mRNA_Ecto-sp13_S_contig1322.2603.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1322.2603.1 vs. uniprot
Match: A0A6H5JDQ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDQ6_9PHAE) HSP 1 Score: 727 bits (1877), Expect = 1.110e-262 Identity = 366/396 (92.42%), Postives = 377/396 (95.20%), Query Frame = 1
Query: 1 MATPSSDTPSSSPPGGAGSMRPVRRKQRGWVFKIDGVANHDMTEEDLFFAVRERYTTVKRLALKNAAAGPASEAVEPASKSTHDQVGFQAAAAGGVLVEIQFAGPQPSEGCGALLCHLLRGSSVEARPVELPRGRKKNTAARSDAGGPTADGHVFSG--YGGSMLLPPHQGFDDQGLPFPGMQHPLGGHPSYSGSGEGQHSLSSTGHGFGGAGMGEERRLPIEGVVVALARKECDFEGRPLPGGGSGMTPSSSVSSNGRDTHVVFTGLNNTGHDPRGLRVTVIFGVDAVHQIACVTSPIQVAADGRAYSRVFYPSLEEVWPELYYTVDVRAVEVDIAVEILSDDGREFRYVGPHLKVGYTRITPPAGAMGMIPAAFSASSGNPSAGMRQPGFPGGA 1182
MATPSSDTPSSSP GGAGSMRPVRRKQRGWVFKIDG+ANH+MTEEDLFFAVRERYTTVKRLALKNA+ GPASE EPASKSTHD+VGFQAA AGGVLVEIQFAGPQPSEGCGALLCHLLRG+SVEARPVELPRGRKKNT ARSDAG ADGHVFSG YGGSMLLPPHQGFDDQGL FPGMQHPLGGHPSYSGSGEGQH L S+GHGFGGAGM EERRLPIEGVVVALARKECDFEGRPLPGGGSGMTPSS+VSSNGRDTHVVFTGL+NTGHDPRGLRVTVIFGVDAVHQIACVTSP+QVAADGRAYSRVFYPSLE+VWPELYYTVDVRAVEVD+AVEILSDDGREFRYVGPHLKVGYTRITPP AMGMI AAFSASSGNPSA MRQPGFPGGA
Sbjct: 1 MATPSSDTPSSSPTGGAGSMRPVRRKQRGWVFKIDGIANHEMTEEDLFFAVRERYTTVKRLALKNASPGPASEGAEPASKSTHDRVGFQAAVAGGVLVEIQFAGPQPSEGCGALLCHLLRGTSVEARPVELPRGRKKNTDARSDAGAAAADGHVFSGAGYGGSMLLPPHQGFDDQGLLFPGMQHPLGGHPSYSGSGEGQHPLFSSGHGFGGAGMAEERRLPIEGVVVALARKECDFEGRPLPGGGSGMTPSSTVSSNGRDTHVVFTGLHNTGHDPRGLRVTVIFGVDAVHQIACVTSPVQVAADGRAYSRVFYPSLEDVWPELYYTVDVRAVEVDVAVEILSDDGREFRYVGPHLKVGYTRITPPVSAMGMISAAFSASSGNPSAAMRQPGFPGGA 396
BLAST of mRNA_Ecto-sp13_S_contig1322.2603.1 vs. uniprot
Match: D7G7N4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7N4_ECTSI) HSP 1 Score: 332 bits (852), Expect = 1.030e-110 Identity = 165/180 (91.67%), Postives = 169/180 (93.89%), Query Frame = 1
Query: 538 MQHPLGGHPSYSGSGEGQHSLSSTGHGFGGAG---MGEERRLPIEGVVVALARKECDFEGRPLPGGGSGMTPSSSVSSNGRDTHVVFTGLNNTGHDPRGLRVTVIFGVDAVHQIACVTSPIQVAADGRAYSRVFYPSLEEVWPELYYTVDVRAVEVDIAVEILSDDGREFRYVGPHLKVG 1068
M HP GGHPSYSGSGEG H LSSTGHGFG M EERRLPIEGVVVALARKECDFEGRPLPGGGSGMTPSS+VSSNGRDTHVVFTGLN+TGHDPRGLRVTVIFGVDAVHQIACVTSPIQVAADGRAYSRVFYPSLEEVWPELYYTVDVRAVEVD+AVE+LSDDGREFRYVGPHLKVG
Sbjct: 1 MHHPPGGHPSYSGSGEGHHPLSSTGHGFGXXXXXXMAEERRLPIEGVVVALARKECDFEGRPLPGGGSGMTPSSTVSSNGRDTHVVFTGLNDTGHDPRGLRVTVIFGVDAVHQIACVTSPIQVAADGRAYSRVFYPSLEEVWPELYYTVDVRAVEVDVAVEVLSDDGREFRYVGPHLKVG 180
BLAST of mRNA_Ecto-sp13_S_contig1322.2603.1 vs. uniprot
Match: D7G7N5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7N5_ECTSI) HSP 1 Score: 206 bits (525), Expect = 2.280e-59 Identity = 105/173 (60.69%), Postives = 129/173 (74.57%), Query Frame = 1
Query: 574 GSGEGQHSLSSTGHGFGGAGM-GEERRLPIEGVVVALARKECDFEGRPLPGGGSGMTPSSSVSSNGRDTHVVFTGLNNTGHDPRGLRVTVIFGVDAVHQIACVTSPIQVAADGRAYSRVFYPSLEEVWPELYYTVDVRAVEVDIAVEILSDDGREFRYVGPHLKVGYTRITPP 1089
G+ G SLSST A + G+ RLP+ VVV ++RKECD EGRP+ G+ +TP ++ S + R++H+ FTGL TGHD RGLRVT IFGVDAVHQIACVTSPI+V DGRAYSRVFYP ++E+WPELY T ++R VEVD+A+EILSD EFR+VGPHLKV Y R PP
Sbjct: 75 GTASGVDSLSSTPESSWDAELVGDFGRLPMGDVVVEVSRKECDLEGRPITRIGNSLTPITASSPDVRESHIEFTGLEKTGHDLRGLRVTAIFGVDAVHQIACVTSPIEVGPDGRAYSRVFYPGMQEIWPELYNTSNIRLVEVDVAIEILSDTCGEFRFVGPHLKVAYRRAIPP 247
BLAST of mRNA_Ecto-sp13_S_contig1322.2603.1 vs. uniprot
Match: D7FZ48_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FZ48_ECTSI) HSP 1 Score: 173 bits (439), Expect = 1.350e-44 Identity = 88/154 (57.14%), Postives = 107/154 (69.48%), Query Frame = 1
Query: 652 LPIEGVVVALARKECDFEGRPLPGGGSGMTPSSSVSSNGRDTHVVFTGLNNTGHDPRGLRVTVIFGVDAVHQIACVTSPIQVAADGRAYSRVFYPSLEEVWPELYYTVDVRAVEVDIAVEILSDDGREFRYVGPHLKVGYTRITPPAGAMGMIP 1113
LP+E VV+ +R ECDFEGRP P SS R H+VFTGLNNTG D R LRVT FGVD+VH++ VTSPIQ+ ++GRAY+ VFYPS++E+WPELY T ++R VEVD+ VEI SD G E++YVGP LKV Y R PPA A P
Sbjct: 370 LPMEKVVIEPSRNECDFEGRPTPPTDPKSGEPPIPSSTDRQCHLVFTGLNNTGQDLRSLRVTAHFGVDSVHKVGKVTSPIQLGSNGRAYAGVFYPSMQEIWPELYSTSNIRVVEVDLVVEIRSDSG-EYQYVGPQLKVTYLRAAPPADAAEATP 522
BLAST of mRNA_Ecto-sp13_S_contig1322.2603.1 vs. uniprot
Match: A0A6H5JMY9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMY9_9PHAE) HSP 1 Score: 147 bits (372), Expect = 3.150e-38 Identity = 71/120 (59.17%), Postives = 92/120 (76.67%), Query Frame = 1
Query: 634 MGEERRLPIEGVVVALARKECDFEGRPLPGGGSGMTPSSSVSSNGRDTHVVFTGLNNTGHDPRGLRVTVIFGVDAVHQIACVTSPIQVAADGRAYSRVFYPSLEEVWPELYYTVDVRAVE 993
+G+ RLP+ VVV ++RKECD EGRP+ G+ +TP ++ S++ R++ + FTGL TGHD RGL VT IFGVDAVHQIACVTSPI+V GRA SRVFYP ++E+WPELY T ++R VE
Sbjct: 100 VGDCGRLPMGDVVVEVSRKECDLEGRPIARIGNSLTPITASSTDVRESLIEFTGLEKTGHDLRGLCVTAIFGVDAVHQIACVTSPIEVGPSGRACSRVFYPGMQEIWPELYNTSNIRLVE 219
BLAST of mRNA_Ecto-sp13_S_contig1322.2603.1 vs. uniprot
Match: D7FZ47_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ47_ECTSI) HSP 1 Score: 112 bits (280), Expect = 8.380e-26 Identity = 71/145 (48.97%), Postives = 91/145 (62.76%), Query Frame = 1
Query: 37 PPGGAGSM------------RPVRRKQRGWVFKIDGVANHDMTEEDLFFAVRERYTTVKRLALKNAAAGPASEAVEPASKSTHDQVGFQAAAAGGVLVEIQFAGPQPSEGCGALLCHLLRGSSVEARPVELPRGRKKNTAARSDA 435
P GGAG++ R RRKQR W+F++DGV ++ +E +L ++RERYTTVKRL ++ AA +AV A S + V+VE+QF GPQPSEG GALLC LL G SV+A+PVELPRGRKK AR+DA
Sbjct: 16 PTGGAGAVXXXXXXXXXXGARTARRKQRCWLFQVDGVTSN-ASEVELLASIRERYTTVKRLVVRPAATS--KDAVAAADGSPRN-----------VVVEVQFTGPQPSEGPGALLCDLLCGVSVDAKPVELPRGRKKR--ARTDA 144
BLAST of mRNA_Ecto-sp13_S_contig1322.2603.1 vs. uniprot
Match: A0A6H5JSU0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSU0_9PHAE) HSP 1 Score: 85.5 bits (210), Expect = 1.680e-16 Identity = 41/46 (89.13%), Postives = 43/46 (93.48%), Query Frame = 1
Query: 283 GVLVEIQFAGPQPSEGCGALLCHLLRGSSVEARPVELPRGRKKNTA 420
G+LVEIQFAGPQPSEGCGALLC+LLRGSSVEAR VELPRGRKK A
Sbjct: 47 GMLVEIQFAGPQPSEGCGALLCNLLRGSSVEARAVELPRGRKKKIA 92
BLAST of mRNA_Ecto-sp13_S_contig1322.2603.1 vs. uniprot
Match: D7G6J1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6J1_ECTSI) HSP 1 Score: 85.1 bits (209), Expect = 5.180e-16 Identity = 50/141 (35.46%), Postives = 74/141 (52.48%), Query Frame = 1
Query: 679 LARKECDFEGRPLPGGGSGMTPSSSVS---SNGRDTHVVFTGLNNTGHDPRGLRVTVIFGVDAVHQIACVTSPIQVAADGRAYSRVFYPSLEEVWPELYYTVDVRAVEVDIAVEILSDDGREFRYVGPHLKVGY--TRITP 1086
+ + CDF GR + + PS+ + S + H+VFTGL G L TV F +++ +A P+QV D R Y V YP++ E+WPE+Y V V V+VD+ + + S + RY G LKV Y TR++P
Sbjct: 1 MCSQVCDFHGRAVAHPQESVVPSALAACFMSGSLEQHLVFTGLVGAGPHLDYLTTTVYFSINSGRPLARAAGPMQVGEDERVYVAVKYPTMNELWPEIYQNVAVEVVQVDVFITVRSGH-KTIRYPGTELKVTYRRTRMSP 140
BLAST of mRNA_Ecto-sp13_S_contig1322.2603.1 vs. uniprot
Match: A0A6H5JZ42_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZ42_9PHAE) HSP 1 Score: 76.6 bits (187), Expect = 1.880e-11 Identity = 48/145 (33.10%), Postives = 71/145 (48.97%), Query Frame = 1
Query: 658 IEGVVVALARKECDFEGR---PLPGGGSGMTPSSSVSSNGRDTHVVFTGLNNTGHDPRGLRVTVIFGVDAVHQIACVTSPIQVAA--DGRAYSRVFYPSLEEVWPELYYTVDVRAVEVDIAVEILSDDGREFRYVGPHLKVGYTR 1077
++ V + R++ DFEGR P GS + SV + + ++VF GL TG L F + Q + P+Q A +GR Y V YPS+ E+WPE+Y + +R V+VD+ VE+ S G Y+ L Y R
Sbjct: 279 VDNVFIESLREDFDFEGRTIEPNKPSGSPFAAALSVPRSDDEQYLVFIGLGETGRPLPALAARAQFSANPGRQAERMVGPLQARAGSNGRVYGAVQYPSMAELWPEVYNSKAIRVVKVDMLVEVRSRSGDSL-YLATELMAMYRR 422
BLAST of mRNA_Ecto-sp13_S_contig1322.2603.1 vs. uniprot
Match: D8LCL1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCL1_ECTSI) HSP 1 Score: 75.9 bits (185), Expect = 2.090e-11 Identity = 48/140 (34.29%), Postives = 70/140 (50.00%), Query Frame = 1
Query: 688 KECDFEGR---PLPGGGSGMTPSSSVSSNGRDTHVVFTGLNNTGHDPRGLRVTVIFGVDAVHQIACVTSPIQVAADGRAYSRVFYPSLEEVWPELYYTVDVRAVEVDIAVEILSDDGREFRYVGPHLKVGYTRITPPAGA 1098
++ DFEGR P S + SV + + H+VF GL TG L F + + + P+Q ++GR Y V YPS+ E+WPE+Y + +R V+VD+ VE+ S G Y+ LK Y R PP G+
Sbjct: 207 EDFDFEGRTIEPNKPSDSPFAAAFSVPRSDDEQHLVFIGLGETGRPLPTLAARAQFSANPGRKAERMVGPLQAGSNGRVYGAVQYPSMAELWPEVYNSTAIRVVKVDMLVEVRSRYGDSL-YLATELKAMYRR--PPGGS 343 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1322.2603.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 13
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1322.2603.1 >prot_Ecto-sp13_S_contig1322.2603.1 ID=prot_Ecto-sp13_S_contig1322.2603.1|Name=mRNA_Ecto-sp13_S_contig1322.2603.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=441bp MATPSSDTPSSSPPGGAGSMRPVRRKQRGWVFKIDGVANHDMTEEDLFFAback to top mRNA from alignment at Ecto-sp13_S_contig1322:3887..10108+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1322.2603.1 ID=mRNA_Ecto-sp13_S_contig1322.2603.1|Name=mRNA_Ecto-sp13_S_contig1322.2603.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=6222bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1322:3887..10108+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1322:3887..10108+ >mRNA_Ecto-sp13_S_contig1322.2603.1 ID=mRNA_Ecto-sp13_S_contig1322.2603.1|Name=mRNA_Ecto-sp13_S_contig1322.2603.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1323bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1322:3887..10108+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |