mRNA_Ecto-sp13_S_contig12564.2122.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig12564.2122.1 vs. uniprot
Match: D7FPC0_ECTSI (Glycosyl transferase, group 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPC0_ECTSI) HSP 1 Score: 551 bits (1420), Expect = 4.360e-177 Identity = 302/402 (75.12%), Postives = 312/402 (77.61%), Query Frame = 1
Query: 1 LVVDGVVFQVDAAKPQGVSRVWVSVLPAV----SRTEGTCLTLLLRGLAPPPRVIEEAFFALPSERFTTKHLPLYNPSFGYVADGLMLSWAVRNAQATAFVSTLYTQPLWATTPNVVGLLLVHDVLPETFGWDMSKGKWSQKANAVAKASSVVAVSQHTAKEFLRVYPPHITTPLASGNAIGSQSLRSVWVAHNGVNTAVYRP------------------------SNAFRRLARLGPGTPYVMIVGSRHGYKNARAAYRALGLAATPTVDAASSGSASPVGTLALVLVGGG-------------------------------RRGGEE---------------SEPGIVDDNLLAQGYAGAKALLHLSLAEGFGLTVLEAFACGCPVIAADIPPIREIAG 984
LVVDGVVFQVDAAKPQGV+RVW SVLPA+ S EGTC TLLLRGLAPPPRVIEEAFF LPSERFTTKHLPLYNPSFGYVADGL+LSWAVR A ATAFVSTLYTQPLWATTPNVVGLLLVHDVLPETFGWDMSKG+WSQKANAVA+ASSVVAVSQHTAKEFLRVYPP ITTP ASGNA GS SLRSVWVAHNGV+TAVYRP S+AFRRLARLGPGTPYVMIVGSRHGYKNARAAYRALGLAATPTVDAA+SGSA+P GTLALVLVGGG R G SEPG+VDDNLLAQGYAGAKALLHLSLAEGFGLTVLEAFACGCPVIAADIPPIREIAG
Sbjct: 1822 LVVDGVVFQVDAAKPQGVNRVWASVLPAILGRLSEFEGTCFTLLLRGLAPPPRVIEEAFFGLPSERFTTKHLPLYNPSFGYVADGLVLSWAVRKAGATAFVSTLYTQPLWATTPNVVGLLLVHDVLPETFGWDMSKGEWSQKANAVAEASSVVAVSQHTAKEFLRVYPPDITTPSASGNATGSHSLRSVWVAHNGVDTAVYRPLTFNDHNHVPDTAGDQSNTSNTNESDAFRRLARLGPGTPYVMIVGSRHGYKNARAAYRALGLAATPTVDAANSGSAAPGGTLALVLVGGGPIQPDELEVLAEVGSWSHVGVGSGMTSADTRHRAGXXXXXXXXXXXXXXXXXSEPGVVDDNLLAQGYAGAKALLHLSLAEGFGLTVLEAFACGCPVIAADIPPIREIAG 2223
BLAST of mRNA_Ecto-sp13_S_contig12564.2122.1 vs. uniprot
Match: A0A6H5KHK0_9PHAE (Glycos_transf_1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHK0_9PHAE) HSP 1 Score: 546 bits (1406), Expect = 1.500e-174 Identity = 300/402 (74.63%), Postives = 309/402 (76.87%), Query Frame = 1
Query: 1 LVVDGVVFQVDAAKPQGVSRVWVSVLPAV----SRTEGTCLTLLLRGLAPPPRVIEEAFFALPSERFTTKHLPLYNPSFGYVADGLMLSWAVRNAQATAFVSTLYTQPLWATTPNVVGLLLVHDVLPETFGWDMSKGKWSQKANAVAKASSVVAVSQHTAKEFLRVYPPHITTPLASGNAIGSQSLRSVWVAHNGVNTAVYRP------------------------SNAFRRLARLGPGTPYVMIVGSRHGYKNARAAYRALGLAATPTVDAASSGSASPVGTLALVLVGGG--------------------------------RRG--------------GEESEPGIVDDNLLAQGYAGAKALLHLSLAEGFGLTVLEAFACGCPVIAADIPPIREIAG 984
LVVDGVVFQVD KPQG+SRVW SVLPA+ S EGTCLTLLLRGLAPPPRVIEEAF LPSERFTTKHLPLY P FGYVA+GLMLSWAVRNA ATAFVSTLY+QPLWATTPNVVGLLLVHDVLPETFGWDMSKG+WSQKANAVA+ASSVVAVSQHTAKEFLRVYPP ITTP ASGNA GS SLRSVWVAHNGV+TAVYRP SNAFRRLA LGPGTPYVMIVGSR GYKNARAAYRALGLAATPTVDAASSGSA+P GTLALVLVGGG R G GEESEPG+VDDNLLAQGYAGAKALLHLSL EGFGLTVLEAFACGCPVIAADIPPIREIAG
Sbjct: 2084 LVVDGVVFQVDVTKPQGISRVWASVLPAILGRLSEFEGTCLTLLLRGLAPPPRVIEEAFLGLPSERFTTKHLPLYKPFFGYVAEGLMLSWAVRNAGATAFVSTLYSQPLWATTPNVVGLLLVHDVLPETFGWDMSKGEWSQKANAVAEASSVVAVSQHTAKEFLRVYPPEITTPSASGNATGSHSLRSVWVAHNGVDTAVYRPLTFNGDNHVPDDDGDQNSTSNTNESNAFRRLAGLGPGTPYVMIVGSRLGYKNARAAYRALGLAATPTVDAASSGSAAPGGTLALVLVGGGPIQPDELELLAEVGAWSHVGVGSGMTPADTKHRAGAGXXXXXXXXXXXXGEESEPGVVDDNLLAQGYAGAKALLHLSLGEGFGLTVLEAFACGCPVIAADIPPIREIAG 2485
BLAST of mRNA_Ecto-sp13_S_contig12564.2122.1 vs. uniprot
Match: F0Y104_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y104_AURAN) HSP 1 Score: 153 bits (386), Expect = 1.220e-37 Identity = 116/329 (35.26%), Postives = 160/329 (48.63%), Query Frame = 1
Query: 7 VDGVVFQVDAAKPQGVSRVWVSVLPAVSRTEGTCLTLLLRGLAPPPRVIEEAFFALPSERFTTKHLPLYNPSFGYVADGLMLSWAVRNAQATAFVSTLYTQP---LWATTPNVVGLLLVHDVLPETFGWDMSKGKWSQKANAVAKASSVVAVSQHTAKEFLRVYPPHITTPLASGNAIGSQSLRSVWVAHNGVNTAVYRPSNAFRRLARLGPGTPYVMIVGSRHGYKNARAAYRALGLAATPTVDAASSGSASPVGTLALVLVGGGRRGGEESEPGIVDDNLLAQGYAGAKALLHLSLAEGFGLTVLEAFACGCPVIAADIPPIREIAG 984
VDGVVFQ A + G+SRVW ++LP ++ L LL RG + P + + P + +VAD L L+W + AF ST YT+P LWA VV LLVHD+ PE F W S W K +A+ +A +++AVS T YP G+++ R +A NG + +++ P A PY ++VG R GYKN A RA A + G +P L L+ G S + D+ LA+ Y+GA AL+++S EGFGL VLEA ACGCPV+AA IP + E+ G
Sbjct: 903 VDGVVFQRQAGRGAGISRVWANLLPRLADAAAGGLVLLERGGSQLPASLAALH---------RRAAPPFPDDHDHVADALSLAWLCEGS--AAFASTEYTRPDGRLWAG--RVV--LLVHDLTPEKFAWPRSP-YWDLKRSAIEQADAILAVSAATRGALATFYP-------------GARA-RDAGLAPNGFDASIFYPRPPAEGAALAKTAKPYALVVGYRRGYKNGLAVARAFYDARARHLHLWLVGGDAPSAD-ELALLAGPHYNASFSHSARLSDDDLARAYSGAAALVYMSRDEGFGLPVLEAMACGCPVVAARIPAVAELVG 1200
BLAST of mRNA_Ecto-sp13_S_contig12564.2122.1 vs. uniprot
Match: A0A8D5WMC8_9PROT (D-inositol-3-phosphate glycosyltransferase n=1 Tax=Alphaproteobacteria bacterium SO-S41 TaxID=2829083 RepID=A0A8D5WMC8_9PROT) HSP 1 Score: 146 bits (369), Expect = 2.850e-37 Identity = 112/336 (33.33%), Postives = 167/336 (49.70%), Query Frame = 1
Query: 1 LVVDGVVFQVDAAKPQGVSRVWVSVLPAVSRTEGTCLTLLLRGLAPPPRVIEEAFFALPSERFTTKHLPLYNPSFGYVADGLMLSWAVRNAQATAFVSTLYTQPLWATTPNVVGLLLVHDVLPETFGWDMSKGKWSQKANAVAKASSVVAVSQHTAKEFLRVYPPHITTPLASGNAIGSQSLRSVWVAHNGVNTAVYRPSN-----AFRRLARLGPGTPYVMIVGSRH---GYKNARAAYRALGLAATPTVDAASSGSASPVGTLALVLVGGGRRGGEESEPGIVDDNLLAQGYAGAKALLHLSLAEGFGLTVLEAFACGCPVIAADIPPIREIAG 984
L++DGV FQ+ + G++R+W SVLP++ + + +L RG P + F +R+T D +++ + F +T YT PL TTP L+V+D++PE FG+D+S W +KA A++ A S +++S++T + L+ YP + VAH G + +V++P + AFR A +G PYV++VGSR GYKN R + A+ D G V +L L+ G R +E +V D LA Y GA AL++ SL EGFGL VLEA ACGCPVI + E+AG
Sbjct: 3 LLIDGVFFQLAQS---GIARIWQSVLPSLIADKRMEVLVLDRGGLPAIDGMTRVPFPAYKDRYTAD-------------DSILIQKICDLYKIDVFTTTYYTTPL--TTPM---FLMVYDMIPELFGFDLSARHWREKALAISYARSFISISENTRSDLLQFYP----------------DAEDIAVAHLGYDRSVFKPLDKQAIEAFREKAGMGR-RPYVLLVGSREQHLGYKNTRLLFEAIAATGRSDFDVLCIGGEETVHEDSLALLPPGVR----AERVVVSDADLAAAYNGAVALVYPSLYEGFGLPVLEAMACGCPVITTSRGSLSEVAG 296
BLAST of mRNA_Ecto-sp13_S_contig12564.2122.1 vs. uniprot
Match: A0A5C4JSU1_9HYPH (Glycosyltransferase family 4 protein n=1 Tax=Martelella lutilitoris TaxID=2583532 RepID=A0A5C4JSU1_9HYPH) HSP 1 Score: 134 bits (338), Expect = 9.960e-33 Identity = 113/344 (32.85%), Postives = 166/344 (48.26%), Query Frame = 1
Query: 1 LVVDGVVFQVDAAKPQGVSRVWVSVLPAVSRTEGTCLTLLLRGLAPPPRVIEEAFFALPSERFTTKHLPLYNPSFGYVADGLMLSWAVRNAQATAFVSTLYTQPLWATTPNVVGLLLVHDVLPETFGWDMSKGKWSQKANAVAKASSVVAVSQHTAKEFLRVYPPHITTPLASGNAIGSQSLRSVWVAHNGVNTAVYRP---SNAFRRLARLGPGTPYVMIVGSR---HGYKNARAAYRALGLAATPTVDAASSGSASPVGTLALVLVGG----------GRRGGEESEPGIVDDNLLAQGYAGAKALLHLSLAEGFGLTVLEAFACGCPVIAADIPPIREIAG 984
L+VDGV FQV G++RVW ++LP ++ +T+L RG P + + PS FT+ AD L++ +A FVST +T P T +L+VHD++PE F +D+S+ W +K A+ A + VS +T ++ LR+YP S V VAH GV++ V+ + R + Y ++VGSR HGYKNA + AL SS + P L ++ VGG G R G ++ + D+ LA Y+GA+AL++ SL EGFGL V+EA +CGCPVI + E+AG
Sbjct: 3 LLVDGVFFQVADT---GIARVWRALLPRLAAFPEFDITVLDRGRC--PLISGITYVDFPSHTFTST-----------AADSLLIQEFAEKYKADVFVSTYFTTPTRVPT-----VLIVHDMIPEVFDFDLSQRGWQEKETAICFAQYYLCVSNNTRRDLLRLYP--------------EISPERVSVAHCGVDSDVFYERSRQDILRFRDKYEIAENYCILVGSREQIHGYKNAGLLFEAL--KEEGRTPGGSSIESFPA--LQILCVGGEPEIQPHFAAGLRAGITAKRLELSDDELACAYSGARALVYPSLYEGFGLPVVEAMSCGCPVITTPHGSLEEVAG 307
BLAST of mRNA_Ecto-sp13_S_contig12564.2122.1 vs. uniprot
Match: UPI001A9DE8A4 (glycosyltransferase family 4 protein n=1 Tax=Brevundimonas goettingensis TaxID=2774190 RepID=UPI001A9DE8A4) HSP 1 Score: 132 bits (331), Expect = 8.570e-32 Identity = 108/335 (32.24%), Postives = 163/335 (48.66%), Query Frame = 1
Query: 1 LVVDGVVFQVDAAKPQGVSRVWVSVLPAVSRTEGTCLTLLLRGLAPPPRVIEEAFFALPSERFTTKHLPLYNPSFGYVADGLMLSWAVRNAQATAFVSTLYTQPLWATTPNVVGLLLVHDVLPETFGWDMSKGKWSQKANAVAKASSVVAVSQHTAKEFLRVYPPHITTPLASGNAIGSQSLRSVWVAHNGVNTAVYRPSN--AFRRLA-RLGPGTPYVMIVGSRH---GYKNARAAYRALGLAATPTVDAASSGSASPVGTLALVLVGGGRRGGEESEPGIVDDNL-LAQGYAGAKALLHLSLAEGFGLTVLEAFACGCPVIAADIPPIREIAG 984
L++DGV FQ+ ++ G++RVW S+LP + + +L RG P ++ F + +T D +++ + F ST YT PL TTP L+V+D++PE F +D+S W +KA A++ A S +++S+ T + +R+YP + + VA G +TAV++P+ A + L +G PYV++VGSR GYKN R + A+ D G + +L L+ G + IV N LA Y GA AL++ SL EGFGL VLEA ACGCPVI + E+AG
Sbjct: 3 LLIDGVFFQLASS---GIARVWQSILPLLIADTRLEVLILDRGGIPDIPGLKRIPFPAYKDHYTAD-------------DSILIQKVCDFYKVDVFTSTYYTTPL--TTPM---FLMVYDMIPELFDFDLSHRHWQEKAVAISYARSTISISESTRTDLIRLYP---------------HTANAAEVALLGYDTAVFKPATEAAVQALRDAVGFDRPYVVMVGSREQHLGYKNTRLFFDAVAAIKRTDFDILCIGGEPEINPASLALLPPGMK-----IKRIVATNAELAAAYTGALALVYPSLYEGFGLPVLEAMACGCPVITTKRGSLGEVAG 296
BLAST of mRNA_Ecto-sp13_S_contig12564.2122.1 vs. uniprot
Match: A0A218QGT2_9CYAN (Group 1 glycosyl transferase n=1 Tax=Tolypothrix sp. NIES-4075 TaxID=2005459 RepID=A0A218QGT2_9CYAN) HSP 1 Score: 135 bits (339), Expect = 2.190e-31 Identity = 114/336 (33.93%), Postives = 169/336 (50.30%), Query Frame = 1
Query: 1 LVVDGVVFQVDAAKPQGVSRVWVSVLPAVSRTEGTCLTLLLRGLAPPPRVIEEAFFA--LPSERFTTKHLPLYNPSFGYVADGLMLSWAVRNAQATAFVSTLYTQPLWATTPNVVGLLLVHDVLPETFGWDMSKGKWSQKANAVAKASSVVAVSQHTAKEFLRVYPPHITTPLASGNAIGSQSLRSVWVAHNGVNTAVYRPS-----NAFRRLARLGPGTPYVMIVGSRHGYKNARAAYRALG-LAATPTVDAASSGSASPVGTLALVLVGGGRRGGEESEPGIVDDNLLAQGYAGAKALLHLSLAEGFGLTVLEAFACGCPVIAADIPPIREIAG 984
++VDGV FQ+ G++RVW S+L L G A VI+ A A +P ++ T L YN + +D ML A+ F+ST YT P TTP+V L HD++PE FGW+++ W +K + AS+ +AVS++TA++ ++ + +SV +A NGVN ++ P+ NAF+ + G PY ++VG+ +GYKN+ + A LA++ D S+G +G LA + G + D+ LA Y+GA AL++ S EGFGL VLEA ACGCPVI I E+AG
Sbjct: 794 IIVDGVFFQLYKT---GIARVWKSLLEE----------WLDNGFAKYIVVIDRAGTAPKIPGIQYRTVELYDYNNTD---SDRQMLQQVCDEEDASLFISTYYTTP--TTTPSV---FLAHDMIPELFGWNLNNAMWREKHYGIKHASAYIAVSENTARDLVKCF--------------SYIPFKSVIIAQNGVNHKIFSPAQPEELNAFK--TKYGIAKPYFILVGAGNGYKNSILFFEAFSQLASSYGFDIVSTG----IGGLADLDFRAYTSGSIVHILQLSDEE-LAIAYSGAVALIYPSKYEGFGLPVLEAIACGCPVITCPNASIPEVAG 1087
BLAST of mRNA_Ecto-sp13_S_contig12564.2122.1 vs. uniprot
Match: UPI0015E00421 (glycosyltransferase family 4 protein n=1 Tax=unclassified Martelella TaxID=2629616 RepID=UPI0015E00421) HSP 1 Score: 130 bits (328), Expect = 2.690e-31 Identity = 109/346 (31.50%), Postives = 169/346 (48.84%), Query Frame = 1
Query: 1 LVVDGVVFQVDAAKPQGVSRVWVSVLPAVSRTEGTCLTLLLRGLAPPPRVIEEAFFALPSERFTTKHLPLYNPSFGYVADGLMLSWAVRNAQATAFVSTLYTQPLWATTPNVVGLLLVHDVLPETFGWDMSKGKWSQKANAVAKASSVVAVSQHTAKEFLRVYPPHITTPLASGNAIGSQSLRSVWVAHNGVNTAVYRPS-----NAFRRLARLGPGTPYVMIVGSRH---GYKNARAAYRALGLAATPTVDAASSGSASPVGTLALVLVGGGRRGGEESEPGIVD----------DNLLAQGYAGAKALLHLSLAEGFGLTVLEAFACGCPVIAADIPPIREIAG 984
L+VDGV FQ+ + G++RVW S+LP ++ +T+L RG +P IE + PS FT+ +D L++ ++ A F++T YT P + +L+V+D++PE FG+DM W +K A++ A + +S++T K+ LR+YP V A+ G+++ +RP +AFR+ + Y ++VGSR GYKNA + AL D S S L ++ VGG + G+ D D+ LA Y GA+AL++ SL EGFGL V+EA +CGCPVI ++E+AG
Sbjct: 3 LLVDGVFFQLSNS---GIARVWRSLLPRLAAFPDIEITVLDRGRSPRFAGIE--YIDFPSYTFTST-----------ASDSLLIDVFAKDCDADVFLTTYYTTPT-----QIPSVLIVYDMIPELFGFDMKLRAWQEKDLAISFAQYCLCISENTRKDLLRIYPKF--------------DPERVTTAYCGLDSKAFRPREEKEVSAFRKEYEV--AEDYCILVGSREQHTGYKNAGLLFDALKKQGQ-FFDVFDQSSRSE---LQILCVGGEPVVQKHFTEGLPDNITVKRVDLTDDELACAYTGARALVYPSLYEGFGLPVVEAMSCGCPVITTPHGSLKEVAG 307
BLAST of mRNA_Ecto-sp13_S_contig12564.2122.1 vs. uniprot
Match: A0A519ZRX2_9BURK (FkbM family methyltransferase n=1 Tax=Rubrivivax sp. TaxID=50259 RepID=A0A519ZRX2_9BURK) HSP 1 Score: 133 bits (335), Expect = 6.180e-31 Identity = 115/339 (33.92%), Postives = 158/339 (46.61%), Query Frame = 1
Query: 1 LVVDGVVFQVDAAKPQGVSRVWVSVLPAVSRTEGTCLTLLLRGLAPPPRVIEEAFFALPSERFTTKHLP----LYNPSFGYV---ADGLMLSWAVRNAQATAFVSTLYTQPLWATTPNVVGLLLVHDVLPETFGWDMSKGKWSQKANAVAKASSVVAVSQHTAKEFLRVYPPHITTPLASGNAIGSQSLRSVWVAHNGVNTAVYRPSNAFRRLARLGPGTPYVMIVGSRHGYKNARAAYRALGLAATP----TVDAASSGSASPVGTLALVLVGGGRRGGEESEPGIVDDNLLAQGYAGAKALLHLSLAEGFGLTVLEAFACGCPVIAADIPPIREIAG 984
+VVDGV FQ+ + G++RVW + R+ G+A VI+ A + H+P + P FGY D + QA F+ST YT PL +TP+ L++VHD++PE G+D+S+ W QK A+A AS V VS +TA + R H+ P S V VA NG + R AR G PY ++ GSR YKN + + A L T+ G+ P LAL G E + GI+ D + Y+GA AL + SL EGFGL VLEA ACGCPV+ D+ + E+ G
Sbjct: 278 IVVDGVFFQIGRS---GIARVWTKLFEEWVRS----------GVADHVTVIDRAG--------SMPHVPGLQVVPGPPFGYNDVDGDRQRVQRLCDELQAEVFISTYYTMPL--STPS---LMMVHDMIPEVLGFDLSEPMWRQKQAAMAYASRFVCVSHNTAADLKR----HLARPDLS-----------VHVASNGCDFTPASVEALARFKARHGLQRPYFLLSGSRGDYKNGKLFFEAFALLGDERSHYTILCTGGGTVEPE-LLALAE-------GAEVKVGILSDADMLCAYSGALALAYPSLYEGFGLPVLEAMACGCPVVTTDVASLPEVGG 567
BLAST of mRNA_Ecto-sp13_S_contig12564.2122.1 vs. uniprot
Match: A0A1I3UIP3_9HYPH (Glycosyltransferase involved in cell wall bisynthesis n=1 Tax=Methylobacterium brachiatum TaxID=269660 RepID=A0A1I3UIP3_9HYPH) HSP 1 Score: 129 bits (325), Expect = 6.400e-31 Identity = 109/339 (32.15%), Postives = 162/339 (47.79%), Query Frame = 1
Query: 1 LVVDGVVFQVDAAKPQGVSRVWVSVLPAVSRTEGTCLTLLLRGLAPPPRVIEEAFFALPSERFTTKHLPLYNPSFGYVADGLMLSWAVRNAQATAFVSTLYTQPLWATTPNVVGLLLVHDVLPETFGWDMSKGKWSQKANAVAKASSVVAVSQHTAKEFLRVYPPHITTPLASGNAIGSQSLRSVWVAHNGVNTAVYRP---SNAFRRLARLGPGTPYVMIVGSRH---GYKNARAAYRALGLAATPTVDAASSGSASPVGTLALVLVGGGRRGGEESEPGIV-------DDNLLAQGYAGAKALLHLSLAEGFGLTVLEAFACGCPVIAADIPPIREI 978
LVVDGV FQ++ G++R+W S+L ++R + + LL RG +P VIE T P Y+ ++ D +M+ A F+ST YT PL TTP+ L +V+D++PE FG+D++ W +K NA+A A +VA+S T ++ + YP L +G+ + V++ G + +V+ P S+ R G Y+++VG R YKNA + + D G V L + P V DD LA Y+GA AL++ SL EGFGL V+EA ACGCPVI + + EI
Sbjct: 3 LVVDGVFFQLETT---GIARLWRSLLGELARNDALTIFLLDRGRSP---VIENV---------TAIPFPRYSEAYS-ADDSIMIQRVCDFHGADVFLSTYYTTPL--TTPS---LQIVYDMIPERFGFDLTARMWKEKENAIAFARKLVAISNRTREDLMEFYPE-----LNAGDTM---------VSYPGCDASVFYPRDGSDLTRFRVANGVRENYLILVGKREQNKNYKNAALLFDTISEYGVEDFDVLCIGGEKEVNQDVLNTL-----------PSAVSVKRIEADDQELAVAYSGASALVYPSLYEGFGLPVIEAMACGCPVITTALGSLGEI 295 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12564.2122.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig12564.2122.1 >prot_Ecto-sp13_S_contig12564.2122.1 ID=prot_Ecto-sp13_S_contig12564.2122.1|Name=mRNA_Ecto-sp13_S_contig12564.2122.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=328bp LVVDGVVFQVDAAKPQGVSRVWVSVLPAVSRTEGTCLTLLLRGLAPPPRVback to top mRNA from alignment at Ecto-sp13_S_contig12564:3055..4624- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig12564.2122.1 ID=mRNA_Ecto-sp13_S_contig12564.2122.1|Name=mRNA_Ecto-sp13_S_contig12564.2122.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1570bp|location=Sequence derived from alignment at Ecto-sp13_S_contig12564:3055..4624- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig12564:3055..4624- >mRNA_Ecto-sp13_S_contig12564.2122.1 ID=mRNA_Ecto-sp13_S_contig12564.2122.1|Name=mRNA_Ecto-sp13_S_contig12564.2122.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=984bp|location=Sequence derived from alignment at Ecto-sp13_S_contig12564:3055..4624- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |