRSLDEKGLTLRQSASDQEVISFLDSRTQEMERVAQETMDKAMTYQTELENQKASGQKQTKVLEDMLRFEKQRGEAGEAAFKAQKKLLVAEVKKLRTTNLALKAECDDLRQQLKDLRTSV 1293
G++ + ++ +LT E+ II + + R + L+AEK+DL ARL G ESVKEFLV KD+E K DE G RQ ASDQEVI+FLD + QE+ER + ++ + EL K G ++ +VL DML+FEK++ E +KAQKK+LV EVK R +AL+AE D +Q L+ ++
Sbjct: 559 GLNAAMASSMASKLTAAELSVIISMQTKLRHKDGELTKLRAEKDDLAARLTGVESVKEFLVTKVKDSEKLHKDGRDELGKIARQVASDQEVIAFLDGKVQELERSLKVAENERAKAEEELSRLKNQGSQKVRVLSDMLQFEKEQLAESEREWKAQKKVLVKEVKSCRAQIVALQAERDGFYEQNGKLKDAL 749
BLAST of mRNA_Ecto-sp13_S_contig13244.2614.1 vs. uniprot
Match: A0A1E7FXV1_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FXV1_9STRA) HSP 1 Score: 121 bits (303), Expect = 6.040e-26 Identity = 105/353 (29.75%), Postives = 173/353 (49.01%), Query Frame = 1
Query: 262 LLDLEKKPLLKVFVFLNAGEVLRAAQVCRPMFRKVDLMFGIGSQAVSAEPTPPAPXXXXXXXXXIVTGGGAPAGARDRAGSAXXXXXXSTGAPGNRLGQRALASAL----GVVASRVEAVTAGASSGFGSLAGAAATLXXXXXXXXXXXXXXXXXXXGMSPELMDDLSKRLTTVEMKGIIQLTERGRRMEARAGALQAEKEDLFARLQGTESVKEFLVXXXKDTEAALKRSLDEKGLTLRQSASDQEVISFLDSRTQEMERVAQE-TMDKAMTYQTELENQKASGQKQTKVLEDMLRFEKQRGEAGEAAFKAQKKLLVAEVKKLRTTNLALKAECDDLRQQLKDLRTSVSQLG 1305
L+ L+ +PL+++F FL+A ++L AQ+ M+ KVD +FGI S P P + A AG +A +T + +G + L S L V + V + G + AT ++ ++ ++ +L+ E+ II +T++ ++E L+ +KE A+L GTE+VK+FL+ +D E L RS +++ +Q ASDQEVI+FLD R QE+E+ + T++K T Q + K S K+ +L DML++E+++ E +KA KK+LV EVK R LAL+AE D ++Q L+ ++ G
Sbjct: 291 LMTLDIEPLIEIFGFLDAMDILNTAQINITMYNKVDNIFGISEDGQSPPAPTPNPVPTTNNNTTDIAPTSAAAGVTSTPPTAAELTAKATVSSAGVMG-KGLFSMLQPKPAVTETSVSSTIPAKRYGDAKSSSTNATSSASSGQQQQP----------LNAKVAQSMASKLSDAELAAIISMTDKLSKLEKEVHMLRNDKEVFAAKLDGTEAVKQFLIGKVRDVEVKLSRSREDEIKVTQQIASDQEVIAFLDGRVQEVEQQTENLTIEKTGT-QANFDGLKISTSKKITMLSDMLKYEREKVREDEGEWKATKKVLVKEVKSCRAQILALQAERDGFKEQNDMLKRAIVSTG 631
BLAST of mRNA_Ecto-sp13_S_contig13244.2614.1 vs. uniprot
Match: A0A448ZNW3_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZNW3_9STRA) HSP 1 Score: 120 bits (302), Expect = 7.070e-26 Identity = 128/350 (36.57%), Postives = 184/350 (52.57%), Query Frame = 1
Query: 262 LLDLEKKPLLKVFVFLNAGEVLRAAQVCRPMFRKVDLMFGIGSQAVSAE-PTPPAPXXXXXXXXXIVTGGGAPAGARDRAGSAXXXXXXSTGAPGNRLGQRALASALGVVASRVEAVTAGASSGFGSLAGAAATLXXXXXXXXXXXXXXXXXXXGMSPELMDDLSKRLTTVEMKGIIQLTERGRRMEARAGALQAEKEDLFARLQGTESVKEFLVXXXKDTEAALKRSLDEKGLTLRQSASDQEVISFLDSRTQEMERVAQE-TMDKAMTYQTELENQKASGQKQTKVLEDMLRFEKQRGEAGEAAFKAQKKLLVAEVKKLRTTNLALKAECDDLRQQLKDLRTSVSQLG 1305
LL LE +PL+ +F FL+A ++L AQ+ M+ KVD +FGI S PTP PXXXXXXXXX V A A XXXXXX + ASA AG G S+ A X ++ ++ ++ +L+ E+ II +T + ++E AL+ EK L A+L+GTE VK+FL+ +D E L+RS +++ +Q ASDQEVI+FLD R QE+E+ + TM+K T Q L++ K S K+ +L DML++E+++ E+ +KA KK+LV EVK R LAL+AE D L +Q L+ +V G
Sbjct: 292 LLTLEMEPLMMIFGFLDAMDILNTAQINVTMYTKVDNIFGISEDGQSPPVPTPSKPXXXXXXXXXAV--------AETPAMKXXXXXXXXXXXXXXXXXXXSPASA------------AGKGRGLFSMMQPAKA--------------EXKQSQPLNAKVAQSMASKLSDAELAAIITMTNKLSKLEKEGRALRNEKAVLLAKLEGTEGVKQFLIGKVRDVEVKLQRSKEDEIKVTQQIASDQEVIAFLDGRVQELEQQTESLTMEKTGT-QAGLDDLKVSTSKKITMLSDMLKYEREKVREDESDWKATKKVLVKEVKSCRAQILALQAERDGLLEQNDMLKRAVVSTG 606
BLAST of mRNA_Ecto-sp13_S_contig13244.2614.1 vs. uniprot
Match: A0A7R9WTV3_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WTV3_9STRA) HSP 1 Score: 114 bits (286), Expect = 1.020e-25 Identity = 70/191 (36.65%), Postives = 119/191 (62.30%), Query Frame = 1
Query: 724 MSPELMDDLSKRLTTVEMKGIIQLTERGRRMEARAGALQAEKEDLFARLQGTESVKEFLVXXXKDTEAALKRSLDEKGLTLRQSASDQEVISFLDSRTQEMERVAQETMDKAMTYQTELENQKASGQKQTKVLEDMLRFEKQRGEAGEAAFKAQKKLLVAEVKKLRTTNLALKAECDDLRQQLKDLRTSVS 1296
++ + ++ +L+ E+ II +TE+ +ME + + EKE+L ARL GTE+VK+FL+ +D E+ L+++ + + +Q +SDQEVI+FLD R QE+E T++ + EL + KAS + VL DML++E+++ E+ +KA KK+LV EVK R +AL+AE D R+Q + L+ +++
Sbjct: 41 LNASVAQSMASKLSDTELAAIISMTEKLSKMERQLITITNEKEELQARLSGTEAVKQFLIGKVRDAESKLQKNQENEIKVTQQISSDQEVIAFLDGRVQELEGTMLTTVEDKSATEAELSSLKASSSNKITVLTDMLKYEREKLREQESEWKATKKVLVKEVKSCRAQIVALQAERDGYREQNELLKHAIT 231
BLAST of mRNA_Ecto-sp13_S_contig13244.2614.1 vs. uniprot
Match: A0A024UFA2_9STRA (F-box domain-containing protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UFA2_9STRA) HSP 1 Score: 113 bits (282), Expect = 1.040e-23 Identity = 75/187 (40.11%), Postives = 110/187 (58.82%), Query Frame = 1
Query: 742 DDLSKRLTTVEMKGIIQLTERGRRMEARAGALQAEKEDLFARLQGTESVKEFLVXXXKDTEAALKRSLDEKGLTLRQSASDQEVISFLDSRTQEMERVAQETMDKAMTYQTELENQKASGQKQTKVLEDMLRFEKQRGEAGEAAFKAQKKLLVAEVKKLRTTNLALKAECDDLRQQLKDLRTSVSQL 1302
DD+ K EMK L R + +E ALQAEKEDL ARLQG E+V++FL+ D E AL ++++K L QS D+EV+++LD+++Q+ + V Q + + + ELE+ + +++VLEDM+R EA E K QKK+LV E++ LR N L EC R QLK L+ S++ L
Sbjct: 258 DDMIKSFNAKEMKFFHDLMIRMKTLEKHLTALQAEKEDLAARLQGAENVRDFLMEKLTDVEDALALAIEDKALADAQSNLDREVMAYLDAKSQDADEVLQLYVTQNQEAKYELEHLRQQHDAKSQVLEDMMRCLTAEKEAVERQAKGQKKVLVKEIRTLRAENSKLHLECSGYRAQLKQLKESLAHL 444
BLAST of mRNA_Ecto-sp13_S_contig13244.2614.1 vs. uniprot
Match: A0A485KIV6_9STRA (Aste57867_7877 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KIV6_9STRA) HSP 1 Score: 112 bits (279), Expect = 1.640e-23 Identity = 76/187 (40.64%), Postives = 108/187 (57.75%), Query Frame = 1
Query: 742 DDLSKRLTTVEMKGIIQLTERGRRMEARAGALQAEKEDLFARLQGTESVKEFLVXXXKDTEAALKRSLDEKGLTLRQSASDQEVISFLDSRTQEMERVAQETMDKAMTYQTELENQKASGQKQTKVLEDMLRFEKQRGEAGEAAFKAQKKLLVAEVKKLRTTNLALKAECDDLRQQLKDLRTSVSQL 1302
D++ K EMK +L R + +EA + QAEKEDL ARLQG E+V++FL+ D E L +++EK + QSA D+EV+++LD +T+E+E Q + Q ELE + + + +V+EDM+R E KAQKK+LV EV+ LRT N L E + R QLK LR S+ QL
Sbjct: 215 DEMIKSFNAKEMKFFHELMIRMKSLEANLVSTQAEKEDLAARLQGAENVRDFLMEKLTDVEDTLTITMEEKANSEAQSALDREVMAYLDGKTEELEFALQSCASQNEVLQIELERFQRQHEAKAQVIEDMIRHVTLEKREIELQAKAQKKVLVKEVRTLRTENTRLAMESNSYRAQLKQLRESLLQL 401
BLAST of mRNA_Ecto-sp13_S_contig13244.2614.1 vs. uniprot
Match: A0A7S2BXQ0_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BXQ0_9STRA) HSP 1 Score: 104 bits (259), Expect = 1.940e-22 Identity = 72/188 (38.30%), Postives = 101/188 (53.72%), Query Frame = 1
Query: 721 GMSPELMDDLSKRLTTVEMKGIIQLTERGRRMEARAGALQAEKEDLFARLQGTESVKEFLVXXXKDTEAALKRSLDEKGLTLRQSASDQEVISFLDSRTQEMERVAQETMDKAMTYQTELENQKASGQKQTKVLEDMLRFEKQRGEAGEAAFKAQKKLLVAEVKKLRTTNLALKAECDDLRQQLKDLR 1284
G++ L ++ +L + EMKGIIQ+TER +++E + +L KED +RLQ TESVKEFLV +DTE ALKR++D T RQ + + L + + + +KQ K LEDML +EK+R EA K+QKKLLV EVK LR + E D +QQ + L+
Sbjct: 10 GLTAALATQIASKLNSTEMKGIIQMTERIKKLEGYSHSLNEAKEDTESRLQATESVKEFLVGKLRDTEMALKRTIDSANETARQHXXXXXXXXXXXXXXXXXXXXXXXALSSRDNAEQSLSSAEEATKKQIKTLEDMLHWEKERSGKQEAEAKSQKKLLVKEVKALRIQLSQMTTERDAYKQQARSLQ 197 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13244.2614.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig13244.2614.1 >prot_Ecto-sp13_S_contig13244.2614.1 ID=prot_Ecto-sp13_S_contig13244.2614.1|Name=mRNA_Ecto-sp13_S_contig13244.2614.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=432bp MQSAHEAAVLAAAAAAAAGIPGSGGGSGTSAEQPGSPDSIGSLGTARQLHback to top mRNA from alignment at Ecto-sp13_S_contig13244:128..3936+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig13244.2614.1 ID=mRNA_Ecto-sp13_S_contig13244.2614.1|Name=mRNA_Ecto-sp13_S_contig13244.2614.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3809bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13244:128..3936+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig13244:128..3936+ >mRNA_Ecto-sp13_S_contig13244.2614.1 ID=mRNA_Ecto-sp13_S_contig13244.2614.1|Name=mRNA_Ecto-sp13_S_contig13244.2614.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1296bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13244:128..3936+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |