mRNA_Ecto-sp13_S_contig12610.2159.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig12610.2159.1
Unique NamemRNA_Ecto-sp13_S_contig12610.2159.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig12610.2159.1 vs. uniprot
Match: A0A6H5JYP1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYP1_9PHAE)

HSP 1 Score: 924 bits (2387), Expect = 0.000e+0
Identity = 603/783 (77.01%), Postives = 617/783 (78.80%), Query Frame = 2 
Query:   77 MAVAATMPPSMPSSKKRCWNLLVKDVRNNAEEAEVLSSFRKRYTSTRKLAFRPVADYAGGSXXXXXXXXXPTDKTTTTITQGGKACIEIQFTGPQPIEGPAGLLCNLLQATFVSAHPVQLDRGRKRKTRPGGGGGSRSSLASSTRPLAETIEQGCSRSVALKTAAADTASATAGDSPAXXXXXXXXXXXXXXXXXXXXXMKSGASAAKHEYLSAYVSDTTSYASSRTSSSSDLLXXXXXXXXXXXXXXXXXXXXXXXXXXXDATWADVGELPSTSSTFSPNQEQQHAVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLSAPVPATTADFPASSTSPPPCLGRSCSVMTTEGNDLPRWDDVIRGVESPPSSGGSIDEADASGDRLPAAAPLPPPPPLGVRPASGDTDDPAPPSASCPGLARGTSYDECRAGVMSQEEAVSLFAATGAATAEDKPXXXXXXXXAGDGHWEGALDDDPDAAFCPLALERQCSSTWALLDPTNAGAATAAVTVAGEEGAPDHQRASIVPDPCLAAESSGEQQQPTMWYGEGPHHSAVPAGGGIELPPAGDSIAFGWCEQ------------------------------ECDFDGNYAARSSKGPRGLPPTAATSFFPDPSXXXXXXXXXXXXXXXXXPSSNSLNNRCRFAFLGLESELRDFTVCARFSVDPAAKVERFASLPLDGAAGXXXXXXPAGTGGGRRGRVDAAVEFPSIMEIWPEVYKVDNIRVMEVDMVVEVRSSEGNILYTGPTLKV 2335
            MAVAA  PPSMPSSKKRCWNLLVKDVRN+A+E EVLSSFRKRYTSTRKLAFRPVADYAGGS XXXXXXXX        IT GG+ACIEIQFTGPQPIEGPAGLLC+LL+ATFVSAHPVQLDRGRKRKTRPG               LAET E+GCSRSVALKT AADTASATAGD   XXXXXXXXXXXXXXXXXXXXX        KHE LS YVSDTTSYASSRT        XXXXXXXXXXXXXXXXXXXXXXXXXXDATWADVGELPSTSS FSPNQEQQHA +                       XXXXXXXXXXX    SLSAPVPATTADFPASSTSPPPCLGRSCSVMT EGNDLPRWDDVIRGVESPPSSGGSIDEADASGDRLPAAA    PPPLG RPASGDTDDPAP SASCPGLARGTSYDECRAGVMSQEEAVSLFAA GAATAE   XXXXXXX AG G WEGA DD+PDA FCP+ALER CSSTWALLDPTNAGAA AAVTVAGEEGA DHQRASIVPDPCLAAES        MWYGEGPHHSAVPAGGG+E+PP GDSIAFGWCEQ                              ECDFDGN AA  SK PRGLPPTAATSFFPDPS                 PSSN LNNRCR AFLGLESELRD TVCARFSVDPA++VERFASLPLDGAAGXXXXX PAG  GGRRGR DAAVEFPSIMEIWPEVYKVDNIRVMEVDMVVEVRSSEGNILYTGPTLK+
Sbjct:    1 MAVAAIPPPSMPSSKKRCWNLLVKDVRNHAQEDEVLSSFRKRYTSTRKLAFRPVADYAGGSTXXXXXXXXXXXXXXXXITHGGRACIEIQFTGPQPIEGPAGLLCSLLEATFVSAHPVQLDRGRKRKTRPGXXXXXXXXXXXXXXXLAETSEEGCSRSVALKTTAADTASATAGDXXXXXXXXXXXXXXXXXXXXXXXXXXXX----KHEDLSDYVSDTTSYASSRT--------XXXXXXXXXXXXXXXXXXXXXXXXXXDATWADVGELPSTSSPFSPNQEQQHADDMVVIDDDICTAFGVAFGGQGGLIXXXXXXXXXXX----SLSAPVPATTADFPASSTSPPPCLGRSCSVMTAEGNDLPRWDDVIRGVESPPSSGGSIDEADASGDRLPAAAA---PPPLGARPASGDTDDPAPASASCPGLARGTSYDECRAGVMSQEEAVSLFAAAGAATAEXXXXXXXXXXSAGHGQWEGAPDDNPDAPFCPVALERHCSSTWALLDPTNAGAAAAAVTVAGEEGATDHQRASIVPDPCLAAESXXXXXXAIMWYGEGPHHSAVPAGGGLEMPPPGDSIAFGWCEQTEAAVNEGTKFLSYHRVTHAHAPPCSLTIQECDFDGNCAATPSKPPRGLPPTAATSFFPDPSAAVAACTSR--------PSSNYLNNRCRLAFLGLESELRDVTVCARFSVDPASRVERFASLPLDGAAGXXXXXDPAGVVGGRRGRADAAVEFPSIMEIWPEVYKVDNIRVMEVDMVVEVRSSEGNILYTGPTLKL 756
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BLAST of mRNA_Ecto-sp13_S_contig12610.2159.1 vs. uniprot
Match: D8LCK7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCK7_ECTSI)

HSP 1 Score: 748 bits (1930), Expect = 8.490e-262
Identity = 507/770 (65.84%), Postives = 519/770 (67.40%), Query Frame = 2 
Query:   77 MAVAATMPPSMPSSKKRCWNLLVKDVRNNAEEAEVLSSFRKRYTSTRKLAFRPVADYAGGSXXXXXXXXXPTDKTTTT------------ITQGGKACIEIQFTGPQPIEGPAGLLCNLLQATFVSAHPVQLDRGRKRKTRPGGGGGSRSSLASSTRPLAETIEQGCSRSVALKTAAADTASATAGDSPAXXXXXXXXXXXXXXXXXXXXXMKSGASAAKHEYLSAYVSDTTSYASSRTSSSSDLLXXXXXXXXXXXXXXXXXXXXXXXXXXXDATWADVGELPSTSSTFSPNQEQQHAVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLSAPVPATTADFPASSTSPPPCLGRSCSVMTTEGNDLPRWDDVIRGVESPPSSGGSIDEADASGDRLPAAAPLPPPPPLGVRPASGDTDDPAPPSASCPGLARGTSYDECRAGVMSQEEAVSLFAATGAATAEDKPXXXXXXXXAGDGHWEGALDDDPDAAFCPLALERQCSSTWALLDPTNAGAATAAVTVAGEEGAPDHQRASIVPDPCLAAESS-GEQQQPTMWYGEGPHHSAVPAGGGIELPPAGDSIAFGWCEQECDFDGNYAARSSKGPRGLPPTAATSFFPDPSXXXXXXXXXXXXXXXXXPS--SNSLNNRCRFAFLGLESELRDFTVCARFSVDPAAKVERFASLPLDGAAGXXXXXX--PAGTGGGRRGRVDAAVEFPSIMEIWPEVYKVDNIRVMEVDMVVEVRSSEGNILYTGPTLKV 2335
            MAVAA MPPSMPSSKKRCWNLLVKDVRNNA+EAEVLSSFRKRYTSTRKLAFRPVADYAGGS  XXXXXXX                    ITQGG+ACIEIQFTGPQPIEGPAGL+CNLLQATFVSAHPVQLDRGRKRKTRPG                                                                                                                                                              XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLSAPVPATTADFPASS SPPPCLGRSCSVMT EGNDLP                 SIDEADASGDRLPAA         G RPASGDTDDPAP SASCPGLARGTSYDECRAG MSQEEAVSLFAATGAATAE KP        AGD  WE A  DDPD  FCPLALER CSSTWALLDPT+AGA  AAVTVAGEEGAPDH+RASIVPDPCLAAESS  EQQQPTMWYGEGPHH AVPAGGG+ELPPAGD+IAFGWCEQECDFDGNYAAR SK  R LPPTAATSFFPDPS     XXXXXXXXXXXX    SNSLNNRCRFAFLGLESE+RDFTVCARFSVDPA++VERFASLPLDGAAGXXXXXX  PAG  GGRRGRVDAAVEFPSIMEIWPEVYKVDNIRVMEVDMVVEVRSS+GNILYTGPTLK+
Sbjct:    1 MAVAAIMPPSMPSSKKRCWNLLVKDVRNNAQEAEVLSSFRKRYTSTRKLAFRPVADYAGGSTSXXXXXXXXXXXXXXXXXXXXXXXXXXXITQGGRACIEIQFTGPQPIEGPAGLMCNLLQATFVSAHPVQLDRGRKRKTRPG--------------------------------------------------------------------------------------------------------------------------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLSAPVPATTADFPASSASPPPCLGRSCSVMTAEGNDLP-----------------SIDEADASGDRLPAAXXXXXXXXFGARPASGDTDDPAPSSASCPGLARGTSYDECRAGFMSQEEAVSLFAATGAATAEAKPPASTAAAAAGDDQWERAPGDDPDGPFCPLALERHCSSTWALLDPTHAGAPAAAVTVAGEEGAPDHRRASIVPDPCLAAESSLEEQQQPTMWYGEGPHHPAVPAGGGLELPPAGDTIAFGWCEQECDFDGNYAARPSKTARVLPPTAATSFFPDPSAVAVAXXXXXXXXXXXXXXXXSNSLNNRCRFAFLGLESEIRDFTVCARFSVDPASRVERFASLPLDGAAGXXXXXXXDPAGAVGGRRGRVDAAVEFPSIMEIWPEVYKVDNIRVMEVDMVVEVRSSDGNILYTGPTLKI 619
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BLAST of mRNA_Ecto-sp13_S_contig12610.2159.1 vs. uniprot
Match: A0A6H5K0L1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0L1_9PHAE)

HSP 1 Score: 108 bits (269), Expect = 1.220e-20
Identity = 61/143 (42.66%), Postives = 87/143 (60.84%), Query Frame = 2 
Query:   77 MAVAATMPPSMPSSKKRCWNLLVKDVRNNAEE-AEVLSSFRKRYTSTRKLAFRP-------VADYAGGSXXXXXXXXXPTDKTT--------TTITQGGKACIEIQFTGPQPIEGPAGLLCNLLQATFVSAHPVQLDRGRKRK 457
            M+  A+M PS+P +K+RCW+L++    +NAE+  + L+SFRKRYTS RK+ F+P       VA     +            +TT        TT T+  K CI+++F+GPQPI+GPA L+C+LL  + VSA PV L RGR+RK
Sbjct:    1 MSDLASMTPSLPLAKRRCWDLIITGASSNAEDDIKALASFRKRYTSARKIEFKPTPTATNAVAVNTAATTTFNNTTDTGVAETTNRGDDDGFTTNTKRRKVCIQVEFSGPQPIKGPAELMCSLLSGSSVSALPVFLARGRRRK 143
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BLAST of mRNA_Ecto-sp13_S_contig12610.2159.1 vs. uniprot
Match: D7FZQ5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZQ5_ECTSI)

HSP 1 Score: 105 bits (261), Expect = 5.920e-20
Identity = 60/143 (41.96%), Postives = 86/143 (60.14%), Query Frame = 2 
Query:   77 MAVAATMPPSMPSSKKRCWNLLVKDVRNNAEE-AEVLSSFRKRYTSTRKLAFRP-------VADYAGGSXXXXXXXXXPTDKTT--------TTITQGGKACIEIQFTGPQPIEGPAGLLCNLLQATFVSAHPVQLDRGRKRK 457
            M+  A+M PS+P +K+RCW+L++     NA+E  +VL+SFRKRYTS RK+ F+P       VA     +            +T         TT T+  + CI+++F+GPQPI+GPA L+C+LL  + VSA PV L RGR+RK
Sbjct:   44 MSDLASMTPSLPLAKRRCWDLIITGACTNADEDVKVLASFRKRYTSARKVEFKPTPATTNAVAVNTTATTTLNHTTDTGVAETANRGHDDRFTTNTKRRRVCIQVEFSGPQPIKGPAELMCSLLSGSSVSALPVFLTRGRRRK 186
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BLAST of mRNA_Ecto-sp13_S_contig12610.2159.1 vs. uniprot
Match: D7FZ47_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ47_ECTSI)

HSP 1 Score: 90.9 bits (224), Expect = 1.490e-17
Identity = 49/117 (41.88%), Postives = 63/117 (53.85%), Query Frame = 2 
Query:  119 KKRCWNLLVKDVRNNAEEAEVLSSFRKRYTSTRKLAFRPVADYAGGSXXXXXXXXXPTDKTTTTITQGG--KACIEIQFTGPQPIEGPAGLLCNLLQATFVSAHPVQLDRGRKRKTR 463
            K+RCW   V  V +NA E E+L+S R+RYT+ ++L  RP A                T K       G      +E+QFTGPQP EGP  LLC+LL    V A PV+L RGRK++ R
Sbjct:   41 KQRCWLFQVDGVTSNASEVELLASIRERYTTVKRLVVRPAA----------------TSKDAVAAADGSPRNVVVEVQFTGPQPSEGPGALLCDLLCGVSVDAKPVELPRGRKKRAR 141
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BLAST of mRNA_Ecto-sp13_S_contig12610.2159.1 vs. uniprot
Match: D7FZ48_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FZ48_ECTSI)

HSP 1 Score: 81.6 bits (200), Expect = 2.470e-12
Identity = 60/170 (35.29%), Postives = 74/170 (43.53%), Query Frame = 2 
Query: 1835 ECDFDGNYAARSSKGPRGLPPTAATSFFPDPSXXXXXXXXXXXXXXXXXPSSNSLNNRCRFAFLGLES---ELRDFTVCARFSVDPAAKVERFASLPLDGAAGXXXXXXPAGTGGGRRGRVDAAVEFPSIMEIWPEVYKVDNIRVMEVDMVVEVRSSEGNILYTGPTLKV 2335
            ECDF+G          R  PPT   S  P                    P  +S + +C   F GL +   +LR   V A F VD   KV +  S P+                 G  GR  A V +PS+ EIWPE+Y   NIRV+EVD+VVE+RS  G   Y GP LKV
Sbjct:  383 ECDFEG----------RPTPPTDPKSGEP--------------------PIPSSTDRQCHLVFTGLNNTGQDLRSLRVTAHFGVDSVHKVGKVTS-PIQL---------------GSNGRAYAGVFYPSMQEIWPELYSTSNIRVVEVDLVVEIRSDSGEYQYVGPQLKV 506
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BLAST of mRNA_Ecto-sp13_S_contig12610.2159.1 vs. uniprot
Match: D8LCL1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCL1_ECTSI)

HSP 1 Score: 65.1 bits (157), Expect = 1.810e-7
Identity = 45/107 (42.06%), Postives = 56/107 (52.34%), Query Frame = 2 
Query: 2021 FLGLESELRDF-TVCAR--FSVDPAAKVERFASLPLDGAAGXXXXXXPAGTGGGRRGRVDAAVEFPSIMEIWPEVYKVDNIRVMEVDMVVEVRSSEGNILYTGPTLK 2332
            F+GL    R   T+ AR  FS +P  K ER    PL                 G  GRV  AV++PS+ E+WPEVY    IRV++VDM+VEVRS  G+ LY    LK
Sbjct:  243 FIGLGETGRPLPTLAARAQFSANPGRKAERMVG-PLQA---------------GSNGRVYGAVQYPSMAELWPEVYNSTAIRVVKVDMLVEVRSRYGDSLYLATELK 333
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BLAST of mRNA_Ecto-sp13_S_contig12610.2159.1 vs. uniprot
Match: A0A6H5JZ42_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZ42_9PHAE)

HSP 1 Score: 64.3 bits (155), Expect = 4.710e-7
Identity = 38/89 (42.70%), Postives = 49/89 (55.06%), Query Frame = 2 
Query: 2063 ARFSVDPAAKVERFASLPLDGAAGXXXXXXPAGTGGGRRGRVDAAVEFPSIMEIWPEVYKVDNIRVMEVDMVVEVRSSEGNILYTGPTL 2329
            A+FS +P  + ER    PL   AG               GRV  AV++PS+ E+WPEVY    IRV++VDM+VEVRS  G+ LY    L
Sbjct:  342 AQFSANPGRQAERMVG-PLQARAGS-------------NGRVYGAVQYPSMAELWPEVYNSKAIRVVKVDMLVEVRSRSGDSLYLATEL 416
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BLAST of mRNA_Ecto-sp13_S_contig12610.2159.1 vs. uniprot
Match: D7G8W7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8W7_ECTSI)

HSP 1 Score: 54.3 bits (129), Expect = 7.210e-5
Identity = 25/55 (45.45%), Postives = 36/55 (65.45%), Query Frame = 2 
Query: 2171 GRRGRVDAAVEFPSIMEIWPEVYKVDNIRVMEVDMVVEVRSSEGNILYTGPTLKV 2335
            G  GRV   V+ PS+ ++WPEVY    +RV++VD+ VE+RS  G+ L+    LKV
Sbjct:   88 GPNGRVYGGVQCPSMKDLWPEVYSAAAVRVVQVDLRVEIRSRSGDFLHLDSELKV 142
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12610.2159.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
A0A6H5JYP1_9PHAE0.000e+077.01Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LCK7_ECTSI8.490e-26265.84Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K0L1_9PHAE1.220e-2042.66Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FZQ5_ECTSI5.920e-2041.96Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FZ47_ECTSI1.490e-1741.88Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FZ48_ECTSI2.470e-1235.29Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D8LCL1_ECTSI1.810e-742.06Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JZ42_9PHAE4.710e-742.70Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G8W7_ECTSI7.210e-545.45Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12610contigEcto-sp13_S_contig12610:440..4055 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Model size2335
Hectar predicted targeting categoryother localisation
Exons5
Ec32 ortholog descriptionhypothetical protein
Ec32 orthologEc-03_002530.1
Cds size2259
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12610.2159.1prot_Ecto-sp13_S_contig12610.2159.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig12610 440..3979 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462673.047154-CDS-Ecto-sp13_S_contig12610:439..5081681462673.047154-CDS-Ecto-sp13_S_contig12610:439..508Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12610 440..508 -
1681462673.055463-CDS-Ecto-sp13_S_contig12610:798..12301681462673.055463-CDS-Ecto-sp13_S_contig12610:798..1230Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12610 799..1230 -
1681462673.0632489-CDS-Ecto-sp13_S_contig12610:1522..28201681462673.0632489-CDS-Ecto-sp13_S_contig12610:1522..2820Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12610 1523..2820 -
1681462673.0708075-CDS-Ecto-sp13_S_contig12610:3108..34801681462673.0708075-CDS-Ecto-sp13_S_contig12610:3108..3480Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12610 3109..3480 -
1681462673.0795617-CDS-Ecto-sp13_S_contig12610:3891..39791681462673.0795617-CDS-Ecto-sp13_S_contig12610:3891..3979Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12610 3892..3979 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462673.0893688-UTR-Ecto-sp13_S_contig12610:3979..40551681462673.0893688-UTR-Ecto-sp13_S_contig12610:3979..4055Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig12610 3980..4055 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig12610.2159.1

>prot_Ecto-sp13_S_contig12610.2159.1 ID=prot_Ecto-sp13_S_contig12610.2159.1|Name=mRNA_Ecto-sp13_S_contig12610.2159.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=753bp
MAVAATMPPSMPSSKKRCWNLLVKDVRNNAEEAEVLSSFRKRYTSTRKLA
FRPVADYAGGSTTTSTPPPLPTDKTTTTITQGGKACIEIQFTGPQPIEGP
AGLLCNLLQATFVSAHPVQLDRGRKRKTRPGGGGGSRSSLASSTRPLAET
IEQGCSRSVALKTAAADTASATAGDSPASSSSSSISSSSSRSGGAAGAAM
KSGASAAKHEYLSAYVSDTTSYASSRTSSSSDLLDLLDHDDGIGSSSSSS
SSSSSSSSSSSDATWADVGELPSTSSTFSPNQEQQHAVEDDDMVVSDDDI
CTAFGGAFGGEGGLILGGGGGGGDGGGSLSAPVPATTADFPASSTSPPPC
LGRSCSVMTTEGNDLPRWDDVIRGVESPPSSGGSIDEADASGDRLPAAAP
LPPPPPLGVRPASGDTDDPAPPSASCPGLARGTSYDECRAGVMSQEEAVS
LFAATGAATAEDKPPASAAAAAAGDGHWEGALDDDPDAAFCPLALERQCS
STWALLDPTNAGAATAAVTVAGEEGAPDHQRASIVPDPCLAAESSGEQQQ
PTMWYGEGPHHSAVPAGGGIELPPAGDSIAFGWCEQECDFDGNYAARSSK
GPRGLPPTAATSFFPDPSAAAAAAAAAVAAACTSSPSSNSLNNRCRFAFL
GLESELRDFTVCARFSVDPAAKVERFASLPLDGAAGGGGGGDPAGTGGGR
RGRVDAAVEFPSIMEIWPEVYKVDNIRVMEVDMVVEVRSSEGNILYTGPT
LKV
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mRNA from alignment at Ecto-sp13_S_contig12610:440..4055-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig12610.2159.1 ID=mRNA_Ecto-sp13_S_contig12610.2159.1|Name=mRNA_Ecto-sp13_S_contig12610.2159.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3616bp|location=Sequence derived from alignment at Ecto-sp13_S_contig12610:440..4055- (Ectocarpus species13 EcNAP12_S_4_19m)
AGCTGTTGACCGGACGCACACACACCACCTGCAGAGGCCATAAAATTTTG
CGACAATAGCGGTCAGGGGGGAAACCATGGCCGTCGCAGCCACCATGCCT
CCCTCCATGCCGTCCTCCAAGAAGAGATGTTGGAATCTGCTCGTGAAGGA
CGTCAGGAACAACGGTGAGCAGGATGACCCCACACTGGTGTGTGCGGCAC
ACGGAACGGGATGTATGCCTTCAGGCCGGGATCGCACTCGAAACATGCAA
GGCCACACAGCCCACCGCGCGGCGTAAAGATGAAATGAAGCAGCGGAAAA
ACAGGAACGGCCAGTTCTCCCAGGCTGGGAAAAAACGCCCATTCATCTAG
CGAAACCCCCGCTACACCTTGGAAGTCGAAGTAGTTTCTGCGTATCACAC
ACCGGCAACAAGATTTTTTCCGAAACTCATGAACGGCATTTCGAGGCAGC
GAGCACTAGAGAGCATCAGCAGTTTCAGACATGGACCAGCCTCGGTGTTT
GCAGTCGCTCAGCCGTTTCTGTCTCCTCACCTCGTTCTGTACCCCGGACC
CTCCCCAAAAAAAACGGTGCATCAGCCGAGGAGGCCGAGGTGCTCTCCTC
CTTCCGGAAGAGGTACACCTCAACCCGAAAGCTGGCCTTCCGGCCTGTCG
CCGACTACGCCGGTGGCTCGACAACAACCTCCACCCCTCCTCCTCTCCCC
ACCGACAAAACCACCACCACCATCACACAGGGCGGCAAAGCCTGCATCGA
GATCCAGTTCACCGGCCCCCAGCCCATCGAGGGCCCCGCAGGCCTGTTGT
GCAACCTTCTCCAGGCGACGTTCGTCTCGGCGCACCCCGTTCAGCTCGAC
CGGGGCCGCAAGAGGAAGACCCGGCCCGGCGGCGGCGGCGGTTCCCGCTC
CTCTTTGGCCTCCTCCACACGGCCCTTGGCGGAAACAATCGAACAGGGTG
AGTTTTAAGGGTTGCGGCATGTGTTGCGCCCTGGTTTGGAAATCGGAGCG
CGTGGTCGGCCATGCGCGTTTCGCCAGGGACAAAGCCCATGGATGCTGTG
CTCAGACGTCGGTGTGCGCTCTCTCGTGTCTCTCTTTGTTTAATTGTGCC
GCGGATGCTGCAGGCTTGGATTTTTCGGTCTTTTTTCCATTTTGTTGTCC
GCTCTTCCTCCGCCATTTTCACCCTCATCTCCTCACCGGTGCCCGTCATT
CTCCTTGCTTTGCCGCGATTCTTCGTTCCATGTAGGGTGTTCACGAAGCG
TCGCGTTGAAGACGGCCGCTGCCGACACCGCTAGCGCAACGGCCGGCGAC
AGCCCGGCCAGCAGCAGCAGCAGCAGCATCAGCAGCAGCAGCAGCAGAAG
CGGTGGCGCAGCAGGGGCAGCAATGAAGAGTGGGGCATCAGCAGCAAAGC
ACGAGTACCTCAGCGCCTATGTCAGCGACACCACCAGCTACGCCAGCAGC
AGGACCAGCAGCTCCAGCGACCTCCTCGACCTCCTCGACCACGACGACGG
CATCGGCAGCAGCTCCAGCAGCAGCAGCAGCTCCAGCAGCAGCAGCAGCA
GCAGCAGCGACGCCACGTGGGCGGACGTCGGCGAATTACCCTCCACGTCG
TCAACGTTCTCCCCGAACCAGGAGCAGCAGCACGCCGTCGAAGACGATGA
CATGGTCGTCAGCGACGACGATATCTGCACGGCGTTCGGCGGAGCGTTCG
GGGGCGAGGGGGGCCTGATTCTCGGAGGAGGCGGCGGCGGCGGCGACGGC
GGCGGCAGCCTCTCAGCCCCGGTCCCCGCCACCACCGCCGACTTCCCGGC
GTCATCGACGTCGCCGCCGCCGTGCCTGGGCCGTTCCTGCAGCGTGATGA
CTACCGAGGGCAACGACCTCCCCAGGTGGGACGATGTTATCCGCGGCGTG
GAGTCGCCGCCGTCGTCGGGCGGGAGCATCGACGAGGCGGACGCGAGCGG
TGACCGGCTGCCTGCGGCGGCGCCGCTGCCGCCGCCGCCGCCCCTCGGGG
TAAGACCTGCCTCTGGTGACACCGACGACCCCGCGCCTCCCTCCGCCTCT
TGCCCGGGCCTGGCCCGCGGCACCAGCTACGACGAGTGCAGAGCGGGCGT
GATGTCTCAAGAAGAAGCGGTCTCGCTCTTCGCCGCCACCGGTGCAGCGA
CGGCAGAAGACAAACCACCGGCCTCCGCCGCCGCTGCTGCCGCCGGAGAC
GGCCATTGGGAGGGGGCGCTCGACGACGACCCGGACGCGGCGTTCTGCCC
GCTCGCTCTGGAGCGCCAGTGCTCCTCGACTTGGGCACTGCTTGACCCAA
CCAACGCCGGCGCTGCTACGGCGGCGGTGACGGTGGCCGGGGAGGAAGGG
GCTCCCGACCACCAGCGTGCCAGTATAGTCCCCGACCCGTGCCTGGCGGC
GGAGTCGTCCGGGGAGCAGCAGCAGCCGACCATGTGGTACGGCGAGGGAC
CTCACCACTCTGCCGTCCCCGCTGGTGGCGGGATCGAGCTGCCGCCAGCC
GGGGACTCGATAGCGTTTGGTTGGTGCGAGCAGGTGAAAAGATGACCGCG
GCGTTGTGGGGACCCTTCCTTTTTTTGGTAGTGTTTTAGCTTCCCAGTTC
CTCAGGCCCGCGCGTCAAACAACTTATAAACGCGAAAAAAACGATGAAAG
AAACACGACCGGCCTCTATTCAGACCCAGTTCTTCCTTTTGTCACACGCA
GATAGACGCATATGTTGAGACTTGTCCTCGTGCAGACGGAGGCAGCGGCA
AACGAAGAGACGAATTTTATATGCTATCATCGAGTCACGCACGCTCATGC
CCCCGCTTACACGTTGACGATTCAGGAGTGTGACTTCGATGGGAACTACG
CCGCGCGGTCTTCCAAGGGCCCCCGGGGGCTGCCGCCTACCGCGGCGACA
TCTTTCTTCCCAGATCCATCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGT
AGCGGCGGCCTGTACGTCCTCACCCTCGTCAAACTCCCTCAACAACCGGT
GTCGATTCGCCTTCTTGGGCCTCGAGAGCGAGCTCCGCGATTTCACCGTC
TGCGCGCGGTTCTCCGTCGACCCGGCGGCAAAGGTGGAACGGTTCGCGAG
CTTGCCGTTGGATGGGGCAGCCGGTGGCGGTGGCGGCGGCGACCCTGCCG
GAACCGGTGGTGGAAGACGGGGTAGAGTGGACGCGGCGGTAGAGTTCCCC
AGCATCATGGAGATCTGGCCGGAGGTGTACAAAGTTGACAATATTCGCGT
CATGGAGGTATGTGTGTGTATGGCTTCGTGTCGACCGCGCTAACTGGCAG
ACCAGTGAAAAGGTTTCTCACGGTTGTGTGTGTGTGAGAGTGTTTTTTTT
TCTTCTTAATAGCATCGACCGCGCCAACCGGCTCATCAACGAAAATACCT
CAGTCTCAGTTCGGTGGTGTGTGCGGGTGTGGGTATGTTTATTTTCAGGT
GGCATCGACCGGCTGACCAGTGAGAATGACGTCAGTATTGTATACAACAG
CCAACCACAGAGTAAACACCACCCGTCACTGCCCCCCATTGTTGCAGGTG
GACATGGTCGTAGAAGTTCGATCGTCAGAGGGGAATATCTTGTACACCGG
GCCAACGCTCAAGGTA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig12610:440..4055-

>mRNA_Ecto-sp13_S_contig12610.2159.1 ID=mRNA_Ecto-sp13_S_contig12610.2159.1|Name=mRNA_Ecto-sp13_S_contig12610.2159.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=2259bp|location=Sequence derived from alignment at Ecto-sp13_S_contig12610:440..4055- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGCCGTCGCAGCCACCATGCCTCCCTCCATGCCGTCCTCCAAGAAGAG
ATGTTGGAATCTGCTCGTGAAGGACGTCAGGAACAACGCCGAGGAGGCCG
AGGTGCTCTCCTCCTTCCGGAAGAGGTACACCTCAACCCGAAAGCTGGCC
TTCCGGCCTGTCGCCGACTACGCCGGTGGCTCGACAACAACCTCCACCCC
TCCTCCTCTCCCCACCGACAAAACCACCACCACCATCACACAGGGCGGCA
AAGCCTGCATCGAGATCCAGTTCACCGGCCCCCAGCCCATCGAGGGCCCC
GCAGGCCTGTTGTGCAACCTTCTCCAGGCGACGTTCGTCTCGGCGCACCC
CGTTCAGCTCGACCGGGGCCGCAAGAGGAAGACCCGGCCCGGCGGCGGCG
GCGGTTCCCGCTCCTCTTTGGCCTCCTCCACACGGCCCTTGGCGGAAACA
ATCGAACAGGGGTGTTCACGAAGCGTCGCGTTGAAGACGGCCGCTGCCGA
CACCGCTAGCGCAACGGCCGGCGACAGCCCGGCCAGCAGCAGCAGCAGCA
GCATCAGCAGCAGCAGCAGCAGAAGCGGTGGCGCAGCAGGGGCAGCAATG
AAGAGTGGGGCATCAGCAGCAAAGCACGAGTACCTCAGCGCCTATGTCAG
CGACACCACCAGCTACGCCAGCAGCAGGACCAGCAGCTCCAGCGACCTCC
TCGACCTCCTCGACCACGACGACGGCATCGGCAGCAGCTCCAGCAGCAGC
AGCAGCTCCAGCAGCAGCAGCAGCAGCAGCAGCGACGCCACGTGGGCGGA
CGTCGGCGAATTACCCTCCACGTCGTCAACGTTCTCCCCGAACCAGGAGC
AGCAGCACGCCGTCGAAGACGATGACATGGTCGTCAGCGACGACGATATC
TGCACGGCGTTCGGCGGAGCGTTCGGGGGCGAGGGGGGCCTGATTCTCGG
AGGAGGCGGCGGCGGCGGCGACGGCGGCGGCAGCCTCTCAGCCCCGGTCC
CCGCCACCACCGCCGACTTCCCGGCGTCATCGACGTCGCCGCCGCCGTGC
CTGGGCCGTTCCTGCAGCGTGATGACTACCGAGGGCAACGACCTCCCCAG
GTGGGACGATGTTATCCGCGGCGTGGAGTCGCCGCCGTCGTCGGGCGGGA
GCATCGACGAGGCGGACGCGAGCGGTGACCGGCTGCCTGCGGCGGCGCCG
CTGCCGCCGCCGCCGCCCCTCGGGGTAAGACCTGCCTCTGGTGACACCGA
CGACCCCGCGCCTCCCTCCGCCTCTTGCCCGGGCCTGGCCCGCGGCACCA
GCTACGACGAGTGCAGAGCGGGCGTGATGTCTCAAGAAGAAGCGGTCTCG
CTCTTCGCCGCCACCGGTGCAGCGACGGCAGAAGACAAACCACCGGCCTC
CGCCGCCGCTGCTGCCGCCGGAGACGGCCATTGGGAGGGGGCGCTCGACG
ACGACCCGGACGCGGCGTTCTGCCCGCTCGCTCTGGAGCGCCAGTGCTCC
TCGACTTGGGCACTGCTTGACCCAACCAACGCCGGCGCTGCTACGGCGGC
GGTGACGGTGGCCGGGGAGGAAGGGGCTCCCGACCACCAGCGTGCCAGTA
TAGTCCCCGACCCGTGCCTGGCGGCGGAGTCGTCCGGGGAGCAGCAGCAG
CCGACCATGTGGTACGGCGAGGGACCTCACCACTCTGCCGTCCCCGCTGG
TGGCGGGATCGAGCTGCCGCCAGCCGGGGACTCGATAGCGTTTGGTTGGT
GCGAGCAGGAGTGTGACTTCGATGGGAACTACGCCGCGCGGTCTTCCAAG
GGCCCCCGGGGGCTGCCGCCTACCGCGGCGACATCTTTCTTCCCAGATCC
ATCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGTAGCGGCGGCCTGTACGT
CCTCACCCTCGTCAAACTCCCTCAACAACCGGTGTCGATTCGCCTTCTTG
GGCCTCGAGAGCGAGCTCCGCGATTTCACCGTCTGCGCGCGGTTCTCCGT
CGACCCGGCGGCAAAGGTGGAACGGTTCGCGAGCTTGCCGTTGGATGGGG
CAGCCGGTGGCGGTGGCGGCGGCGACCCTGCCGGAACCGGTGGTGGAAGA
CGGGGTAGAGTGGACGCGGCGGTAGAGTTCCCCAGCATCATGGAGATCTG
GCCGGAGGTGTACAAAGTTGACAATATTCGCGTCATGGAGGTGGACATGG
TCGTAGAAGTTCGATCGTCAGAGGGGAATATCTTGTACACCGGGCCAACG
CTCAAGGTA
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