mRNA_Ecto-sp13_S_contig1316.2564.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig1316.2564.1
Unique NamemRNA_Ecto-sp13_S_contig1316.2564.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig1316.2564.1 vs. uniprot
Match: D8LQ08_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ08_ECTSI)

HSP 1 Score: 1402 bits (3630), Expect = 0.000e+0
Identity = 787/999 (78.78%), Postives = 812/999 (81.28%), Query Frame = 1
Query:    1 MGKLNSFIKFVVFNANALLFLGGVGIVIVASLLLAADFIKLAQTYMHTLGIITLMVGILVAAMSVIGCIGTNRQIERDRLWSGRRILSLYQLILVAVVVGQGVVQMRLYSIEVSLEEAAADLPNQHGEFEGRFREGFNEAYFEQLCSASAGGDSWVWSLVEDHCPDAISRDVCSCSDILDGSGLPGGCSTPETYSAEGCCPDEEFCEAGKEEACPYAACRTGILEVLLSYITPARRYSTFVFVLEGMVLILTCLLICYNPRDSTEDILIKTGTIMRQHHKPGEGGGGEPGSQAGDLEGTPGGAKNPAGASIHALRLDLVQPAGAARRAGXXXXXXXXGGSPGRSTPAMSPMAVENIPTEPLSQFLTPRRGGNRITYGPDSGGGDDGETYEYQNPRKGKSAAVGPPRAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVARLLPGAAPSRRHGEEKRSQERNHSYDXXXXXXXXXXXXXDDHGCEGIMADMTPVSAAAGVDSDGREFYQRLGAQTPAAQYGGXXXXXXXXIFATSRTSPTPTGAASPLDSTRFLTETSSVRATAASRYFPHGGGGSFQVPQSPITPAFPGSSDNGNAEKLLRLDGQTNILTSPMSADVPTSSGGGERTVVPSSSGLSSNPRLLSQQTPVTSPRGGLPPTYQEHTDTVGNAAHSGSPAFAGHSAGGDSPVGDPTGLAASLANALLARANAGDGASPTNISENQQQEEEAGNTGPSSTPAGVLKGLMTQTPPGGVSPARPERTRLQRQLSGSAAYPRSGSDLSPELSARGTPFQVADLPEEEEEE--------TPSPLPVVEPAAKSLLQVQMSTAGEGSRMFLGQTPITLSNADATRLYESTVSTDTVPMTAAGATGXXXXXXXXXXXXXXXXXXXXXXXXPVVEDGAPSPVVEPPDQARASPP-DIPLNTKLTNGVEEPAVIAGRTPSDGPTSDDATTPASATAAAPLPSAKPPSRFARFLAKAL 2970
            MGKLNSFIKFVVFNANALLFLGGVGIVIVASLLLAADFIKLAQTYM TLGIIT+MVGILVAAMS+IGC+GTNRQIERDRLWSGRRILSLYQLILVAVVVGQGVVQMRLYSIEVSLEEAAADLP QHGEFEGRFREGFNEAYFEQLCSASAGGDSWVWSLVEDHCPDAISRD CSCSDILDGSGLP  CSTPETYSAEGCCPDEEFCEAGKEEACPYA CRTGILEVLLSYITPAR+YSTFVFVLEGMVLILTCLLICYNPRDSTEDILIKTGTIMRQHHKPGEGGGGEP SQ GDLEG PGGAKNPAGASIHALRLDLVQPAGA RRAG        GGSP R+TPAMSPMAVENIPTEPLSQFLTP+RGGNRITYGPDSGG DDGETYEYQNPRK  ++A    RA                                              ARLLPGAAPSRRHGEEKRSQERNHSYD             ++HGC GIMADMTPVSAAAG ++DG EFYQ+LGAQTPAA YG XXXXXXX +FATSRTSPTPTGAAS LD TRFLT TSSV+ATAASRYFPHGGGGSFQVPQSPITP  PG +D+GNAEK  RL+GQTNILTSPMSADVPTS GG +RTVVPSSSGLSSNP LLSQQTPV SPRGGLPPTYQEHTD VGNAAHSG PA AGHSAGGDS VGDPTGL ASLANALLARANAGDGASPTN SENQ          PSSTPAG LKGLMTQTPPGG SPARPER  LQR+ SGSAAYPRSGSDLSP LSARGT FQ AD PEE            T S LPVVEPAAKSL QV+MST GEGSRMFL QTPITLSNAD TRLYES VSTDTVP+TAAGA                          PVVED  PSP VEP +QARASPP   PLNT LTNG +EPAV+AG   SDGPTSDDATTPASATAAAPLPSAKP SRFARFL KAL
Sbjct:    1 MGKLNSFIKFVVFNANALLFLGGVGIVIVASLLLAADFIKLAQTYMQTLGIITMMVGILVAAMSIIGCVGTNRQIERDRLWSGRRILSLYQLILVAVVVGQGVVQMRLYSIEVSLEEAAADLPIQHGEFEGRFREGFNEAYFEQLCSASAGGDSWVWSLVEDHCPDAISRDACSCSDILDGSGLPARCSTPETYSAEGCCPDEEFCEAGKEEACPYAPCRTGILEVLLSYITPARKYSTFVFVLEGMVLILTCLLICYNPRDSTEDILIKTGTIMRQHHKPGEGGGGEPDSQVGDLEGAPGGAKNPAGASIHALRLDLVQPAGAVRRAGAAGKRGAAGGSPDRATPAMSPMAVENIPTEPLSQFLTPKRGGNRITYGPDSGGEDDGETYEYQNPRKATASAPEGSRAAQDKRQHGAGAAAIAAVPTL-------------------------AARLLPGAAPSRRHGEEKRSQERNHSYDSSGSADGEEEKKRENHGCGGIMADMTPVSAAAGDENDGSEFYQKLGAQTPAAHYGXXXXXXXXDLFATSRTSPTPTGAASRLDPTRFLTNTSSVQATAASRYFPHGGGGSFQVPQSPITPELPGGNDSGNAEKPPRLEGQTNILTSPMSADVPTSIGGEKRTVVPSSSGLSSNPCLLSQQTPVASPRGGLPPTYQEHTDAVGNAAHSGRPASAGHSAGGDSSVGDPTGLVASLANALLARANAGDGASPTNDSENQXXXXXXXXNDPSSTPAGFLKGLMTQTPPGGASPARPERRTLQRRPSGSAAYPRSGSDLSPVLSARGTLFQAADFPEEXXXXXXXXXXXXTLSQLPVVEPAAKSLPQVEMSTPGEGSRMFLAQTPITLSNADVTRLYESNVSTDTVPITAAGAPDGGAGGEEKTSDTTFGRKASTSEQQPVVEDEVPSPAVEPANQARASPPGSSPLNTTLTNGGKEPAVVAGGALSDGPTSDDATTPASATAAAPLPSAKPQSRFARFLEKAL 974          
BLAST of mRNA_Ecto-sp13_S_contig1316.2564.1 vs. uniprot
Match: A0A6H5JEQ5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEQ5_9PHAE)

HSP 1 Score: 955 bits (2469), Expect = 0.000e+0
Identity = 606/759 (79.84%), Postives = 621/759 (81.82%), Query Frame = 1
Query:  739 MVLILTCLLICYNPRDSTEDILIKTGTIMRQHHKPGEGGGGEPGSQAGDLEGTPGGAKNPAGASIHALRLDLVQPAGAARRAGXXXXXXXXGGSPGRSTPAMSPMAVENIPTEPLSQFLTPRRGGNRITYGPDSGGGDDGETYEYQNPRKGKSAAVGPPRAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXP------------VARLLPGAAPSRRHGEEKRSQERNHSYDXXXXXXXXXXXXXDDHGCEGIMADMTPVSAAAGVDSDGREFYQRLGAQTPAAQYGGXXXXXXXXIFATSRTSPTPTGAASPLDSTRFLTETSSVRATAASRYFPHGGGGSFQVPQSPITPAFPGSSDNGNAEKLLRLDGQTNILTSPMSADVPTSSGGGERTVVPSSSGLSSNPRLLSQQTPVTSPRGGLPPTYQEHTDTVGNAAHSGSPAFAGHSAGGDSPVGDPTGLAASLANALLARANAGDGASPTNISENQQQEEEAGNTGPSSTPAGVLKGLMTQTPPGGVSPARPERTRLQRQLSGSAAYPRSGSDLSPELSARGTPFQVADLPEEEEEETPSPLPVVEPAAKSLLQVQMSTAGEGSRMFLGQTPITLSNADATRLYESTVSTDTVPMTAAGATGXXXXXXXXXXXXXXXXXXXXXXXX---PVVEDGAPSPVVEPPDQARASPPDIPLNTKLTNGVEEPAVIAGRTPSDGPTSDDATTPASATAAAPLPSAKPPSRFARFLAKAL 2970
            MVLILTCLLICYNPRDSTEDILIKTGTI+RQ HKPGE GG EPGSQAGDLEGTPGGAKNPAGASIHALRLDLVQPAGAARRAG        GGSP RSTPAMSPMAVEN        FLTPRRGGNRITYGPDS GGDDGETY YQNPRKGKSAAVGPPRAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX             VARLLPGAAPSRRHGEEKRS ERNHSYD             DDHGC GIMADM PVSA AG ++DG +FYQ+LGAQTPAAQYGGXXXXXXX IFATSRTSPTPTGAA PLD TRFL  TS V+ATAASRYFPHG GGSFQVPQSP TP  PG +DNGNAEK LRLDGQTNILTSP  ADVPTSSG  ERTVVPSSSGL+SNP LLSQQTPV SPRGGLPPTYQEHTD VGNAA SGSPA  GHSA GDS VGD TGL ASLANALLARANAGDGASPTN SENQQQEEEAG   PSSTPA +LKGLMTQTPPGGVSPARPER  LQRQ SGSAAYPRSGSDLSP   ARGT FQVAD PEEEEEETPSPLPVVE  AKSL QV+MSTA EGSRM LGQTPITLSNADATRLYES +STDTVP+TAA A G                           PVVEDGAPSPVVEP DQARASPP IPLNT LTNGVEEPAV+AG TPSDGP SDDATT ASATAAAP PS KP SRF+RF+ KAL
Sbjct:    1 MVLILTCLLICYNPRDSTEDILIKTGTIVRQQHKPGERGGEEPGSQAGDLEGTPGGAKNPAGASIHALRLDLVQPAGAARRAGAVGKRGAAGGSPDRSTPAMSPMAVEN--------FLTPRRGGNRITYGPDSDGGDDGETYAYQNPRKGKSAAVGPPRAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVARLLPGAAPSRRHGEEKRSHERNHSYDSSSSADGEEEKKRDDHGCGGIMADMRPVSAGAGDENDGSDFYQKLGAQTPAAQYGGXXXXXXX-IFATSRTSPTPTGAAPPLDPTRFLAGTSLVQATAASRYFPHGDGGSFQVPQSPKTPELPGGNDNGNAEKSLRLDGQTNILTSPKPADVPTSSGVEERTVVPSSSGLTSNPCLLSQQTPVASPRGGLPPTYQEHTDAVGNAARSGSPASEGHSASGDSSVGDTTGLVASLANALLARANAGDGASPTNGSENQQQEEEAGKNDPSSTPAVLLKGLMTQTPPGGVSPARPERKTLQRQPSGSAAYPRSGSDLSPVPFARGTLFQVADFPEEEEEETPSPLPVVEATAKSLPQVEMSTAVEGSRMLLGQTPITLSNADATRLYESNISTDTVPITAAEAAGAPDGGAGDEEKTSDITSGRKASTSEQQPVVEDGAPSPVVEPADQARASPPYIPLNTTLTNGVEEPAVVAGGTPSDGPNSDDATTTASATAAAPRPSTKPQSRFSRFVEKAL 750          
BLAST of mRNA_Ecto-sp13_S_contig1316.2564.1 vs. uniprot
Match: A0A812W7H9_SYMMI (Hypothetical protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812W7H9_SYMMI)

HSP 1 Score: 160 bits (406), Expect = 3.280e-40
Identity = 93/285 (32.63%), Postives = 158/285 (55.44%), Query Frame = 1
Query:    1 MGKLNSFIKFVVFNANALLFLGGVGIVIVASLLLAADFIKLAQTYMHTLGIITLMVGILVAAMSVIGCIGTNRQIERDRLWSGRRILSLYQLILVAVVVGQGVVQMRLYSIEVSLEEAAADLPN-----QHGEFEGRFREGFNEAYFEQLCSASAGGDSWVWSLVEDHCPDAISRDVC-SCSDILDGSGLPGGCSTPETYSAEGCCPDEEFC--EAGKEEACPYAACRTGILEVLLSYITPARRYSTFVFVLEGMVLILTCLLICYNPRDSTEDILIKTGTIMRQ 831
            MG+LN+ IK++V N N +     +  +I+A L++ +D+  L + +     I+ ++  +L+  +S++GC+G + Q E+   W+GRRIL+LYQL L+A ++G   +  +L  +   L+   +DL +      +G FE    + FNE +F    + +    +W WS V+DHCP +I +  C +C D                YS   C  DE+ C  ++G  + CPY  CR G+L+ L+SY+ P       + V +  +++LTC+LICY P+D+ E +L+KTGTI  +
Sbjct:    1 MGRLNNMIKWLVMNVNLIYAAVALVSIILAVLVMVSDWGSLDRGFFLGWCIVVILFSVLILMISLLGCMGVSHQSEQLSCWTGRRILALYQLSLLATIIGNLWMVTKLIILVRGLDATYSDLTSADDTVDYGRFEEAVADRFNEFFFSAAATCTDSKYAWFWSWVDDHCPVSIGQARCMACGD----------------YSVTTCPADEDLCYAQSGGMDKCPYDQCRAGVLDYLISYMEPLNVALLVIAVFQLCIMVLTCMLICYTPQDTVEQMLVKTGTISEK 269          
BLAST of mRNA_Ecto-sp13_S_contig1316.2564.1 vs. uniprot
Match: W7U843_9STRA (Tetraspanin n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U843_9STRA)

HSP 1 Score: 132 bits (331), Expect = 2.830e-29
Identity = 98/285 (34.39%), Postives = 144/285 (50.53%), Query Frame = 1
Query:    1 MGKLNSFIKFVVFNANALLFLGGVGIVIVASLLLAADFIKLAQTYMHTLGII--TLMVGILVAAMSVIGCIGTNRQIERDRLWSGRRILSLYQLILVAVVVG--QGVVQMRLYSIEVSLEEAAADLPNQHGEFEGRFREGFNEAYFEQLCSA------SAGGDSWVWSLVEDHCPDAISRDVCSCSDILDGSGLPGGCSTPETYSAEGCCPDEEFCEAGKEEACPYAACRTGILEVLLSYITPARRYSTFVFVLEGMVLILTCLLICYNPRDSTEDILIKTGTIM 825
            +  LN  IKFVV  +N    + G+ +  +A+ L  A  +        T G I  T++VG+ +  +S +GC G  RQI R     GRR+LSLYQL+L+ ++       + MR    +V L     D      E +      FN  YF+   +A       AG  +W        CP  +S DV +C+    G+   GG S P T   +GCCP ++ C AG  +ACPY  CR G+   L   +   ++Y  F+ +L+ +VLI TC+LICYNPRDS  ++L KTG ++
Sbjct:   49 VNMLNDNIKFVVSTSNTCFCIAGLVLGGLAAYLYYATSLAAVTLTSLTQGWIMWTMLVGLGLVFLSCLGCFGVKRQIVRVGPCGGRRLLSLYQLLLLGLLFAFTTAFLAMRTLHTQVPLLLDNPDAVYARSE-QNLLVPYFNRLYFKTRKAAVRAHDGGAGSFNWFADWTRQSCP--LSMDVGTCTSC--GTDGDGGTSVPYT---DGCCPRDDLCTAGNLDACPYHRCRLGVARFLSKRLGALQKYLNFLLILQLIVLISTCMLICYNPRDSFAELLAKTGVVI 325          
BLAST of mRNA_Ecto-sp13_S_contig1316.2564.1 vs. uniprot
Match: K0TPL8_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TPL8_THAOC)

HSP 1 Score: 120 bits (302), Expect = 1.770e-26
Identity = 80/231 (34.63%), Postives = 118/231 (51.08%), Query Frame = 1
Query:  154 ITLMVGILVAAMSVIGCIGTNRQIERDRLWSGRRILSLYQLILVAVVVGQGVVQMRLYSIEVSLEEAAADLPNQHGEFEGRFREGFNEAYFEQLCSA--SAGGDSWVWSLVEDHCPDAISRDVCSCS----DILDGS--GLPGGCSTPETYSAEGCCPDEEFCEAGKEEACPYAACRTGILEVLLSYITPARRYSTFVFVLEGMVLILTCLLICYNPRDSTEDILIKTGTI 822
            I L++ + V   S  GC G  RQ +R   ++GR+IL L+QL+L+AV+V           +  S+     D    +  FE R    F+  YF+ LCS+  S  GD W+   V  +CP  +    C+ S    D+ D +   L G     + +   GCCP +E C++G E ACPY  CR  I   L  ++ PA+  +       G++++L+ LLICYNPRDS E  L KTG +
Sbjct:    6 IALLLSLSVLFCSFYGCNGALRQTKRKGCFAGRKILCLHQLLLIAVLVFAFANLEWTTKLHRSVRSFLRDPSQDYNGFEERLSVFFDGEYFKSLCSSNDSTAGD-WLEKFVSANCPQQMKPTACALSGRKRDMCDTTCYALQGD---TDRFQELGCCPSKELCQSGFESACPYDMCRLEIFHELSKFVGPAKVSAQASVAASGLMIVLSILLICYNPRDSIEIELYKTGVL 232          
BLAST of mRNA_Ecto-sp13_S_contig1316.2564.1 vs. uniprot
Match: A0A7S2G7W8_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G7W8_9STRA)

HSP 1 Score: 110 bits (274), Expect = 1.040e-22
Identity = 75/278 (26.98%), Postives = 128/278 (46.04%), Query Frame = 1
Query:   10 LNSFIKFVVFNANALLFLGGVGIVIVASLLLAADFIKLAQTYMHTLGIITLMVGILVAAMSVIGCIGTNRQIERDRLWSGRRILSLYQLILVAVVVGQGVVQMRLYSIEVSLEEAAADLPN-------QHGEFEGRFREGFNEAYFEQLCSASAGGDSWVWSLVEDHCPDAISRDVCSCSDILDGSGLPGGCSTPETYSAEGCCPDEEFCEAGKEEACPYAACRTGILEVLLSYITPARRYSTFVFVLEGMVLILTCLLICYNPRDSTEDILIKTGTI 822
            LN  +KF  F  N++  L GV ++ ++   L   +  L      +   I +  G+++  + + GC G   Q +R     GRR+LS YQ+ L+ ++  Q    + + +   SL+    +L +       ++ + E      FN+ YF+ +  +    D + W  V++ CP +              SG+       ++Y+    CPDE  C+ G    CPY  CR   +   L  + P   Y  FV + E  ++ILTC LIC+NPRD+ + IL+K+G  
Sbjct:   25 LNGLLKFFFFIVNSMYCLVGVALIGLSIYCLTDAWADLDPDIYRSAATILISTGVVILIIVMCGCFGAVYQEQRTGSCRGRRLLSFYQICLLTLIGLQFYTTVYMLNTAESLQAVKGELASAKSNVTVEYVDAERSLSTKFNDYYFDTVTGSQ---DGYFWKFVDESCPKS--------------SGMGSDDCNVDSYATT--CPDEASCDDGASAQCPYDLCRRAAVTRFLGIVEPIGEYGIFVCIFETALMILTCCLICFNPRDAEQTILMKSGNF 283          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1316.2564.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D8LQ08_ECTSI0.000e+078.78Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JEQ5_9PHAE0.000e+079.84Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A812W7H9_SYMMI3.280e-4032.63Hypothetical protein n=1 Tax=Symbiodinium microadr... [more]
W7U843_9STRA2.830e-2934.39Tetraspanin n=1 Tax=Nannochloropsis gaditana TaxID... [more]
K0TPL8_THAOC1.770e-2634.63Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
A0A7S2G7W8_9STRA1.040e-2226.98Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1316contigEcto-sp13_S_contig1316:2188..11601 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score1416.7
Seed ortholog evalue0.0
Seed eggNOG ortholog2880.D8LQ08
Model size2970
Hectar predicted targeting categorysignal anchor
Exons10
EggNOG OGs2EQYQ@1,2STVK@2759
Ec32 ortholog descriptionTetraspanin/Peripherin
Ec32 orthologEc-15_001390.1
Cds size2970
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1316.2564.1prot_Ecto-sp13_S_contig1316.2564.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig1316 2188..11601 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462704.3128688-CDS-Ecto-sp13_S_contig1316:2187..37481681462704.3128688-CDS-Ecto-sp13_S_contig1316:2187..3748Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1316 2188..3748 -
1681462704.3278499-CDS-Ecto-sp13_S_contig1316:4209..45531681462704.3278499-CDS-Ecto-sp13_S_contig1316:4209..4553Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1316 4210..4553 -
1681462704.339852-CDS-Ecto-sp13_S_contig1316:5491..56641681462704.339852-CDS-Ecto-sp13_S_contig1316:5491..5664Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1316 5492..5664 -
1681462704.3530262-CDS-Ecto-sp13_S_contig1316:6352..65491681462704.3530262-CDS-Ecto-sp13_S_contig1316:6352..6549Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1316 6353..6549 -
1681462704.3625805-CDS-Ecto-sp13_S_contig1316:7087..71901681462704.3625805-CDS-Ecto-sp13_S_contig1316:7087..7190Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1316 7088..7190 -
1681462704.3721752-CDS-Ecto-sp13_S_contig1316:8044..81881681462704.3721752-CDS-Ecto-sp13_S_contig1316:8044..8188Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1316 8045..8188 -
1681462704.3818648-CDS-Ecto-sp13_S_contig1316:9173..92851681462704.3818648-CDS-Ecto-sp13_S_contig1316:9173..9285Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1316 9174..9285 -
1681462704.3970478-CDS-Ecto-sp13_S_contig1316:9844..99451681462704.3970478-CDS-Ecto-sp13_S_contig1316:9844..9945Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1316 9845..9945 -
1681462704.4080532-CDS-Ecto-sp13_S_contig1316:10803..109091681462704.4080532-CDS-Ecto-sp13_S_contig1316:10803..10909Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1316 10804..10909 -
1681462704.4159808-CDS-Ecto-sp13_S_contig1316:11472..116011681462704.4159808-CDS-Ecto-sp13_S_contig1316:11472..11601Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1316 11473..11601 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig1316.2564.1

>prot_Ecto-sp13_S_contig1316.2564.1 ID=prot_Ecto-sp13_S_contig1316.2564.1|Name=mRNA_Ecto-sp13_S_contig1316.2564.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=990bp
MGKLNSFIKFVVFNANALLFLGGVGIVIVASLLLAADFIKLAQTYMHTLG
IITLMVGILVAAMSVIGCIGTNRQIERDRLWSGRRILSLYQLILVAVVVG
QGVVQMRLYSIEVSLEEAAADLPNQHGEFEGRFREGFNEAYFEQLCSASA
GGDSWVWSLVEDHCPDAISRDVCSCSDILDGSGLPGGCSTPETYSAEGCC
PDEEFCEAGKEEACPYAACRTGILEVLLSYITPARRYSTFVFVLEGMVLI
LTCLLICYNPRDSTEDILIKTGTIMRQHHKPGEGGGGEPGSQAGDLEGTP
GGAKNPAGASIHALRLDLVQPAGAARRAGAAGKRGAAGGSPGRSTPAMSP
MAVENIPTEPLSQFLTPRRGGNRITYGPDSGGGDDGETYEYQNPRKGKSA
AVGPPRAKAKTATTAAAAAVAATATAPGSSRAAQEKRQHGAGAAAIAPVP
TPVARLLPGAAPSRRHGEEKRSQERNHSYDSSSSADDEEEKKRDDHGCEG
IMADMTPVSAAAGVDSDGREFYQRLGAQTPAAQYGGGDGGGGGGIFATSR
TSPTPTGAASPLDSTRFLTETSSVRATAASRYFPHGGGGSFQVPQSPITP
AFPGSSDNGNAEKLLRLDGQTNILTSPMSADVPTSSGGGERTVVPSSSGL
SSNPRLLSQQTPVTSPRGGLPPTYQEHTDTVGNAAHSGSPAFAGHSAGGD
SPVGDPTGLAASLANALLARANAGDGASPTNISENQQQEEEAGNTGPSST
PAGVLKGLMTQTPPGGVSPARPERTRLQRQLSGSAAYPRSGSDLSPELSA
RGTPFQVADLPEEEEEETPSPLPVVEPAAKSLLQVQMSTAGEGSRMFLGQ
TPITLSNADATRLYESTVSTDTVPMTAAGATGGGAGGEERTSNTTSGRKA
STSEQQPVVEDGAPSPVVEPPDQARASPPDIPLNTKLTNGVEEPAVIAGR
TPSDGPTSDDATTPASATAAAPLPSAKPPSRFARFLAKAL
back to top

mRNA from alignment at Ecto-sp13_S_contig1316:2188..11601-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig1316.2564.1 ID=mRNA_Ecto-sp13_S_contig1316.2564.1|Name=mRNA_Ecto-sp13_S_contig1316.2564.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=9414bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1316:2188..11601- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGGGAAGCTCAACAGCTTCATCAAGTTCGTCGTCTTCAACGCGAACGC CCTCTTGTTTCTCGGGGGCGTGGGGATTGTCATCGTGGCCTCACTGCTGC TGGCAGCAGATTTTATCAAGCTTGCCCAGGTATGCGCATTAGGAAGGACC ATGTACGTTCCTGAAAGAAGCAGTGCTACAGTATGTATGCACAGGAATCC CCGTGATGAGTGAGTCCAAGCTAAGTAGTATCTACTGTACAGCAAGCACC AAGCACCGGAAGGTAGCAGGCTGGAGCAACGACGCTATTCTCGAACTGGA CGTGCTTCATGGAAGTTGTAGACTTCTGACAATGAAAGCTACAAACCACA CACAATTGTCATTGTAGAGTTCGTTCCATGGGCACATGGTCAAATCGTGT GGGAGTTTTCAGCGGACCACGGTAGGTGAATCCCACAGGTTGGTTTCCCT CGTTAGATACAGCACTCATTGCTACACTGTGATCTCAATTATGCTGGATT CTTCCCACTCTTTCGATACCCAGCTCGTCTGTGCTTTTCGAAACCTCTCC CGCGTTTTGAGGCTCTACCTGCTGTATGATGAATAACCTTCCGCCTTGTC GAAGGCTTGCATCGCTCCAGTTGACTCGTGCCGGGCTTCTGTACGTCCCG GCTAATATTCGCTCGGCTTGGTTCCGTCCCGCTCGATCGCAGACCTACAT GCACACTCTGGGGATAATCACGTTGATGGTCGGAATCTTGGTCGCGGCTA TGTCCGTCATCGGCTGCATTGGTACCAATCGACAAATAGAACGAGACCGT GAGTGCTAGCCTCTCCGTTTGATCCCAATGTTGCACGCGAGGTTGCAAGA AAACCGCTGTGATTTCCATCTTTTCGTTGACAACAAAAGATGGGTGTGGG TACAAGATCATTGGGTTCTGATGTGTGCTATATTCTCTGAATGTTGCGCA TCAGCACCCAGCCTTCATGTACCTTGCTAGATAAGCTGATGCAACACGGG TGGCCAGAGGGCAGGTTGGGCACCAATTACAACCTGGGGGGGGAGGTTGT AGGGAGGTTGCAGCCCGAAGCGTGCAAATTATCCCGCATCTTGGAAAGTG GCGTTATTGCAATCAACACGGCGGGCTGCAAGCCTGAACAAAAAATGTGT CCAAGGTCGAACTCGGCCTCCCAACCTCCCCCCCCAGGTTGTAGTTGGTG CCCAACCTGCCCTCTGGCCACCCGTGAACGAGAGGTCAGCGATGCCGCCG AGAAGTAGAAGCTCAATGCTGCACAAGCGATGTAGCACGGAAGGTGGTTT TATTCGCTCACATGTGTGTACATGACTACTCACCTTCCCTGTGGCATTGT TAATGTTGGATAATTACTTTCTCCCCATTGAAGGGGGTATTTGTGCAGAC CGATACACGTTTTTCAGAAAACCCTTAACGGCTTATTGTGTTCGGATCAC CGCCCAAAGAATAACGACAACATGATTGTTCTGGACGAATTGAGAGGCAA CAGGGGTCACACGGGGGTGAAGTTGTTGCGTCCTATGCTCTACCTCAGCA CCACAAGCATACGTTGCCCAAACATGAGCTGCACGTCACGGCCGCCCACG TAGCTCCGGACGCTTACCCCGTGTATACACCTGCCACTCCCCCCTCAAAC ATCAAGGACTTTGGAGCGGCCGGCGGATACTAAGCCTGTACCAGCTGATC CTGGTTGCCGTCGTGGTGGGACAGGGGGTAGTTCAGATGAGGCTATACAG CATCGAGGTGAATGTGACTCAAGCGAACGGTCAATGCACAGGCCCAGAGC GAGATCAGCTCGTCGATTCCTCCATGTCACCCGACGGTTGTTGTGTGCGA AACAAGACGATCGTTCCCGGACGTCGTGGTGATGCTCCATTTATCGGAAG ACGGTCATACACACCGTGACCAGCAAACAAACCCAGTGTCCACTTCGGGT ACGTAGAATGCTTTCGTTGGTGTTGCCGTCCACAAATCGAGCGTTCTTGA GTTACTTTTAGGTTGTTGAAAATTCTCGTGACAGATCCTGTACGCACTTA TGCACTCGCTAGCCCCTGCTGTGAGTCTCGACTCTTGCTGTGAGGCTCGG GTCTCTGTGTTCTTTCAGTAACACCTTTCACGGCCACGGAAAAGACCAAG ACTGTCCATTGTACGAGAGCGCCCGAACGTTTGTGGTTTTCGGTTCGGAC CAGAAAATCAACAATGCTATGTGTCGCGTGGTGAGAAAAGATCGATGGCC AGATGGCCGAGATGGTACTCAACGAATGACTGCCCAGAAATCCTCCCCTA CCCCTAATCGACATAGGTGTCTCTCGAAGAGGCGGCGGCTGATTTGCCCA ACCAGCACGGAGAGTTCGAAGGCCGTTTTCGCGAGGGATTCAACGAGGCT TACTTCGAACAGCTGTGCTCGGCCAGCGGTGCGTTCCCTTTTCACGAATC ACGATCTCGCTGCTCTATCTTGTGTAAGCACACTTCGTCATGGTGGAAAG GCCAGTCACAAGTGCTGCAAATAGCTTCTGTGTACCGCAAGAGGCGGATA GGTGGCACCCCCCTTAGACCGACGCTCGAAGGTCGATTGCGCCGCAACCA AGCGGGCGCGGAAATAGCCCGACATTTCTACGGAAAGCTCTCGACCAGAT GTCTCCCAAACCACCATTTTTGGCGTTGGCACAATCACAATCTTGGTTGT GAATCAATCCCCCTTTGAAAGTCGGCCTAGGGGGGTGCCATCTCTTCACC TCTTACGGTATACGGAAGACTCTGAAGCACCTTAATTCCTTCCGGTCCTT CCACTAGCACCGACGCGAAGTCTGCGAAAAATCTTTTCCTTTTTCATGTT GTTGATGGATCCACCAGGGTGCGAATCGCCTAGTTCCGATGTCTTGGTTA AGTTTTGACCTGTTGGGATGTGCCTGGTACGGCATCACGAATACGAGAGG AATGCAACTCGGTTAGGTCTTAGTTTTTTCCAGTACCTCTTAGGGGGTAG GTCTGCGACTGCGGGGAAGTCCTCATTTTACCGCCAGGAGCGTCCTTAAG ACATCGACTTTGTTGTCAAACCGAAGAAAAAGACGACGATAGCAACCAAA GCTCACAGACAAGCGCAAGCGAAAGCCACGCAAGATACCGTTGTATGTAA CCGCTCATCCTGTATTTGTGGTCGGCCTCGATAACCCGCCAAGACGCAGG GTTGCGCCTTCTTGCTACGGCTATCTTTCGGGCAAGTAACAATAGCTGTG ACCATGAAGAGTTATGAAGCAACATAACGACAGGAAGTTCCTTAGCTAAT ACTTGCTCGTTTGTTTGCGTTACGCCCTCACCGTGTAGTTTTAACGCCCA CTCAACGTTTCTTTGTCTGCACTTCGCATCGCTTCGACCGTGGTTTACGT CGTCGCCTGGTAGCGGGAGGAGATTCTTGGGTGTGGTCTTTGGTGGAGGA CCACTGCCCCGACGCCATCTCCAGGGACGTCTGCTCTTGCTCGGACATCC TCGATGGCAGCGGACTTCCCGGTGGTTGTTCAACCCCGGAAACGTATTCC GCAGAGGGTGAGCGTGACTGCGTGCCAATGTTGCGGGTCTGATCGCCACA AAAACAGCCGCAAGTGTCACTTTTTTGTGTTTCATATGTACGCTCGTTGT CGTTGTTGATTGCCTTTCGTGTCGTTGACATTGAATGCATAGCAGTCGTC GTAGTCGTGCTCACCGTCTCTCTCTCTGTCATCAATCTCGGTGTCCTCGC CGTGGTTGTTGCCGTTGGTCTCCTCGTGATCGTTCTTGTTGCTTTCGTCG TGATCTCACTCGGTGGCGCATGCGAAAAAAAACTGTGCTCGAATACAAAC TAGGGAATGAGGGGAGAACACCACACCGACCGGTGCATTCGAATATTTCC ACGACATGTCCCGCTGGCGGTAGTGCGCAAGGCGGCAGGTTCGCTTTTCT CAGACATAGACGCCCAAGAACGGCCAAGAGTCTCAAACATCCCACGTTCA TTCACAGCATATCCACCTCTGCATCCCATCTCTCGTCCCCGATCATCAAA CATGCTGTCAAGCCCCCAACCACCATCGATATCGCGATGAAGCAACTGGC AAGTACCTGCCCCTAAAGGGGGGAGGAGGCGCGTTGAACAGAGCGTACAA ACTTACCTCTATTGTGAGCATGTGCCGTGTAATTCGAAGCCATCAACGCA CGTATACCCTATATACGGTACCGAGCGTGGTATCGGATCATCGGTGAAAA ACGCCACATCTACCGATCGACAGCAGAAGTAGCAAAATAGCACGTAAAGT TCTCATCCGTCACCCCGACGTTAATAGAATGAGAAGGTTTCGACACATCA AACACGGCCTTGCTTGACCCCATATCTTTATCGGTGATGCGGTCGACGGA TGGGGTCTCAGGTTGCTGCCCGGACGAGGAGTTCTGCGAAGCCGGCAAGG AGGAGGCCTGTCCTTACGCCGCGTGCCGAACGGGCATATTAGAGGTTCTC CTCAGCTACATCACGTAAGACGACCAAGACGGGGGCAGGCGTCCTCGTGT TCTGCATGCCTTGCCTGTGAGACCATTGACCAGTTCGCGTCTTCGAGAGA GGTGAAGATGACCACGAGTGGGGGGGGCGACCTCATGTTCAGCCTTGGCT GTGACCACGCGTGCTCTAGAGGGGTGAAGATAACCAGTGGGGAGAGATAA AAGGGAACACCGATGTACGAATTTTGAAGGGAGTACTGAGATATAGGCGT AAGAAGGACGCCAGGACGTGAGCCTCCCTGACGCGCGAGGCTATCCTGAA GTACAGCACGAACGTCACTTGAAAAGGCGGAACCGTTAGGGCACGTAGAG GTTGTTCCCTCAATCGCATCACGTTGGAATGAAGCGGGGAAGGAGGATGC GAGGTGTTCTCGTTACCCTGAGTGGAAGCAACACGGAACATCACCAAAGC TAACAATACAGTACCGCACCACAAAACCCACTACCACCACCAATAGCAGC AGCAGCAACGGCAACAGCAACATCTAACTGCAGACCACCGCTCCGCGTGC AGGCCGGCCAGAAGGTACTCTACGTTCGTGTTTGTGCTCGAGGGCATGGT CCTCATACTCACGTGCCTCCTGATCTGCTACAACCCGAGAGACAGCACGG AGGACATCCTCATCAAGACGGGCACCATCATGCGCCAGCACCACAAACCT GGGGAAGGAGGGGGGGGAGAGCCGGGCTCGCAAGCCGGCGATCTTGAAGG TACCCTCGGGAGAATCGTGTTACTCTTGATGCCGTTGTCGCTGCCTGTGC TGCTTTGGTTGGTGCTGGTTGCTGTTGCTAGTCTCTTGATGTTGTTGTGG TTGCAGCTGTTGTTGTGGTTTGCTGCTGCTGCTGCTGTTGCTGCTCGAAG TCTCTCAGTCATGCGTTCCCGGGGGGTAATAAGTTCGTCGAAACTTTTCC AATCGTACGGTTTTCCGTTCGTGGGCGGTTGGGGAGGGGTAGAAACCCTT ACGATTTGAAAAACAGGTTGACAAGCCAAATGCGTTCGTCGTCGTCCGCA ACAACCTTGATCGAACCTAGCTCTTCGCCAGACAAATACGACGTGAAATC CCCCGTCCTGCCCGAAAAACCAAGGTGGGCAGATTCACGCACCCTATCCA CAAGGATTGCCGGCTCTCGGTACAGTTGCTTCCACTTAACAAACAACGTT GCAAAGTCGTTCTTTTAAAAAACAATTTGACCGCGGCTGCTATTAAATGG ATCAAAACACCCACTCCAAAGCTCTACCGTGACCAGAATCGCCCTGACGG GAGGATCCGCGTATGCTTCCAGCACGTGCAGTTGGCTTCCCAGATCACAC AAACACACACGCCGAAACCGCCTTGTGCGCCGGAGTCAAAGAGTCAACAA CCCCTTCTCCCCCGCGTAACCGTCGCCCCACCGAAAGGAACACCGGGGGG CGCCAAGAACCCAGCGGGCGCGTCCATCCATGCGTTAAGACTAGATCTAG TTCAGCCAGCAGGAGCGGCAAGGCGTGCGGGAGCGGCGGGAAAGCGGGGA GCTGCGGGAGGGAGCCCGGGCCGCTCGACCCCGGCGATGTCACCGATGGC CGTGGAAAACGTGAGAGATGGGGTGGGTGGGGGTGGGGGGGTGTACTCAT ATAGTCGTGCATGCCGCAGTCGTTAGACCATTGACCTCTTATCCCTACAA AGCCGGGATGGTGCACGCCGGGTTCTCACCGGACCAGGCTCTCACATCAG CAAGCGCGAAGCGGCGTGAGGTGTTCGGCGAGTCGCATGAAGGGTGCGCT GCATCCTACTAAGGGTGTTCGGCATGTTGTCTTACTTCCTTGCGTGCGGA TATCAACTGCTTATGACTTAATTTATTCTCCGGTGCTTGCGCTTCCAGAG ACAGTTACGAGCACTATGTAACTGCCTCGAGGGCGCTTGACCAATTTTAC ACAACGTGGTGCGATCATCCCCCTTGCGCGGAGTGAGGGTTATCAACCCC ACACAACATGATCTACTCGATCACCATTCATGGATGCTGCGAAGAAATAC ATAGGTAACAAGAAAAAGACGGTAACCTGTTTGCCGAATTCACGAAGCGA ATTGGCTTGTTTTATAACGTCGTCGCCGAGCGACGAAAACCCAACCCCGA TGGCGAACACCGGGGGGGGCAGCTTGTTTTACAACGTCTTTGCCAAGCGA CGAAAACCCAACCCCGACGGCAAACACCGGGGGAGAGGGGGGGGGTGTGT TTGTTGCTGGCATGGTGCCATCTTTCGTGTGGACGGATCTCGTCACCACA CGCTGGTTCAAGGCGTTCCAGCTCTATAGCTTCGAAACTCCTCGCTTGCT TATTTTTTCTTAGTCCCATTTACACCCTATCTGTGTTCATCGAGGTGCAT GTGTTCGTACTCTGAAACCGTTATTCTCACTCTTGTCATTCGTACTTTTG TTGCTTTGCCTTTCGCGGCCGCTTCAATTGCGTACAATCCCAATGACCAA ACGACGTCCCCATTTTGTCTACCCCCTCCCCCTCCTGTGTCTAAAAAGAT ACCTACTGAGCCGCTGAGCCAGTTTTTGACCCCAAGACGCGGTGGAAACA GGATAACGTACGGTCCAGACTCTGGCGGCGGCGACGATGGCGAGACGTAC GAGTACCAGAACCCCAGAAAAGGCAAGTCCGCCGCGGTGGGACCGCCGAG GGCCAAGGCGAAGACGGCCACCACCGCCGCCGCCGCCGCCGTTGCAGCAA CAGCAACTGCCCCTGGGAGTTCCCGGGCGGCGCAGGAGAAACGGCAGCAC GGAGCCGGGGCCGCGGCCATCGCCCCTGTGCCCACCCCCGTAGCCAGGCT CCTCCCGGGAGCCGCCCCGTCAAGACGCCACGGAGAAGAGAAGTGAGCAG AGGCCTGGGTGGAGGGGATGATGGTAAATCTGAGGCCTTCTGCTTGATTT TCCGTGGTGATCTACGTATGGATCTTTCGCGCGGGGTCCCATGATGACAA GGTTTCCGATAAGTGGCTTGTGTGTGCGGGCAAACACTCACCAAAGTATC GAGAGATCGTTCCAGTTATTTTTCGGAGGTGCGGCCAGCGGAAGATCAGC ATGAAGGGCGTCGGGTTTGGTGCCTGGGCGTGGATGAATCGCTTTGTGAA GTCACCGTTCCAAGTTTTTGGGCCCAACTCACTCCCAACACTTTTGGAAG CGTTTCCAACGTTTTCGATGACTTCCAATATCTTGGAAGTTCCGAATTTG GCACAAACAGCCTTACTTTTATAATGACCCTTAGCGGCTTCAGAATGTTG TTCGTTAGCCGTGAACCCTGAAACCGCCGTTGCTGCCAACGCATGGTGCG CAGGAGGAGCCAAGAACGCAACCACAGTTACGACTCCAGCAGCAGCGCCG ATGACGAAGAGGAAAAGAAGAGGGATGATCACGGGTGCGAAGGAATCATG GCAGACATGACGCCGGTGTCTGCTGCAGCAGGTGTCGACAGCGACGGCAG AGAGTTTTACCAGAGGTTGGGTGCCCAGACCCCTGCCGCACAATACGGAG GCGGCGACGGCGGCGGCGGCGGCGGTATCTTTGCAACATCGCGAACGTCA CCAACACCGACAGGTGCTGCTTCCCCCTTGGATTCCACTCGGTTTCTCAC CGAAACCTCGTCGGTACGGGCAACGGCGGCTTCGAGGTACTTTCCCCACG GTGGCGGCGGCAGCTTTCAGGTACCGCAGTCCCCGATAACGCCTGCATTT CCCGGCAGCAGCGACAACGGCAACGCCGAGAAACTTCTGCGGCTCGATGG TCAGACCAACATATTGACGTCCCCAATGTCAGCCGACGTGCCCACCTCCA GCGGCGGAGGGGAGCGAACGGTCGTTCCTTCTTCGTCCGGCTTGTCCTCC AATCCTCGCCTCTTGTCCCAGCAAACCCCTGTCACATCGCCACGTGGCGG GCTGCCACCCACGTACCAGGAACACACCGACACGGTTGGAAACGCGGCAC ACAGTGGCAGCCCGGCGTTCGCGGGGCACTCGGCGGGCGGGGACTCGCCC GTTGGCGACCCGACCGGCCTAGCGGCGTCGCTTGCCAACGCCCTCCTCGC CCGCGCCAACGCCGGGGACGGCGCGTCTCCCACCAACATCAGCGAGAACC AGCAGCAGGAAGAGGAAGCAGGGAACACCGGCCCTTCTTCTACTCCCGCC GGTGTCTTGAAAGGGTTGATGACACAGACGCCGCCGGGCGGGGTCTCTCC GGCGCGCCCTGAAAGAACAAGACTACAACGCCAGCTAAGCGGGTCTGCCG CTTATCCCCGGAGCGGGAGCGACCTGTCTCCTGAACTGTCCGCCCGCGGC ACTCCCTTCCAAGTGGCAGATTTGCCGGAGGAGGAGGAGGAGGAGACACC GTCTCCATTGCCGGTGGTTGAGCCAGCAGCGAAATCCTTGCTCCAGGTGC AGATGAGCACGGCCGGAGAGGGGTCGCGCATGTTTCTAGGCCAGACGCCG ATCACGTTATCGAACGCAGACGCGACGCGGCTGTACGAGTCCACTGTTTC CACTGACACTGTGCCGATGACTGCAGCAGGAGCTACAGGTGGGGGAGCCG GGGGCGAAGAGAGAACGTCTAACACTACGTCCGGGCGGAAGGCTAGTACC TCGGAGCAGCAGCCGGTTGTCGAGGACGGAGCGCCCTCACCCGTTGTGGA ACCTCCCGACCAAGCACGCGCATCGCCTCCGGACATCCCACTCAACACGA AACTGACCAACGGGGTGGAGGAACCGGCGGTGATTGCGGGGCGTACCCCC TCCGATGGCCCCACCAGCGACGACGCTACCACTCCCGCAAGCGCCACAGC AGCAGCCCCGCTTCCCAGCGCCAAACCGCCGAGCAGGTTCGCGCGCTTCC TTGCGAAGGCGTTG
back to top

Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1316:2188..11601-

>mRNA_Ecto-sp13_S_contig1316.2564.1 ID=mRNA_Ecto-sp13_S_contig1316.2564.1|Name=mRNA_Ecto-sp13_S_contig1316.2564.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=2970bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1316:2188..11601- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGGGAAGCTCAACAGCTTCATCAAGTTCGTCGTCTTCAACGCGAACGC
CCTCTTGTTTCTCGGGGGCGTGGGGATTGTCATCGTGGCCTCACTGCTGC
TGGCAGCAGATTTTATCAAGCTTGCCCAGACCTACATGCACACTCTGGGG
ATAATCACGTTGATGGTCGGAATCTTGGTCGCGGCTATGTCCGTCATCGG
CTGCATTGGTACCAATCGACAAATAGAACGAGACCGACTTTGGAGCGGCC
GGCGGATACTAAGCCTGTACCAGCTGATCCTGGTTGCCGTCGTGGTGGGA
CAGGGGGTAGTTCAGATGAGGCTATACAGCATCGAGGTGTCTCTCGAAGA
GGCGGCGGCTGATTTGCCCAACCAGCACGGAGAGTTCGAAGGCCGTTTTC
GCGAGGGATTCAACGAGGCTTACTTCGAACAGCTGTGCTCGGCCAGCGCG
GGAGGAGATTCTTGGGTGTGGTCTTTGGTGGAGGACCACTGCCCCGACGC
CATCTCCAGGGACGTCTGCTCTTGCTCGGACATCCTCGATGGCAGCGGAC
TTCCCGGTGGTTGTTCAACCCCGGAAACGTATTCCGCAGAGGGTTGCTGC
CCGGACGAGGAGTTCTGCGAAGCCGGCAAGGAGGAGGCCTGTCCTTACGC
CGCGTGCCGAACGGGCATATTAGAGGTTCTCCTCAGCTACATCACGCCGG
CCAGAAGGTACTCTACGTTCGTGTTTGTGCTCGAGGGCATGGTCCTCATA
CTCACGTGCCTCCTGATCTGCTACAACCCGAGAGACAGCACGGAGGACAT
CCTCATCAAGACGGGCACCATCATGCGCCAGCACCACAAACCTGGGGAAG
GAGGGGGGGGAGAGCCGGGCTCGCAAGCCGGCGATCTTGAAGGAACACCG
GGGGGCGCCAAGAACCCAGCGGGCGCGTCCATCCATGCGTTAAGACTAGA
TCTAGTTCAGCCAGCAGGAGCGGCAAGGCGTGCGGGAGCGGCGGGAAAGC
GGGGAGCTGCGGGAGGGAGCCCGGGCCGCTCGACCCCGGCGATGTCACCG
ATGGCCGTGGAAAACATACCTACTGAGCCGCTGAGCCAGTTTTTGACCCC
AAGACGCGGTGGAAACAGGATAACGTACGGTCCAGACTCTGGCGGCGGCG
ACGATGGCGAGACGTACGAGTACCAGAACCCCAGAAAAGGCAAGTCCGCC
GCGGTGGGACCGCCGAGGGCCAAGGCGAAGACGGCCACCACCGCCGCCGC
CGCCGCCGTTGCAGCAACAGCAACTGCCCCTGGGAGTTCCCGGGCGGCGC
AGGAGAAACGGCAGCACGGAGCCGGGGCCGCGGCCATCGCCCCTGTGCCC
ACCCCCGTAGCCAGGCTCCTCCCGGGAGCCGCCCCGTCAAGACGCCACGG
AGAAGAGAAGAGGAGCCAAGAACGCAACCACAGTTACGACTCCAGCAGCA
GCGCCGATGACGAAGAGGAAAAGAAGAGGGATGATCACGGGTGCGAAGGA
ATCATGGCAGACATGACGCCGGTGTCTGCTGCAGCAGGTGTCGACAGCGA
CGGCAGAGAGTTTTACCAGAGGTTGGGTGCCCAGACCCCTGCCGCACAAT
ACGGAGGCGGCGACGGCGGCGGCGGCGGCGGTATCTTTGCAACATCGCGA
ACGTCACCAACACCGACAGGTGCTGCTTCCCCCTTGGATTCCACTCGGTT
TCTCACCGAAACCTCGTCGGTACGGGCAACGGCGGCTTCGAGGTACTTTC
CCCACGGTGGCGGCGGCAGCTTTCAGGTACCGCAGTCCCCGATAACGCCT
GCATTTCCCGGCAGCAGCGACAACGGCAACGCCGAGAAACTTCTGCGGCT
CGATGGTCAGACCAACATATTGACGTCCCCAATGTCAGCCGACGTGCCCA
CCTCCAGCGGCGGAGGGGAGCGAACGGTCGTTCCTTCTTCGTCCGGCTTG
TCCTCCAATCCTCGCCTCTTGTCCCAGCAAACCCCTGTCACATCGCCACG
TGGCGGGCTGCCACCCACGTACCAGGAACACACCGACACGGTTGGAAACG
CGGCACACAGTGGCAGCCCGGCGTTCGCGGGGCACTCGGCGGGCGGGGAC
TCGCCCGTTGGCGACCCGACCGGCCTAGCGGCGTCGCTTGCCAACGCCCT
CCTCGCCCGCGCCAACGCCGGGGACGGCGCGTCTCCCACCAACATCAGCG
AGAACCAGCAGCAGGAAGAGGAAGCAGGGAACACCGGCCCTTCTTCTACT
CCCGCCGGTGTCTTGAAAGGGTTGATGACACAGACGCCGCCGGGCGGGGT
CTCTCCGGCGCGCCCTGAAAGAACAAGACTACAACGCCAGCTAAGCGGGT
CTGCCGCTTATCCCCGGAGCGGGAGCGACCTGTCTCCTGAACTGTCCGCC
CGCGGCACTCCCTTCCAAGTGGCAGATTTGCCGGAGGAGGAGGAGGAGGA
GACACCGTCTCCATTGCCGGTGGTTGAGCCAGCAGCGAAATCCTTGCTCC
AGGTGCAGATGAGCACGGCCGGAGAGGGGTCGCGCATGTTTCTAGGCCAG
ACGCCGATCACGTTATCGAACGCAGACGCGACGCGGCTGTACGAGTCCAC
TGTTTCCACTGACACTGTGCCGATGACTGCAGCAGGAGCTACAGGTGGGG
GAGCCGGGGGCGAAGAGAGAACGTCTAACACTACGTCCGGGCGGAAGGCT
AGTACCTCGGAGCAGCAGCCGGTTGTCGAGGACGGAGCGCCCTCACCCGT
TGTGGAACCTCCCGACCAAGCACGCGCATCGCCTCCGGACATCCCACTCA
ACACGAAACTGACCAACGGGGTGGAGGAACCGGCGGTGATTGCGGGGCGT
ACCCCCTCCGATGGCCCCACCAGCGACGACGCTACCACTCCCGCAAGCGC
CACAGCAGCAGCCCCGCTTCCCAGCGCCAAACCGCCGAGCAGGTTCGCGC
GCTTCCTTGCGAAGGCGTTG
back to top