mRNA_Ecto-sp13_S_contig13166.2567.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig13166.2567.1 vs. uniprot
Match: D8LIB1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIB1_ECTSI) HSP 1 Score: 457 bits (1177), Expect = 4.420e-161 Identity = 226/231 (97.84%), Postives = 229/231 (99.13%), Query Frame = 1
Query: 1 LKERRKAPAEVRFSIGSADDVLTEQLKTGDVLLFSRRWTQMLPAGAALSVMKRSVFDSRFDHAGVVVADRFGTPHVAEVTYTGIKLRRFDERILRSKCNEIMLIPVNFKCSEETRAKVERHVKGLTYREPIANTLWIDLLGVLKLRTTKPGEWDKPPKYVTEPPIIGKIVPASPAVQLVMSCLDIAGAADGAAVAEWKYPLAITPKDLENCEVPLKQGANFGEPHTVRVRQ 693
LKERRKAPAEVRFSIGSADDVLTEQLKTGDVLLFSRRWTQMLPAGAALSVMKRSVFDSRFDHAGVVVADRFGTPHVAEVTYTGIKLRRFDERILRSKCNEIMLIPVNFKCSEETRAKVERHVKGLTYREPIANTLWIDLLG LKL+TTKPGEW KPPKYVTEPPIIGKIVPASPAVQLVMSCLD+AGAADGAAVAEWKYPLAITPKDLENCEVPLK+GANFGEPHTVRVRQ
Sbjct: 35 LKERRKAPAEVRFSIGSADDVLTEQLKTGDVLLFSRRWTQMLPAGAALSVMKRSVFDSRFDHAGVVVADRFGTPHVAEVTYTGIKLRRFDERILRSKCNEIMLIPVNFKCSEETRAKVERHVKGLTYREPIANTLWIDLLGALKLKTTKPGEWGKPPKYVTEPPIIGKIVPASPAVQLVMSCLDMAGAADGAAVAEWKYPLAITPKDLENCEVPLKEGANFGEPHTVRVRQ 265
BLAST of mRNA_Ecto-sp13_S_contig13166.2567.1 vs. uniprot
Match: A0A835ZIB1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZIB1_9STRA) HSP 1 Score: 148 bits (373), Expect = 2.210e-39 Identity = 94/246 (38.21%), Postives = 137/246 (55.69%), Query Frame = 1
Query: 4 KERRKAPAEVRFSIGSADDVLTEQLKTGDVLLFSRRWTQMLPAGAALSVMKRSVFDSRFDHAGVVVADRFGTPHVAEVTYTGIKLRRFDERILRSKCNEIMLIPVNFKCSEETRAKVERHVKGLTYREPIA-----NTLWIDLLGVLKL---------RTTKPGEWDKPPKYVTEPPIIGKIVPASPAVQLVMSCLDIAGAADGAAVAEWKYPLAI-TPKDLENCEVPLKQGANF--GEPHTVRVR 690
+ERRK PA F +GS DD+L ++LKTGD+LLF R W M P AAL++ R+VF++R+DH G+V+ DRFG P V EVT G++LRRFDER+ S+ +EI+ +P+ +E R K ER+ + LT +A ++ +L G+LK R T P + + G+ + AS LV++ LD G D AAV P + +P+DL +PL G + G+ VR+R
Sbjct: 27 QERRKPPANTDFVVGSTDDILADKLKTGDLLLFRRNWALMQPPAAALALAARAVFNTRYDHVGLVIKDRFGVPLVLEVTQLGLRLRRFDERVSWSRSDEIVALPLRAAPPDEARVKAERYARSLTPERRLAWAQPSQSMSAELAGLLKYWLANRAARRRGTSP-----------DAKLWGEGLVASRDAALVLATLDKMGLVDLAAVEREVAPAQLLSPRDLVEGRLPLTGGNAYLAGQELLVRLR 261
BLAST of mRNA_Ecto-sp13_S_contig13166.2567.1 vs. uniprot
Match: A0A7S3XLF3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XLF3_HETAK) HSP 1 Score: 80.5 bits (197), Expect = 9.170e-14 Identity = 62/235 (26.38%), Postives = 100/235 (42.55%), Query Frame = 1
Query: 19 APAEVRFSIGSADDVLTEQLKTGDVLLFSRRWTQMLPAGAALSVMKRSVFDSRFDHAGVVVADRFGTPHVAEVTYTGIKLRRFDERILRSKCNEIMLIPVNFKCSEETRAKVERHVKGLTYREPIANTLWIDLLGVLKLRTTKPGEWDKPPKYVTEPPIIGKIVPASPAVQLVMSCLDIAGAADGAAVAEWKYPLAITPKDLENCEVPLKQGANFGEPHTVRVRQ*YDVGRVVHH 723
+P + F+I S D L+TGD++ F R + P LS + + FD GV++ DR+GTPHV E +++GI L R+D RI S EI+L+P+ + S E++ K R + L + A I+ ++ + T T+ + ++P L+M+ L E K L + E C P +P V + RV H+
Sbjct: 33 SPDSLEFNIASIDAQFMNTLRTGDIIFFRRNPFMLQPLQGILSWATKLLTGCDFDQCGVILNDRYGTPHVFEFSHSGITLTRYDHRIKLSMAEEIVLLPLIPESSSESKTK--RLTEQLERAKKAAVRAQIEQTAFIRAQAT-----------TTDNSMTPAVIPWFHLNGLMMASL-----------LELKKTLGLVEGSTEPCSTPFAHNKKTKDPKEVFISGQSGQQRVYHY 243
BLAST of mRNA_Ecto-sp13_S_contig13166.2567.1 vs. uniprot
Match: A0A6G0WTL4_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WTL4_9STRA) HSP 1 Score: 75.9 bits (185), Expect = 1.760e-12 Identity = 40/123 (32.52%), Postives = 66/123 (53.66%), Query Frame = 1
Query: 7 ERRKAPAEVRFSIGSADDVLTEQLKTGDVLLFSRRWTQMLPAGAALSVMKRSV--FDSRFDHAGVVVADRFGTPHVAEVTYTGIKLRRFDERILRSKCNEIMLIPVNFKCSEETRAKVERHVK 369
+ + P F GS DDV+++ LKTGD++LF R M P + V + S+F+H G ++ + G V E TY+G+K R + RIL S +I+++P+ K ++E A + V+
Sbjct: 31 QAKNPPRGYNFITGSMDDVMSDTLKTGDLILFRRNCAYMQPMDGLGCFLTSQVDQWKSQFNHCGFILVNHVGDKFVVEETYSGVKCRPYSARILTSLSTDIVVVPLRVKRTKEMEAAAAQFVQ 153
BLAST of mRNA_Ecto-sp13_S_contig13166.2567.1 vs. uniprot
Match: A0A485K7A3_9STRA (Aste57867_325 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485K7A3_9STRA) HSP 1 Score: 74.3 bits (181), Expect = 6.240e-12 Identity = 62/227 (27.31%), Postives = 100/227 (44.05%), Query Frame = 1
Query: 22 PAEVRFSIGSADDVLTEQLKTGDVLLFSRRWTQMLPAGAALSVMKRSV--FDSRFDHAGVVVADRFGTPHVAEVTYTGIKLRRFDERILRSKCNEIMLIPVNFKCSEETRAK--VERHVKGLTYREPIANTLWIDLLGVLKLRTTKPGEWDKPPKYVTEPPIIGKIVPASPAVQLVMSCLDIAGAADGAAVAEWKYPLAITPKDLEN-CEVPLKQGANFGEPHTVRV 687
P + F+ GS DD++++ LKTGD++LF R M P AA + V + S+++H G + + G + E TY+G+K R + RIL S +I+++P+ E AK +E +V + R ++N L + T PG K P PA L+ G ++ + + P T KD V L Q A+F +R+
Sbjct: 36 PRGLTFNTGSMDDIMSDTLKTGDLVLFRRNCAYMQPLDAASCFLTGKVESWKSQYNHCGFIFVNHIGDKFIVEETYSGVKCRPYSARILTSMSTDIVVVPLRRTKEMELAAKQFIEENVNRPS-RFSLSNVLE---------QLTSPGA------------SADKSTPIFPAAGLIAEVYQRMGLLPESSSSGYLSPNKCTIKDWSQFARVKLLQDAHFDRRLQIRL 240
BLAST of mRNA_Ecto-sp13_S_contig13166.2567.1 vs. uniprot
Match: A0A7S3HD07_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HD07_9STRA) HSP 1 Score: 74.3 bits (181), Expect = 6.910e-12 Identity = 39/105 (37.14%), Postives = 64/105 (60.95%), Query Frame = 1
Query: 10 RRKAPAEVRFSIGSADDVLTEQLKTGDVLLFSRRWTQMLPAGAALSVMKRSVFDSRFDHAGVVVADRFGTPHVAEVT-YTGIKLRRFDERILRSKCNEIMLIPVN 321
+R E F GSADD++ + L++GDV+LFSR+W A L + + + +DH+G++V + GTP+V E T G++ RRF+ERI S + I+++ +N
Sbjct: 36 KRFVGIEPEFRQGSADDMVADSLRSGDVVLFSRKWYNYHLPTALLVKAQEAFYGGEYDHSGIIVM-KAGTPYVLETTPIRGVQCRRFEERIRHSASSHIVVLTLN 139
BLAST of mRNA_Ecto-sp13_S_contig13166.2567.1 vs. uniprot
Match: W4FI40_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FI40_9STRA) HSP 1 Score: 72.8 bits (177), Expect = 2.270e-11 Identity = 39/116 (33.62%), Postives = 63/116 (54.31%), Query Frame = 1
Query: 37 FSIGSADDVLTEQLKTGDVLLFSRRWTQMLPAGAALSVM--KRSVFDSRFDHAGVVVADRFGTPHVAEVTYTGIKLRRFDERILRSKCNEIMLIPVNFKCSEE----TRAKVERHV 366
F+ GS DD+L++ L+TGD++LF R M PA A + + ++ ++H G + + G V E TY+G+K R + RI+ S +I ++P+ K + E R VE HV
Sbjct: 41 FNTGSMDDILSDTLQTGDIVLFRRNCAYMQPADAVSCFLGDRVPIWQGPYNHCGFIYVNHIGDKFVVEETYSGVKCRPYSARIITSLSTDIAVVPLRVKRTPEMQMAVRDFVEEHV 156
BLAST of mRNA_Ecto-sp13_S_contig13166.2567.1 vs. uniprot
Match: M1VD17_CYAM1 (Similar to mitochondrial calcium-dependent solute carrier n=1 Tax=Cyanidioschyzon merolae (strain NIES-3377 / 10D) TaxID=280699 RepID=M1VD17_CYAM1) HSP 1 Score: 73.9 bits (180), Expect = 5.870e-11 Identity = 46/150 (30.67%), Postives = 77/150 (51.33%), Query Frame = 1
Query: 25 AEVRFSIGSAD------DVLTEQLKTGDVLLFSRRWTQMLPAGAALSVMKRSVFDSRFDHAGVVVADRFGTPHVAEVTYTGIKLRRFDERILRSKCNEIMLIPVNFKCSEETRAKVERHVKGLTYREPIANTLWIDLLGVLKLRTTKPGE 456
++VR S G + L L GD++LF+RR M P GA + + +++ +SR+DH G+VV G+ H+ E +G+ LR DERI RS+ NEI ++ +E R ++ L + E + T + + LG + + P +
Sbjct: 69 SQVRSSTGGTELKRERRVTLPPGLDAGDIVLFNRRCLAMAPLGALICAVAKAMSNSRWDHVGIVVRKEDGSLHLLEANLSGVTLRPLDERIRRSRSNEIAFRRLSIIRTERFRTEL------LHFAEQVLETPYKNDLGAMLVSVIHPAD 212
BLAST of mRNA_Ecto-sp13_S_contig13166.2567.1 vs. uniprot
Match: A0A024U754_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U754_9STRA) HSP 1 Score: 70.9 bits (172), Expect = 1.080e-10 Identity = 37/118 (31.36%), Postives = 63/118 (53.39%), Query Frame = 1
Query: 22 PAEVRFSIGSADDVLTEQLKTGDVLLFSRRWTQMLPAGAALSVMKRSV--FDSRFDHAGVVVADRFGTPHVAEVTYTGIKLRRFDERILRSKCNEIMLIPVNFKCSEETRAKVERHVK 369
P F+ GS DD++++ L+TGD++LF R M PA A + V + ++H G + + G V E TY+G+K R + RI+ S +I+++P+ K + E + V V+
Sbjct: 36 PRGFTFNTGSMDDIMSDTLQTGDIVLFRRNCAFMQPADALSCFLADHVPSWQGPYNHCGFIYVNHIGDKFVVEETYSGVKCRPYSARIITSLSTDIVVVPLRVKRTPEMQNSVRDFVE 153
BLAST of mRNA_Ecto-sp13_S_contig13166.2567.1 vs. uniprot
Match: A0A7J7IKN1_9RHOD (Uncharacterized protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IKN1_9RHOD) HSP 1 Score: 72.8 bits (177), Expect = 1.380e-10 Identity = 40/118 (33.90%), Postives = 64/118 (54.24%), Query Frame = 1
Query: 76 LKTGDVLLFSRRWTQMLPAGAALSVMKRSVFDSRFDHAGVVVADRFGTPHVAEVTYTGIKLRRFDERILRSKCNEIMLIPVNFKCSEETRAKVERHVKGLTYREPIANTLWIDLLGVL 429
L GD++LF+RR M P GA + + +++ +SR+DH G+VV G+ H+ E +G+ LR DERI RS+ NEI ++ ++ R ++E H P N L+ V+
Sbjct: 90 LDAGDIVLFNRRCLAMAPLGALICAVAKAMSNSRWDHVGIVVRKEDGSLHLLEANLSGVTLRPLDERIRRSRSNEIAFRRLSIVRTDRFRRELE-HFAEQVLETPYKNDFGAMLVSVI 206 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13166.2567.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 14
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig13166.2567.1 >prot_Ecto-sp13_S_contig13166.2567.1 ID=prot_Ecto-sp13_S_contig13166.2567.1|Name=mRNA_Ecto-sp13_S_contig13166.2567.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=192bp MLPAGAALSVMKRSVFDSRFDHAGVVVADRFGTPHVAEVTYTGIKLRRFDback to top mRNA from alignment at Ecto-sp13_S_contig13166:4..4806- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig13166.2567.1 ID=mRNA_Ecto-sp13_S_contig13166.2567.1|Name=mRNA_Ecto-sp13_S_contig13166.2567.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4803bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13166:4..4806- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig13166:4..4806- >mRNA_Ecto-sp13_S_contig13166.2567.1 ID=mRNA_Ecto-sp13_S_contig13166.2567.1|Name=mRNA_Ecto-sp13_S_contig13166.2567.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=576bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13166:4..4806- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |