mRNA_Ecto-sp13_S_contig1263.2178.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
|
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1263.2178.1 vs. uniprot
Match: A0A6H5JAX8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JAX8_9PHAE) HSP 1 Score: 822 bits (2123), Expect = 2.790e-293 Identity = 435/461 (94.36%), Postives = 442/461 (95.88%), Query Frame = 1
Query: 265 MDAIITALSTSVLGTLRVLAILLAGFFASRWPKSEPLLTKETCRAFSRACALLFLPSLMISSLGATLNPEALVNSWQLVVAGSFTVALSGTVAWVVGRVFFRRPEDRRAFRPAGLAITFANSAGFPLLLMNALCEQDYVRSDYNDDAVECFTQATGMIFIYVVVWQMYFFGWGFYALGHDDTLERSLTGQQTRTQTPSTKTRAAARAASSTSSARQEHGRIGRINAAEVVVIDIEPCAGEESSSEGTTNAGGTGDGGDVSEGDPWAGFKERVSRVLVSPNIISVTIGVIIAMIPPLQEMLFDNSRSMLRPLGAALQTVGTPEVAVSTLVMAGSLAQVPTMAAASTHGGQGDDAGTLRRKRRFRIIAGFLHVVCRLIVVPAIGFTLFWVARNQSSVMGENRLMHLILLIEFAMPSAAFVIVSLNQLRMPATAGFMARLYLWQYGASMLTITAWTALAVNLVY 1647
MDAIITALSTSVLGTLRVLAILLAGFFASRWPKSEPLL KETCRAFSRACALLFLPSLMISSLGATLNPEAL NSWQLVVAGSFTVALSGTVAWVVGRVFFRRPEDRRAFRPAGLAITFANSAGFPLLLMNALCEQDYVRSDYNDDA+ECFTQATGMIFIYVVVWQMYFFGWGFYALGHDDTLERSLTGQQTRT+TPSTK SSTSSARQEHG +GRINAAE VVIDIEPC GEESSSEGTTNAGGT DGGDVSEG PWAGFKERVSRVLVSPNIISVTIGV+IAMI PLQEMLFDNSRS+LRPLGAALQTVGTPEVAVSTLVMAGSLAQVPT+AAAST GGQGDD GTLRRKRRFRIIAGFLHVVCRLIVVPAIGFTLFWVAR QSSVMGENRLMHLILLIEFAMPSAAFVIVSLNQLRMPATAGFMARLYLWQYGASMLTITAWTALAV+LVY
Sbjct: 1 MDAIITALSTSVLGTLRVLAILLAGFFASRWPKSEPLLAKETCRAFSRACALLFLPSLMISSLGATLNPEALKNSWQLVVAGSFTVALSGTVAWVVGRVFFRRPEDRRAFRPAGLAITFANSAGFPLLLMNALCEQDYVRSDYNDDALECFTQATGMIFIYVVVWQMYFFGWGFYALGHDDTLERSLTGQQTRTRTPSTKXXXXXXXTSSTSSARQEHGGVGRINAAEAVVIDIEPCTGEESSSEGTTNAGGTEDGGDVSEGGPWAGFKERVSRVLVSPNIISVTIGVVIAMIAPLQEMLFDNSRSILRPLGAALQTVGTPEVAVSTLVMAGSLAQVPTVAAASTQGGQGDDDGTLRRKRRFRIIAGFLHVVCRLIVVPAIGFTLFWVARTQSSVMGENRLMHLILLIEFAMPSAAFVIVSLNQLRMPATAGFMARLYLWQYGASMLTITAWTALAVHLVY 461
BLAST of mRNA_Ecto-sp13_S_contig1263.2178.1 vs. uniprot
Match: D7FW26_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FW26_ECTSI) HSP 1 Score: 578 bits (1490), Expect = 3.000e-197 Identity = 317/473 (67.02%), Postives = 366/473 (77.38%), Query Frame = 1
Query: 265 MDAIITALSTSVLGTLRVLAILLAGFFASRWPKSEPLLTKETCRAFSRACALLFLPSLMISSLGATLNPEALVNSWQLVVAGSFTVALSGTVAWVVGRVFFRRPEDRRAFRPAGLAITFANSAGFPLLLMNALCEQDYVRSDYNDDAVECFTQATGMIFIYVVVWQMYFFGWGFYALGHDDTLERSLTGQQTRTQTPSTKTRAAARAASSTSSA-------RQEHGRIGRINAAE--VVVIDIEPCAGEESSSEGTTNAGGTGDGGDVSEGDPWAGFKERVSRVLVSPNIISVTIGVIIAMIPPLQEMLFDNSRSMLRPLGAALQTVGTPEVAVSTLVMAGSLAQVPTMAAAS---THGGQGDDAGTLRRKRRFRIIAGFLHVVCRLIVVPAIGFTLFWVARNQSSVMGENRLMHLILLIEFAMPSAAFVIVSLNQLRMPATAGFMARLYLWQYGASMLTITAWTALAVNLVY 1647
MDAI+TAL+TSVLGT+R+ +LLAGF AS++P++EPLL K+TCR SR CALLF P+LM + GATL P L ++WQLVV GSFT+ SG VAW+VGRV FRRPEDRRAFRPA LAI F NSAGFPLLL++ALCEQDY+ SD++DD VECFTQATGMIFIYVVVWQ++F+ WGFYALG DD LER L G+ ++ PS T +S A RQ G GR + VV+ S + GT A G GD WAG + R+ R++VSPN+I+V IGV IAMIP LQE LFDN R++LRPLGAA++T+G+P VAVSTLVMAGSL QVPT+ AAS + GGQGDD GTLRR RRFRI+ GFLHVVCRLIVVPA+GFTLFWVARNQSSVMGENRLMHLILLIE AMPSAAFVIVSLNQLRMPATAGFMARLYLWQYGASM+TITAWTALAV+LVY
Sbjct: 1 MDAIVTALTTSVLGTVRLFVVLLAGFLASKFPRNEPLLAKDTCRCISRVCALLFWPALMTAGTGATLTPGTLQDAWQLVVTGSFTIGFSGVVAWLVGRVSFRRPEDRRAFRPAALAIAFPNSAGFPLLLVDALCEQDYINSDFDDDEVECFTQATGMIFIYVVVWQVWFYSWGFYALGQDDELERKLAGEAAKS--PSEATTDDVEISSPCEIAQGDALPPRQAEGGSGRQSPTHDGAVVVGASRRNEGVSGTSGTAAASHAGKDGDDEGCCSWAGLRRRLWRLVVSPNMIAVAIGVTIAMIPALQEQLFDNPRAVLRPLGAAVETIGSPTVAVSTLVMAGSLVQVPTVGAASAAASQGGQGDDDGTLRRWRRFRILVGFLHVVCRLIVVPAVGFTLFWVARNQSSVMGENRLMHLILLIELAMPSAAFVIVSLNQLRMPATAGFMARLYLWQYGASMVTITAWTALAVHLVY 471
BLAST of mRNA_Ecto-sp13_S_contig1263.2178.1 vs. uniprot
Match: A0A6H5J918_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J918_9PHAE) HSP 1 Score: 417 bits (1071), Expect = 1.470e-131 Identity = 294/687 (42.79%), Postives = 350/687 (50.95%), Query Frame = 1
Query: 265 MDAIITALSTSVLGTLRVLAILLAGFFASRWPKSEPLLTKETCRAFSRACALLFLPSLMISSLGATLNPEALVNSWQLVVAGSFTVALSGTVAWVVGRVFFRRPEDRRAFRPAGLAITFANSAGFPLLLMNALCEQDYVRSDYNDDAVECF--------TQATGMIFI------------------------YVVVWQMYFFGWGFYALGHDDTLERSLTGQQTRTQTPSTKTRAAARAASSTSSAR-------QEHGRIGRINAAEVVVIDIEPCAGEESSSEGTTNAGGT------GDGGDVSEGDPWAGFKERVSRVLVSPNIISVTIGVIIAMIPPLQEMLFDNSRSMLRPLGAALQ----------------TVGTPEVAVSTLVMAGSLAQVPTM---AAASTHGGQGDDAGTLRRKRRFRIIAGFLHVVCRLIV------------------------------------------------------------------------------------------------------------------------------------------------------------------VPAIGFTLFWVARNQSSVMGENRLMHLILLIEFAMPSAAFVIVSLNQLRMPATAGFMARLYLWQYGASMLTITAWTALAVNLVY 1647
MDAI+TAL TSVLGT+R+ +LLAGF AS++P PLLTK+TCR SR CALLF P+LM + GATL P L ++WQLVV GSFT+ SG VAW+VGRV F+RPEDRRAFRPA LAI F NSAGFPLLL++ALCEQDY+ + + F + TG+ Y + Q++F+ WGFYALG DD LER L G++ + PS T +S A+ Q G G + + D G +EG + GGT G+ GD + WAG + R+ R+ VSPN+I+V IGVIIAM+P LQE+LFD+ R++LRP GAA++ T+G+P VAVSTLVMAGSL QVPT+ +AA+T G Q DD GTLRR RRFRI+ GFLHVVCRLIV VPA+GFTLFWVARNQSSVMGENRLMHLILLIE AMPSAAFVIVSLNQLRMPATAGFMARLYLWQYGASMLTITAWTALAV+LVY
Sbjct: 1 MDAILTALITSVLGTVRLSVVLLAGFLASKFP---PLLTKDTCRCISRVCALLFWPALMTAGTGATLTPGTLQDAWQLVVTGSFTIGFSGVVAWLVGRVSFQRPEDRRAFRPAALAIAFPNSAGFPLLLVDALCEQDYINR-WPTQNTKLFDNVLLWRGVETTGLYIATCELAPRPAACSHTLRRQGFSFHGYGQILQVWFYSWGFYALGQDDELERKLAGEEAKI--PSEATTDDVEISSPCEIAQGDALPPLQADGGSGM----QSPIHDGAVIVGASRRNEGVSGTGGTAVASHAGEDGDDAGCFSWAGLRRRLWRLAVSPNMIAVAIGVIIAMLPALQELLFDSPRAVLRPFGAAIEVGHCSLAATPVAIEQGTIGSPTVAVSTLVMAGSLVQVPTVGAGSAAATQGVQCDDDGTLRRWRRFRIVVGFLHVVCRLIVGEHADPRAARFKDYLHGPMDAGTKLKVKFRTGDIGLRERRRRHRTVDEEDDEFKCDCGFECEDRVHVVAECPLYKKEREVYVTELGKIDGTYREMFEAWNREERTVAVVGHRRWVEKAGRDIVRIDRLGKTFLSHLWQSRKERLAIGDRSCGNNAPSSRGRVVPAVGFTLFWVARNQSSVMGENRLMHLILLIELAMPSAAFVIVSLNQLRMPATAGFMARLYLWQYGASMLTITAWTALAVHLVY 677
BLAST of mRNA_Ecto-sp13_S_contig1263.2178.1 vs. uniprot
Match: A0A6H5J8G0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8G0_9PHAE) HSP 1 Score: 315 bits (806), Expect = 2.720e-93 Identity = 222/609 (36.45%), Postives = 300/609 (49.26%), Query Frame = 1
Query: 268 DAIITALSTSVLGTLRVLAILLAGFFASRWPKSEPLLTKETCRAFSRACALLFLPSLMISSLGATLNPEALVNSWQLVVAGSFTVALSGTVAWVVGRVFFRRPEDRRAFRPAGLAITFANSAGFPLLLMNALCEQDYVRSDYNDDAVECFTQATGMIFIYVVVWQMYFFGWGFYALGHDDTLERSLTGQQTRTQTPSTKTRAA--------------------------ARAASSTS---------------------------------------------------------------------------SARQEHGR-IGRINAAEVVVIDIEPCAGEESSSEGTTNAGGTGDG----------------------------------------GDVSEG------DPWAGFKERVSRVLVSPNIISVTIGVIIAMIPPLQEMLFDNSRSMLRPLGAALQTVGTPEVAVSTLVMAGSLAQVPTMA-AASTHGGQGDDAGTLRRKRRFRIIAGFLHVVCRLIVVPAIGFTLFWVARNQSSVMGENRLMHLILLIEFAMPSAAFVIVSLNQLRMPATAGFMARLYLWQYGASMLTITAWTALAVNLVY 1647
D T L TSVLGT R +L G+ S P+ EPL+ KE R FSR LFLP LM++ +GA LNP AL +SW LVV+ + ++ LS VAW G + RR + R FRP LAI F N+ PL+L +ALCEQD + SD++ D ECF QATGMIFI++ VWQ++F+ WG Y +D+ LE +LT Q P+T A + +SSTS + + HG +G +++ EV V + P ++ + T GG GD GDV+ G PW K R +LVSP I++V G++I I PLQ+MLF N +++LRPLG A+Q VG P V VS+LVMAGSL V +A A+ G + A + R+ RF + GFL V RL+ +PA F +FWVA+ SSVMGENRLMHLILL+EFAMP+A +I L+Q+R+P TAGF++RL +WQY AS +T++ WTALA+ ++Y
Sbjct: 18 DTTTTVLLTSVLGTFRFFVVLGVGYIVSVRPQREPLMPKEVGRHFSRVAMDLFLPCLMLAGMGANLNPGALRDSWHLVVSSTLSIGLSNGVAWAFGWLLMRR-DARAKFRPVQLAIAFPNALVVPLVLFDALCEQDLINSDFDGDNNECFDQATGMIFIFLAVWQVWFYAWGVYCFQNDNALELALTSQPAAAPLPTTVRETAISSGGTGPPHAPDPPRCQSGHGNGSITKVSSSTSPPSSVTLRNSSPKHTLHLIPAEAAKVDGDRASEWAEGGAVGGDSGAVDPQAGAAAAGDETGVVGAATESGTGATGTGAKSHGSPVGSLHSREVGV-ESTPLGRDQPTLMEQTGRGGCGDADASEVASMPRRRKENKAVADLLVIEEGNVIDGGGARGSGTGDVNGGRGSDSEGPWEEAKHRAWALLVSPVIVAVVAGIVICTIEPLQDMLFHNPQALLRPLGGAIQAVGVPTVTVSSLVMAGSLVAVSAVADEAAPPAGGNEVAVPIWRRPRF--VTGFLLVFLRLVAIPAAFFGIFWVAKTYSSVMGENRLMHLILLVEFAMPTATIMIPLLHQIRLPRTAGFISRLLVWQYAASSITVSFWTALAITMLY 622
BLAST of mRNA_Ecto-sp13_S_contig1263.2178.1 vs. uniprot
Match: D7FW24_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FW24_ECTSI) HSP 1 Score: 160 bits (405), Expect = 5.830e-42 Identity = 87/163 (53.37%), Postives = 115/163 (70.55%), Query Frame = 1
Query: 1159 MLFDNSRSMLRPLGAALQTVGTPEVAVSTLVMAGSLAQVPTMAAASTHGGQGDDAGTLRRKRRFRIIAGFLHVVCRLIVVPAIGFTLFWVARNQSSVMGENRLMHLILLIEFAMPSAAFVIVSLNQLRMPATAGFMARLYLWQYGASMLTITAWTALAVNLVY 1647
MLF N +++LRPLG A+Q VG P V VS+LVMAGSL V +A + G +A + RR R + GFL V RLI +PA F +FW A+ SSVMGENRLMHLILL+EFAMP+A +I L+Q+R+P TAGF++RL +WQY AS +T++ WTA A+ ++Y
Sbjct: 1 MLFHNPQALLRPLGGAIQAVGVPTVTVSSLVMAGSLVAVSAVANGAAPSAGGHEAA-VPIWRRPRFVMGFLLVFLRLIAIPAAFFGVFWGAKTYSSVMGENRLMHLILLVEFAMPTATIMIPLLHQIRLPRTAGFISRLLVWQYAASSITVSFWTAFAITMLY 162
BLAST of mRNA_Ecto-sp13_S_contig1263.2178.1 vs. uniprot
Match: A0A835Z6D5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6D5_9STRA) HSP 1 Score: 157 bits (397), Expect = 5.680e-37 Identity = 151/557 (27.11%), Postives = 228/557 (40.93%), Query Frame = 1
Query: 406 RACALLFLPSLMISSLGATLNPEALVNSWQLVVAGSFTVALSGTVAWVVGRVFFRRPEDRRAFRPAGLAITFANSAGFPLLLMNALCEQDYVRSDYNDDAVECFTQATGMIFIYVVVWQMYFFGWGFYALGHDDTLER--------------SLTGQQTRTQTPST----------------------------------------KTRAAARAASSTSSARQ------------EHGRIGRINAAEVVVIDIEPCAGEESSSEGTTNAGGTGDGGDVSEGDPWAGFKERVSRVLVSPNIISVTIGVIIAMIPPLQEMLFDNSRSMLRPLGAALQTVGTPEVAVSTLVMAGSLAQV------------------------------------------------------------------PTMAAASTHG----------GQGDDAGTLRRKRRFRIIAGFLHVVCRLIVVPAIGFTLFWVARNQSSVM-GENRLMHLILLIEFAMPSAAFVIVSLNQLRMPATAGFMARLYLWQYGASMLTITAWTALAVNLVY 1647
R C LFLP L+ +S+GA L+ L+ L+VA + A+S V ++ P + R F+ +A+ F N PLL M +LC+QD V +DY+ A ECF AT MIF+Y++ W ++F+ WGFY L D L+ S+TG R + + K AAA ST+ AR H R G +AA D A +S+ + G + W G V R +VSP ++V +GV I ++P L+E +F ++ S LRP+GAA+ T+G P +A+ TL+MA + P + A +HG R RR ++ + V+ L+VVPA+GF F + + ++ + G L+ L++L++ MP A VIV L+ L +P A +ARLYL+QY AS+ T+TA A+A+ VY
Sbjct: 3 RLCNWLFLPGLVCASMGANLSTSLLLEYSPLLVADTVIRAISWVVITACEKLL---PVEPRLFKAVKIAVLFCNVGSIPLLYMESLCDQDIVNADYDGSASECFAAATSMIFVYLITWHIWFYSWGFYELAKADDLDEKPTALPPVDNFLGVSITGDFDRPHSMAVSVVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXFAGGARTFKLSAAASECDSTTGARAAARAPDALLPPLSHSRCG--SAASGPAADKAARAPAFASAAANPDVRANGLAPLPEKQRWWLGGAGGVWRAVVSPPNVAVLLGVTIGVVPALREGMFHDATSPLRPIGAAIVTIGQPTIALQTLLMAARSSSTSPSSDHGTCISTCDRAARSSSSGAAPLSLHSCWVRRESCHQAPYWRRMTFKCTHSHCAPSLPPHSPPPRSLAHSHGRLQLAAAXXXXXXXXXXAQRSLRRSEVLTAAVFVLVPLVVVPAVGFAAFVLLHDNTAFLRGAPPLLQLLILLQLGMPGAQAVIVGLSHLALPRMAAALARLYLYQYVASIATLTALAAVAMMYVY 554
BLAST of mRNA_Ecto-sp13_S_contig1263.2178.1 vs. uniprot
Match: A0A8J2SPR5_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SPR5_9STRA) HSP 1 Score: 107 bits (266), Expect = 4.770e-21 Identity = 123/475 (25.89%), Postives = 203/475 (42.74%), Query Frame = 1
Query: 265 MDAIITALSTSVLGTLRVLAILLAGFFASRWPKSEPLLTKETCRAFSRACALLFLPSLMISSLGATLNPEALVNSWQLVVAGSFTVALSGTVAWVVGRVFFRRPEDRRA-FRPAGLAITFANSAGFPLLLMNALCEQDYVRSDYNDDAVECFTQATGMIFIYVVVWQMYFFGWGFYALGHDDTLERSLTGQQTRTQTPSTKTRAAARAASSTSSARQEHGRIGRINAAEVVVIDIEPCAGEESSSEGTTNAGGTGDGGDVSEGDPWAGFKERVSRVLVSPNIISVTIGVIIAMIPPLQEMLFD-NSRSMLRPLGAALQTVGTPEVAVSTLVMAGSLAQVPTMAAASTHGGQGDDA------------GTLRRKRRFRIIAGFLHVVCRLIVVPAIGFTLFWVARNQSSVMGENRLMHLILLIEFAMPSAAFVIVSLNQLRMPATAGFMARLYLWQYGASMLTITAWTALAVNLVY 1647
+D + L+ V+ L ++A + G A++ P+ P+L+K+ SR A + +PSL+IS+ GA+++ + L + +VV T+ + + G +F P+ R + ++ A LA F N PL+ + ++CE+ VR+DY DD C + ++F+ W FF +G + R+ I AAE G P E V + P ++ +G I +I PL+ LF RS LR +G ++ + +P V V+ L++ SLA V A A+ D G + R II+GF VV RL+VVPAI L +A + + RL +LLI MP+A +IV L++ + A ++ L+++QY AS+ T+TA + +N VY
Sbjct: 5 IDGEVLLLAFGVVAKLVIVAAV--GATAAKRPRDRPILSKDAITRISRLSAAVMIPSLIISTTGASISVKLLKETVLVVVFSLVTIGVGLLSMQLWGMLFIPAPQRRSSLWQVASLAAAFPNIVAIPLVAVVSICERRDVRADY-DDIATCARTGSAIVFVGSFAWTAIFFTYGAH--------------------------------------------RLRTIEAAE--------------------------------SGSPAPKPAEAVGSCVREPINAALAVGTAIGLIAPLRRGLFSVGGRSPLRIIGGTVELLASPTVCVAVLLVGASLANVDLNALAAPDKSARDAEAPPPPPAKRSVWGAVYAVRG--IISGF--VVVRLLVVPAIVGALEALATATIPI-PQARLGRAVLLISSGMPTAQIMIVLLHKFGLSQQASELSFLFVFQYAASIPTMTALISSVLNRVY 395
BLAST of mRNA_Ecto-sp13_S_contig1263.2178.1 vs. uniprot
Match: A0A836C7K1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7K1_9STRA) HSP 1 Score: 108 bits (271), Expect = 7.160e-21 Identity = 83/234 (35.47%), Postives = 122/234 (52.14%), Query Frame = 1
Query: 1075 RVSRVLVSPNIISVTIGVIIAMIPPLQEMLFDNSRSMLRPLGAALQTVGTPEVAVSTLVMAGSLAQ------VPT--------MAAASTHGGQGDDAGTLRRKRRFRIIAGFLHVVCRLIVVPAIGFTLFWVARNQSSVMGE-NRLMHLILLIEFAM----------------------------PSAAFVIVSLNQLRMPATAGFMARLYLWQYGASMLTITAWTALAVNLVY 1647
++ R +P I+V +GVII +IPPL LF NSRS LRP+GAA+ TVG P VA++TL+MA SLAQ +PT M AA H Q + A RR++ I + V C L+VVP +GF +F N + ++ LM L+++ + PS VI+SL+Q+ +PA A +AR+Y++QY S++T+T AL + +Y
Sbjct: 397 QLKRAASTPPNIAVALGVIIGLIPPLANGLFHNSRSPLRPIGAAMVTVGQPYVAIATLLMASSLAQSRKNAALPTPTVVGTEVMDAAQLHNAQQEQA---RREK----ITMLVLVFCPLVVVPMLGFGIFAFLDNYTPILNSATPLMKLLIIFQVTTTSMLRLMVEIXXXXXXXXXXXXXXXXXXPSGLSVIISLSQMHLPAMASSLARMYMYQYLLSIITLTVLAALTMAYIY 623
BLAST of mRNA_Ecto-sp13_S_contig1263.2178.1 vs. uniprot
Match: A0A0G4H1B2_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4H1B2_VITBC) HSP 1 Score: 103 bits (256), Expect = 1.590e-19 Identity = 121/484 (25.00%), Postives = 189/484 (39.05%), Query Frame = 1
Query: 292 TSVLGTLRVLAILLAGFFASRWPKSEPLLTKETCRAFSRACALLFLPSLMISSLGATLNPEALVNSWQLVVAGSFTVALSGTVAWVVGRVF-------FRRP----EDRRAFRPA------GLAITFANSAGFPLLLMNALCEQ-------DYVRSDYNDDAVE----------CFTQATGMIFIYVVVWQMYFFGWGFYALGHDDTLERSLTGQQTRTQTPSTKTRAAARAASSTSSARQEHGRIGRINAAEVVVIDIEPCAGEESSSEGTTNAGGTGDGGDVSEGDPWAGFKERVSRVLVSPNIISVTIGVIIAMIPPLQEMLFDNSRSMLRPLGAALQTVGTPEVAVSTLVMAGSLAQ-VPTMAAASTHGGQGDDAGTLRRKRRFRIIAG--------------FLHVVCRLIVVPAIGFTLFWVARNQ---SSVMGENR-LMHLILLIEFAMPSAAFVIVSLNQLRMPATAGFMARLYLW 1584
+S L+VL + + GF +P EP + + SR +FLP L S+G+ L + + W L++ SF L + WV +V RP E+RRA P+ LA+T+ NS FPL++M A+CEQ + Y DA E CF A +F+Y V W G F+++G+ +S Q R + T+ AA RV+ L +P II++ +G+++ +P +Q +F + + +G P VAV T++MA SLA V +M A+T G+ IIA L V+ +L + P IG L A SSV N+ L+ +++L+EFA PSA ++++ +L M AG + +Y W
Sbjct: 12 SSCKANLQVLLLAVVGFLCGYYPTEEPFIDTRAAKKLSRIALYVFLPCLCFCSIGSRLTLDDMATLWPLIM-WSF---LQTVIGWVTSQVLCWLLRDVIDRPSLSKEERRAVGPSLIYSLLPLAVTWQNSGVFPLVMMEAICEQYPTAHFSQHTHPHYTTDAGEDVIMEDPVTSCFDDAAMFVFVYGVGW-----GISFWSVGYSKL--KSARDQVLRREPSKTRIEAAM-----------------------------------------------------------------RVAEDLFNPAIIALLVGILVGCLPAVQSFIFQTNGGFVSSFTKTAHVLGQPTVAVMTMLMAASLAHNVRSMQEAATGDKTGESLANAPLAGSKDIIAADDIGEPEAPNWRMVTLAVMLKLCIQPLIGILLMCGAERYFGPSSVFLPNKPLVKVVILVEFAAPSAQTLVLAAQRLSMSRLAGNLTYIYTW 419
BLAST of mRNA_Ecto-sp13_S_contig1263.2178.1 vs. uniprot
Match: F0XVW1_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XVW1_AURAN) HSP 1 Score: 98.2 bits (243), Expect = 3.160e-17 Identity = 128/498 (25.70%), Postives = 198/498 (39.76%), Query Frame = 1
Query: 262 PMDAIITALSTSVLGTLRVLAILLAGFFASRWPKS-EPLLTKETCRAFSRACALLFLPSLMISSLGATLNPEALVNSWQLVVAGSFTVALSGTVAWVVGRVFFRRPEDRRA---FRPAGLAITFANSAGFPLLLMNALCEQDYVRSDYNDDAVECFTQATGMIFIYVVVWQMYFFGWGFYALGHDDTLERSLTGQQTRTQTPSTKTRAAARAASSTSSARQEHGRIGRINAAEVVVIDIEPCAGEESSSEGTTNAGGTGDGG--DVSEGDPWAGF-KERVSRVLVSPNIISVTIGVIIAMIPPLQEMLFDNSRSMLRPLGAALQTVGTPEVAVSTLVMAGSLAQVPTMAAASTHGGQGDDAGTLRRKRRFR-----------------------------IIAGFLHVVCRLIVVPAIGFTLFWVARNQSSVMGENRLMHLILLIEFAMPSAAFVIVSLNQLRMPATAGFMARLYLWQYGASMLTITAWTALAVNLVY 1647
P D + +L V R+L + G +A+ PK PLL + + SR A+ +P +++ S+G++++ E L S LVV G T+ L A + G V P + R +R A LA F N PL+++ +CE+D VR D+ DD EC IF+ VW + FF +G R+ I A GG GD G P F E V+ LV +G + M PLQ+ LF + S LR LG ++ + +P V ++ L+ S A V + S DDA K + I+AGF+ V RL+ VPA T+ + + + + LIL + MPSA +I+ L++ M A ++ L+++QY AS+LT+T +L++ +VY
Sbjct: 579 PGDIFLISLGVMV----RLLLVASVGAYAATRPKGGPPLLPEAAIQQLSRFSAVCLIPCIIVDSIGSSVSVELLRQSVALVVYGLVTIGLGLGYARLWGAVVL--PAELRETSLWRVAALASGFPNIVAVPLVIVATVCERDEVRDDF-DDRDECAKTGAAFIFMNSFVWSIVFFTFGV--------------------------------------------ARLAAIKA----------------------RRGGAGDAPRPPPPRGGPLVKFFSEPVNAALV--------VGTAVGMARPLQKALFVSRTSPLRALGGTIELLASPVVCLAILITGASFANVEFDSIGS------DDAAVAGPKEEAKALAAADPELVEAAPPAKKSALDALRGVRPIVAGFILV--RLVFVPA---TVVALETLLPRALPQKPIGRLILHVSSGMPSAQILIILLHKFGMSRAAADISFLFVFQYAASILTMTVLISLSLQVVY 984 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1263.2178.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1263.2178.1 >prot_Ecto-sp13_S_contig1263.2178.1 ID=prot_Ecto-sp13_S_contig1263.2178.1|Name=mRNA_Ecto-sp13_S_contig1263.2178.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=462bp MDAIITALSTSVLGTLRVLAILLAGFFASRWPKSEPLLTKETCRAFSRACback to top mRNA from alignment at Ecto-sp13_S_contig1263:4375..9419- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1263.2178.1 ID=mRNA_Ecto-sp13_S_contig1263.2178.1|Name=mRNA_Ecto-sp13_S_contig1263.2178.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5045bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1263:4375..9419- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1263:4375..9419- >mRNA_Ecto-sp13_S_contig1263.2178.1 ID=mRNA_Ecto-sp13_S_contig1263.2178.1|Name=mRNA_Ecto-sp13_S_contig1263.2178.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1386bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1263:4375..9419- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |