mRNA_Ecto-sp13_S_contig13003.2470.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig13003.2470.1 vs. uniprot
Match: D7FUY6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUY6_ECTSI) HSP 1 Score: 331 bits (848), Expect = 1.070e-111 Identity = 181/226 (80.09%), Postives = 187/226 (82.74%), Query Frame = 1
Query: 1 IFTRE--RKTWQPRLLGSLLTAMVEFSKVAAGMQVAYVELTGVGVTLVGNEASNTFCALFHDREDGATFGRLIASEILNAFLEAHAKDIKEASSLNLKDFMAFKYRIPGIEITGHRGEGEXXXXXXXXXXXRETREEDETHMIPPFVHVKGILRCVLVTETSETFQTAEIDQLGLLANLQALVGISTDIMAQAGNGCVSMSLESSSNSRILIWRIDAWTLVIAVHK 672
+F+RE QPRLLGSLLTAMVEFSKVAAGMQVAYVELTGVGVTLVGNEA+NTFCALFHDREDGATFGRLIASEILNAFLEAHAKDIKEASSLNLKDFMAFKYRIPGI + ++ VHVKGILRCVLVTETSETFQTAEIDQLGLLANLQALVGISTDIMAQAGNGCVSMSLESSSNSRILIWRIDAWTLVIAVHK
Sbjct: 101 LFSREFANTVQQPRLLGSLLTAMVEFSKVAAGMQVAYVELTGVGVTLVGNEATNTFCALFHDREDGATFGRLIASEILNAFLEAHAKDIKEASSLNLKDFMAFKYRIPGIV------------------------RKSVQPVLGKLVHVKGILRCVLVTETSETFQTAEIDQLGLLANLQALVGISTDIMAQAGNGCVSMSLESSSNSRILIWRIDAWTLVIAVHK 302
BLAST of mRNA_Ecto-sp13_S_contig13003.2470.1 vs. uniprot
Match: A0A6H5JVE3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVE3_9PHAE) HSP 1 Score: 325 bits (832), Expect = 1.520e-109 Identity = 178/226 (78.76%), Postives = 185/226 (81.86%), Query Frame = 1
Query: 1 IFTRE--RKTWQPRLLGSLLTAMVEFSKVAAGMQVAYVELTGVGVTLVGNEASNTFCALFHDREDGATFGRLIASEILNAFLEAHAKDIKEASSLNLKDFMAFKYRIPGIEITGHRGEGEXXXXXXXXXXXRETREEDETHMIPPFVHVKGILRCVLVTETSETFQTAEIDQLGLLANLQALVGISTDIMAQAGNGCVSMSLESSSNSRILIWRIDAWTLVIAVHK 672
+F+RE QPRLLGSLLTAMVEFSKVAAGMQVAYVELT VGVTLVGNEA+NTFCALFHDR DGATFGRLIASEILNAFLEAHAKDIKEASSLNLKDFMAFKYRIPGI + ++ VHVKGILRCVLVTETSETFQTAEIDQLGLLANLQALVGISTDIMAQAGNGCVSMSLESSSNSRILIWRIDAWTLV+AVHK
Sbjct: 14 LFSREFANTVQQPRLLGSLLTAMVEFSKVAAGMQVAYVELTSVGVTLVGNEATNTFCALFHDRGDGATFGRLIASEILNAFLEAHAKDIKEASSLNLKDFMAFKYRIPGIV------------------------RKSVQPVLGKLVHVKGILRCVLVTETSETFQTAEIDQLGLLANLQALVGISTDIMAQAGNGCVSMSLESSSNSRILIWRIDAWTLVMAVHK 215
BLAST of mRNA_Ecto-sp13_S_contig13003.2470.1 vs. uniprot
Match: A0A835YZ72_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZ72_9STRA) HSP 1 Score: 184 bits (467), Expect = 9.910e-55 Identity = 102/217 (47.00%), Postives = 141/217 (64.98%), Query Frame = 1
Query: 28 QPRLLGSLLTAMVEFSKVAAGMQVAYVELTGVGVTLVGNEASNTFCALFHDREDGATFGRLIASEILNAFLEAHAKDIKEASSLNLKDFMAFKYRIPGIEITGHRGEGEXXXXXXXXXXXRETREEDETHMIPPFVHVKGILRCVLVTETSETFQTAEIDQLGLLANLQALVGISTDIMAQAGNGCVSMSLESSS--NSRILIWRIDAWTLVIAVHK 672
QPR++GSLL AM+EFS V AGM V+Y+ELTG+GVT+V NEA+ FCALF DREDGA FGRL+A+EIL F + +A ++ A+ LNL DF F ++ + + ++ V G+L+ VL+TE+S+TFQTA+IDQLGLLANL AL G+STDIMA G+ +++LE + NSR+L+WR++ TLV+A +
Sbjct: 26 QPRMVGSLLIAMLEFSMVTAGMPVSYIELTGLGVTVVWNEAAKVFCALFLDREDGADFGRLLATEILAGFQDEYANELGSAA-LNLVDFSGFHSKL------------------------LDAIQRTAQPVLGRLVQAHGVLKAVLITESSQTFQTADIDQLGLLANLGALAGLSTDIMAHCGDSVRTLTLEGDARGNSRVLVWRVEQSTLVVAASR 217
BLAST of mRNA_Ecto-sp13_S_contig13003.2470.1 vs. uniprot
Match: A0A7R9UFX6_9STRA (Hypothetical protein n=2 Tax=Pinguiochrysidaceae TaxID=1004268 RepID=A0A7R9UFX6_9STRA) HSP 1 Score: 163 bits (412), Expect = 2.010e-46 Identity = 92/218 (42.20%), Postives = 131/218 (60.09%), Query Frame = 1
Query: 28 QPRLLGSLLTAMVEFSKVAAGMQVAYVELTGVGVTLVGNEASNTFCALFHDREDGATFGRLIASEILNAFLEAHAKDIKEASSLNLKDFMAFKYRIPGIEITGHRGEGEXXXXXXXXXXXRETREEDETHMIPPFVHV---KGILRCVLVTETSETFQTAEIDQLGLLANLQALVGISTDIMAQAGNGCVSMSLESSSNSRILIWRIDAWTLVIAVHK 672
QPRL+GSLLT MVEFS +AAGM ++Y+EL GV VT+V +EA+ FCALFHDREDG TFGRLI +E+L F++ + +I NLKDF + RE + + P V +G++ +L+TE +E ++D++G+LANLQ L+ +TDI+A + C+ ++LE SS+SRIL+WRID LV++V K
Sbjct: 26 QPRLMGSLLTTMVEFSAMAAGMPISYIELGGVSVTIVLHEAAKVFCALFHDREDGPTFGRLICTEMLYRFIDRFSSEIGSPGH-NLKDFHDYH---------------------------REIADAIRNAVNPVLAKVQAQRGVILALLITEDAEVHPQTDVDKIGVLANLQPLLSSATDILAHHDDSCLHLALEGSSHSRILLWRIDRAVLVVSVSK 215
BLAST of mRNA_Ecto-sp13_S_contig13003.2470.1 vs. uniprot
Match: A0A0P1A6Z4_PLAHL (Uncharacterized protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1A6Z4_PLAHL) HSP 1 Score: 137 bits (344), Expect = 3.160e-36 Identity = 75/215 (34.88%), Postives = 121/215 (56.28%), Query Frame = 1
Query: 28 QPRLLGSLLTAMVEFSKVAAGMQVAYVELTGVGVTLVGNEASNTFCALFHDREDGATFGRLIASEILNAFLEAHAKDIKEASSLNLKDFMAFKYRIPGIEITGHRGEGEXXXXXXXXXXXRETREEDETHMIPPFVHVKGILRCVLVTETSETFQTAEIDQLGLLANLQALVGISTDIMAQAGNGCVSMSLESSSNSRILIWRIDAWTLVIAVHK 672
QPRL+GSL+TAM+EFS A+G V+Y++++ V VT++ N+ FCA+FHD DGA++ +A E+L AF+ H ++ NL+DF F+YRI + + ++ +GIL+ +LV + + T T ++D +G+LANLQALV S D+M+ +G+ SM+++S NS I + ++ +I VHK
Sbjct: 26 QPRLVGSLITAMLEFSNKASGAPVSYIQMSSVAVTMITNDKHKVFCAMFHDTTDGASYSAFVAQELLTAFIAQHGDELGNMGH-NLRDFHRFQYRILSVI------------------------RDSVKPVVRKLQKQRGILKAMLVVDGAVTCATGDVDPIGVLANLQALVNSSIDMMSFSGDDVSSMTIQSGRNSCIQVSVVEGTDALIVVHK 215
BLAST of mRNA_Ecto-sp13_S_contig13003.2470.1 vs. uniprot
Match: A0A485KWW7_9STRA (Aste57867_12638 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KWW7_9STRA) HSP 1 Score: 135 bits (339), Expect = 1.510e-35 Identity = 79/215 (36.74%), Postives = 121/215 (56.28%), Query Frame = 1
Query: 28 QPRLLGSLLTAMVEFSKVAAGMQVAYVELTGVGVTLVGNEASNTFCALFHDREDGATFGRLIASEILNAFLEAHAKDIKEASSLNLKDFMAFKYRIPGIEITGHRGEGEXXXXXXXXXXXRETREEDETHMIPPFVHVKGILRCVLVTETSETFQTAEIDQLGLLANLQALVGISTDIMAQAGNGCVSMSLESSSNSRILIWRIDAWTLVIAVHK 672
QPRL+GSLLTA++EFS G+ V+Y+E + V VT+V NE + FCA+F+D DG FG IA EIL AF++ +A D+ NL+DF F Y+I E E ++ +GI + +LVT+ + T+ T ++DQLG+L NLQ+L ++ D+MA G+ S++++ + N I + I+ TLV+ V+K
Sbjct: 17 QPRLIGSLLTAILEFSTKTTGVPVSYMEFSNVAVTIVMNETAKVFCAIFYDLADGPKFGAFIAKEILTAFVDEYAADLGNVGH-NLRDFHGFHYKIS------------------------EVIRESVKPILATLQQQRGIQKAILVTDDTVTYATVDVDQLGVLVNLQSLRTLAGDMMAFVGDNAHSVTMQGARNCNIQVSTIENATLVV-VYK 205
BLAST of mRNA_Ecto-sp13_S_contig13003.2470.1 vs. uniprot
Match: A0A7S2B5T7_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B5T7_9STRA) HSP 1 Score: 134 bits (337), Expect = 3.770e-35 Identity = 81/215 (37.67%), Postives = 118/215 (54.88%), Query Frame = 1
Query: 28 QPRLLGSLLTAMVEFSKVAAGMQVAYVELTGVGVTLVGNEASNTFCALFHDREDGATFGRLIASEILNAFLEAHAKDIKEASSLNLKDFMAFKYRIPGIEITGHRGEGEXXXXXXXXXXXRETREEDETHMIPPFVHVKGILRCVLVTETSETFQTAEIDQLGLLANLQALVGISTDIMAQAGNGCVSMSLESSSNSRILIWRIDAWTLVIAVHK 672
QPR++G LLTAM+E S G+ V Y+EL+ V VT++ +E CALFHDR DG FG+LIAS+IL AFLE ++ ++ NLKDF F +I G R H H + I + +LVTE + + +D+L LLANLQAL+ +S++++AQ + C + LE S + R L+WRI+ ++ V+K
Sbjct: 27 QPRMIGGLLTAMMESSVRTTGLPVTYIELSNVAVTIMKDEVVKVCCALFHDRSDGPAFGKLIASQILCAFLEEYSGNLTSPGR-NLKDFHGFHLKIAGA----------------VRNSIRPVLNRLHGH------HSRAIQKAMLVTEDAIVQTGSAVDELALLANLQALLYLSSELLAQRDDLCSQIVLEGSGDVRTLLWRIEHAVFIVVVNK 218
BLAST of mRNA_Ecto-sp13_S_contig13003.2470.1 vs. uniprot
Match: A0A6G0WTP7_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WTP7_9STRA) HSP 1 Score: 132 bits (333), Expect = 1.410e-34 Identity = 78/215 (36.28%), Postives = 118/215 (54.88%), Query Frame = 1
Query: 28 QPRLLGSLLTAMVEFSKVAAGMQVAYVELTGVGVTLVGNEASNTFCALFHDREDGATFGRLIASEILNAFLEAHAKDIKEASSLNLKDFMAFKYRIPGIEITGHRGEGEXXXXXXXXXXXRETREEDETHMIPPFVHVKGILRCVLVTETSETFQTAEIDQLGLLANLQALVGISTDIMAQAGNGCVSMSLESSSNSRILIWRIDAWTLVIAVHK 672
QPRL+GSLLTA++EFS G V+Y+E T V VT+V NE++ FCA+F D DG FG +A EIL AF++ +A D+ NL+DF F Y+I E E ++ +GI + +LVT+ + T+ T E+DQLG+L N+Q+L ++ D MA G+ S+++ + NS I + I+ TLV++ +
Sbjct: 26 QPRLIGSLLTAILEFSAKTTGAPVSYMEFTNVAVTIVVNESAKVFCAIFFDVADGPKFGAFLAKEILAAFVDEYAGDLGNIGH-NLRDFHGFHYKIS------------------------EVIRESVKPILSTLQQQRGIQKAILVTDDAVTYATVEVDQLGVLVNMQSLRTLAADTMAFVGDNAHSITILGARNSSIQVRAIENATLVVSFKQ 215
BLAST of mRNA_Ecto-sp13_S_contig13003.2470.1 vs. uniprot
Match: A0A3F2RMN3_9STRA (Uncharacterized protein n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RMN3_9STRA) HSP 1 Score: 139 bits (350), Expect = 2.190e-34 Identity = 78/215 (36.28%), Postives = 123/215 (57.21%), Query Frame = 1
Query: 28 QPRLLGSLLTAMVEFSKVAAGMQVAYVELTGVGVTLVGNEASNTFCALFHDREDGATFGRLIASEILNAFLEAHAKDIKEASSLNLKDFMAFKYRIPGIEITGHRGEGEXXXXXXXXXXXRETREEDETHMIPPFVHVKGILRCVLVTETSETFQTAEIDQLGLLANLQALVGISTDIMAQAGNGCVSMSLESSSNSRILIWRIDAWTLVIAVHK 672
QPRL+GSLLTAM+EFS A+G V+Y++++ V VT+V N+ FCA+FHD DGA+F +A E+L AF+ H +++ NL+DF F+YRI + E ++ +GIL+ +LV + + T T ++D +G+LANLQALV S D+M+ +G+G SM+++S NS I + ++ ++ V+K
Sbjct: 26 QPRLVGSLLTAMLEFSTKASGSPVSYIQMSSVAVTVVTNDKHKVFCAMFHDTTDGASFSAFVAQELLAAFIAQHGEELGNMGH-NLRDFHRFQYRILSVI------------------------RESVNPIVRKLQKQRGILKAMLVVDGAVTCATGDVDPIGVLANLQALVNSSIDMMSFSGDGVNSMTIQSGRNSCIQVSVVEGSDALVVVYK 215
BLAST of mRNA_Ecto-sp13_S_contig13003.2470.1 vs. uniprot
Match: F0WRA1_9STRA (Uncharacterized protein AlNc14C210G8908 n=2 Tax=Albugo TaxID=65356 RepID=F0WRA1_9STRA) HSP 1 Score: 130 bits (326), Expect = 1.520e-33 Identity = 82/216 (37.96%), Postives = 120/216 (55.56%), Query Frame = 1
Query: 28 QPRLLGSLLTAMVEFSKVAAGMQVAYVELTGVGVTLVGNEASNTFCALFHDREDGATFGRLIASEILNAFLEAHAKDIKEASSLNLKDFMAFKYRIPGIEITGHRGEGEXXXXXXXXXXXRETREEDETHMIPPFVHVKGILRCVLVTETSETFQTAEIDQLGLLANLQALVGISTDIMAQAGNGCVSMSLESS-SNSRILIWRIDAWTLVIAVHK 672
QPRL+GSL+TAM+EFS G+ V+Y++ V VT+V NEA+ FCA+FHD DGA+F IA+EIL AF+ A ++ N++ F F RI GI R + + ++ +GIL+ + V + S TAE+DQ+G+LANLQ LV S D+MA N S++++SS S +I +D TL++ VH+
Sbjct: 26 QPRLIGSLMTAMLEFSAKVTGLPVSYIKFAKVAVTVVSNEAAKVFCAMFHDPSDGASFSSFIANEILEAFIVEFAAELGNVGH-NVRQFDRFHLRIVGI--------------------IRHSIQR----LLKQLQQQRGILKAIFVADGSIIHATAEVDQIGVLANLQVLVNASLDMMAAVNNTVNSVTIQSSRSTCTEVIHVVDDGTLIV-VHR 215 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13003.2470.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig13003.2470.1 >prot_Ecto-sp13_S_contig13003.2470.1 ID=prot_Ecto-sp13_S_contig13003.2470.1|Name=mRNA_Ecto-sp13_S_contig13003.2470.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=225bp IFTRERKTWQPRLLGSLLTAMVEFSKVAAGMQVAYVELTGVGVTLVGNEAback to top mRNA from alignment at Ecto-sp13_S_contig13003:1492..4739- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig13003.2470.1 ID=mRNA_Ecto-sp13_S_contig13003.2470.1|Name=mRNA_Ecto-sp13_S_contig13003.2470.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3248bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13003:1492..4739- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig13003:1492..4739- >mRNA_Ecto-sp13_S_contig13003.2470.1 ID=mRNA_Ecto-sp13_S_contig13003.2470.1|Name=mRNA_Ecto-sp13_S_contig13003.2470.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=675bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13003:1492..4739- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |