mRNA_Ecto-sp13_S_contig12886.2374.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig12886.2374.1 vs. uniprot
Match: A0A6H5JA52_9PHAE (UBC core domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JA52_9PHAE) HSP 1 Score: 315 bits (807), Expect = 9.190e-108 Identity = 157/161 (97.52%), Postives = 158/161 (98.14%), Query Frame = 1
Query: 1 MIRLKKKQDDEKAAEAAAAMEVDEETPSNADAQPKAGEEKAGGKLHVLGIGGRRAKRGSAKATGTKKTPGEIRIQKDIADLDGGSVAEITFPNPNNLTSFKVKVQPDSGFWKGASYHFTFTIPALYPHDPPKVLCETKIYHPNINLQGNVCLNILREDWKP 483
MIRLKKKQDDEKAAEAAAAME+DEETPSNA AQPKA EEKA GKLHVLGIGGRRAKRGSAKATGTKKTPGEIRIQKDIADLDGGSVAEITFPNPNNLTSFKVKVQPDSGFWKGASYHFTFTIPALYPHDPPKVLCETKIYHPNINLQGNVCLNILREDWKP
Sbjct: 1 MIRLKKKQDDEKAAEAAAAMEIDEETPSNAAAQPKADEEKAAGKLHVLGIGGRRAKRGSAKATGTKKTPGEIRIQKDIADLDGGSVAEITFPNPNNLTSFKVKVQPDSGFWKGASYHFTFTIPALYPHDPPKVLCETKIYHPNINLQGNVCLNILREDWKP 161
BLAST of mRNA_Ecto-sp13_S_contig12886.2374.1 vs. uniprot
Match: A0A6V1TYK4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1TYK4_HETAK) HSP 1 Score: 211 bits (538), Expect = 1.040e-66 Identity = 106/171 (61.99%), Postives = 134/171 (78.36%), Query Frame = 1
Query: 1 MIRLKKKQDDEKAAEA----AAAMEVDEETPSNADA------QPKAGEEKAGGKLHVLGIGGRRAKRGSAKATGTKKTPGEIRIQKDIADLDGGSVAEITFPNPNNLTSFKVKVQPDSGFWKGASYHFTFTIPALYPHDPPKVLCETKIYHPNINLQGNVCLNILREDWKP 483
MIRLKKKQ++ + + AM+V++E+ + DA + K GE K+ G + +LGIGG++++ G AK T K+TPGE+RIQKDIA+LDGG+VA ITFPNPNNLTSF+V+V PD+G W+GA+YHFTF IPA+YPH+PPKV C TKIYHPNINLQG VCLNILREDWKP
Sbjct: 1 MIRLKKKQEEAERXXXXXXXSEAMDVEQESTNGGDAKADDQDESKGGESKSSGGVKLLGIGGKKSRTGGAKKT-KKRTPGELRIQKDIAELDGGNVAVITFPNPNNLTSFEVRVTPDTGMWRGATYHFTFAIPAMYPHEPPKVHCHTKIYHPNINLQGKVCLNILREDWKP 170
BLAST of mRNA_Ecto-sp13_S_contig12886.2374.1 vs. uniprot
Match: A0A7S4A5T5_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A5T5_9STRA) HSP 1 Score: 200 bits (508), Expect = 1.150e-62 Identity = 108/163 (66.26%), Postives = 125/163 (76.69%), Query Frame = 1
Query: 1 MIRLKKKQDDEKAAEAAAAMEVDEETPSNADAQPKAGEEKAGGKLHVLGIGGRRAKRGSAKATGTKK--TPGEIRIQKDIADLDGGSVAEITFPNPNNLTSFKVKVQPDSGFWKGASYHFTFTIPALYPHDPPKVLCETKIYHPNINLQGNVCLNILREDWKP 483
MIRLKKK AAAA + DE+ ADA GEEK + +LGIGGR+ AKATG+KK TPGEIRIQKDIA+LDGG VA+I FPN N+LT F V V PD+GFWKGA+YHFTFTIPA+YPH+PPKV C+TKI+HPNINL+GNVCLNILR+DWKP
Sbjct: 1 MIRLKKK--------AAAAPKEDEKM---ADAPKTNGEEK----VSILGIGGRKV----AKATGSKKRKTPGEIRIQKDIAELDGGDVAQIKFPNANDLTKFNVIVTPDTGFWKGATYHFTFTIPAMYPHEPPKVHCDTKIFHPNINLEGNVCLNILRQDWKP 144
BLAST of mRNA_Ecto-sp13_S_contig12886.2374.1 vs. uniprot
Match: A0A7S3M2N2_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M2N2_9STRA) HSP 1 Score: 198 bits (504), Expect = 1.060e-61 Identity = 105/164 (64.02%), Postives = 125/164 (76.22%), Query Frame = 1
Query: 1 MIRLKKKQD---DEKAAEAAAAMEVDEETPSNADAQPKAGEEKAGGKLHVLGIGGRRAKRGSAKATGTKKTPGEIRIQKDIADLDGGSVAEITFPNPNNLTSFKVKVQPDSGFWKGASYHFTFTIPALYPHDPPKVLCETKIYHPNINLQGNVCLNILREDWKP 483
MIR++KK EK AE +A V+ +P N +PK EE+ G L +LGIGG++ K G+ KA G K+TPGEIRIQKDIA+LDGGSVA++ FPNPN+LT+F V V PDSGFW GA Y FT IPALYPH+PPKV C TKIYHPNINL+GNVCLNILRE+WKP
Sbjct: 1 MIRMQKKPAPVVSEKVAEDESA--VNGNSPVNVAGEPK--EEEGAGGLSLLGIGGKQIKSGAKKA-GKKRTPGEIRIQKDIAELDGGSVAQVDFPNPNDLTNFTVTVSPDSGFWSGAKYVFTVAIPALYPHEPPKVTCRTKIYHPNINLEGNVCLNILREEWKP 159
BLAST of mRNA_Ecto-sp13_S_contig12886.2374.1 vs. uniprot
Match: A0A835YZU8_9STRA (Ubiquitin-conjugating enzyme/RWD-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZU8_9STRA) HSP 1 Score: 196 bits (498), Expect = 5.740e-61 Identity = 94/120 (78.33%), Postives = 104/120 (86.67%), Query Frame = 1
Query: 124 GGKLHVLGIGGRRAKRGSAKATGTKKTPGEIRIQKDIADLDGGSVAEITFPNPNNLTSFKVKVQPDSGFWKGASYHFTFTIPALYPHDPPKVLCETKIYHPNINLQGNVCLNILREDWKP 483
GG + +LGIGGRR K+ + KA KKTPGEIRIQKDIA+LDGG+VA ITFP+PNNL F+V V PDSG+WKGASY+FTFTIP YPHDPPKVLC TKIYHPNINLQGNVCLNILREDWKP
Sbjct: 29 GGGVKLLGIGGRRTKK-TGKAP-PKKTPGEIRIQKDIAELDGGTVATITFPDPNNLCKFEVLVTPDSGYWKGASYNFTFTIPGHYPHDPPKVLCNTKIYHPNINLQGNVCLNILREDWKP 146
BLAST of mRNA_Ecto-sp13_S_contig12886.2374.1 vs. uniprot
Match: F0YAW6_AURAN (UBC core domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YAW6_AURAN) HSP 1 Score: 192 bits (487), Expect = 2.080e-59 Identity = 102/163 (62.58%), Postives = 122/163 (74.85%), Query Frame = 1
Query: 1 MIRLKKKQDDEKAAEAAAAMEVDEETPSNADAQPKAGEEKAGGKLHVLGIGGRRAKRGSAKATGTKK--TPGEIRIQKDIADLDGGSVAEITFPNPNNLTSFKVKVQPDSGFWKGASYHFTFTIPALYPHDPPKVLCETKIYHPNINLQGNVCLNILREDWKP 483
MIRLKKK A A + DE P DA P GE++ K+ +LGIGG++ +K TG+KK TPGEIRIQKDIA+LDGG VA I FPN N+LT F V V PD+GFWKGA+YHFTF+IPA+YPH+PPKV C+TKI+HPNINL+GNVCLNILR+DWKP
Sbjct: 1 MIRLKKKSTP---APEPTAAKADEAMP---DAAPAEGEKE---KVSILGIGGKKM----SKGTGSKKRKTPGEIRIQKDIAELDGGDVAVINFPNANDLTKFHVVVTPDTGFWKGATYHFTFSIPAMYPHEPPKVHCDTKIFHPNINLEGNVCLNILRQDWKP 150
BLAST of mRNA_Ecto-sp13_S_contig12886.2374.1 vs. uniprot
Match: B7G8G3_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G8G3_PHATC) HSP 1 Score: 192 bits (487), Expect = 4.030e-59 Identity = 99/162 (61.11%), Postives = 121/162 (74.69%), Query Frame = 1
Query: 1 MIRLKKKQDDEKAAEAAAAMEVDEETPSNADAQPKAGEEKAGGKLHVLGIGGRR-AKRGSAKATGTKKTPGEIRIQKDIADLDGGSVAEITFPNPNNLTSFKVKVQPDSGFWKGASYHFTFTIPALYPHDPPKVLCETKIYHPNINLQGNVCLNILREDWKP 483
M+ LKKK+++ KAA AAA + D +TP + K+ +LG+GG++ K G KAT K++PGEIRIQKDIA+LDGG+VA I FPN N+LTSF V + PDSG+WKGA+YHFTFTIP YPH PPKV C+TKIYHPNI+LQG VCLNILREDWKP
Sbjct: 1 MLALKKKREEAKAAAEAAAKDADADTPIVDSGVGTHSPDN--NKVSLLGVGGKKQTKNGECKAT-KKRSPGEIRIQKDIAELDGGNVATIDFPNANDLTSFHVAISPDSGYWKGATYHFTFTIPPHYPHSPPKVECQTKIYHPNIDLQGKVCLNILREDWKP 159
BLAST of mRNA_Ecto-sp13_S_contig12886.2374.1 vs. uniprot
Match: A0A812Y6Z6_SYMMI (UbcE2M protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812Y6Z6_SYMMI) HSP 1 Score: 189 bits (481), Expect = 2.250e-58 Identity = 95/170 (55.88%), Postives = 119/170 (70.00%), Query Frame = 1
Query: 1 MIRLKKKQDDEKAAEAAAAM---------EVDEETPSNADAQPKAGEEKAGGKLHVLGIGGRRAKRGSAKATGTKKTPGEIRIQKDIADLDGGSVAEITFPNPNNLTSFKVKVQPDSGFWKGASYHFTFTIPALYPHDPPKVLCETKIYHPNINLQGNVCLNILREDWKP 483
MIRLKKK +EK EA A E+ A+A+ A + AGG + GIGG+ ++ AK TG K+TPGE+R+QKDIADLD G +A++ FPNPN+LT+F V V PDSG W+GA+YHFTF IP YPH+PPKV C+TKIYHPNI+L G VCLNI++EDWKP
Sbjct: 1 MIRLKKKPAEEKKPEAVAVPAKACDGATEEMAASASPPAEAKGTAEGDSAGGFKLINGIGGKAVRKDGAKITGKKRTPGELRVQKDIADLDSGRIAKVNFPNPNDLTNFSVVVSPDSGLWQGATYHFTFEIPPNYPHEPPKVTCQTKIYHPNIDLMGKVCLNIIKEDWKP 170
BLAST of mRNA_Ecto-sp13_S_contig12886.2374.1 vs. uniprot
Match: A0A1Z5K9J7_FISSO (Ubiquitin-conjugating enzyme E2 M n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K9J7_FISSO) HSP 1 Score: 186 bits (473), Expect = 4.870e-57 Identity = 99/165 (60.00%), Postives = 119/165 (72.12%), Query Frame = 1
Query: 1 MIRLKKKQDDEKAAEAAAAMEVDEETPSNADA---QPKAGEEKAGGKLHVLGIGGRR-AKRGSAKATGTKKTPGEIRIQKDIADLDGGSVAEITFPNPNNLTSFKVKVQPDSGFWKGASYHFTFTIPALYPHDPPKVLCETKIYHPNINLQGNVCLNILREDWKP 483
M+ LKKK++ E A +AA + E P+ A+A QP+ K+ +LGIGG++ K G + TG K+TPGEIRIQ DIA+LDGG VA I FPNPN+LT F V V PD+G WKGA+YHFTFTIP YPH PP+V C TKIYHPNI+LQG VCLNILREDWKP
Sbjct: 1 MLALKKKREAE-AKKAAEESKQQAEQPTTAEAPADQPR--------KVSLLGIGGKKMVKNGESGMTGKKRTPGEIRIQTDIAELDGGDVATIKFPNPNDLTLFDVSVTPDTGLWKGATYHFTFTIPPHYPHSPPRVECNTKIYHPNIDLQGKVCLNILREDWKP 156
BLAST of mRNA_Ecto-sp13_S_contig12886.2374.1 vs. uniprot
Match: A0A7S3KW38_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3KW38_9STRA) HSP 1 Score: 183 bits (464), Expect = 1.030e-55 Identity = 82/119 (68.91%), Postives = 100/119 (84.03%), Query Frame = 1
Query: 130 KLHVLGIGGRRAKRGSAKATGTKK-TPGEIRIQKDIADLDGGSVAEITFPNPNNLTSFKVKVQPDSGFWKGASYHFTFTIPALYPHDPPKVLCETKIYHPNINLQGNVCLNILREDWKP 483
K+ +LG+GG++ K + TG KK TPGEIRIQKDIA+LDGG VA I FPNPN+LT+F V+V PDSG+W+GA+YHF+F +P+ YPH+PPKV C TKIYHPNI+LQG VCLNILREDWKP
Sbjct: 35 KVSLLGVGGKKKKNENGSGTGGKKRTPGEIRIQKDIAELDGGKVATIEFPNPNDLTAFDVRVCPDSGYWQGATYHFSFNVPSHYPHEPPKVECHTKIYHPNIDLQGKVCLNILREDWKP 153 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12886.2374.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig12886.2374.1 >prot_Ecto-sp13_S_contig12886.2374.1 ID=prot_Ecto-sp13_S_contig12886.2374.1|Name=mRNA_Ecto-sp13_S_contig12886.2374.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=161bp MIRLKKKQDDEKAAEAAAAMEVDEETPSNADAQPKAGEEKAGGKLHVLGIback to top mRNA from alignment at Ecto-sp13_S_contig12886:1..2332- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig12886.2374.1 ID=mRNA_Ecto-sp13_S_contig12886.2374.1|Name=mRNA_Ecto-sp13_S_contig12886.2374.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2332bp|location=Sequence derived from alignment at Ecto-sp13_S_contig12886:1..2332- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig12886:1..2332- >mRNA_Ecto-sp13_S_contig12886.2374.1 ID=mRNA_Ecto-sp13_S_contig12886.2374.1|Name=mRNA_Ecto-sp13_S_contig12886.2374.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=483bp|location=Sequence derived from alignment at Ecto-sp13_S_contig12886:1..2332- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |