mRNA_Ecto-sp13_S_contig1323.2606.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1323.2606.1 vs. uniprot
Match: D8LHV8_ECTSI (GDSL-like lipolytic enzyme n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHV8_ECTSI) HSP 1 Score: 833 bits (2151), Expect = 1.470e-300 Identity = 420/479 (87.68%), Postives = 434/479 (90.61%), Query Frame = 1
Query: 1 MFLVSGLVAWSAISSAWGAIDVSLSEGLGEQGSAEGA-IGELSNRRRAEEVRARGNRSGCKEGYPCGTGSEETKIIVFGDSNSDAGRRFNSPNVYAFSDIGVYPWEKVDDADGEXXXXXXXXXXXXXXXXXXXXXXXXIVQNYATGSGTATDTFRSQQLCTGYTAKADKTSRRTGTLSEQMTKYLKDFSLEDGKIGCSSEYTHFIGIGMNDISNVAEAMQRTALAEYLGVTYTEPVSVDDMNFVTMMQGVTDDIVTAVATLMEMGVTGRILVPNFPSPFGVPAFDSPDVYYGLTLAEFYDQFITTMNTMLDSKLSALSSAREDQVRVLDLYSLIDASVHDSDIFNEEGFKTPSTPEQCLTYNFHVDSSTDILGSQAQALRGKLFDWAQCDNYGPTDECVLCQDQMSPCQNCLVDPPTVSVCDSPDEHIFWDGLHTTDAFNKVFANAVFECSKDEPDGCQPWVDKLCSYAASTDCSDEEC 1434
MFLVSGLVAWSAISSAWGAIDVSLSEG+GEQG+AEGA IGE SNRRRAEEVRA GNR+GCK+ YPCGTGSEETKIIVFGDSNSDAGRRF++PNVY FSDIGVYPWEKV DADGE VQNYATGSGTATDTFRSQQLCTGYT KADK SRRTGTL EQMTKYLKDFSLEDGKIGCSSEYTHFIGIGMND+SNVAEAMQRTALAEYLGVTYTEPVSVDDMNFVTMMQGVTDDIV AVATL+EMGVTGRILVPNFPSPFGVPAFDSPDVYYGLTLAEFYDQFITTMNTMLD KLSALSSA EDQVRVLDLYSLID+SVHD DIFNEEGFKT STPEQCLTYNFHVDSSTDI+GSQAQALRGKLFDWAQCDNYGPTDECVLCQDQMSPCQNCLVDPPTVSVCDSPDEHIFWDGLHTTDAFNKVFANAVFECSKDE DG QPWV KLC A +T+CS++EC
Sbjct: 8 MFLVSGLVAWSAISSAWGAIDVSLSEGVGEQGTAEGANIGEPSNRRRAEEVRAHGNRNGCKKDYPCGTGSEETKIIVFGDSNSDAGRRFDAPNVYPFSDIGVYPWEKVYDADGEGMVDVYHEGTNTNGKVWAQYLNIPNVQNYATGSGTATDTFRSQQLCTGYTTKADKASRRTGTLGEQMTKYLKDFSLEDGKIGCSSEYTHFIGIGMNDVSNVAEAMQRTALAEYLGVTYTEPVSVDDMNFVTMMQGVTDDIVAAVATLIEMGVTGRILVPNFPSPFGVPAFDSPDVYYGLTLAEFYDQFITTMNTMLDLKLSALSSAGEDQVRVLDLYSLIDSSVHDRDIFNEEGFKTSSTPEQCLTYNFHVDSSTDIMGSQAQALRGKLFDWAQCDNYGPTDECVLCQDQMSPCQNCLVDPPTVSVCDSPDEHIFWDGLHTTDAFNKVFANAVFECSKDELDGSQPWVGKLCP-AVATECSEKEC 485
BLAST of mRNA_Ecto-sp13_S_contig1323.2606.1 vs. uniprot
Match: D7FJN0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJN0_ECTSI) HSP 1 Score: 206 bits (524), Expect = 2.300e-56 Identity = 141/425 (33.18%), Postives = 208/425 (48.94%), Query Frame = 1
Query: 217 KIIVFGDSNSDAGRRFNSPNVYAFSD--IGVYPWEKV---DDADGEXXXXXXXXXXXXXXXXXXXXXXXXIVQNYATGSGTATDTFRSQQLCTGYTAKADKTSRRTGTLSEQMTKYLKDFSLEDGKIGCSSE---YTHFIGIGMNDISNVAEAMQRTALAEYLGVTYTEPVSVDDM--------------------NFVTMMQGVTDDIVTAVATLMEMGVTGRILVPNFPSPFGVPAFDSPDVYYGLTLAEFYDQFITTMNTMLDSKLSALSSAREDQVRVLDLYSLIDASVHDSDIFNEEGFKTPST----PEQCLTYNFHVDSSTDILGSQAQALRGKLFDWAQCDNYGPTDECVLCQDQMSPCQNCLVDPPTVSVCDSPDEHIFWDGLHTTDAFNKVFANAVFECSKDEPDGCQPWVDKLC 1395
K++VFGDSN+D GRRFN+P + F D IG +PW+++ D+D + N+AT SG+ATD FRS++ CTGYT + + T TL EQ+ +Y + + D E YTH I IG N+++ V EA+ R ++ G Y +PV+ D + F M++ V + L++ GVTGRIL+ N SP G+ G A DQ + L S L + QVR+LD+Y+L A V D +F + GF TP + C+ +NF VD + +I+G+QA LR N +EC+LC D +PC C VD P ++ CD P +F+DG+H T F+ +F A+ +CSKD P+ +P+V +C
Sbjct: 44 KMVVFGDSNADTGRRFNAPASFQFEDEGIGPFPWKRLYDGPDSDEKTAAYMPFEGSVSNGKAWPTWLRIPDEHNFATSSGSATDAFRSRERCTGYTGEGEDFP--TATLEEQIDRYF--YEIVDDASTTKDETLDYTHVIFIGTNELNRVVEAITRYSIG---GEGYEDPVAFDKVFEVNATTGFPVLDESGLPVPTFAPMIEEVLGAWDEGIGRLIDAGVTGRILLANVGSPKGLAGIA------GTETATVLDQ----VALFLRSGAELLVAKYAGQVRMLDMYTLFAALVDDESLFTDLGF-TPGEGSLLADSCIQFNFFVDDAAEIMGTQA--LR----------NPDCQEECMLCADSTTPCATCFVDQPAITKCDDPSSKVFYDGIHFTTDFHLIFGEAIRQCSKDSPNFDRPFVGVMC 438
BLAST of mRNA_Ecto-sp13_S_contig1323.2606.1 vs. uniprot
Match: D7FJN5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJN5_ECTSI) HSP 1 Score: 201 bits (510), Expect = 4.460e-54 Identity = 138/422 (32.70%), Postives = 206/422 (48.82%), Query Frame = 1
Query: 217 KIIVFGDSNSDAGRRFNSPNVYAFSD--IGVYPWEKV---DDADGEXXXXXXXXXXXXXXXXXXXXXXXXIVQNYATGSGTATDTFRSQQLCTGYTAKADKTSRRTGTLSEQMTKYLKDFSLEDGKIGCSSEYTHFIGIGMNDISNVAEAMQRTALAEYLGVTYTEPVSVDDM--------------------NFVTMMQGVTDDIVTAVATLMEMGVTGRILVPNFPSPFGVPAFDSPDVYYGLTLAEFYDQFITTMNTMLDSKLSALSSAREDQVRVLDLYSLIDASVHDSDIFNEEGFKTPST----PEQCLTYNFHVDSSTDILGSQAQALRGKLFDWAQCDNYGPTDECVLCQDQMSPCQNCLVDPPTVSVCDSPDEHIFWDGLHTTDAFNKVFANAVFECSKDEPDGCQPWVDKLC 1395
K++VFGDSNSD GRR+N+PN + + IG +PW+++ D+D + N+AT S +ATD FRS++ CTGYT + + T TL EQ+ +Y + E + + +YTH I IG N+++ V EA+ R + G Y +PV+ + + F M++ V + L+ GVTGRIL+ N SP G+ + L + Q + +L +K S QVR+LDLY+L A V D IF + GF TP + C+ NF VD + +I+G+QA LR N +EC LC D +PC CLVD P ++ CD P +F+DG+H T F+ +F A+ +CSKD P+ +P+V +C
Sbjct: 40 KMVVFGDSNSDTGRRYNAPNSFQLKEDGIGAFPWKRLYDGPDSDEKTSAYMPFEGSVSNGKAWPTWLRIPDEHNFATSSASATDAFRSRERCTGYTGEGEDFP--TATLEEQIDRYFYEIVNETDE---TLDYTHVIFIGTNELNRVVEAITRYSTG---GEGYEDPVAFEKVFEVDATTGFPVFDASGLPVPTFAPMIEEVLGAWDEGIGRLIGAGVTGRILLANVGSPKGLTGIAGTET---AILLDSVAQALRVGAQLLVAKYS-------HQVRMLDLYTLFAALVDDESIFTDLGF-TPGEGSLLADSCIQVNFFVDDAAEIMGTQA--LR----------NPDCQEECTLCADSTTPCATCLVDQPAITKCDDPSNKVFYDGVHFTTDFHLIFGEAIRQCSKDSPNFDRPFVGVMC 430
BLAST of mRNA_Ecto-sp13_S_contig1323.2606.1 vs. uniprot
Match: D8LCE7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LCE7_ECTSI) HSP 1 Score: 197 bits (502), Expect = 2.350e-53 Identity = 135/411 (32.85%), Postives = 201/411 (48.91%), Query Frame = 1
Query: 217 KIIVFGDSNSDAGRRFNSPNVYAFSDIGVYPWEKVDDA-DGEXXXXXXXXXXXXXXXXXXXXXXXXIVQ--NYATGSGTATDTFRSQQLCTGYTAKADKTSRRTGTLSEQMTKYLKDFSLEDGKIGCSSEYTHFIGIGMNDISNVAEAMQRTALAEYLGVTYTEPVSVDDMNF------------VTMMQGVTDDIVTAVATLMEMGVTGRILVPNFPSPFGVPAFDSPDVYYGLTLAEFYDQFITTMNTMLDSKLSALSSAREDQVRVLDLYSLIDASVHDSDIFNEEGFKTPS---TPEQCLTYNFHVDSSTDILGSQAQALRGKLFDWAQCDNYGPTDECVLCQDQMSPCQNCLVDPPTVSVCDSPDEHIFWDGLHTTDAFNKVFANAVFECSKDEPDGCQPWVDKLC 1395
K++VFGDS SD GRR+N+P Y F IGVYPW K+ +A D E + Q N+AT + +AT+TFR+++ C GYT + + TGTL EQ+T+Y D L + +++YTH I IG D+++ + A R ++ G Y +P DM F V ++ + + + +A L++ GVTG IL+ N +P G+ + Y G L E T+ ++ A++ DQVR+LD Y+L A V +IF GF P + CL +F VD ++ G+QA LR G +EC LC D SPC C P+ VC PD +FW + + AF+ + A+ +CSKD P+ +P V +LC
Sbjct: 48 KMVVFGDSQSDTGRRYNAPASYVFEGIGVYPWPKLYEAPDSESKFRAFLPGAGSMTNGKMWPEWLNVPQELNFATATASATETFRTRENCEGYTGEGEDLP--TGTLDEQITRYFNDADLHE-----TADYTHIIYIGNEDLNSHSAATARYSIG---GEGYVDPYVPFDMLFDVADDGTVTSTHVHIIAELAESWRSGIARLIDAGVTGTILLGNIGNPEGLSS------YIGTPLGEIVRSIALTIR----AEAQAVADEFPDQVRILDNYTLFSAIVDTPEIFENLGFVAPEGSFLSDPCLDLDFAVDYLGEVAGTQA--LRP----------VGCQEECALCADNTSPCGTCFEGNPSGQVCSDPDSRLFWGSRYFSTAFHHILGEAIRQCSKDSPNYDRPVVLELC 426
BLAST of mRNA_Ecto-sp13_S_contig1323.2606.1 vs. uniprot
Match: D7FYC5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYC5_ECTSI) HSP 1 Score: 193 bits (491), Expect = 1.110e-51 Identity = 144/424 (33.96%), Postives = 204/424 (48.11%), Query Frame = 1
Query: 217 KIIVFGDSNSDAGRRFNSPNVYAFSD--IGVYPWEKV---DDADGEXXXXXXXXXXXXXXXXXXXXXXXXIVQNYATGSGTATDTFRSQQLCTGYTAKADKTSRRTGTLSEQMTKYLKDFSLEDGKIGCSS--EYTHFIGIGMNDISNVAEAMQRTALAEYLGVTYTEPVSVDDM--------------------NFVTMMQGVTDDIVTAVATLMEMGVTGRILVPNFPSPFGVPAFDSPDVYYGLTLAEFYDQFITTMNTMLDSKLSALSSAREDQVRVLDLYSLIDASVHDSDIFNEEGFKTPST----PEQCLTYNFHVDSSTDILGSQAQALRGKLFDWAQCDNYGPTDECVLCQDQMSPCQNCLVDPPTVSVCDSPDEHIFWDGLHTTDAFNKVFANAVFECSKDEPDGCQPWVDKLC 1395
+++V GDSNSD GRRFN+P + F D IG +PW++V D+D + N+AT S TATD FRS++ CTGYT + + T TL EQ+ +Y + ++D + +YTH I IG+N++ A A+ R ++ G Y +PV+ D + F M++ V +A L+ GVTGRIL+ N S G+ D G A DQ + +L S L QVR+LD+Y+L A V D IF + GF TP E C+ +NF VD + +I+G+QA LR N +EC LC D +PC CLVD P V+ CD P IF+D +H T F+ V A+ +CSKD P+ + +V LC
Sbjct: 38 QMVVLGDSNSDTGRRFNTPASFQFEDEGIGPFPWKRVYDGPDSDEKTAAYMPFEGSVTNGKVWPTWLRIPDEHNFATSSATATDAFRSRERCTGYTGEGEDFP--TATLEEQIDRYFYEI-VDDTSTTTNDTLDYTHVIFIGINELIMAAAAVTRYSIG---GEGYQDPVAFDKVFEVNATTGLPVLDENGLPVPTFTPMIEEVLGAWDEGIARLIGAGVTGRILLANVGSLKGL------DGIAGTETATVLDQ----ITLVLRSGAELLVDKYAGQVRMLDMYTLFAALVDDESIFLDLGF-TPGEGSLLAETCIQFNFVVDDAAEIMGTQA--LR----------NPDCQEECALCADSTTPCATCLVDQPAVTKCDDPSTKIFYDSIHFTTDFHLVLGEAIRQCSKDSPNFDRAFVGVLC 432 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1323.2606.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 5
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1323.2606.1 >prot_Ecto-sp13_S_contig1323.2606.1 ID=prot_Ecto-sp13_S_contig1323.2606.1|Name=mRNA_Ecto-sp13_S_contig1323.2606.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=479bp MFLVSGLVAWSAISSAWGAIDVSLSEGLGEQGSAEGAIGELSNRRRAEEVback to top mRNA from alignment at Ecto-sp13_S_contig1323:4887..10124- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1323.2606.1 ID=mRNA_Ecto-sp13_S_contig1323.2606.1|Name=mRNA_Ecto-sp13_S_contig1323.2606.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5238bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1323:4887..10124- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1323:4887..10124- >mRNA_Ecto-sp13_S_contig1323.2606.1 ID=mRNA_Ecto-sp13_S_contig1323.2606.1|Name=mRNA_Ecto-sp13_S_contig1323.2606.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1437bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1323:4887..10124- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |