mRNA_Ecto-sp13_S_contig13080.2520.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig13080.2520.1 vs. uniprot
Match: D8LT26_ECTSI (Methylenetetrahydrofolate reductase (NAD(P)H) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT26_ECTSI) HSP 1 Score: 231 bits (590), Expect = 2.760e-74 Identity = 116/117 (99.15%), Postives = 117/117 (100.00%), Query Frame = 2
Query: 23 MKIIDKIQQAMEAKEPFYSFEFFPPKTSAGVENLSARMERMATLEPLFVDVTWGAGGSTSDLTLAISANAQKYLGVEVLMHLTCTNLKMEEIKGALNKAREAGIQNILALRGDPAKG 373
MKIIDKIQQAMEAKEPFYSFEFFPPKTSAGVENLSARMERMATLEPLFVDVTWGAGGSTSDLTLAISANAQKYLGVEVLMHLTCTNLK+EEIKGALNKAREAGIQNILALRGDPAKG
Sbjct: 1 MKIIDKIQQAMEAKEPFYSFEFFPPKTSAGVENLSARMERMATLEPLFVDVTWGAGGSTSDLTLAISANAQKYLGVEVLMHLTCTNLKVEEIKGALNKAREAGIQNILALRGDPAKG 117
BLAST of mRNA_Ecto-sp13_S_contig13080.2520.1 vs. uniprot
Match: A0A6H5KKX8_9PHAE (Methylenetetrahydrofolate reductase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKX8_9PHAE) HSP 1 Score: 231 bits (590), Expect = 6.570e-71 Identity = 116/117 (99.15%), Postives = 117/117 (100.00%), Query Frame = 2
Query: 23 MKIIDKIQQAMEAKEPFYSFEFFPPKTSAGVENLSARMERMATLEPLFVDVTWGAGGSTSDLTLAISANAQKYLGVEVLMHLTCTNLKMEEIKGALNKAREAGIQNILALRGDPAKG 373
MKIIDKIQQAMEAKEPFYSFEFFPPKTSAGVENLSARMERMATLEPLFVDVTWGAGGSTSDLTLAISANAQKYLGVEVLMHLTCTNLK+EEIKGALNKAREAGIQNILALRGDPAKG
Sbjct: 1 MKIIDKIQQAMEAKEPFYSFEFFPPKTSAGVENLSARMERMATLEPLFVDVTWGAGGSTSDLTLAISANAQKYLGVEVLMHLTCTNLKVEEIKGALNKAREAGIQNILALRGDPAKG 117
BLAST of mRNA_Ecto-sp13_S_contig13080.2520.1 vs. uniprot
Match: A0A835YII2_9STRA (Methylenetetrahydrofolate reductase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YII2_9STRA) HSP 1 Score: 187 bits (475), Expect = 4.650e-54 Identity = 92/117 (78.63%), Postives = 104/117 (88.89%), Query Frame = 2
Query: 23 MKIIDKIQQAMEAKEPFYSFEFFPPKTSAGVENLSARMERMATLEPLFVDVTWGAGGSTSDLTLAISANAQKYLGVEVLMHLTCTNLKMEEIKGALNKAREAGIQNILALRGDPAKG 373
MKII+KI+ A K+ FYSFEFFPPKT+AGVENL RMERMA LEPLF+DVTWGAGGSTS+LTLAISA AQKYLGV+VLMHLTCT + +E++K AL KAREAGIQNILALRGDP+KG
Sbjct: 1 MKIIEKIKHAEAQKQVFYSFEFFPPKTAAGVENLHLRMERMAALEPLFIDVTWGAGGSTSELTLAISAAAQKYLGVQVLMHLTCTGMTVEQVKEALIKAREAGIQNILALRGDPSKG 117
BLAST of mRNA_Ecto-sp13_S_contig13080.2520.1 vs. uniprot
Match: A0A2E8I2E2_9PROT (Methylenetetrahydrofolate reductase (Fragment) n=1 Tax=Bdellovibrionaceae bacterium TaxID=2026715 RepID=A0A2E8I2E2_9PROT) HSP 1 Score: 164 bits (416), Expect = 1.190e-49 Identity = 78/117 (66.67%), Postives = 93/117 (79.49%), Query Frame = 2
Query: 23 MKIIDKIQQAMEAKEPFYSFEFFPPKTSAGVENLSARMERMATLEPLFVDVTWGAGGSTSDLTLAISANAQKYLGVEVLMHLTCTNLKMEEIKGALNKAREAGIQNILALRGDPAKG 373
MKIIDKI Q++ +PF+S EFFPPKT AG++NL R+ERMA LEP FVD TWGAGGSTS LTL + +AQKY +EV+MHLTCTN+ EI+ ALN AR+AGI+NILALRGDP G
Sbjct: 1 MKIIDKINQSIVENKPFFSLEFFPPKTKAGIQNLYDRLERMARLEPAFVDFTWGAGGSTSQLTLELCQSAQKYFALEVMMHLTCTNISEAEIRSALNSARDAGIKNILALRGDPPVG 117
BLAST of mRNA_Ecto-sp13_S_contig13080.2520.1 vs. uniprot
Match: K3WKM9_GLOUD (Methylenetetrahydrofolate reductase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WKM9_GLOUD) HSP 1 Score: 172 bits (436), Expect = 1.980e-48 Identity = 81/117 (69.23%), Postives = 98/117 (83.76%), Query Frame = 2
Query: 23 MKIIDKIQQAMEAKEPFYSFEFFPPKTSAGVENLSARMERMATLEPLFVDVTWGAGGSTSDLTLAISANAQKYLGVEVLMHLTCTNLKMEEIKGALNKAREAGIQNILALRGDPAKG 373
MKIIDKI Q +E E FYSFEFFPPKT AGV+NL RM+RMA+LEPLF D+TWGAGGS++ LT+ ISANAQK G+E+LMH+TCTN+ E++K AL KA++AGI NILALRGDP +G
Sbjct: 1 MKIIDKINQCIEKNEVFYSFEFFPPKTPAGVDNLYTRMDRMASLEPLFCDMTWGAGGSSAQLTIDISANAQKLSGLEMLMHMTCTNMAEEDVKNALEKAKDAGITNILALRGDPVRG 117
BLAST of mRNA_Ecto-sp13_S_contig13080.2520.1 vs. uniprot
Match: A0A0P1AW23_PLAHL (Methylenetetrahydrofolate reductase n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AW23_PLAHL) HSP 1 Score: 172 bits (436), Expect = 2.010e-48 Identity = 81/117 (69.23%), Postives = 101/117 (86.32%), Query Frame = 2
Query: 23 MKIIDKIQQAMEAKEPFYSFEFFPPKTSAGVENLSARMERMATLEPLFVDVTWGAGGSTSDLTLAISANAQKYLGVEVLMHLTCTNLKMEEIKGALNKAREAGIQNILALRGDPAKG 373
MK+IDKI +++E +E FYSFEFFPPKT AGV+NL ARM+RMA LEPLF D+TWGAGGS++ LTL +SANAQK G+E+LMH+TCTN+ +IK ALN+A++AGIQNILALRGDP +G
Sbjct: 1 MKVIDKINESIERQEVFYSFEFFPPKTLAGVDNLYARMDRMAALEPLFCDMTWGAGGSSARLTLELSANAQKLSGLEMLMHMTCTNMTEADIKKALNQAKDAGIQNILALRGDPVRG 117
BLAST of mRNA_Ecto-sp13_S_contig13080.2520.1 vs. uniprot
Match: A0A485LAE6_9STRA (Methylenetetrahydrofolate reductase n=3 Tax=Aphanomyces TaxID=100860 RepID=A0A485LAE6_9STRA) HSP 1 Score: 171 bits (433), Expect = 5.300e-48 Identity = 79/118 (66.95%), Postives = 100/118 (84.75%), Query Frame = 2
Query: 23 MKIIDKIQQAMEAKEPFYSFEFFPPKTSAGVENLSARMERMATLEPLFVDVTWGAGGSTSDLTLAISANAQKYLGVEVLMHLTCTNLKMEEIKGALNKAREAGIQNILALRGDPAKGK 376
MKIIDKI + +E KE FYSFE+FPPKT+AGV NL +RM+RMA +EPLF D+TWGAGGST+ +T+ IS+NAQK+ G+E+LMHLTCTN+ IK AL+ A++AGIQNILALRGDP +G+
Sbjct: 1 MKIIDKINEKIEKKEAFYSFEYFPPKTAAGVTNLYSRMDRMAAMEPLFCDMTWGAGGSTASMTIEISSNAQKFSGLEMLMHLTCTNMPKGSIKNALDSAKDAGIQNILALRGDPPRGQ 118
BLAST of mRNA_Ecto-sp13_S_contig13080.2520.1 vs. uniprot
Match: A0A381PH35_9ZZZZ (Methylenetetrahydrofolate reductase (NAD(P)H) (Fragment) n=1 Tax=marine metagenome TaxID=408172 RepID=A0A381PH35_9ZZZZ) HSP 1 Score: 161 bits (407), Expect = 7.600e-48 Identity = 73/116 (62.93%), Postives = 94/116 (81.03%), Query Frame = 2
Query: 23 MKIIDKIQQAMEAKEPFYSFEFFPPKTSAGVENLSARMERMATLEPLFVDVTWGAGGSTSDLTLAISANAQKYLGVEVLMHLTCTNLKMEEIKGALNKAREAGIQNILALRGDPAK 370
M IIDKI Q + K+PFYSFE+FPP T AG+ NL AR+E+M LEP+FVD+TWGAGGST++ TL I+ N QK+ G++V+MHLTCTN+ +E++ L KAR AGI+NILALRGDPA+
Sbjct: 1 MHIIDKINQRIREKKPFYSFEYFPPATEAGLHNLYARIEQMVALEPIFVDITWGAGGSTNEKTLGIAENLQKFFGLDVMMHLTCTNMPIEQLDEVLEKARAAGIRNILALRGDPAR 116
BLAST of mRNA_Ecto-sp13_S_contig13080.2520.1 vs. uniprot
Match: A0A421G1F7_9STRA (Methylenetetrahydrofolate reductase n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421G1F7_9STRA) HSP 1 Score: 171 bits (432), Expect = 9.120e-48 Identity = 81/117 (69.23%), Postives = 99/117 (84.62%), Query Frame = 2
Query: 23 MKIIDKIQQAMEAKEPFYSFEFFPPKTSAGVENLSARMERMATLEPLFVDVTWGAGGSTSDLTLAISANAQKYLGVEVLMHLTCTNLKMEEIKGALNKAREAGIQNILALRGDPAKG 373
MK+IDKI ++E +E FYSFEFFPPKT AGVENL ARM+RMA LEPLF D+TWGAGGS++ LT +SANAQK G+E+LMH+TCTN+ +IK AL++A+EAGIQNILALRGDP +G
Sbjct: 15 MKVIDKINASIERQEVFYSFEFFPPKTPAGVENLYARMDRMAALEPLFCDMTWGAGGSSAQLTTELSANAQKLSGLEMLMHMTCTNMAAGDIKKALDQAKEAGIQNILALRGDPVRG 131
BLAST of mRNA_Ecto-sp13_S_contig13080.2520.1 vs. uniprot
Match: H3GAC2_PHYRM (Methylenetetrahydrofolate reductase n=22 Tax=Peronosporaceae TaxID=4777 RepID=H3GAC2_PHYRM) HSP 1 Score: 170 bits (430), Expect = 1.480e-47 Identity = 80/117 (68.38%), Postives = 100/117 (85.47%), Query Frame = 2
Query: 23 MKIIDKIQQAMEAKEPFYSFEFFPPKTSAGVENLSARMERMATLEPLFVDVTWGAGGSTSDLTLAISANAQKYLGVEVLMHLTCTNLKMEEIKGALNKAREAGIQNILALRGDPAKG 373
MKIIDKI ++E +E FYSFEFFPPKT AGV+NL ARM+RMA LEPLF D+TWGAGGS++ LTL +SANAQK G+E+LMH+TCTN+ +IK AL++A++AGIQN+LALRGDP +G
Sbjct: 1 MKIIDKINASVERQECFYSFEFFPPKTPAGVDNLYARMDRMAALEPLFCDMTWGAGGSSAQLTLELSANAQKLSGLEMLMHMTCTNMAEADIKKALDQAKDAGIQNVLALRGDPVRG 117 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13080.2520.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig13080.2520.1 >prot_Ecto-sp13_S_contig13080.2520.1 ID=prot_Ecto-sp13_S_contig13080.2520.1|Name=mRNA_Ecto-sp13_S_contig13080.2520.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=119bp MKIIDKIQQAMEAKEPFYSFEFFPPKTSAGVENLSARMERMATLEPLFVDback to top mRNA from alignment at Ecto-sp13_S_contig13080:740..3436- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig13080.2520.1 ID=mRNA_Ecto-sp13_S_contig13080.2520.1|Name=mRNA_Ecto-sp13_S_contig13080.2520.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2697bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13080:740..3436- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig13080:740..3436- >mRNA_Ecto-sp13_S_contig13080.2520.1 ID=mRNA_Ecto-sp13_S_contig13080.2520.1|Name=mRNA_Ecto-sp13_S_contig13080.2520.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=357bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13080:740..3436- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |