mRNA_Ecto-sp13_S_contig1323.2607.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1323.2607.1 vs. uniprot
Match: D8LHV9_ECTSI (Putative: silimar to centromere/kinetochore protein zw10 homolog n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHV9_ECTSI) HSP 1 Score: 214 bits (544), Expect = 7.190e-63 Identity = 103/108 (95.37%), Postives = 106/108 (98.15%), Query Frame = 3
Query: 3 IPSHCAKELFRTARDMLDLFRAVVPVQHANALDGVPRIAAVFQNDCLYLAHHMVTLGYEFRHGLPPPANQTATMIDTVHLFRELAAHSFSEQQRRQQRQLQEFFIGVD 326
IP HCAKELFRTARDMLDLFRAVVPVQHANALDGVPRIAAVFQNDCLYLAHHMVTLG+EFRHGLPPPANQTATMIDTVHLFRELAAHSFSEQQ+RQQRQL EFF+GVD
Sbjct: 534 IPLHCAKELFRTARDMLDLFRAVVPVQHANALDGVPRIAAVFQNDCLYLAHHMVTLGHEFRHGLPPPANQTATMIDTVHLFRELAAHSFSEQQQRQQRQLHEFFVGVD 641
BLAST of mRNA_Ecto-sp13_S_contig1323.2607.1 vs. uniprot
Match: A0A836CAB9_9STRA (Centromere/kinetochore Zw10-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAB9_9STRA) HSP 1 Score: 108 bits (271), Expect = 2.140e-25 Identity = 52/108 (48.15%), Postives = 68/108 (62.96%), Query Frame = 3
Query: 3 IPSHCAKELFRTARDMLDLFRAVVPVQHANALDGVPRIAAVFQNDCLYLAHHMVTLGYEFRHGLPPPANQTATMIDTVHLFRELAAHSFSEQQRRQQRQLQEFFIGVD 326
+P A+ELFRTARD+L+LFRAVVP +H + VPR+AA+F NDC +LAHH T+G+ +R LPPP N ATM+D + +RQ+ QL EF G D
Sbjct: 836 VPPLIARELFRTARDVLELFRAVVPARHGEQMQNVPRLAALFHNDCAFLAHHAATIGHRYRQRLPPPVNSVATMVDMI---------------QRQREQLLEFCAGAD 928
BLAST of mRNA_Ecto-sp13_S_contig1323.2607.1 vs. uniprot
Match: A0A7S2RK91_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RK91_9STRA) HSP 1 Score: 105 bits (263), Expect = 2.530e-24 Identity = 52/105 (49.52%), Postives = 68/105 (64.76%), Query Frame = 3
Query: 9 SHCAKELFRTARDMLDLFRAVVPVQHANALDGVPRIAAVFQNDCLYLAHHMVTLGYEFRHGLPPPANQTATMIDTVHLFRELAAHSFSEQQRRQQRQLQEFFIGV 323
S A L+RTAR+++DLFRAV+P +H+ L +PR AA+F NDCLYLAH +TL +++R LP P N+TAT++D V R L Q QQ QL EF GV
Sbjct: 556 SLAAATLYRTARELMDLFRAVIPQRHSETLQSLPRSAALFHNDCLYLAHEALTLAHQYRGRLPAPLNKTATLVDVVPALRSLGEQVLQRQISLQQGQLDEFLKGV 660
BLAST of mRNA_Ecto-sp13_S_contig1323.2607.1 vs. uniprot
Match: A0A7S3Y8L3_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y8L3_HETAK) HSP 1 Score: 94.7 bits (234), Expect = 3.950e-23 Identity = 48/100 (48.00%), Postives = 64/100 (64.00%), Query Frame = 3
Query: 42 RDMLDLFRAVVPVQHANALDGVPRIAAVFQNDCLYLAHHMVTLGYEFRHGLPPPANQTATMIDTVHLFRELAAHSFSEQQRRQQRQLQEF-----FIGVD 326
RDMLD+FRAVVP+ HA+AL PR+AA+F NDCLY+AHH++ + + +R LP P NQTA +D V FREL + RQ+ L F+G+D
Sbjct: 1 RDMLDMFRAVVPLAHADALAASPRLAALFHNDCLYIAHHLMVMAFLYRPKLPEPLNQTAQTVDMVPAFRELGEKHLRAEIARQRAALGRALGAAPFLGLD 100
BLAST of mRNA_Ecto-sp13_S_contig1323.2607.1 vs. uniprot
Match: UPI0014257F86 (centromere/kinetochore protein zw10 homolog n=1 Tax=Anneissia japonica TaxID=1529436 RepID=UPI0014257F86) HSP 1 Score: 98.6 bits (244), Expect = 9.200e-22 Identity = 45/104 (43.27%), Postives = 70/104 (67.31%), Query Frame = 3
Query: 15 CAKELFRTARDMLDLFRAVVPVQHANALDGVPRIAAVFQNDCLYLAHHMVTLGYEFRHGLPPPANQ-TATMIDTVHLFRELAAHSFSEQQRRQQRQLQEFFIGV 323
CA +LF+T R M +L+ AV+P H ++L P+++A+ N+C+Y+AHH++TLG+++R LPPP Q +AT +D + FR LA F EQ R Q+ Q+ E+ G
Sbjct: 469 CATQLFQTTRSMFELYCAVIPTYHKDSLAKFPQLSALHHNNCMYIAHHLLTLGHQYRDQLPPPLCQGSATFVDEIPQFRHLATDCFMEQMRTQRNQVIEYLNGA 572
BLAST of mRNA_Ecto-sp13_S_contig1323.2607.1 vs. uniprot
Match: A0A1Y1X702_9FUNG (Centromerekinetochore Zw10 n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1X702_9FUNG) HSP 1 Score: 97.8 bits (242), Expect = 1.710e-21 Identity = 44/101 (43.56%), Postives = 66/101 (65.35%), Query Frame = 3
Query: 6 PSHCAKELFRTARDMLDLFRAVVPVQHANALDGVPRIAAVFQNDCLYLAHHMVTLGYEFRHGLPPPANQTATMIDTVHLFRELAAHSFSEQQRRQQRQLQE 308
P A EL+ ARD+ +LFRA+VP+ +A+A++ +P + +F NDC Y+ HH++TLGY+ +H P P +QT T ID V FR L F +RQ+ Q+Q+
Sbjct: 489 PKAGAIELYLCARDIFNLFRALVPIHNADAIENIPLRSLIFYNDCAYITHHLLTLGYQHKHFFPSPLDQTGTFIDLVPYFRNLGEGCFKNHMKRQKLQIQQ 589
BLAST of mRNA_Ecto-sp13_S_contig1323.2607.1 vs. uniprot
Match: A0A8B7YKW3_ACAPL (centromere/kinetochore protein zw10 homolog n=1 Tax=Acanthaster planci TaxID=133434 RepID=A0A8B7YKW3_ACAPL) HSP 1 Score: 97.4 bits (241), Expect = 2.340e-21 Identity = 43/105 (40.95%), Postives = 71/105 (67.62%), Query Frame = 3
Query: 15 CAKELFRTARDMLDLFRAVVPVQHANALDGVPRIAAVFQNDCLYLAHHMVTLGYEFRHGLPPPANQ-TATMIDTVHLFRELAAHSFSEQQRRQQRQLQEFFIGVD 326
CA +LF T R+M ++F VVP H ++L+ +P++ A+ N+C+Y+AHH++TLG+++R LPPP +T +D + +FR+LA+ F Q R Q+ QL E +G +
Sbjct: 476 CAIQLFYTVRNMFEIFCDVVPTYHRDSLEKLPQLCALHHNNCMYIAHHLLTLGHQYRQSLPPPLRDGLSTFVDLIPVFRKLASQCFLAQMRTQRDQLLESLVGAE 580
BLAST of mRNA_Ecto-sp13_S_contig1323.2607.1 vs. uniprot
Match: UPI0018D7A348 (centromere/kinetochore protein zw10 homolog isoform X2 n=2 Tax=Patiria miniata TaxID=46514 RepID=UPI0018D7A348) HSP 1 Score: 96.7 bits (239), Expect = 4.350e-21 Identity = 44/105 (41.90%), Postives = 71/105 (67.62%), Query Frame = 3
Query: 15 CAKELFRTARDMLDLFRAVVPVQHANALDGVPRIAAVFQNDCLYLAHHMVTLGYEFRHGLPPP-ANQTATMIDTVHLFRELAAHSFSEQQRRQQRQLQEFFIGVD 326
CA +LF T R+M ++F VVP H ++L +P++ A+ N+C+Y+AHH++TLG+++R LPPP + T+T +D + +FR+LA+ F Q R Q+ QL E G +
Sbjct: 467 CAIQLFYTVRNMFEIFCDVVPTYHRDSLQKLPQVCALHHNNCMYIAHHLLTLGHQYRQSLPPPLCDGTSTFVDLIPVFRKLASECFLAQMRIQRDQLVESLSGAE 571
BLAST of mRNA_Ecto-sp13_S_contig1323.2607.1 vs. uniprot
Match: UPI0018D814D0 (centromere/kinetochore protein zw10 homolog isoform X1 n=5 Tax=Patiria miniata TaxID=46514 RepID=UPI0018D814D0) HSP 1 Score: 96.7 bits (239), Expect = 4.350e-21 Identity = 44/105 (41.90%), Postives = 71/105 (67.62%), Query Frame = 3
Query: 15 CAKELFRTARDMLDLFRAVVPVQHANALDGVPRIAAVFQNDCLYLAHHMVTLGYEFRHGLPPP-ANQTATMIDTVHLFRELAAHSFSEQQRRQQRQLQEFFIGVD 326
CA +LF T R+M ++F VVP H ++L +P++ A+ N+C+Y+AHH++TLG+++R LPPP + T+T +D + +FR+LA+ F Q R Q+ QL E G +
Sbjct: 476 CAIQLFYTVRNMFEIFCDVVPTYHRDSLQKLPQVCALHHNNCMYIAHHLLTLGHQYRQSLPPPLCDGTSTFVDLIPVFRKLASECFLAQMRIQRDQLVESLSGAE 580
BLAST of mRNA_Ecto-sp13_S_contig1323.2607.1 vs. uniprot
Match: A0A0D2WI78_CAPO3 (Centromere/kinetochore protein zw10 n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2WI78_CAPO3) HSP 1 Score: 96.7 bits (239), Expect = 4.380e-21 Identity = 46/103 (44.66%), Postives = 62/103 (60.19%), Query Frame = 3
Query: 18 AKELFRTARDMLDLFRAVVPVQHANALDGVPRIAAVFQNDCLYLAHHMVTLGYEFRHGLPPPANQTATMIDTVHLFRELAAHSFSEQQRRQQRQLQEFFIGVD 326
A LF RDM DL+RAVVPV H + VP + +F NDC+++AHH++TLG +F+ LPPP N TAT +D V FR+L F Q Q+ L E + +
Sbjct: 524 AVHLFVAVRDMFDLYRAVVPVHHGATFERVPMLGMLFHNDCMFIAHHLITLGIQFKSRLPPPMNATATFVDMVVPFRQLGERFFVHQMDLQRDLLIEAIVSAN 626 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1323.2607.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1323.2607.1 >prot_Ecto-sp13_S_contig1323.2607.1 ID=prot_Ecto-sp13_S_contig1323.2607.1|Name=mRNA_Ecto-sp13_S_contig1323.2607.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=75bp RSRLIALRSCSVRRGTCSTFSGRWFPSNTPTPWTASLASRRSSRTTASTSback to top mRNA from alignment at Ecto-sp13_S_contig1323:16364..17360- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1323.2607.1 ID=mRNA_Ecto-sp13_S_contig1323.2607.1|Name=mRNA_Ecto-sp13_S_contig1323.2607.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=997bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1323:16364..17360- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1323:16364..17360- >mRNA_Ecto-sp13_S_contig1323.2607.1 ID=mRNA_Ecto-sp13_S_contig1323.2607.1|Name=mRNA_Ecto-sp13_S_contig1323.2607.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=225bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1323:16364..17360- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |