mRNA_Ecto-sp13_S_contig13195.2591.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig13195.2591.1 vs. uniprot
Match: D8LD11_ECTSI (PPR_long domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LD11_ECTSI) HSP 1 Score: 766 bits (1978), Expect = 8.640e-270 Identity = 412/509 (80.94%), Postives = 426/509 (83.69%), Query Frame = 1
Query: 1 DDHLSGGDSSSAGGGDHHLQTLLSAFNADSNFVSNESDVQTYLSSPPQIASVSSASLASGGVCDCCGAALKVVGLDTAACARVRSALVELASETAYPTSPPPPALPLQAKRRQSSRLEYAYTGEGQGEMDRGGLGEAMGDLEQFAAWLEERGREGVHFTTVVDGCNVAYYGQNKEGGKFEISQVDLMARQLERNGERVLVILPERYLRPCVPNSARSRRGKNPSSALSDEDLETIDGWRQRHMLYSCANGTDDDLFWMYFTVSSDAAAIEGEVKVTNGDGGDGLRENRQGYKPSNSNGVDGIFVRGQEATLRGAFAGGDD-ETGLGGTGEDGGQGGERARTRTGVGSLGDGFAGRLTVVSNDEMRNHRMALLEPVPFKRWRKSQVRGFHFPAILPKDGSRGLSVSN-GSRDSSADEDKGEKTSERERHKTPVQGSPSPLPIVCPSPAFTRDMQVLNKHAWHIPIGDGQDAEPSTKWLCINLAALVEEEEDGQAAELRPSEVIPRRKYRS 1521
DDH+SG SSAG GDHHLQTLLSAFNADSNFVS+ESDVQTY SSPP++ASVSSASLASGGVCDCCGAALKVVGLD A ARVRSALV+LASETAYPT QSSRL+YAY GEGQGEMDR GLGEAMGDLE+FAAWLEER REGVHFTTVVDGCNVAYYGQNKEGGKFEISQVDLMARQLER+GERVLVILPERYLRPCVPNSARSRRGKNPSSALSDEDLETID WR+R MLYSCANGTDDDLFWMYFTVSSDA AIEGE +VTNGDGG GLRENRQGYKPSNSNGVDGI+V QEAT RG FAGGDD ET LGGTGE GQ S GDG AGRLTVVSNDEMRNHRMALLEPVPFKRWRKSQVRGFHFPAILP DGSRG S S+ RH+ P QGS PLPIVCPSPAFTRDMQVLNKHAWHIPIG+GQD EP TKWLCINLAALVEEEEDGQ AE RPSEVIPRRKYRS
Sbjct: 218 DDHVSG---SSAGSGDHHLQTLLSAFNADSNFVSSESDVQTYFSSPPRVASVSSASLASGGVCDCCGAALKVVGLDPEARARVRSALVKLASETAYPTPXXXXXXXXXXXXXQSSRLDYAYAGEGQGEMDRRGLGEAMGDLERFAAWLEERRREGVHFTTVVDGCNVAYYGQNKEGGKFEISQVDLMARQLERDGERVLVILPERYLRPCVPNSARSRRGKNPSSALSDEDLETIDRWRRRQMLYSCANGTDDDLFWMYFTVSSDATAIEGEEEVTNGDGGAGLRENRQGYKPSNSNGVDGIYVGRQEATPRGGFAGGDDDETRLGGTGEGVGQXXXXXXXXXXXXSSGDGLAGRLTVVSNDEMRNHRMALLEPVPFKRWRKSQVRGFHFPAILPNDGSRGSSASSTXXXXXXXXXXXXXXXXXXXRHRPPEQGSSPPLPIVCPSPAFTRDMQVLNKHAWHIPIGEGQDGEPGTKWLCINLAALVEEEEDGQTAEQRPSEVIPRRKYRS 723
BLAST of mRNA_Ecto-sp13_S_contig13195.2591.1 vs. uniprot
Match: L1IRC9_GUITC (PRORP domain-containing protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1IRC9_GUITC) HSP 1 Score: 99.8 bits (247), Expect = 1.260e-19 Identity = 72/257 (28.02%), Postives = 109/257 (42.41%), Query Frame = 1
Query: 406 EAMGDLEQFAAWLEERGREGVHFTTVVDGCNVAYYGQNKEGGKFEISQVDLMARQLERNGERVLVILPERYLRPCVPNSARSRRGKNPSSA---LSDEDLETIDGWRQRHMLYSCANGTDDDLFWMYFTVSSDAAAIEGEVKVTNGDGGDGLRENRQGYKPSNSNGVDGIFVRGQEATLRGAFAGGDDETGLGGTGEDGGQGGERARTRTGVGSLGDGFAGRLTVVSNDEMRNHRMALLEPVPFKRWRKSQVRGFHF 1167
+A + F W+ E ++ F+ VVDG NVAY QN E G F Q+D++ +L GE+VLV+LP +Y++P +PN AR + N S+A ++ +++E ID W L +G++DD +WM TV EGE T+R VV+ND+MR+HR+ALL+P PF RW+ +++ F F
Sbjct: 9 QARESILNFLDWMRETSQQ---FSVVVDGPNVAYSKQNFETGCFSYHQIDIVVNKLREEGEKVLVLLPYKYVQPIIPNHARHQGHLNFSTAQHVVTGDEMEIIDRWNAEGCLKISPHGSNDDWYWMLSTVID-----EGE-------------------------------------TVR--------------------------------------------VVTNDQMRDHRLALLDPRPFLRWKTTRIIRFDF 176
BLAST of mRNA_Ecto-sp13_S_contig13195.2591.1 vs. uniprot
Match: A0A7S4QEE3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QEE3_9STRA) HSP 1 Score: 80.1 bits (196), Expect = 7.090e-13 Identity = 83/340 (24.41%), Postives = 123/340 (36.18%), Query Frame = 1
Query: 421 LEQFAAWLEERGREGVHFTTVVDGCNVAYYGQNKEGGKFEISQVDLMARQLERNGERVLVILPERYLRPCVPNSARSRRGKNPSSALSDEDLETIDGWRQRHMLYSCANGTDDDLFWMYFTVSSDAAAIEG---EVKVTNGDGGDGLRENRQGYKPSNSNGVDGIFVRGQEATLRGAFAGGDDETGLGGTGEDGGQGGERARTRTGVGSLGDGFAGRLTVVSNDEMRNHRMALLEPVPFKRWRKSQVRGFHFPAILPKDGSRGLSVSNGSRDSSADEDKGEKTSERERHKTPVQGSPSPLPIVCPSPAFTRDMQVLNKHAWHIPIGDGQDAEPSTKWLCI 1431
L F W+ R EG FT +VDG NVAY+GQ G + Q+ LM LE E LVI+P++Y +++ R L+ EDLE I+G+ ++ L+ DD +WM +VS + G +V N DG G +P ++SND+MR+H++ LLEP F+RW S + + SV N + S + +QG+P+P P + + AWH P+ D + E LCI
Sbjct: 49 LSNFVDWVNTR--EGEPFTAIVDGANVAYFGQ----GHVDYLQLKLMVETLENMNENPLVIMPQKY------TNSKFRVSSKFLQKLTPEDLEIIEGFEEKGQLFKVPALCLDDYYWMLASVSDQTVSRNGTNIDVPTDNDDG------RWPGIRPM--------------------------------------------------------------LISNDQMRDHKLELLEPRLFRRWCSSHIVNY--------------SVKNNKTEISF--------FAADFFSREIQGNPTPAPFSLSGQEESGNWAT----AWHFPVSDWDNHER----LCI 278
BLAST of mRNA_Ecto-sp13_S_contig13195.2591.1 vs. uniprot
Match: A0A7S0CK07_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CK07_9STRA) HSP 1 Score: 82.4 bits (202), Expect = 8.010e-13 Identity = 87/352 (24.72%), Postives = 131/352 (37.22%), Query Frame = 1
Query: 418 DLEQFAAWLEERGREGVHFTTVVDGCNVAYYGQNKEGGKFEISQVDLMARQLERNGERVLVILPERYLRPC--VPNSARSRRGKNPSSALSDEDLETIDGWRQRHMLYSCANGTDDDLFWMYFTVSSDAAAIEGEVKVTNGDGGDGLRENRQGYKPSNSNGVDGIFVRGQEATLRGAFAGGDDETGLGGTGEDGGQGGERARTRTGVGSLGDGFAG-RLTVVSNDEMRNHRMALLEPVPFKRWRKSQVRGFHFPAILPK---DGSRGLSVSNGSRDSSADEDKGEKTSERERHKTPVQGSPSPLPIVCPSPAFTRDMQVLNKHAWHIPIGDGQDAEPSTKWLCINLAALVEE 1455
+L FA WL R +G FT +VDG NVAY GQN E G+F Q+ + L GE LVI+P +Y N A+ RR L+D + + + +R LY DD +WM +VS KP+ GVD + V +G E ++ + + + F G R +++ND+MR+H++ LL+ F+RW + ++F A + D GLS + +QG+PS + AWH P+ D D E C+ + L E
Sbjct: 244 ELSTFADWLNVR--KGEPFTAIVDGANVAYSGQNFEQGRFNYHQIKFLTDALISMGENPLVIVPYKYTMKTFHTNNGAQKRR-----QILNDVEQDILFDFRDDGRLYRVPARCLDDYYWMLASVSDQ-------------------------LKPTGGKGVDMLHVSPNI------------------------EGNETDKSSNNINT--ERFPGTRPMLITNDQMRDHKLELLDTRLFRRWTSCHIVNYNFTAFVGNECVDNEIGLSTP-------------------DFFSREIQGNPSG-----------------DGTAWHFPVSDWGDNER----FCVRIPHLSSE 497
BLAST of mRNA_Ecto-sp13_S_contig13195.2591.1 vs. uniprot
Match: A0A7S2EEA5_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2EEA5_9STRA) HSP 1 Score: 80.1 bits (196), Expect = 6.660e-12 Identity = 83/342 (24.27%), Postives = 123/342 (35.96%), Query Frame = 1
Query: 421 LEQFAAWLEERGREGVHFTTVVDGCNVAYYGQNKEGGKFEISQVDLMARQLERNGERVLVILPERYLRPCVPNSARSRRGKNPSSALSDEDLETIDGWRQRHMLYSCANGTDDDLFWMYFTVSSDAAAIEG---EVKVTNGDGGDGLRENRQGYKPSNSNGVDGIFVRGQEATLRGAFAGGDDETGLGGTGEDGGQGGERARTRTGVGSLGDGFAGRLTVVSNDEMRNHRMALLEPVPFKRWRKSQVRGFHFPAILPKDGSRGLSVSNGSRDSSADEDKGEKTSERERHKTPVQGSPSPLPIVCPSPAFTRDMQVLNKHAWHIPIGDGQDAEPSTKWLCINL 1437
L F W+ R EG FT +VDG NVAY+GQ G + Q+ LM LE E LVI+P++Y +++ R L+ EDLE I+G+ + L+ DD +WM +VS + G +V N DG G +P ++SND+MR+H++ LLEP F+RW S + + SV N + S + +QG+P+P P ++ AWH P+ D + E LCI +
Sbjct: 477 LSNFVDWVNTR--EGEPFTAIVDGANVAYFGQ----GHVDYLQLKLMVETLENMNENPLVIMPQKY------TNSKFRVSSKFLQKLTPEDLEIIEGFEAKGQLFKVPALCLDDYYWMLASVSDQTVSRNGTNIDVPTDNDDG------RWPGIRPM--------------------------------------------------------------LISNDQMRDHKLELLEPRLFRRWCSSHIVNY--------------SVKNNKTEISF--------FAADFFSREIQGNPTPAPFSLSG----QEESGNGATAWHFPVSDWDNHER----LCIRI 708
BLAST of mRNA_Ecto-sp13_S_contig13195.2591.1 vs. uniprot
Match: A0A1Z5KPE3_FISSO (Ribonuclease P n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KPE3_FISSO) HSP 1 Score: 72.4 bits (176), Expect = 1.550e-9 Identity = 69/265 (26.04%), Postives = 105/265 (39.62%), Query Frame = 1
Query: 409 AMGDLEQFAAWLEERGREGVHFTTVVDGCNVAYYGQNKEGGKFEISQVDLMARQLERNGERVLVILPERYLRPCVPNSARSRRGKNPSSALSDEDLETIDGWRQRHMLYSCANGTDDDLFWMYFTV----SSDAAAIEGEVKVTNGDGGDGLRENRQGYKPSNSNGVDGIFVRGQEATLRGAFAGGDDETGLGGTGEDGGQGGERARTRTGVGSLGDGFAGRLTVVSNDEMRNHRMALLEPVPFKRWRKSQVRGFHFPAILPKDG 1191
A L QF+ WL++R +T +VDG NVAY+G G SQV + ++L+R GER LV++P++YL S G LSD+D ID + + +Y + DD +WM +V S+D A ++ ++ T + TGL R +++ND+MR+HR+ALLEP F+RW + + KDG
Sbjct: 400 AQEQLRQFSDWLKQRETS---YTAIVDGPNVAYFGH----GNVHYSQVWEVVQELQRLGERPLVVMPQKYLSRSFWLS-----GLGKVQELSDQDQAIID--KLKDCMYVVQSTCLDDYYWMIASVADQGSTDFATLQ------------------------------------KDQTFQ--------LTGL-----------------------------RPLLITNDQMRDHRLALLEPRLFRRWTSCHIVNYMLRTCEEKDG 577
BLAST of mRNA_Ecto-sp13_S_contig13195.2591.1 vs. uniprot
Match: A0A1Z5J5P3_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5J5P3_FISSO) HSP 1 Score: 71.6 bits (174), Expect = 2.710e-9 Identity = 66/262 (25.19%), Postives = 103/262 (39.31%), Query Frame = 1
Query: 409 AMGDLEQFAAWLEERGREGVHFTTVVDGCNVAYYGQNKEGGKFEISQVDLMARQLERNGERVLVILPERYLRPCVPNSARSRRGKNPSSALSDEDLETIDGWRQRHMLYSCANGTDDDLFWMYFTVSSDAAAIEGEVKVTNGDGGDGLRENRQGYKPSNSNGVDGIFVRGQEATLRGAFAGGDDETGLGGTGEDGGQGGERARTRTGVGSLGDGFAGRLTVVSNDEMRNHRMALLEPVPFKRWRKSQVRGFHFPAILPKDGS 1194
A L QF+ WL++R +T +VDG NVAY+G G SQV + ++L+R GER LV++P++YL S G L+D+D ID + + +Y + DD +WM +V+ + D + V+ + TGL R +++ND+MR+HR+ALLEP F+RW + + KDG+
Sbjct: 403 AQEQLRQFSDWLKQRETP---YTAIVDGPNVAYFGH----GNVHYSQVWEVVQELQRLGERPLVVMPQKYLSRSFWLS-----GLGKVQELNDQDQAIID--KLKDCMYVVPSTCLDDYYWMLASVAEQGS-------------------------------TDFVIVQQDQMFPL---------TGL-----------------------------RPLLITNDQMRDHRLALLEPRLFRRWTSCHIVNYMLRTCEEKDGN 581
BLAST of mRNA_Ecto-sp13_S_contig13195.2591.1 vs. uniprot
Match: A0A813CPS8_9DINO (Metalloendopeptidase n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813CPS8_9DINO) HSP 1 Score: 70.5 bits (171), Expect = 9.520e-9 Identity = 42/138 (30.43%), Postives = 68/138 (49.28%), Query Frame = 1
Query: 421 LEQFAAWLEERGREGVHFTTVVDGCNVAYYGQNKEGGKFEISQVDLMARQLERNGERVLVILPERYLRPCVPNSARSRRGKN----------PSSALSDEDLETIDGWRQRHMLYSCANGT----DDDLFWMYFTVSS 792
++F WLEE+ F V+DG NV + QN+EGG F+ SQ+D + ++L G RVL++L ++LR + R+ + SS S E+ E G Q ++ +G DD +W++ +SS
Sbjct: 782 FKRFKKWLEEQ----PPFDIVIDGANVGFNNQNREGGLFQYSQIDAVIKKLRETGSRVLLVLHPKWLRADADRTVTKRKKRKLDQINLESGLGSSDESAEEHEDESGMLQLDAVHKSDSGERVWEGDDWYWLFAALSS 915
BLAST of mRNA_Ecto-sp13_S_contig13195.2591.1 vs. uniprot
Match: B7G3U7_PHATC (Ribonuclease P n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G3U7_PHATC) HSP 1 Score: 68.6 bits (166), Expect = 2.630e-8 Identity = 44/134 (32.84%), Postives = 66/134 (49.25%), Query Frame = 1
Query: 391 RGGLGEAMGDLEQFAAWLEERGREGVHFTTVVDGCNVAYYGQNKEGGKFEISQVDLMARQLERNGERVLVILPERYLRPCVPNSARSRRGKNPSSALSDEDLETIDGWRQRHMLYSCANGTDDDLFWMYFTVSS 792
RG A +L +F+ WL E EG FT +VDG NVAY G G SQV L+ +LE GE+VLV++P +Y+ G + LS+ ++ ++G +Y DD +WM +V++
Sbjct: 454 RGDSERARRNLFEFSEWLREH--EGEPFTAIVDGANVAYAGH----GNVHYSQVQLVVDKLEDMGEKVLVVMPSKYV-----GEKFYVAGIDSVQQLSEREVGIMNGLLDEGKMYQVPAACLDDYYWMLASVAN 576
BLAST of mRNA_Ecto-sp13_S_contig13195.2591.1 vs. uniprot
Match: K0SEE8_THAOC (RNase NYN domain-containing protein (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SEE8_THAOC) HSP 1 Score: 66.2 bits (160), Expect = 1.660e-7 Identity = 59/241 (24.48%), Postives = 93/241 (38.59%), Query Frame = 1
Query: 457 REGVHFTTVVDGCNVAYYGQNKEGGKFEISQVDLMARQLERNGERVLVILPERYLRPCVPNSARSRRGKNPSSALSDEDLETIDGWRQRHMLYSCANGTDDDLFWMYFTVSSDAAAIEGEVKVTNGDGGDGLRENRQGYKPSNSNGVDGIFVRGQEATLRGAFAGGDDETGLGGTGEDGGQGGERARTRTGVGSLGDGFAGRLTVVSNDEMRNHRMALLEPVPFKRWRKSQVRGFHFPAIL 1179
R G FT ++DG NV YY Q+ + G+F Q++ M L GE LV++P +Y R R L E++ ++ + +Y DD +WM +VS +++ +G + S D FV G + RG F G R +V+ND+MR+H++ LLEP F+RW + + F A +
Sbjct: 564 RTGRPFTAIIDGANVGYYMQSFDKGRFNYHQINYMVETLIDRGENPLVVVPGKYGRE------RFHSSHGQVQRLDREEVAIMNRLAEEGRMYRVPPRCLDDFYWMLASVSDQSSSSS------------------RGPEDGPS---DLSFVPGDDP--RGRFPG-----------------------------------TRPMLVTNDQMRDHKLELLEPRLFRRWYGCHIVNYSFTAFV 740 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13195.2591.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig13195.2591.1 >prot_Ecto-sp13_S_contig13195.2591.1 ID=prot_Ecto-sp13_S_contig13195.2591.1|Name=mRNA_Ecto-sp13_S_contig13195.2591.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=380bp MDRGGLGEAMGDLEQFAAWLEERGREGVHFTTVVDGCNVAYYGQNKEGGKback to top mRNA from alignment at Ecto-sp13_S_contig13195:254..4649- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig13195.2591.1 ID=mRNA_Ecto-sp13_S_contig13195.2591.1|Name=mRNA_Ecto-sp13_S_contig13195.2591.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4396bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13195:254..4649- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig13195:254..4649- >mRNA_Ecto-sp13_S_contig13195.2591.1 ID=mRNA_Ecto-sp13_S_contig13195.2591.1|Name=mRNA_Ecto-sp13_S_contig13195.2591.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1140bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13195:254..4649- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |