mRNA_Ecto-sp13_S_contig12958.2427.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig12958.2427.1 vs. uniprot
Match: A0A6H5KA25_9PHAE (Hydrolase_4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KA25_9PHAE) HSP 1 Score: 472 bits (1215), Expect = 1.190e-161 Identity = 286/309 (92.56%), Postives = 287/309 (92.88%), Query Frame = 1
Query: 46 ITGELVQNGLAELGESTASEGRCVLMGHSMGCITAATTALDPSLPPHLTTLVLVAPALSLPRKITAEQRRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCSEDELLRGGGSRTGAGSSARGGVGAVVEAPASAAQAVLHAGVWLFNWCLLPMIYPLEILGLRTLAYSGNFWRGALRKVWVDQAGVDLDVINRYRWPTLVRYWDRGFALFLLDRLQIGAGGRAGPSGLVEAVAAKAAQGMKVIVIQGDKDTLVSSKKAKAITDAIPRAKLLLLTECGHVPHEERPDDFLRLVLEQISPGDGGGGDG 972
ITG LVQNGL ELGESTASEGRCVLMGHSMGCITAATTALDPSLPPH TTLVLVAPALSLPRKITAEQRRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX RT AGSSARG VGAVV APASAAQAVLHAGVWLFNWCLLPMIYPLEILGLRTLAYSGNFWRGALRK WVDQAGVDLDV+NRYRWPTLVRYWDRGFALFLLDRLQIGAGGRAGPSGLVEAVAAKAAQGMKVIVIQGDKDTLVSSKKAKAITDAIP A LLLL ECGHVPHEERPDDFLRLVLEQISPGDGGGGDG
Sbjct: 267 ITGNLVQNGLEELGESTASEGRCVLMGHSMGCITAATTALDPSLPPHHTTLVLVAPALSLPRKITAEQRRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-XRTDAGSSARGRVGAVVGAPASAAQAVLHAGVWLFNWCLLPMIYPLEILGLRTLAYSGNFWRGALRKAWVDQAGVDLDVVNRYRWPTLVRYWDRGFALFLLDRLQIGAGGRAGPSGLVEAVAAKAAQGMKVIVIQGDKDTLVSSKKAKAITDAIPGATLLLLPECGHVPHEERPDDFLRLVLEQISPGDGGGGDG 574
BLAST of mRNA_Ecto-sp13_S_contig12958.2427.1 vs. uniprot
Match: D7FPL0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPL0_ECTSI) HSP 1 Score: 356 bits (914), Expect = 2.670e-120 Identity = 182/194 (93.81%), Postives = 183/194 (94.33%), Query Frame = 1
Query: 397 GAGSSARGGVGAVVEAPASAAQAVLHAGVWLFNWCLLPMIYPLEILGLRTLAYSGNFWRGALRKVWVDQAGVDLDVINRYRWPTLVRYWDRGFALFLLDRLQIGAGGRAGPSGLVEAVAAKAAQGMKVIVIQGDKDTLVSSKKAKAITDAIPRAKLLLLTECGHVPHEERPDDFLRLVLEQISPGDGGGGDGDA 978
GAGSSARGGVGAVV APASAAQAVLHAGVWLFNWCLLPMIYPLEILGLRTLAYSGNFWR ALRKVWVDQAGVDLDVINRYRWPTLVRYWDRGFALFLLDRLQIGAGGRAGPSGLVEAVA KAAQGMKVIVIQGDKDTLVSS KAKAI DAIP AKLLLL ECGHVPHEERPDDFLRLVLEQISP GG GD D+
Sbjct: 90 GAGSSARGGVGAVVGAPASAAQAVLHAGVWLFNWCLLPMIYPLEILGLRTLAYSGNFWRRALRKVWVDQAGVDLDVINRYRWPTLVRYWDRGFALFLLDRLQIGAGGRAGPSGLVEAVAVKAAQGMKVIVIQGDKDTLVSSNKAKAIADAIPGAKLLLLPECGHVPHEERPDDFLRLVLEQISPASGGDGDTDS 283
BLAST of mRNA_Ecto-sp13_S_contig12958.2427.1 vs. uniprot
Match: A0A835YWI6_9STRA (Alpha/Beta hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWI6_9STRA) HSP 1 Score: 156 bits (395), Expect = 4.790e-40 Identity = 112/302 (37.09%), Postives = 147/302 (48.68%), Query Frame = 1
Query: 61 VQNGLAELGESTA-SEG---RCVLMGHSMGCITAATTALDPSLPPHLTTLVLVAPALSLPRKITAEQRRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCSEDELLRGGGSRTGAGSSARGGVGAVVEAPASAAQAVLHAGVWLFNWCLLPMIYPLEILGLRTLAYSGNFWRGALRKVWVDQAGVDLDVINRYRWPTLVRYWDRGFALFLLDRLQIG--AGGRAGPSGLVEAVAAKAAQGMKVIVIQGDKDTLVSSKKAKAITDAIPRAKLLLLTECGHVPHEERPDDFLRLVLEQISP 948
+ L + G+S + SEG +L GHSMG +TAA A+ P TTLVLVAPAL+ + A A XXXX LR G R A +L+ LLP+ PL L L + YSG FWR L+K W D+AGV L+V+NRYRWP+LVR WDRG ALF+L + + A LV A+ KA GM++I+I G +D LVS+ ++A+ IP L+ L CGHVPHEE PD FL ++ ++SP
Sbjct: 241 ITRALLKPGDSGSDSEGGHKHTILFGHSMGGVTAALAAVGAEFEPRYTTLVLVAPALTAVTRTPATTNLAAAXXXXAPPSPQQRRARLSMLAAPFRG-----------LRSAGER---------------------------AARFLYRRALLPVASPLVALSLHPIVYSGAFWRTGLQKAWFDKAGVGLEVVNRYRWPSLVRRWDRGLALFVLSQSRWSKVAHSDTPEEPLVAALKRKADAGMRIILIHGAQDPLVSAASSRALKSLIPAIDLVELQNCGHVPHEEMPDAFLDVLAARLSP 504
BLAST of mRNA_Ecto-sp13_S_contig12958.2427.1 vs. uniprot
Match: A0A5J4YFE0_9CHLO (AB hydrolase-1 domain-containing protein n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4YFE0_9CHLO) HSP 1 Score: 83.6 bits (205), Expect = 3.790e-14 Identity = 54/178 (30.34%), Postives = 86/178 (48.31%), Query Frame = 1
Query: 427 GAVVEAPASAAQAVLHAGVWLFNWCLLPMIYPLEILGLRTLAYSGNFWRGALRKVWVDQAGVDLDVINRYRWPTLVRYWDRGFALFL----------LDRLQIGAGGRAGPSGLVEAVAAKAAQGMKVIVIQGDKDTLVSSKKAKAITDAIPRAKLLLLTECGHVPHEERPDDFLRLV 930
G +++ + AQAV + W L P++ +L LRTL S FW L W + GV ++++ YR P LV+ W+ G F+ + L+ GR S + A A Q +KV+++ G D LV ++ + +P A+L+ +CGHVP EE P F++ V
Sbjct: 307 GRILQVLMAFAQAVGTRTAGIVLWLLQPIL----VLFLRTLVRSRLFWVRGLSNAWHSRDGVSDELVDAYRLPQLVKGWEIGLVRFVRAQVADSRTFVQVLKDAYNGRTPLSQAEQLAHAVAQQDIKVLILHGSGDRLVPVSNSRRLAKLMPNAELIEYVDCGHVPQEELPKQFIQSV 480
BLAST of mRNA_Ecto-sp13_S_contig12958.2427.1 vs. uniprot
Match: W1P351_AMBTC (AB hydrolase-1 domain-containing protein n=2 Tax=Amborella trichopoda TaxID=13333 RepID=W1P351_AMBTC) HSP 1 Score: 79.3 bits (194), Expect = 1.050e-12 Identity = 73/286 (25.52%), Postives = 109/286 (38.11%), Query Frame = 1
Query: 94 TASEGRCVLMGHSMGCITAATTALDPSLPPHLTTLVLVAPALS---LPRKITAEQRRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCSED--ELLRGGGSRTGAGSSARGGVGAVVEAPASAAQAVLHAGVWLFNWCLLPMIYPLEILGLRTLAYSGNFWRGALRKVWVDQAGVDLDVINRYRWPTLVRYWDRGFALFLLDRLQIGAGGRAGP--SGLVEAVAAKAAQGMKVIVIQGDKDTLVSSKKAKAITDAIPRAKLLLLTECGHVPHEERPDDFLRLV 930
T G+ +LMGHS GC+ A T + P + L+LVAPA+ LP+K+ + + + LLRG ++ LF L ++ L L + F A+R W D V +V+ Y P R WDR +++ L G P L E V++I GD D LV +K AK ++ AIP ++ ++ CGH+PHEERP++FL +V
Sbjct: 251 TLKTGKAILMGHSAGCLVAVNTYFEA--PERIAALILVAPAILAPLLPQKVVRKDQVGEEIQMVDDGFPSNNQENLFSWIGKILSKLCSYVANTLMRLLRG----------------------------MMDMVSGLFRNVLCAILRSRFALALVRIIID-KFGIAAVRNAWYDVNRVTDEVLRGYIKPLRTRSWDRALLEYMISMLMDSTSGSKPPLQKRLAEITC-------PVLIITGDSDRLVPAKNAKRLSIAIPGSQFEVIKNCGHLPHEERPEEFLCIV 498
BLAST of mRNA_Ecto-sp13_S_contig12958.2427.1 vs. uniprot
Match: A0A0S8KNF3_9CHLR (AB hydrolase-1 domain-containing protein (Fragment) n=1 Tax=Anaerolineae bacterium SM23_84 TaxID=1703388 RepID=A0A0S8KNF3_9CHLR) HSP 1 Score: 72.4 bits (176), Expect = 6.830e-12 Identity = 48/151 (31.79%), Postives = 75/151 (49.67%), Query Frame = 1
Query: 493 NWCL-LPMIYPLEILGLRTLAYSGNFWRGALRKVWVDQAGVDLDVINRYRWPTLVRYWDRGFALFLLDRLQIGAGGRAGPSGLVEAVAAKAAQGMKVIVIQGDKDTLVSSKKAKAITDAIPRAKLLLLTECGHVPHEERPDDFLRLVLEQI 942
W L LP I + LG +++ AL W D + + +V+ Y+ P V WDR F F+L AG G G +E +A M +VI GD DT V + ++ + +P A+L ++ CGHV HEE P++F++ V + +
Sbjct: 6 RWLLRLPQI---QRLGPLLVSHLVPRLESALPTAWHDPSKISPEVVTGYKKPLRVDNWDRAFWEFVL------AGRPLGLEGQLERIA------MPALVITGDDDTWVPTAQSVRLAGKLPGAELAVIPNCGHVSHEECPEEFMQAVAQFV 141
BLAST of mRNA_Ecto-sp13_S_contig12958.2427.1 vs. uniprot
Match: A0A7R9TQM1_MICPS (Hypothetical protein n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7R9TQM1_MICPS) HSP 1 Score: 76.6 bits (187), Expect = 7.860e-12 Identity = 57/181 (31.49%), Postives = 84/181 (46.41%), Query Frame = 1
Query: 520 PLEILGLRTLAYSGNFWRGAL--------RKVWVDQAGVDLDVINRYRWPTLVRYWDRGFALFLLDRLQIGAGGRAGPSGLVEAVAAK-------------------AAQGMKVIVIQGDKDTLVSSKKAKAITDAIPRAKLLLLTECGHVPHEERPDDFLRLVLEQISPGDGGGGDGDAA 981
P +L LR + + FWR L R+V D D + YR P++V WDRG A +L GG G + A + A G +V+++ GD+D +V ++ + A+PRA+L+++ CGH+PHEE PD FL V + G+ GG DGD A
Sbjct: 307 PFLVLFLRKIVRNAAFWREGLASAVGSPMRRVMRD----DRSWTDGYRRPSVVTGWDRGMARVVLSAAT---GGLDGVAATARDGARRVXXXXXXXXXXXXXXXXXLARSGARVLIVHGDEDVIVPRSNSEKLAAALPRAELVVVRGCGHMPHEECPDVFLDAVRAFLRKGERGG-DGDDA 479
BLAST of mRNA_Ecto-sp13_S_contig12958.2427.1 vs. uniprot
Match: A0A3N5G3S0_9CHLR (Alpha/beta hydrolase n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A3N5G3S0_9CHLR) HSP 1 Score: 74.7 bits (182), Expect = 1.660e-11 Identity = 45/133 (33.83%), Postives = 67/133 (50.38%), Query Frame = 1
Query: 538 LRTLAYSGNFWRGALRKVWVDQAGVDLDVINRYRWPTLVRYWDRGFALFLLDRLQIGAGGRAGPSGLVEAVAAKAAQGMKVIVIQGDKDTLVSSKKAKAITDAIPRAKLLLLTECGHVPHEERPDDFLRLVLE 936
+R +A SGN +R W + A + D + YR P WDR F + A P L + + A M V+VI GD D +V ++ + + D IP A L ++ CGHVPHEE+P +F++LV +
Sbjct: 198 VRDIASSGN---DTIRLAWHEPAKISQDTFDGYRKPLRANNWDRALWEFTIA---------ARPLNLADRLGELA---MPVLVISGDDDRIVPTQSSIDLADKIPGAVLRIIPGCGHVPHEEKPAEFVQLVQD 315
BLAST of mRNA_Ecto-sp13_S_contig12958.2427.1 vs. uniprot
Match: A0A7J8YFS5_GOSAI (Hydrolase_4 domain-containing protein n=1 Tax=Gossypium aridum TaxID=34290 RepID=A0A7J8YFS5_GOSAI) HSP 1 Score: 70.1 bits (170), Expect = 3.390e-10 Identity = 45/162 (27.78%), Postives = 77/162 (47.53%), Query Frame = 1
Query: 502 LLPMIYPLEILGLRTLAYS--------GNFWRGALRKVWVDQAGVDLDVINRYRWPTLVRYWDRGFALFLLDRLQIGAGGRAGP-SGLVEAVAAKAAQGMKVIVIQGDKDTLVSSKKAKAITDAIPRAKLLLLTECGHVPHEERPDDFLRLVLEQISPGDGG 960
+L +Y +L + A++ F A+R W D VD +I+ Y P + WD+ F L G P S + ++ V+++ G+ D +V S A+ ++ AIP +KL ++ CGH+PHEE+ D+F+R+V + + GG
Sbjct: 93 MLKSLYKKALLSVLRSAFAVMLVRMIIDKFGVAAVRTAWYDSKQVDEHIIDGYTKPLRTKGWDKALVEFTAAMLAKGESETKPPLSKRLHEISCP------VLIVTGNADRIVPSWNAERLSRAIPHSKLEVIKNCGHLPHEEKVDEFVRVVEKFLQRAFGG 248
BLAST of mRNA_Ecto-sp13_S_contig12958.2427.1 vs. uniprot
Match: C1N7C8_MICPC (Predicted protein n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1N7C8_MICPC) HSP 1 Score: 68.9 bits (167), Expect = 7.150e-10 Identity = 57/181 (31.49%), Postives = 81/181 (44.75%), Query Frame = 1
Query: 520 PLEILGLRTLAYSGNFWRGAL--------RKVWVDQAGVDLDVINRYRWPTLVRYWDRGFALFLLDRLQIGAGGRAGPSGLVEAVAAK-------------------AAQGMKVIVIQGDKDTLVSSKKAKAITDAIPRAKLLLLTECGHVPHEERPDDFLRLVLEQISPGDGGGGDGDAA 981
P +L LR + + FWR L R+V D D + YR P++V WDRG A +L GG G + A + A G +V+++ GD+D +V A+PRA+L+++ CGH+PHEE PD FL V + G+ GG DGD A
Sbjct: 72 PFLVLFLRKIVRNAAFWREGLASAVGSPMRRVMRD----DRSWTDGYRRPSVVTGWDRGMARVVLSAAT---GGLDGVAATARDGARRVXXXXXXXXXXXXXXXXXLARSGARVLIVHGDEDVIVP---------ALPRAELVVVRGCGHMPHEECPDVFLDAVRAFLRKGERGG-DGDDA 235 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12958.2427.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig12958.2427.1 >prot_Ecto-sp13_S_contig12958.2427.1 ID=prot_Ecto-sp13_S_contig12958.2427.1|Name=mRNA_Ecto-sp13_S_contig12958.2427.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=328bp YFTFLASFIPLVSPVITGELVQNGLAELGESTASEGRCVLMGHSMGCITAback to top mRNA from alignment at Ecto-sp13_S_contig12958:902..4714+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig12958.2427.1 ID=mRNA_Ecto-sp13_S_contig12958.2427.1|Name=mRNA_Ecto-sp13_S_contig12958.2427.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3813bp|location=Sequence derived from alignment at Ecto-sp13_S_contig12958:902..4714+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig12958:902..4714+ >mRNA_Ecto-sp13_S_contig12958.2427.1 ID=mRNA_Ecto-sp13_S_contig12958.2427.1|Name=mRNA_Ecto-sp13_S_contig12958.2427.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=984bp|location=Sequence derived from alignment at Ecto-sp13_S_contig12958:902..4714+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |