mRNA_Ecto-sp13_S_contig1263.2179.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1263.2179.1 vs. uniprot
Match: D7FW26_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FW26_ECTSI) HSP 1 Score: 860 bits (2222), Expect = 1.910e-311 Identity = 447/471 (94.90%), Postives = 456/471 (96.82%), Query Frame = 1
Query: 1 MDAILTALTTSVLGTVRLFVVLLAGFLASKFPRNEPLLTKDTCRCISRVCALLFWPALMTAGTGATLTPGTLQDAWQLIVTGSFTIGFSGVVAWLVGRVSFRRPEDRRAFRPAALAIAFPNSAGFPLLLVDALCEQDYINSDFDDDEVECFTQATGMIFIYVVVWQVWFYSWGFYALAQDDELERKLAGEATKSPSEATTDDVEISSPCEIAQGDALPRRQAEGGSGRHSPIHDGAMIVGASRRNEGVSGTGGTAAASHAGKDGDDDGCFSWAGLRRRLLRLVVSPNMIAVAIGVIIAMIPALQELLFDSPRAVLRPLGAAIETIGSPTVAVSTLVMAGSLVQVPTVGAGSAAATQGVQGDDDGTLRRWHRFRILVGFLHVVCRLIVVPAVGFTLFWVARKQSSVMGENRLMHLILLIELAMPSAAFVIVSLNQLRMPATAGFMARLYLWQYGASMLTITAWTALAVHLVY 1413
MDAI+TALTTSVLGTVRLFVVLLAGFLASKFPRNEPLL KDTCRCISRVCALLFWPALMTAGTGATLTPGTLQDAWQL+VTGSFTIGFSGVVAWLVGRVSFRRPEDRRAFRPAALAIAFPNSAGFPLLLVDALCEQDYINSDFDDDEVECFTQATGMIFIYVVVWQVWFYSWGFYAL QDDELERKLAGEA KSPSEATTDDVEISSPCEIAQGDALP RQAEGGSGR SP HDGA++VGASRRNEGVSGT GTAAASHAGKDGDD+GC SWAGLRRRL RLVVSPNMIAVAIGV IAMIPALQE LFD+PRAVLRPLGAA+ETIGSPTVAVSTLVMAGSLVQVPTVGA SAAA+QG QGDDDGTLRRW RFRILVGFLHVVCRLIVVPAVGFTLFWVAR QSSVMGENRLMHLILLIELAMPSAAFVIVSLNQLRMPATAGFMARLYLWQYGASM+TITAWTALAVHLVY
Sbjct: 1 MDAIVTALTTSVLGTVRLFVVLLAGFLASKFPRNEPLLAKDTCRCISRVCALLFWPALMTAGTGATLTPGTLQDAWQLVVTGSFTIGFSGVVAWLVGRVSFRRPEDRRAFRPAALAIAFPNSAGFPLLLVDALCEQDYINSDFDDDEVECFTQATGMIFIYVVVWQVWFYSWGFYALGQDDELERKLAGEAAKSPSEATTDDVEISSPCEIAQGDALPPRQAEGGSGRQSPTHDGAVVVGASRRNEGVSGTSGTAAASHAGKDGDDEGCCSWAGLRRRLWRLVVSPNMIAVAIGVTIAMIPALQEQLFDNPRAVLRPLGAAVETIGSPTVAVSTLVMAGSLVQVPTVGAASAAASQGGQGDDDGTLRRWRRFRILVGFLHVVCRLIVVPAVGFTLFWVARNQSSVMGENRLMHLILLIELAMPSAAFVIVSLNQLRMPATAGFMARLYLWQYGASMVTITAWTALAVHLVY 471
BLAST of mRNA_Ecto-sp13_S_contig1263.2179.1 vs. uniprot
Match: A0A6H5J918_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J918_9PHAE) HSP 1 Score: 696 bits (1795), Expect = 2.620e-243 Identity = 423/680 (62.21%), Postives = 435/680 (63.97%), Query Frame = 1
Query: 1 MDAILTALTTSVLGTVRLFVVLLAGFLASKFPRNEPLLTKDTCRCISRVCALLFWPALMTAGTGATLTPGTLQDAWQLIVTGSFTIGFSGVVAWLVGRVSFRRPEDRRAFRPAALAIAFPNSAGFPLLLVDALCEQDYIN-------SDFDDDEVECFTQATGMIFI------------------------YVVVWQVWFYSWGFYALAQDDELERKLAGEATKSPSEATTDDVEISSPCEIAQGDALPRRQAEGGSGRHSPIHDGAMIVGASRRNEGVSGTGGTAAASHAGKDGDDDGCFSWAGLRRRLLRLVVSPNMIAVAIGVIIAMIPALQELLFDSPRAVLRPLGAAIE----------------TIGSPTVAVSTLVMAGSLVQVPTVGAGSAAATQGVQGDDDGTLRRWHRFRILVGFLHVVCRLIV------------------------------------------------------------------------------------------------------------------------------------------------------------------VPAVGFTLFWVARKQSSVMGENRLMHLILLIELAMPSAAFVIVSLNQLRMPATAGFMARLYLWQYGASMLTITAWTALAVHLVY 1413
MDAILTAL TSVLGTVRL VVLLAGFLASKFP PLLTKDTCRCISRVCALLFWPALMTAGTGATLTPGTLQDAWQL+VTGSFTIGFSGVVAWLVGRVSF+RPEDRRAFRPAALAIAFPNSAGFPLLLVDALCEQDYIN FD+ + + TG+ Y + QVWFYSWGFYAL QDDELERKLAGE K PSEATTDDVEISSPCEIAQGDALP QA+GGSG SPIHDGA+IVGASRRNEGVSGTGGTA ASHAG+DGDD GCFSWAGLRRRL RL VSPNMIAVAIGVIIAM+PALQELLFDSPRAVLRP GAAIE TIGSPTVAVSTLVMAGSLVQVPTVGAGSAAATQGVQ DDDGTLRRW RFRI+VGFLHVVCRLIV VPAVGFTLFWVAR QSSVMGENRLMHLILLIELAMPSAAFVIVSLNQLRMPATAGFMARLYLWQYGASMLTITAWTALAVHLVY
Sbjct: 1 MDAILTALITSVLGTVRLSVVLLAGFLASKFP---PLLTKDTCRCISRVCALLFWPALMTAGTGATLTPGTLQDAWQLVVTGSFTIGFSGVVAWLVGRVSFQRPEDRRAFRPAALAIAFPNSAGFPLLLVDALCEQDYINRWPTQNTKLFDNVLLWRGVETTGLYIATCELAPRPAACSHTLRRQGFSFHGYGQILQVWFYSWGFYALGQDDELERKLAGEEAKIPSEATTDDVEISSPCEIAQGDALPPLQADGGSGMQSPIHDGAVIVGASRRNEGVSGTGGTAVASHAGEDGDDAGCFSWAGLRRRLWRLAVSPNMIAVAIGVIIAMLPALQELLFDSPRAVLRPFGAAIEVGHCSLAATPVAIEQGTIGSPTVAVSTLVMAGSLVQVPTVGAGSAAATQGVQCDDDGTLRRWRRFRIVVGFLHVVCRLIVGEHADPRAARFKDYLHGPMDAGTKLKVKFRTGDIGLRERRRRHRTVDEEDDEFKCDCGFECEDRVHVVAECPLYKKEREVYVTELGKIDGTYREMFEAWNREERTVAVVGHRRWVEKAGRDIVRIDRLGKTFLSHLWQSRKERLAIGDRSCGNNAPSSRGRVVPAVGFTLFWVARNQSSVMGENRLMHLILLIELAMPSAAFVIVSLNQLRMPATAGFMARLYLWQYGASMLTITAWTALAVHLVY 677
BLAST of mRNA_Ecto-sp13_S_contig1263.2179.1 vs. uniprot
Match: A0A6H5JAX8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JAX8_9PHAE) HSP 1 Score: 581 bits (1498), Expect = 1.350e-201 Identity = 311/475 (65.47%), Postives = 367/475 (77.26%), Query Frame = 1
Query: 1 MDAILTALTTSVLGTVRLFVVLLAGFLASKFPRNEPLLTKDTCRCISRVCALLFWPALMTAGTGATLTPGTLQDAWQLIVTGSFTIGFSGVVAWLVGRVSFRRPEDRRAFRPAALAIAFPNSAGFPLLLVDALCEQDYINSDFDDDEVECFTQATGMIFIYVVVWQVWFYSWGFYALAQDDELERKLAGEATKSPSEATTDDVEISSPCEIAQGDALPRRQAEGGSGR----HSPIHDGAMIVGASRRNEGVSGTGGTAAASHAGKDGDDDGCFSWAGLRRRLLRLVVSPNMIAVAIGVIIAMIPALQELLFDSPRAVLRPLGAAIETIGSPTVAVSTLVMAGSLVQVPTVGAGSAAATQGVQGDDDGTLRRWHRFRILVGFLHVVCRLIVVPAVGFTLFWVARKQSSVMGENRLMHLILLIELAMPSAAFVIVSLNQLRMPATAGFMARLYLWQYGASMLTITAWTALAVHLVY 1413
MDAI+TAL+TSVLGT+R+ +LLAGF AS++P++EPLL K+TCR SR CALLF P+LM + GATL P L+++WQL+V GSFT+ SG VAW+VGRV FRRPEDRRAFRPA LAI F NSAGFPLLL++ALCEQDY+ SD++DD +ECFTQATGMIFIYVVVWQ++F+ WGFYAL DD LER L G+ T++ + +T RQ GG GR + + D G +EG + GGT + G WAG + R+ R++VSPN+I+V IGV+IAMI LQE+LFD+ R++LRPLGAA++T+G+P VAVSTLVMAGSL QVPTV +AA+TQG QGDDDGTLRR RFRI+ GFLHVVCRLIVVPA+GFTLFWVAR QSSVMGENRLMHLILLIE AMPSAAFVIVSLNQLRMPATAGFMARLYLWQYGASMLTITAWTALAVHLVY
Sbjct: 1 MDAIITALSTSVLGTLRVLAILLAGFFASRWPKSEPLLAKETCRAFSRACALLFLPSLMISSLGATLNPEALKNSWQLVVAGSFTVALSGTVAWVVGRVFFRRPEDRRAFRPAGLAITFANSAGFPLLLMNALCEQDYVRSDYNDDALECFTQATGMIFIYVVVWQMYFFGWGFYALGHDDTLERSLTGQQTRTRTPSTKXXXXX-----XXTSSTSSARQEHGGVGRINAAEAVVIDIEPCTGEESSSEGTTNAGGTEDGGDVSEGGP------WAGFKERVSRVLVSPNIISVTIGVVIAMIAPLQEMLFDNSRSILRPLGAALQTVGTPEVAVSTLVMAGSLAQVPTV---AAASTQGGQGDDDGTLRRKRRFRIIAGFLHVVCRLIVVPAIGFTLFWVARTQSSVMGENRLMHLILLIEFAMPSAAFVIVSLNQLRMPATAGFMARLYLWQYGASMLTITAWTALAVHLVY 461
BLAST of mRNA_Ecto-sp13_S_contig1263.2179.1 vs. uniprot
Match: A0A6H5J8G0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8G0_9PHAE) HSP 1 Score: 336 bits (861), Expect = 1.370e-103 Identity = 233/612 (38.07%), Postives = 302/612 (49.35%), Query Frame = 1
Query: 4 DAILTALTTSVLGTVRLFVVLLAGFLASKFPRNEPLLTKDTCRCISRVCALLFWPALMTAGTGATLTPGTLQDAWQLIVTGSFTIGFSGVVAWLVGRVSFRRPEDRRAFRPAALAIAFPNSAGFPLLLVDALCEQDYINSDFDDDEVECFTQATGMIFIYVVVWQVWFYSWGFYALAQDDELERKLAGEATKSPSEATTDDVEISSP------------CEIAQGDA----------------------------LPRRQAEGGSGRHSPIHDGAMIVG------------ASRRNEGV------SGTG--GTAAASHA----------------------------------------------------------------------------------GKDGDDDGCFSWAGLRRRLLRLVVSPNMIAVAIGVIIAMIPALQELLFDSPRAVLRPLGAAIETIGSPTVAVSTLVMAGSLVQVPTVGAGSAAATQGVQGDDDGTLRRWHRFRILVGFLHVVCRLIVVPAVGFTLFWVARKQSSVMGENRLMHLILLIELAMPSAAFVIVSLNQLRMPATAGFMARLYLWQYGASMLTITAWTALAVHLVY 1413
D T L TSVLGT R FVVL G++ S P+ EPL+ K+ R SRV LF P LM AG GA L PG L+D+W L+V+ + +IG S VAW G + RR + R FRP LAIAFPN+ PL+L DALCEQD INSDFD D ECF QATGMIFI++ VWQVWFY+WG Y D+ LE L + +P T + ISS C+ G+ +P A+ R S +G + G A+ GV SGTG GT A SH G+ D +G W + R L+VSP ++AV G++I I LQ++LF +P+A+LRPLG AI+ +G PTV VS+LVMAGSLV V V +A G ++ + W R R + GFL V RL+ +PA F +FWVA+ SSVMGENRLMHLILL+E AMP+A +I L+Q+R+P TAGF++RL +WQY AS +T++ WTALA+ ++Y
Sbjct: 18 DTTTTVLLTSVLGTFRFFVVLGVGYIVSVRPQREPLMPKEVGRHFSRVAMDLFLPCLMLAGMGANLNPGALRDSWHLVVSSTLSIGLSNGVAWAFGWLLMRR-DARAKFRPVQLAIAFPNALVVPLVLFDALCEQDLINSDFDGDNNECFDQATGMIFIFLAVWQVWFYAWGVYCFQNDNALELALTSQPAAAPLPTTVRETAISSGGTGPPHAPDPPRCQSGHGNGSITKVSSSTSPPSSVTLRNSSPKHTLHLIPAEAAKVDGDRASEWAEGGAVGGDSGAVDPQAGAAAAGDETGVVGAATESGTGATGTGAKSHGSPVGSLHSREVGVESTPLGRDQPTLMEQTGRGGCGDADASEVASMPRRRKENKAVADLLVIEEGNVIDGGGARGSGTGDVNGGRGSDSEG--PWEEAKHRAWALLVSPVIVAVVAGIVICTIEPLQDMLFHNPQALLRPLGGAIQAVGVPTVTVSSLVMAGSLVAVSAVADEAAPPA----GGNEVAVPIWRRPRFVTGFLLVFLRLVAIPAAFFGIFWVAKTYSSVMGENRLMHLILLVEFAMPTATIMIPLLHQIRLPRTAGFISRLLVWQYAASSITVSFWTALAITMLY 622
BLAST of mRNA_Ecto-sp13_S_contig1263.2179.1 vs. uniprot
Match: D7FW24_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FW24_ECTSI) HSP 1 Score: 164 bits (414), Expect = 6.300e-44 Identity = 88/166 (53.01%), Postives = 119/166 (71.69%), Query Frame = 1
Query: 916 LLFDSPRAVLRPLGAAIETIGSPTVAVSTLVMAGSLVQVPTVGAGSAAATQGVQGDDDGTLRRWHRFRILVGFLHVVCRLIVVPAVGFTLFWVARKQSSVMGENRLMHLILLIELAMPSAAFVIVSLNQLRMPATAGFMARLYLWQYGASMLTITAWTALAVHLVY 1413
+LF +P+A+LRPLG AI+ +G PTV VS+LVMAGSLV V V G+A + G + + W R R ++GFL V RLI +PA F +FW A+ SSVMGENRLMHLILL+E AMP+A +I L+Q+R+P TAGF++RL +WQY AS +T++ WTA A+ ++Y
Sbjct: 1 MLFHNPQALLRPLGGAIQAVGVPTVTVSSLVMAGSLVAVSAVANGAAPSA----GGHEAAVPIWRRPRFVMGFLLVFLRLIAIPAAFFGVFWGAKTYSSVMGENRLMHLILLVEFAMPTATIMIPLLHQIRLPRTAGFISRLLVWQYAASSITVSFWTAFAITMLY 162
BLAST of mRNA_Ecto-sp13_S_contig1263.2179.1 vs. uniprot
Match: A0A835Z6D5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6D5_9STRA) HSP 1 Score: 164 bits (414), Expect = 5.960e-40 Identity = 161/570 (28.25%), Postives = 236/570 (41.40%), Query Frame = 1
Query: 136 ISRVCALLFWPALMTAGTGATLTPGTLQDAWQLIVTGSFTIGFSGVVAWLVGRVSFRRPEDRRAFRPAALAIAFPNSAGFPLLLVDALCEQDYINSDFDDDEVECFTQATGMIFIYVVVWQVWFYSWGFYALAQDDELERK--------------LAGEATKSPSEA---------------------------------------TTDDVEISSPCEIAQG--------DAL--PRRQAEGGSGRHSPIHDGAMIVGASRRNEGVSGTGGTAAASHAGKDGDDDGCFS-------WAGLRRRLLRLVVSPNMIAVAIGVIIAMIPALQELLFDSPRAVLRPLGAAIETIGSPTVAVSTLVMAG-SLVQVPTVGAGSAAAT--QGVQGDDDGT---------LRR--------WHRF-----------------------------------------------------RILVGFLHVVCRLIVVPAVGFTLFWVARKQSSVM-GENRLMHLILLIELAMPSAAFVIVSLNQLRMPATAGFMARLYLWQYGASMLTITAWTALAVHLVY 1413
+ R+C LF P L+ A GA L+ L + L+V + S VV ++ P + R F+ +A+ F N PLL +++LC+QD +N+D+D ECF AT MIF+Y++ W +WFYSWGFY LA+ D+L+ K + G+ + S A T +S C+ G DAL P + GS P D A A A++ A D +G W G + R VVSP +AV +GV I ++PAL+E +F + LRP+GAAI TIG PT+A+ TL+MA S P+ G+ +T + + G +RR W R +L + V+ L+VVPAVGF F + ++ + G L+ L++L++L MP A VIV L+ L +P A +ARLYL+QY AS+ T+TA A+A+ VY
Sbjct: 1 MGRLCNWLFLPGLVCASMGANLSTSLLLEYSPLLVADTVIRAISWVVITACEKLL---PVEPRLFKAVKIAVLFCNVGSIPLLYMESLCDQDIVNADYDGSASECFAAATSMIFVYLITWHIWFYSWGFYELAKADDLDEKPTALPPVDNFLGVSITGDFDRPHSMAVSVVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXFAGGARTFKLSAAASECDSTTGARAAARAPDALLPPLSHSRCGSAASGPAADKAARAPAF-------------ASAAANPDVRANGLAPLPEKQRWWLGGAGGVWRAVVSPPNVAVLLGVTIGVVPALREGMFHDATSPLRPIGAAIVTIGQPTIALQTLLMAARSSSTSPSSDHGTCISTCDRAARSSSSGAAPLSLHSCWVRRESCHQAPYWRRMTFKCTHSHCAPSLPPHSPPPRSLAHSHGRLQLAAAXXXXXXXXXXAQRSLRRSEVLTAAVFVLVPLVVVPAVGFAAFVLLHDNTAFLRGAPPLLQLLILLQLGMPGAQAVIVGLSHLALPRMAAALARLYLYQYVASIATLTALAAVAMMYVY 554
BLAST of mRNA_Ecto-sp13_S_contig1263.2179.1 vs. uniprot
Match: A0A836C7K1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7K1_9STRA) HSP 1 Score: 159 bits (402), Expect = 5.740e-38 Identity = 168/616 (27.27%), Postives = 255/616 (41.40%), Query Frame = 1
Query: 31 SVLGTVRLFVVLLAGFLASKFPRNEPLLTKDTCRCISRVCALLFWPALMTAGTGATLTPGTLQDAWQLIVTGSFTIGFSGVVAWLVGRVSFRRPEDRRAFRPAALAIAFPNSAGFPLLLVDALCEQDYINSDFDDDEVECFTQATGMIFIYVVVWQVWFYSWGFYALAQDDELERK----LAGEAT--------------------KSPSEATTDDVE-ISSPCEIAQGDA-------------LPRRQAEGGSGR------HS------------------------PI--------HDGAMIVGASRR--------NEGVSGTGGT-------AAASHAGKDGDDDGCFSWAGLRRRLLRLVVSPNM-------------------------------IAVAIGVIIAMIPALQELLFDSPRAVLRPLGAAIETIGSPTVAVSTLVMAGSLVQVPTVGAGSAAATQGVQGDDDGTLRRWH----RFRILVGFLHVVCRLIVVPAVGFTLFWVARKQSSVMGE-NRLMHLILLIELAM----------------------------PSAAFVIVSLNQLRMPATAGFMARLYLWQYGASMLTITAWTALAVHLVY 1413
+VL ++ VV G + P+ PL + + R+C L+F PA++ + G LT L + L+ S S VA V R+ P + R ++ AI F N PLL +D+LC+Q IN++FD CF T MIF+Y++ W +WFYSWGF+ LA+ +EL+ +AG++T + S ATTD E + + ++ QG A LPR SGR HS P+ H + ++ + RR N+ +G+ AA H G G + A L L LV P++ IAVA+GVII +IP L LF + R+ LRP+GAA+ T+G P VA++TL+MA SL Q A G + D L R + + V C L+VVP +GF +F + ++ LM L+++ ++ PS VI+SL+Q+ +PA A +AR+Y++QY S++T+T AL + +Y
Sbjct: 11 AVLSMGKIIVVTSIGVFCATRPKGNPLFDAELLPRLGRLCNLVFLPAMVCSSMGGALTAAMLVEYLPLLFADSALRLLSWAVAAAVERLL---PVEPRLYKAVKFAILFTNVGTIPLLYLDSLCDQAVINAEFDGSASLCFESGTNMIFVYLITWHLWFYSWGFFKLAEANELDHPPPPAVAGKSTLQLEEGASLGIKPEDAILEARQESNATTDSSEPVGNTEDVTQGPASLNDVESTGVRRRLPRWLTRQQSGRDRALSEHSQKVAVIIASHGAKQLGCHPAIPVLPVAVLERDEHHHSSPLLASPRRSSDYVSDHNQNSAGSDSVHTPPITPAAHGHHGSHGHVRTPSALARLMPHHLPLVHLPHLSMHVHLHIPDVLPELPKLGAQLKRAASTPPNIAVALGVIIGLIPPLANGLFHNSRSPLRPIGAAMVTVGQPYVAIATLLMASSLAQSRKNAALPTPTVVGTEVMDAAQLHNAQQEQARREKITMLVLVFCPLVVVPMLGFGIFAFLDNYTPILNSATPLMKLLIIFQVTTTSMLRLMVEIXXXXXXXXXXXXXXXXXXPSGLSVIISLSQMHLPAMASSLARMYMYQYLLSIITLTVLAALTMAYIY 623
BLAST of mRNA_Ecto-sp13_S_contig1263.2179.1 vs. uniprot
Match: B8BS46_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BS46_THAPS) HSP 1 Score: 99.0 bits (245), Expect = 3.840e-18 Identity = 118/525 (22.48%), Postives = 219/525 (41.71%), Query Frame = 1
Query: 4 DAILTALTTSVLGTVRLFVVLLAGFLASKFPRNEPLLTKDTCRCISRVCALLFWPALMTAGTGATLTPGTLQDAWQLIVTGSFTIGFSGVVAWLVGRVSFRRPEDRRAFRPAALAIAFPNSAGFPLLLVDALCEQDYINSDF--DDDEVE-----------CFTQATGMIFIYVVVWQVWFYSWGFYALAQDDELERKLAGEATKSPSEATTDDVEIS-SPCEIAQGDALPRRQAEGGSGRHSPIHDGAMIVGASRRNEGVSGTGGTAAASHAGKDGDDDGCFSWAGLRRRLLRLVVSPNMIAVAIGVIIAMIPALQELLFDSPRAVLRPLGAAIETIGSPTVAVSTLVMAGSLVQVPTVGAGSAAATQGVQGDDDGT--------------------------------------------LRRWHRFRILVGFLHVVCRLIVVPAVGFTLFWVARKQSSVMGE-NRLMHLILLIELAMPSAAFVIVSLNQLRMPATAGFMARLYLWQYGASMLTITAWTALAV 1401
+AI + + S T ++FV+ G+ A+ P+L IS++ L L+ A +++TP + W ++V+ I S VA L+G++ F R E++ F +A AFPN P+L+ LCE ++ F + D+V C Q+ MIF+Y W ++ G+ L + +R++ E T S + + + S Q L + + G GR +P ++ NE +G +D + L + + SP +A+ +G I A IP L++ LF+ P LR G+A+E++GS + +V T+++A SLV ++ DD+ T +R+ + + + + RLIV PA+ +L + ++ + L +++++ +P A +++L + +A +A++YL Y S +TI AWT++ +
Sbjct: 3 NAITSVIIASTSATAKVFVIGGIGYWAAA--SKSPILPPHALTPISKMNFNLLILPLIYATLASSVTPEKIGSLWFVLVSAFGVISLSFGVATLLGKLPFFRVENKIDFDALRIAAAFPNIVALPILIFPTLCEFAVVHDSFYTEGDDVNEEATQVEKYRSCVDQSNAMIFVYFFAWNFLYWVLGYETLVRAGS-KRQIHNEETLSTETSVVHNTDDSFEAVNHHQXXXLEQEENGGLEGRVTP-----KVI----ENECTTG-------EEVAIPNEDKKTSVLRLIATALFKTISSPGFVAMILGFITACIPPLRDALFE-PGGALRFFGSAMESLGSASSSVGTIIVAASLVHQANDDNIRDGREDSIEHDDNATQTHQLHNECESSDTIQQTQSTRRRSSMSQFGGMVRRRSSLALQSIRKLRKPTLQMHAWFITSRLIVAPAI-VSLIIIGMDCGGILSDIPSLAKMVVIVNAGLPGAQLCVITLKSKGLTDSASIVAKVYLPSYLLSAVTIAAWTSIGL 506
BLAST of mRNA_Ecto-sp13_S_contig1263.2179.1 vs. uniprot
Match: F0XVW1_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XVW1_AURAN) HSP 1 Score: 97.4 bits (241), Expect = 2.750e-17 Identity = 123/480 (25.62%), Postives = 192/480 (40.00%), Query Frame = 1
Query: 46 VRLFVVLLAGFLASKFPRN-EPLLTKDTCRCISRVCALLFWPALMTAGTGATLTPGTLQDAWQLIVTGSFTIGFSGVVAWLVGRVSFRRPEDRRA---FRPAALAIAFPNSAGFPLLLVDALCEQDYINSDFDDDEVECFTQATGMIFIYVVVWQVWFYSWGFYALAQDDELERKLAGEATKSPSEATTDDVEISSPCEIAQGDALPRRQAEGGSGRHSPIHDGAMIVGASRRNEGVSGTGGTAAASHAGKDGDDDGCFSWAGLRRRLLRLVVSPNMIAVAIGVIIAMIPALQELLFDSPRAVLRPLGAAIETIGSPTVAVSTLVMAGSLVQVPTVGAGS----------------AAATQGVQGDDDGTLRRWHRFR----ILVGFLHVVCRLIVVPAVGFTLFWVARKQSSVMGENRLMHLILLIELAMPSAAFVIVSLNQLRMPATAGFMARLYLWQYGASMLTITAWTALAVHLVY 1413
VRL +V G A+ P+ PLL + + +SR A+ P ++ G++++ L+ + L+V G TIG A L G V P + R +R AALA FPN PL++V +CE+D + DFDD + EC IF+ VW + F+++G LA A K+ RR G + R P G ++ + P A+ +G + M LQ+ LF S + LR LG IE + SP V ++ L+ S V GS AA + V+ R I+ GF+ V RL+ VPA T+ + + + + LIL + MPSA +I+ L++ M A ++ L+++QY AS+LT+T +L++ +VY
Sbjct: 591 VRLLLVASVGAYAATRPKGGPPLLPEAAIQQLSRFSAVCLIPCIIVDSIGSSVSVELLRQSVALVVYGLVTIGLGLGYARLWGAVVL--PAELRETSLWRVAALASGFPNIVAVPLVIVATVCERDEVRDDFDDRD-ECAKTGAAFIFMNSFVWSIVFFTFGVARLA------------AIKA------------------------RRGGAGDAPRPPPPRGGPLV------------------------------------------KFFSEPVNAALVVGTAVGMARPLQKALFVSRTSPLRALGGTIELLASPVVCLAILITGASFANVEFDSIGSDDAAVAGPKEEAKALAAADPELVEAAPPAKKSALDALRGVRPIVAGFILV--RLVFVPA---TVVALETLLPRALPQKPIGRLILHVSSGMPSAQILIILLHKFGMSRAAADISFLFVFQYAASILTMTVLISLSLQVVY 984
BLAST of mRNA_Ecto-sp13_S_contig1263.2179.1 vs. uniprot
Match: A0A0G4H1B2_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4H1B2_VITBC) HSP 1 Score: 88.2 bits (217), Expect = 7.580e-15 Identity = 119/484 (24.59%), Postives = 192/484 (39.67%), Query Frame = 1
Query: 58 VVLLA--GFLASKFPRNEPLLTKDTCRCISRVCALLFWPALMTAGTGATLTPGTLQDAWQLIVTGSF--TIGF--SGVVAWLVGRVSFR---RPEDRRAFRPAA------LAIAFPNSAGFPLLLVDALCEQDYINSDF------------------DDDEVECFTQATGMIFIYVVVWQVWFYSWGFYAL--AQDDELERKLAGEATKSPSEATTDDVEISSPCEIAQGDALPRRQAEGGSGRHSPIHDGAMIVGASRRNEGVSGTGGTAAASHAGKDGDDDGCFSWAGLRRRLLRLVVSPNMIAVAIGVIIAMIPALQELLFDSPRAVLRPLGAAIETIGSPTVAVSTLVMAGSL------VQVPTVG--AGSAAATQGVQGD------DDGTLRRWHRFRILVGFLHVVCRLIVVPAVGFTLFWVARKQ---SSVMGENR-LMHLILLIELAMPSAAFVIVSLNQLRMPATAGFMARLYLW 1350
V+LLA GFL +P EP + + +SR+ +F P L G+ LT + W LI+ IG+ S V+ WL+ V R E+RRA P+ LA+ + NS FPL++++A+CEQ Y + F +D CF A +F+Y V W + F+S G+ L A+D L R E +K+ EA R+ + +P +IA+ +G+++ +PA+Q +F + + +G PTVAV T++MA SL +Q G G + A + G DD +R++ L V+ +L + P +G L A + SSV N+ L+ +++L+E A PSA ++++ +L M AG + +Y W
Sbjct: 20 VLLLAVVGFLCGYYPTEEPFIDTRAAKKLSRIALYVFLPCLCFCSIGSRLTLDDMATLWPLIMWSFLQTVIGWVTSQVLCWLLRDVIDRPSLSKEERRAVGPSLIYSLLPLAVTWQNSGVFPLVMMEAICEQ-YPTAHFSQHTHPHYTTDAGEDVIMEDPVTSCFDDAAMFVFVYGVGWGISFWSVGYSKLKSARDQVLRR----EPSKTRIEAAM-----------------------------------------------------------------------------RVAEDLFNPAIIALLVGILVGCLPAVQSFIFQTNGGFVSSFTKTAHVLGQPTVAVMTMLMAASLAHNVRSMQEAATGDKTGESLANAPLAGSKDIIAADDIGEPEAPNWRMVT--LAVMLKLCIQPLIGILLMCGAERYFGPSSVFLPNKPLVKVVILVEFAAPSAQTLVLAAQRLSMSRLAGNLTYIYTW 419 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1263.2179.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1263.2179.1 >prot_Ecto-sp13_S_contig1263.2179.1 ID=prot_Ecto-sp13_S_contig1263.2179.1|Name=mRNA_Ecto-sp13_S_contig1263.2179.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=472bp MDAILTALTTSVLGTVRLFVVLLAGFLASKFPRNEPLLTKDTCRCISRVCback to top mRNA from alignment at Ecto-sp13_S_contig1263:9615..13635+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1263.2179.1 ID=mRNA_Ecto-sp13_S_contig1263.2179.1|Name=mRNA_Ecto-sp13_S_contig1263.2179.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4021bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1263:9615..13635+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1263:9615..13635+ >mRNA_Ecto-sp13_S_contig1263.2179.1 ID=mRNA_Ecto-sp13_S_contig1263.2179.1|Name=mRNA_Ecto-sp13_S_contig1263.2179.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1416bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1263:9615..13635+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |