mRNA_Ecto-sp13_S_contig1279.2306.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1279.2306.1 vs. uniprot
Match: A0A6H5KK30_9PHAE (RNase NYN domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KK30_9PHAE) HSP 1 Score: 1354 bits (3505), Expect = 0.000e+0 Identity = 726/842 (86.22%), Postives = 752/842 (89.31%), Query Frame = 3
Query: 447 MDWTPAAVGSSSPSAANYGESTGMVRASPDEMMVSASTGRSVAPPRDLADFPREHAATTAGTPLGGHSGQRGRDGVVVHQAVGSDAAVTVPSRYHRPEGGRDREKTLPAWMAAGPTALPDGRQQQLTPVAKAPTQTPRSIGLYSSSPQQGAPSKQQAGQNDGDRNSRANINNRHRNNYDEEPHRSSGARATPDMSTLYATPRESRNDTPATRTPTTAXXRPSANPQSAGRGRGRERTLPAWMTAAEATPPGGLQQQAAPGTTSGRRVPGPTGLFSSCPQQITQTTAHSRYSMKNTSSEDHQTAKAEATGTFHMGVG--GNPQRQRRAPGGQGSSHGMFETLREQYPGSAGVSMAGASGARPTTHHQRLSATVAGHGRRLKVRRWVRAGTRDDDAPGALRPYEEGASDSVPRASRPTGSYSSRPGHRTQGAFPNSSGSSRYKAGTNRKGRRAAGIGTHQPERSASTNPEIGSWHANAERIDGQSPVPAGTVGLNGAPERGLLVADPSSQHQELATTAGEERGGGQSRPKRGREEEPGMPSTGSVSRARGGASGQQPAGLGGLLDVIRRTASMNLQPPAKKNKVALSKSSPPKNLVATRARFQIVHXXXXXXXXXXXXXXXXXXLVAQRSKLPTLNTAGEARGTSKSKGSSRLPLAGAALSSRPSRSTTPKKVVIDGNDVALCHRGADGQWSAQGPLLAIQFFERHGVPCVAFLPRERMAGVSPRDGCNTAFQEARAKGAISEIPRGEKADLFILKYAIESKAHVVTNKKLSTHAAGNDALAFLGQTKQDLREYLSYYHVCYTFVRNDFKPDPETPFIRMLLSQAPAASRVTHAKAKGGGPTKP 2966
MDWTPA VGSSS SAANYGESTGMVRASPDEM V ASTGR+VAPPRD ADFPREHAATTAGTPLGG SGQRGR+GVV QAVGS AAVTV SR HRPEGGRD EKTLPAWMAAGP ALP+ RQQQ TPVA APTQTPR GLYSS PQQGAPSK+QAG NDGDRNSR+ I++R+RNNYDEEPHRS GA ATPD+ST YA RESRNDTPA RTP TA RPSANPQS GRGRGRERTLPAWMTAAEATPPGGLQQQ+APGTTS +VP PTG FSS PQ TQTTAH RYS+KNTSSED+QTA+A ATGTFH+GVG GN QRQ RAPGGQGSSHGMFETLREQYPGSAGVSMAG+SGARPTTHHQ L TV GH R LKVRRWVR TRDD APG LRPYEEGASDS+PRAS PTGSYSS PGHRTQGA PNS GSSRYKAGTNRKGRRAAGIGTHQPERSASTNPEIGSWHANAERIDGQSPVPAGTVGLNGAPERGLL+ADPSSQHQELATTAGEE GG QSRPKRGREEEPGM STGS SRARGGASG+QP+GLGGLLDVIRRTASMNLQPPAKKNKVALSKSSPPKNLVATRARFQIVH LVA RSKLPTLNTAGEARGTSKSKGSSR+PLAGAALSSRPSRSTTPKKVVIDGNDVALCHRGA GQWSAQG LLAIQFFER GVPCVAFLPRERMAGVSPRDGCNTAFQEARAKGAI+EIPRGEKADL ILKYAIESK HVVTNKKLSTHA N+ALAFLGQTKQDLREYLS+YHVCYTFVRNDFKP+PETPFIRMLL+QAPA SRVTHAK KGGGPTKP
Sbjct: 1 MDWTPATVGSSSSSAANYGESTGMVRASPDEMTVFASTGRNVAPPRDPADFPREHAATTAGTPLGGQSGQRGREGVVARQAVGSGAAVTVLSRNHRPEGGRDGEKTLPAWMAAGPAALPERRQQQATPVANAPTQTPRPTGLYSSRPQQGAPSKKQAGPNDGDRNSRSKISDRNRNNYDEEPHRSLGAGATPDVSTPYAMARESRNDTPAPRTPITAAPRPSANPQSVGRGRGRERTLPAWMTAAEATPPGGLQQQSAPGTTSAGQVPRPTGSFSSRPQPTTQTTAHGRYSIKNTSSEDNQTARAAATGTFHVGVGRHGNLQRQGRAPGGQGSSHGMFETLREQYPGSAGVSMAGSSGARPTTHHQSLFTTVVGHRRGLKVRRWVRGETRDDGAPGGLRPYEEGASDSLPRASLPTGSYSSHPGHRTQGAVPNSGGSSRYKAGTNRKGRRAAGIGTHQPERSASTNPEIGSWHANAERIDGQSPVPAGTVGLNGAPERGLLMADPSSQHQELATTAGEECGGEQSRPKRGREEEPGMDSTGSASRARGGASGRQPSGLGGLLDVIRRTASMNLQPPAKKNKVALSKSSPPKNLVATRARFQIVHHHDAPKQQQQQ-------LVAHRSKLPTLNTAGEARGTSKSKGSSRVPLAGAALSSRPSRSTTPKKVVIDGNDVALCHRGAHGQWSAQGALLAIQFFERRGVPCVAFLPRERMAGVSPRDGCNTAFQEARAKGAINEIPRGEKADLSILKYAIESKVHVVTNKKLSTHATSNEALAFLGQTKQDLREYLSHYHVCYTFVRNDFKPNPETPFIRMLLNQAPAGSRVTHAKGKGGGPTKP 835
BLAST of mRNA_Ecto-sp13_S_contig1279.2306.1 vs. uniprot
Match: D7FTX8_ECTSI (RNase NYN domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTX8_ECTSI) HSP 1 Score: 1248 bits (3228), Expect = 0.000e+0 Identity = 676/792 (85.35%), Postives = 694/792 (87.63%), Query Frame = 3
Query: 447 MDWTPAAVGSSSPSAANYGESTGMVRASPDEMMVSASTGRSVAPPRDLADFPREHAATTAGTPLGGHSGQRGRDGVVVHQAVGSDAAVTVPSRYHRPEGGRDREKTLPAWMAAGPTALPDGRQQQLTPVAKAPTQTPRSIGLYSSSPQQGAPSKQQAGQNDGDRNSRANINNRHRNNYDEEPHRSSGARATPDMSTLYATPRESRNDTPATRTPTTAXXRPSANPQSAGRGRGRERTLPAWMTAAEATPPGGLQQQAAPGTTSGRRVPGPTGLFSSCPQQITQTTAHSRYSMKNTSSEDHQTAKAEATGTFHMGVG--GNPQRQRRAPGGQGSSHGMFETLREQYPGSAGVSMAGASGARPTTHHQRLSATVAGHGRRLKVRRWVRAGTRDDDAPGALRPYEEGASDSVPRASRPTGSYSSRPGHRTQGAFPNSSGSSRYKAGTNRKGRRAAGIGTHQPERSASTNPEIGSWHANAERIDGQSPVPAGTVGLNGAPERGLLVADPSSQHQELATTAGEERGGGQSRPKRGREEEPGMPSTGSVSRARGGASGQQPAGLGGLLDVIRRTASMNLQPPAKKNKVALSKSSPPK-------------NLVATRARFQIVHXXXXXXXXXXXXXXXXXXLVAQRSKLPTLNTAGEARGTSKSKGSSRLPLAGAALSSRPSRSTTPKKVVIDGNDVALCHRGADGQWSAQGPLLAIQFFERHGVPCVAFLPRERMAGVSPRDGCNTAFQEARAKGAISEIPRGEKADLFILKYAIESKAHVVTNKKLSTHAAGNDAL 2777
MDWTPAAVGSSS SAANYGESTGMVRASPDEMMVSASTGR+VAPPRD ADFP EH+AT AGTPLGG SGQRGR+GVV HQ VGS AAV VPSR HRPEGGRDREKTLPAWMAAGP ALPDGRQQQ+TPVA APTQTPR GLYSS PQQGAPSKQ+AG +DGDRNSRANINNR+RNNYDEEPHRS GA ATPDMSTLYA RESRN TPA RTPTTA RPSA ERTLPAWMTAAEATPPGGLQQQ+APGTTSG RVP PTG FSSCPQQ TQTTAH RYS+KNTSSED+QTAKA ATGTFH+GVG GNPQRQRRAPGGQG SHG+FETLREQYPGSAGVSMAGASGARPTTHHQ LS+TVAGHGR LKVRRWVR GTRDD PG LRPYEEG DSVPRASRPTGSYSSRPGHRTQGA PNS GSSRYKAGTNRKGRRAAGIGT +PERSASTNPEIGSWH NAERIDGQSPVPAGTV LNGAPERGLLVADPSSQHQELATTAGEERGGGQSRPKRGREEEPGM STGSVSRARGG SG+QPAGLGGLLDVIRRTASMNLQPPAKKNKVALSKSSPPK NLVATRARFQIVH LVA RSKLPTLNTAGEAR TSKSKGSSR PLAGAALSSRPSRSTTPKKVVIDGNDVALCHRGADGQWSAQGPLLAIQFFE+ GVPCVAFLPRERMAGVSPRDGCNTAFQEARAKGAISEIPRGEK DLFILKYAIESK HVVTNK+LSTHAA N+ L
Sbjct: 1 MDWTPAAVGSSSSSAANYGESTGMVRASPDEMMVSASTGRNVAPPRDPADFPHEHSATAAGTPLGGQSGQRGREGVVAHQGVGSGAAVAVPSRNHRPEGGRDREKTLPAWMAAGPAALPDGRQQQVTPVANAPTQTPRPTGLYSSRPQQGAPSKQKAGPSDGDRNSRANINNRNRNNYDEEPHRSVGAGATPDMSTLYAMARESRNHTPAPRTPTTAAPRPSAXXXXXXXXXXXERTLPAWMTAAEATPPGGLQQQSAPGTTSGGRVPEPTGSFSSCPQQTTQTTAHGRYSVKNTSSEDNQTAKAAATGTFHVGVGHHGNPQRQRRAPGGQGISHGIFETLREQYPGSAGVSMAGASGARPTTHHQSLSSTVAGHGRGLKVRRWVRGGTRDDGTPGGLRPYEEGPFDSVPRASRPTGSYSSRPGHRTQGALPNSCGSSRYKAGTNRKGRRAAGIGTRRPERSASTNPEIGSWHTNAERIDGQSPVPAGTVDLNGAPERGLLVADPSSQHQELATTAGEERGGGQSRPKRGREEEPGMASTGSVSRARGGESGRQPAGLGGLLDVIRRTASMNLQPPAKKNKVALSKSSPPKFSASVPRTALSLQNLVATRARFQIVHHHDAPKQQQQ--------LVAHRSKLPTLNTAGEARRTSKSKGSSRAPLAGAALSSRPSRSTTPKKVVIDGNDVALCHRGADGQWSAQGPLLAIQFFEQRGVPCVAFLPRERMAGVSPRDGCNTAFQEARAKGAISEIPRGEKGDLFILKYAIESKVHVVTNKRLSTHAASNETL 784
BLAST of mRNA_Ecto-sp13_S_contig1279.2306.1 vs. uniprot
Match: D7FTY5_ECTSI (RNase NYN domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTY5_ECTSI) HSP 1 Score: 370 bits (949), Expect = 1.960e-107 Identity = 338/886 (38.15%), Postives = 413/886 (46.61%), Query Frame = 3
Query: 447 MDWTPAAVGSSSPSAANYGESTGMVRASPDEMMVSASTGRSVAPPRDLADFPREHAATTAGT--PLGGHSGQR--GRDGVVVHQAVGSDAAVTVPSRYHRPEGGRDREKTLPAWMAAGPTALPDG----------RQQQLTPVAKAPTQTPRSIGLYSS-SP-QQGAPSKQQAGQNDGDRNSRANINNRHRNNY---------DEEPHRSSGARATPDMSTLYATPRESRNDTPATRTPTTAXXRPSANPQSAGRGRGRERTLPAWMTAAEATPPGGLQQQAAPGTTSGRRVPGPTGLFSSCPQQITQTTAHSRYSMKNTSSEDHQTAKAEATGTFHMGVGGNPQRQRRAPGGQGSSHGMFETLREQYPGSAGVSMAGASGARPTTHHQRLSATVAGHGRRLKVRRWVRAGTRDDDAPGALRPYEEGASDSVPRASRPTGSYSSRPGHRTQ-GAFPNSSGSSRYKAGTNRKGRRAAGIGTHQPERSASTNPEIGSWHANAE--RIDGQS-------PVPAGTVGLNG-APERGLLVADPSSQHQELATTAGEERGGGQSRPKRGREEEPGMPSTGSVSRARGGASGQQPAGL--GGLLDVIRRTASMNLQPPAKKNKVALSKSSPPKNLVATRARFQIVHXXXXXXXXXXXXXXXXXXLVAQRSKLPTLNTAGEARGTSKSKGSSRLPLAGAALSSRPSRSTTPKK--------------VVIDGNDVALCHRGADGQWSAQGPLLAIQFFERHGVPCVAFLPRERMAGVSPRDGCNTAFQEARAKGAISEIPRGEKADLFILKYAIESKAHVVTNKKLSTHAAGNDALAFLGQTKQDLREYLSYYHVCYTFVRNDFKPDPETPFIRMLLSQAPAASRVTHAKAKG 2948
MDW PA V SS SA +GE G ASPD MVSA T + P D P A T + G SGQ G +GV +Q DAA T S RP GGR R++T P GP A QQQ A+ R + +S SP QQ APS Q D + H+ +G AT YA PA A RPS NP++A RGRGRE TLPAWMTA +ATPPGGLQ QA PGT S R+PGPTGL SS PQQ QTTAH KN S + + + T AS A PT +HQ S TVA HGR + V +G R + APG L+ + AS PR P G SSRP Q +F S S + K +K ++A T+ +W + A+ R DG + P PA TV N AP+ G + A + Q + T G G SRPKR REEE + R A GQQ ++D++RR ASM + KK K L S PK L+ATRARF+I+H K PT N A G ++S SS +P A L+ +PS TTPK+ VVIDG D+AL + D +WSA PLLAIQFF+ GVPCVAFLPRER+ GV+P+D TAF EAR++ AISEIP+G A LFILK+AIE+ A+VVTN +LS H A LA LGQTK +L YLS HV YTF +DF PDPE P I+M QA A++ +G
Sbjct: 1 MDWAPADVAPSSSSAVGFGEPAGKGTASPDATMVSAPTNN-LNPHADPGHHPPAPPAAAVATVSAIAGPSGQAHGGWEGVAGNQEGEPDAAATARSTDPRPAGGRGRDRTPPPRSTTGPAASNSAIIAVVDLRALHQQQQRARAECDDLVQRGLPTEASPSPSQQNAPSHGQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKDTDEHQPAGTGAT-----FYAPGSVPSGAWPAV----PATTRPSTNPRAA-RGRGREATLPAWMTATQATPPGGLQPQAGPGTNS--RMPGPTGLPSSGPQQGAQTTAHGDNKTKNKSEPNDKKTQGRGATTL------------------------------------------ASAAWPTDYHQETSTTVAVHGRGAPLGTTVPSGARTNAAPGGLQQQPQLASPRAPRP-LPAGLNSSRPKENNQIVSFGKGSASIQNKP---KKNXXXXXXXXXXXXQAAGTSTTQSAWPSPADLKRSDGSAIIQKLAGPAPAATVKSNHRAPKNGWVAAVGAFHGQGASKTVWAGGGSGPSRPKRNREEELTTAEITTRLRDPSKAPGQQQQQQTPDEMIDMVRRMASMGVATVPKKKKSTLDASREPKALIATRARFRIIHHHALPSQQQLVLY-----------KPPTFNIASGRSGATRSNQSSWVPPPRAPLAIKPSTWTTPKQPXXXXXXXXXXSPLVVIDGTDIALTYWRTDDRWSALQPLLAIQFFKERGVPCVAFLPRERVYGVTPQDDFYTAFHEARSRRAISEIPQGANASLFILKHAIENNAYVVTNAQLSGHIASPATLASLGQTKNELHSYLSRSHVRYTFAGDDFTPDPEAPLIKMFAKQASGANQTRGNTTRG 816
BLAST of mRNA_Ecto-sp13_S_contig1279.2306.1 vs. uniprot
Match: A0A6H5KJR8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJR8_9PHAE) HSP 1 Score: 266 bits (681), Expect = 2.780e-71 Identity = 261/740 (35.27%), Postives = 320/740 (43.24%), Query Frame = 3
Query: 1107 PSANPQSAGRGRGRERTLPAWMTAAEATPPGGLQQQAAPGTTSGRRVPGPTGLFSSCPQQITQTTAHSRYSMKNTSSEDHQTAKAEATGTFHMGVGGNPQRQRRAPGGQGSSHGMFETLREQYPGSAGVSMAGASGARPTTHHQRLSATVAGHGRRLKVRRWVRAGTRDDDAPGALRPYEEGASDSVPRASRPTGSYSSRPGHRTQGAFPNSSGSSRYKAGTNRKGRRAAGIGTHQPERSASTNP-EIGSWHANAERIDGQSPVPAGTVGLNG-APERGLLVADPSSQHQELATTAGEERGGGQSRPKRGREEEPGMPSTGSVSRARGG--ASGQQPAGL--GGLLDVIRRTASMNLQPPAKKNKVALSKSSPPK-------------------------------------------------------------NLVATRARFQIVHXXXXXXXXXXXXXXXXXXLVAQRSKL----PTLNTAGEARGTSKSKGSSRLPLAGAALSSRPSRSTTPKK--------VVIDGNDVALCHRGADGQWSAQGPLLAIQFFERHGVPCVAFLPRERMAGVSPRDGCN--------------------------------------------------------TAFQEARAKGAISEIPRGEKADLFILKYAIESKAHVVTNKKLSTHAAGNDALAFLGQTKQDLREYLSYYHVCYTFVRNDFKPDPETPFIRMLLSQAPAAS 2921
PS NP++A RGRGRE TLPAWMTA + TPPGGLQQQA PGT S R+PGP+G SS PQQ +T AH KN S + + + T AS A PT +HQ S TVAG+ R + V + + APG + + AS VPR P G SSRP Q AAG T Q SA +P ++ S NA I G P PA T N A E G + A + QE +TTA G G SRPKR REEE + +T +R R A GQQ ++D++RR ASM + KK K+ L SS PK L+ATRARF+I+H L +Q+ + PT N A G ++S SS P A A L+ +PS TTPK VV+DG D+AL + D +WSA PLLAIQFF+ GVPCVAFLPRER+ V+ +DG + TAF EAR++ AISEIP+G A LFILK AIE A+VVTN KLS H A LA LGQTK +L+ YLS HV YTF +DF PDPE P I+M QA A+
Sbjct: 169 PSTNPRAA-RGRGREATLPAWMTATQETPPGGLQQQAGPGTDS--RMPGPSGSHSSGPQQSARTKAHGDNKTKNESGPNDKKTQGRGATTL------------------------------------------ASAAWPTDYHQETSTTVAGNARGALLGTTVPSRACANAAPGGFQQQPQLASPRVPRP-LPAGLSSSRPEENNQ---------------------IAAGTSTTQ---SAWPSPAKLESSDGNAI-IAG--PAPAATAESNHRATEHGWVAAVGAFHGQEASTTAWAGSGSGPSRPKRNREEE--LTTTEITTRLRNPSKAPGQQQKQQTPDEMMDMVRRMASMGIATVPKKKKLTLDASSEPKVIFNIKLNNRAVARVRVLSFTPAVVLAYPVEHHNTLWVRLPNGGNPDGCGCCAGARNKKIVALIATRARFRIIHHHA---------------LPSQQQLVLYDPPTSNIASGRSGATRSNQSSWGPPARAPLAIKPSTWTTPKPXXXXXSPLVVLDGTDIALTYWRTDDRWSALQPLLAIQFFKEWGVPCVAFLPRERVCSVTLQDGGSPTSFEGGFLRSDLVHKDMRRPVVGVRAGSYSLLTFGMPRPNPFNPVGSSPLVTDFYTAFHEARSRRAISEIPQGANASLFILKRAIEHNAYVVTNAKLSGHIASPATLASLGQTKNELQSYLSRSHVRYTFAGDDFTPDPEAPLIKMFAKQASGAN 818
BLAST of mRNA_Ecto-sp13_S_contig1279.2306.1 vs. uniprot
Match: A0A7J7INX5_9RHOD (RNase NYN domain-containing protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7INX5_9RHOD) HSP 1 Score: 63.9 bits (154), Expect = 7.320e-7 Identity = 43/142 (30.28%), Postives = 68/142 (47.89%), Query Frame = 3
Query: 2454 VIDGNDVALCHRGADGQWSAQGPLLAIQFFERHGVPCVAFLPRERMAGVSPRDGCNTAFQEARAKGAISEIPRGEKADLFILKYAIESKAHVVTNKKLSTHAA--GNDALAFLGQTKQDLREYLSYYHVCYTFVRNDFKPDP 2873
V DG ++A H + +S +G LA+ FF+ G CV FLP R C A A + P G+ D + L YA+ A +VTN +L H +D + +T++ +R++L + +TFV +F P+P
Sbjct: 195 VFDGENIAWAH-ARNAHFSPRGIALAVTFFQERGYRCVVFLPNYRRQ-------C-AALPFADKHDMLVFTPPGDYDDTYALSYALRYDAILVTNDRLQDHLDQFSDDEV----RTRESMRQWLGSHRCSFTFVGEEFVPNP 323
BLAST of mRNA_Ecto-sp13_S_contig1279.2306.1 vs. uniprot
Match: R7Q260_CHOCR (RNase NYN domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q260_CHOCR) HSP 1 Score: 64.3 bits (155), Expect = 1.440e-6 Identity = 45/171 (26.32%), Postives = 78/171 (45.61%), Query Frame = 3
Query: 2451 VVIDGNDVALCHRGADGQWSAQGPLLAIQFFERHGVPCVAFLPRERM-AGVSPRDGCNTAF--------QEARAKGAISEIPRGEKADLFILKYAIESKAHVVTN----KKLSTHAAGNDALAFLGQTKQDLREYLSYYHVCYTFVRNDFKPDPETPFIRMLLSQAPAASR 2924
V+IDG +V + D + ++G LA+ ++ +G+ +A LPR ++ R G E ++G + P G D FIL+YA+ +A V++N K+L D +D+R +L + + YTF+ DF P+P + + Q+ A R
Sbjct: 474 VIIDGQNVGRDYGENDHIFQSRGVKLALDYYAANGIRALALLPRNKVDQRTYLRPGVRNTLVADDPELLNELHSQGRVYFTPAGSHDDFFILRYAMRKEADVISNDRFIKELEMQETAEDV--------RDMRTFLETHLIPYTFIGQDFVPNPNPCRLGRNVHQSRALRR 636
BLAST of mRNA_Ecto-sp13_S_contig1279.2306.1 vs. uniprot
Match: T0QIU5_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0QIU5_SAPDV) HSP 1 Score: 59.7 bits (143), Expect = 4.530e-5 Identity = 47/162 (29.01%), Postives = 77/162 (47.53%), Query Frame = 3
Query: 2451 VVIDGNDVALCHRGADGQWSAQGPLLAIQFFERHGVPCVAFLP-----------RERMAG----VSPRDGCNTA--FQEARAKGAISEIPRGEKADLFILKYAIESKAHVVTNKKLSTHAAGNDALAFLGQTKQDLREYLSYYHVCYTFVRNDFKPDPETPF 2885
+V+D +VA+ H G + ++S G L ++ G +AFLP ++RMAG VSP + Q +G + P + D + ++YA VVTN H D L GQTK +R++LS + + +T+V ++F P+P+ F
Sbjct: 741 IVVDAANVAMRH-GLNARFSCAGIRLVFDYYMARGHKVLAFLPDYLLRYESVGAQKRMAGAGYDVSPSKLPDDVGLLQSMVLEGTVIATPPQDYDDSYCIQYAGRHDGCVVTNDLFRDHV---DGLQGNGQTKAAMRQWLSAHCISFTWVGDEFLPNPDFRF 898
BLAST of mRNA_Ecto-sp13_S_contig1279.2306.1 vs. uniprot
Match: A0A8J4PVQ7_9MYCE (RNase NYN domain-containing protein n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4PVQ7_9MYCE) HSP 1 Score: 59.3 bits (142), Expect = 5.970e-5 Identity = 43/167 (25.75%), Postives = 79/167 (47.31%), Query Frame = 3
Query: 2430 RSTTPKKVVIDGNDVALCHRGADGQWSAQGPLLAIQFFERHGVPCVAFLPRERMAGVSPRDGCNT--------------AFQEARAKGAISEIPRGEKADLFILKYAIESKAHVVTNKKLSTHAAGNDALAFLGQT-KQDLREYLSYYHVCYTFVRNDFKPDPETPF 2885
+ T +VIDG +VA + G ++S G A+ ++++ G VAF+P + + D AFQ+ G +S P + D++ + YA A +VTN + ND + ++ KQ +R+++ + + +TFVR++F P+P+ F
Sbjct: 757 KKTGKSYIVIDGPNVAKKY-GTKKKFSVMGLKKALDYYDQRGYEVVAFVPESYASRKNHHDPKKNFTLFEYQDVADDLVAFQKLTESGKVSLTPAQDYDDIYTIHYARMHNACIVTNDRY------NDIIDKCQESEKQKIRKFIRDHCISFTFVRDEFLPNPDFKF 916 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1279.2306.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1279.2306.1 >prot_Ecto-sp13_S_contig1279.2306.1 ID=prot_Ecto-sp13_S_contig1279.2306.1|Name=mRNA_Ecto-sp13_S_contig1279.2306.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=851bp MDWTPAAVGSSSPSAANYGESTGMVRASPDEMMVSASTGRSVAPPRDLADback to top mRNA from alignment at Ecto-sp13_S_contig1279:7893..14873- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1279.2306.1 ID=mRNA_Ecto-sp13_S_contig1279.2306.1|Name=mRNA_Ecto-sp13_S_contig1279.2306.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=6981bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1279:7893..14873- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1279:7893..14873- >mRNA_Ecto-sp13_S_contig1279.2306.1 ID=mRNA_Ecto-sp13_S_contig1279.2306.1|Name=mRNA_Ecto-sp13_S_contig1279.2306.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=2553bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1279:7893..14873- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |