mRNA_Ecto-sp13_S_contig125.2074.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig125.2074.1 vs. uniprot
Match: D7FRM4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRM4_ECTSI) HSP 1 Score: 804 bits (2077), Expect = 7.630e-291 Identity = 410/431 (95.13%), Postives = 421/431 (97.68%), Query Frame = 1
Query: 1 SSSNSATWAVSPLCGLDNKRILVRVVVELLHHTVGLNGRHRSRTLGPGVEAEALLAARILLREREGAERLMDQEALETYTKAAQEDGDAVCGFRVSLMALKCLNNAVWDQPKGQISFVQLGGLDMLVGLLQASRPASVLYFACRIFNVVGSSNPTAFNELKKKRDLLLLLLSVLAGCVRCTHPPFPGGEDRVKLMVQALQGLFLLGVRFTPEEKKKALEGDSMKRLGYVLVDILHLDHAELDVFMAKLQVLNLLLDMPGSFAEVLLEHGCLPRVVQLVELQLVRQEFQDGGVDAAAELTPGLLVLNKMVLASEDSKMAVKSAIFPPEADKVWKERLEREKRELASLAGDDYKRAEKFIKDKRVHPVDAPKGTLRARLLKQMTATESSSKTAVSDLLFNLCADEEEFTTRCGFGNAVNTLRLRGMISVPGIG 1293
S+++ ATWAVSP+CGLDNKRILVRVVVELLHHTVGLNGRHRSRTLGPGVEAEALLAARILLREREGAERLMDQEALETYTKAAQEDGDA CGFRVSLMALKCLNNAVWDQPKGQISFVQLGGLDMLVGLLQASRPASVLYFACRIFNVVGSSNPTAFNELKKK+DLLLLLLSVLAGCVRCTHPPFPGGEDRVKLMVQALQGLFLLGVRFT EEKKKALEGD+MKRLGYVLVDILHLDHAE+DVFMAKLQVLNLLLDMPG FAEVLLEHGCLPRVVQLVELQLVRQEFQDGGVDAAAELTPGLLVLNKMVLASE+SKMAVK AIFPPEAD+VWK+RLEREKRELASL GD+YKRAEK KDKRVHPVDAPKGTLRAR LKQMTATESSSKTAVSDLLFNLC DEEEFTTRCGFGNAVNTLRLRGMISVPGIG
Sbjct: 28 STAHEATWAVSPVCGLDNKRILVRVVVELLHHTVGLNGRHRSRTLGPGVEAEALLAARILLREREGAERLMDQEALETYTKAAQEDGDAACGFRVSLMALKCLNNAVWDQPKGQISFVQLGGLDMLVGLLQASRPASVLYFACRIFNVVGSSNPTAFNELKKKQDLLLLLLSVLAGCVRCTHPPFPGGEDRVKLMVQALQGLFLLGVRFTQEEKKKALEGDTMKRLGYVLVDILHLDHAEIDVFMAKLQVLNLLLDMPGGFAEVLLEHGCLPRVVQLVELQLVRQEFQDGGVDAAAELTPGLLVLNKMVLASEESKMAVKRAIFPPEADEVWKQRLEREKRELASLTGDNYKRAEKISKDKRVHPVDAPKGTLRARFLKQMTATESSSKTAVSDLLFNLCVDEEEFTTRCGFGNAVNTLRLRGMISVPGIG 458
BLAST of mRNA_Ecto-sp13_S_contig125.2074.1 vs. uniprot
Match: A0A7S4HXF2_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4HXF2_9STRA) HSP 1 Score: 158 bits (399), Expect = 4.000e-38 Identity = 96/279 (34.41%), Postives = 162/279 (58.06%), Query Frame = 1
Query: 484 KKRDLLLLLLSVLAGCVRCTHPPFPG---GEDRVKLMVQALQGLFLLGVRFTPEEKKKALEGDSMKRLGYVLVDILHLDHAELDVFMAKLQVLNLLLDMPGSFAEVLLEHGCLPRVVQLVELQL---VRQEFQDGGVDAAAELTPGLLVLNKMVLASEDSKMAVKSAIFPPEADKVWKERLEREKREL-----ASLAGDDYKRAEKFIKDKRVHPVDAPKGTLRARLLKQMTATESSSKTAVSDLLFNLC-ADEEEFTTRCGFGNAVNTLRLRGMISVP 1284
K +DL +L++ LA +R + PPFPG G+ R L V+ ++ +F+L +R + + D M ++G ++ DIL L +A+ ++ KL +NLL+D P + + L+ + +P ++ ++ LQL V + G DAAA + P L+ L ++ A++D K +K IFPPEA+K ++ + EK +L S+ G + K + P+DAP+GT+R +LL+ MT TES+ K S+ ++ LC D EF R GFGNAV+ L ++G++++P
Sbjct: 323 KDKDLASVLVATLAWTLR-SDPPFPGTDPGDRRSDLAVEVMRIMFVLQLRHASNNDEVKNDNDMMTQIGILICDILQLPNADFRIYDIKLAAVNLLMDCPAEYGQFLMSNNGIPPLLAVLTLQLTTVVVERTGSGAADAAA-IVPILIALTRLSAANDDVKKVIKEGIFPPEAEKGFQSKAREEKEKLRGGDRGSVGG---------LGAKNMSPLDAPRGTVRWKLLRLMTWTESNVKRCASEFIWTLCNGDATEFVLRTGFGNAVHILGIKGLVTIP 590
BLAST of mRNA_Ecto-sp13_S_contig125.2074.1 vs. uniprot
Match: A0A7S2XIN1_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XIN1_9STRA) HSP 1 Score: 146 bits (368), Expect = 6.730e-34 Identity = 107/353 (30.31%), Postives = 181/353 (51.27%), Query Frame = 1
Query: 319 VWDQPKGQISFVQLGGLDMLVGLL--QASRPASVLYFACRIFNVVGS------SNPTAFNELKKKR----------DLLLLLLSVLAGCVRCTHPPFPG---GEDRVKLMVQALQGLFLL-------GVRFTPEEKKKALEGDSMKRLGYVLVDILHLDHAELDVFMAKLQVLNLLLDMPGSFAEVLLEHGCLPRVVQLVELQLVRQEFQDGGVDA--AAELTPGLLVLNKMVLASEDSKMAVKSAIFPPEADKVWKERLEREKRELASLAGDDYKRAEKFIKDKRVHPVDAPKGTLRARLLKQMTATESSSKTAVSDLLFNLC-ADEEEFTTRCGFGNAVNTLRLRGMISVP 1284
VW Q + G+ +L+ LL + S A +L + N++GS TA EL +KR D+ +L+ L ++ + P FPG + R L ++ L+ L+ L R + E ++ D+MK++G +L IL+L + V+ KL +NLL+D P +A++LL +G +P ++ +++LQ+ + ++GG A + P L V+N+ A+ + VK +FP D + ++ E+ + + G + + P+DAPKGTLR +++ MTATES+SK S+LL+ LC AD EF R GFGNAV+ L ++G++ +P
Sbjct: 270 VWSTKARQELIDSVNGIPILMDLLLSKVSSTALLLSIVRNVHNLIGSVPGVVNKMDTAIEELIEKRAPDDFVKGGTDITSVLVETLTWTIK-SEPSFPGDASSDRRADLALEILRVLYALRNGQIAGSQRGSFSEIQEKRIEDNMKKMGALLCAILNLPNENKQVYDVKLAAINLLMDAPIEYAQILLTNGNIPSLLMILDLQVTKVVVEEGGAKTSNATSIIPILAVMNRFSAANPCIQNIVKEDVFPTNHDDGTVDEVKTEEMDNEAPGG------------RNMRPMDAPKGTLRYNIIQLMTATESNSKRLASELLWTLCDADPNEFVRRTGFGNAVHMLGMKGLVKLP 609
BLAST of mRNA_Ecto-sp13_S_contig125.2074.1 vs. uniprot
Match: A0A835YV73_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YV73_9STRA) HSP 1 Score: 141 bits (356), Expect = 2.110e-32 Identity = 149/562 (26.51%), Postives = 224/562 (39.86%), Query Frame = 1
Query: 4 SSNSATWAVSPLCGLDNKRILVRVVVELLHHTVGLNGRHRSRTLGPGVEAEALLAARILLREREGAERLMDQEALETYTKAAQEDGDAVCGFRVSLMALKCLNNAVWDQ---PKGQISFVQLGGLDML-------------------VGLLQASRPASVLY-----------------------------FACRIFNVVGSSNPTAFNELKKK---------------------RDLLLLLLSVLAGCVRCTHPPFPGGEDRVKLMVQ----------------------------------------ALQGLFLLG---------VRFTPEEKKKALEGDSMKRLGYVLVDILHLDHAELDVFMAKLQVLNLLLDMPGSFAEVLLEHGCLPRVVQLVELQLVRQEFQDGGVDAAAELTPGLLVLNKMVLASEDSKMAVKSAIFPPEADKVWKERLEREKRELASLAGDDYKRAEKFIKDKRVHPVDAPKGTLRARLLKQMTATESSSKTAVSDLLFNLC---ADEEEFTT--------------RCGFGNAVNTLRLRGMI 1275
S +S + + CG K +V V++ + + R+ ++A AL AA++LLRE +G+ LM EA E Y KAAQE DA GF V+ + CL N + + PK ++ L L LL +RPA +L+ A R + ++ A +++ L++L+S+LA CVRC PPFP G L + L+ L+ L + E L + RLG VL + L L H + + KL V+NLL+ MP ++A L E+G LP +V++ ELQL+ EF+ D A L P L VL ++ + + +K+ IFP E D W++ R A D A K +++R+HP DAP G+LRARL+ +T ES+S+ +LL+ LC A E+ R GFG+ V LR RG++
Sbjct: 32 SEHSTSAGILQACGEAAKDKVVAAVLQ------AMQPQKRADAAALSLQAAALSAAKVLLREAQGSAPLMTMEASEVYLKAAQESRDADEGFAVATAGVSCLVNLLVHEAAAPKPVVAANMLVALPRASTAPRSXXXXXXXXXXXXXXXLLGGARPAPLLHNSXXXXXXXXXXXXXXXXXXXXXXXXXXXLAARALYRLCATRAPAAAVVREGCAXXXXXXXXXXXXXAGTGDCGKTLVILVSLLAWCVRCEDPPFPQGAGVAPLATEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVLKLLYFLASTGAVDVERAQGAAREVITVLGQALLLRLGQVLAEALLLPHDRAEAYECKLHVVNLLMHMPATYALYLSENGILPSLVRITELQLLACEFEADTFDPAVGLAPILAVLAAAAGSAAEPRRILKALIFPAETDAQWEQYQRRP-------AAQDEAEA-KAERERRMHPADAPPGSLRARLIACLTMVESTSRRFAGELLWALCEGSAGEDXXXXXXXXXXXXXXXXXYRVGFGSGVGLLRTRGLL 579
BLAST of mRNA_Ecto-sp13_S_contig125.2074.1 vs. uniprot
Match: B8C3E5_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C3E5_THAPS) HSP 1 Score: 139 bits (351), Expect = 5.170e-32 Identity = 95/324 (29.32%), Postives = 176/324 (54.32%), Query Frame = 1
Query: 373 MLVGLLQASRPASVLYFACRIFNVVGSSNPTAFNEL---------------KKKRDLLLLLLSVLAGCVRCTHPPFPGGE--DRVKLMVQALQGLFLLGVRFTPEEKKKALEGDSMKRLGYVLVDILHLDHAELDVFMAKLQVLNLLLDMPGSFAEVL-LEHGCLPRV-VQLVELQLVRQEFQDGGVDAAAELTPGLLVLNKMVLASEDSKMAVKSAIFPPEADKVWKERLEREKRELASLAGDDYKRAEKFIKDKRVHPVDAPKGTLRARLLKQMTATESSSKTAVSDLLFNLC-ADEEEFTTRCGFGNAVNTLRLRGMISVP 1284
++ L++ +PAS ++ R + + +++PT+ + + + LL +L++ L+ +R + P FPG E R L+++ L+ LF + + D+M R+G +L ++L ++++ V+ KL V+ LLL+ P ++E L + G +P + + +L +V E + AA P LLVL K+ AS V+ +FPP+A++ +KE+ +L+ K++E ++ K + P+DAP+GTLR +L++ MT TES+ K + S+LL+ LC D +F R GFGNA++ L ++G +++P
Sbjct: 211 LMKALMKGDQPASRVFSIVRNVHHLIAAHPTSIGTMDGAVQKITADELPNNEYAQGLLEVLVATLSWALR-SEPTFPGDEYDRRPDLVLEILRSLFAMDAGLSSNSSHNK---DTMTRIGIILCELLQYSNSDMRVYQCKLAVVALLLNAPDDYSEYLAVNRGIIPLIDIMAYQLSVVVIERTGSSAEDAAAAVPILLVLRKLAQASSSVLKLVQDEVFPPDAEEAFKEK---------ALSEIMKKQSEGTVRAKNMAPLDAPRGTLRWKLIRLMTWTESNVKRSASELLWTLCDEDSTQFVLRTGFGNAIHFLGMKGCVNLP 521
BLAST of mRNA_Ecto-sp13_S_contig125.2074.1 vs. uniprot
Match: A0A7S2G9N3_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G9N3_9STRA) HSP 1 Score: 100 bits (250), Expect = 3.470e-21 Identity = 60/149 (40.27%), Postives = 87/149 (58.39%), Query Frame = 1
Query: 844 LVRQEFQDGGV-DAAAELTPGLLVLNKMVLASEDSKMAVKSAIFPPEADKVWKERLEREKRELASLAGDDYKRAEKFIKD-KRVHPVDAPKGTLRARLLKQMTATESSSKTAVSDLLFNLCADE-EEFTTRCGFGNAVNTLRLRGMISV 1281
++R+ DG D + P ++ L K+ ASED+K +K+ +FPP+AD+ WKERL +K E + G+D K +D +R+HPVDAP G+LR L K + E +K V +LL LC EFT R G+GNAV ++G IS+
Sbjct: 15 MLRENSPDGRQGDLRTYVLPVVIALKKVAEASEDAKAMMKTLLFPPDADRAWKERLVAQKLEDDEVTGEDEIAERKKERDAERMHPVDAPDGSLRKVLFKVICCIEEHTKRTVCELLLELCDQNMNEFTLRAGYGNAVFMHHIKGAISI 163
BLAST of mRNA_Ecto-sp13_S_contig125.2074.1 vs. uniprot
Match: A0A7S1YQH7_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1YQH7_9STRA) HSP 1 Score: 105 bits (261), Expect = 4.520e-20 Identity = 86/294 (29.25%), Postives = 148/294 (50.34%), Query Frame = 1
Query: 493 DLLLLLLSVLAGCVRCTHPPFPGGEDRVK-----LMVQALQGLFLLG-----VRFTPEEKKKALEGDSMKRLGYVLVDILHLDHAELDVFMAKLQVLNLLLDMPGSFAEVLLEHGCLPRVVQLVELQLVRQEFQ-----------------DGGVDAAAELTPGLLVLNKMVLASEDSKMAVKSAIFPPE-ADKVWKERLEREKRELASLAGDDYKRAEKFIKDKRVHPVDAP-KGTLRARLLKQMTATESSSKTAVSDLLFNLC-ADEEEFTTRCGFGNAVNTLRLRGMISVP 1284
D +L++ LA C++ + P FPG +DR+ + ++ L+ LF LG + D M ++G +L DILHL +A + + K+ ++LL+D P ++ LL + C+ ++ ++ELQ+ + G D AA LTP L+VL K A+ + +K IFP E D+++++ ++ K+ + P+D P K TLR +++K MT +ES+ K ++L++ LC +D EF R GFGNAV+ L +RG +++P
Sbjct: 377 DATTVLIATLAWCIK-SSPAFPG-KDRINDRRSDIALEILRILFALGGSDNASSANNNNRTNNPHFDLMTQMGILLGDILHLPNANVATYEVKVASVSLLMDTPINYGYYLLANDCIRTILDVLELQVSSVVLERDVSGTRSSSFGGDSKVSGSNDDAAALTPILIVLIKYGTANPEILRQMKERIFPKEECDELYQKAIDDLPPSXXXXXXXXXXXXXXXAKN--MSPIDNPSKRTLRYKVIKLMTWSESNIKRLSAELMWILCNSDPTEFILRTGFGNAVHMLGMRGFVNIP 666
BLAST of mRNA_Ecto-sp13_S_contig125.2074.1 vs. uniprot
Match: F0YKC8_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YKC8_AURAN) HSP 1 Score: 100 bits (249), Expect = 4.400e-19 Identity = 74/214 (34.58%), Postives = 111/214 (51.87%), Query Frame = 1
Query: 646 KALEGDSMKRLGYVLVDILHLDHAELDVFMAKLQVLNLLLDMPGSFAEVLLEHGCLPRVVQLVELQLVRQEFQDGGVDAAAELTPGLLVLNKMVLASEDSKMAVKSAIFPPEADKVWKERLEREKRELASLAGDDYKRAEKFIKDKRVHPVDAPKGTLRARLLKQMTATESSSKTAVSDLLFNLC-ADEEEFTTRCGFGNAVNTLRLRGMISVP 1284
+A + ++ +G L +L A DV A L +NLL P ++ L+E+G +PR+ L+E L ++ L P L K+ AS K +K IFPPEAD VW +L K A GD+ +K R+HPVDAP+ R+ LLK M E +K V++L++ LC D +EFT RCG GNA+ L+++ ++ +P
Sbjct: 214 EAPDDPAVTLIGVCLRAVLCGARAPYDVPPACLDAVNLLTCAPKTYYCWLVENGAVPRLCNLLEGILNDYVVENKYESPETTLPPLLDAFLKLCAASSKGKRQLKEWIFPPEADAVWMPKLAEAK---ARAKGDEA--LQKEFDAARIHPVDAPRYATRSLLLKLMCDLEPVTKRLVAELVWALCDEDADEFTVRCGVGNAIAFLQIKKLMPMP 422
BLAST of mRNA_Ecto-sp13_S_contig125.2074.1 vs. uniprot
Match: A0A7S1BQP5_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BQP5_9STRA) HSP 1 Score: 97.8 bits (242), Expect = 7.980e-18 Identity = 76/261 (29.12%), Postives = 133/261 (50.96%), Query Frame = 1
Query: 562 GEDRVKLMVQALQGLFLLGVRFTPEEKKKA------LEGDSMKRLGYVLVDILHLDHAELDVFMAKLQVLNLLLDMPGSFAEVLLEHGCLPRVVQLVELQLVRQEFQDG-------------GVDAAAELTPGLLVLNKMVLASEDSKMAVKSAIFPPEADKVWKERLEREKRELASLAGDDYKRAEKFIKDKRVHPVDAPKGTLRARLLKQMTATESSSKTAVSDLLFNLCADEEE-FTTRCGFGNAVNTLRLRGMISVP 1284
GE R ++V+ L+ ++ L + E + + + ++M LG +L ++L +A + ++ KL V+ LL+D+P ++ LL +G + +V ++ LQL+ + G DA+ L P L+VL+K+ A+ V +FPPE +K K + E +L D+ A + GTL+ L+K MT+T+S+ K S+LL+ LC + ++ F + GFGNA+ TL L+G+IS+P
Sbjct: 331 GELRSGVVVEILRFMYTLNFNHSSELLETSSCNIAGADEETMTHLGVILCEMLQFPNANIYLYEIKLGVVKLLMDLPEGYSFYLLLNGGIDPLVDILTLQLLFNTIEGAPISSEWNHRSGTNGNDASVALLPVLVVLSKLCKANTTICSQVHDRVFPPE-EKYEKGGTKEENEKLILEKCPDFSTATFY-------------GTLQDMLIKLMTSTDSNIKRTTSELLWILCNENKDMFVEKTGFGNAIYTLCLKGLISMP 577
BLAST of mRNA_Ecto-sp13_S_contig125.2074.1 vs. uniprot
Match: A0A448ZLT4_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZLT4_9STRA) HSP 1 Score: 89.4 bits (220), Expect = 3.280e-15 Identity = 61/189 (32.28%), Postives = 101/189 (53.44%), Query Frame = 1
Query: 739 KLQVLNLLLDMPGSFAEVLLEHGCLPRVVQLVELQL---VRQEFQDGGVDAAAELTPGLLVLNKMVLASEDSKMAVKSAIFPPEADKVWKERLEREKRELASLAGDDYKRAEKFIKDKR---VHPVDAPKGTLRARLLKQMTATESSSKTAVSDLLFNLC-ADEEEFTTRCGFGNAVNTLRLRGMISVP 1284
KL ++LL+D SF E L+E+GC ++++ E Q+ V +G AAA L P L+VLN+ +A+ + ++ VK +FP E +K R + I+D++ + P+DAPK TLR +L+ ++ + K ++L++ LC +D EFTTR G GNA+ L +G+ +P
Sbjct: 337 KLAAISLLMDSDASFGEYLIENGCFGTLLEVFERQVDCTVDNTRLEGS--AAATLLPILIVLNRYSVANRNIQILVKDFVFPRENEK----------------------RNNQLIRDRKKTNMSPLDAPKDTLRGKLIVLLSWVDGYVKRCSAELMWTLCDSDYNEFTTRVGLGNALPLLNAKGLSPIP 501 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig125.2074.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig125.2074.1 >prot_Ecto-sp13_S_contig125.2074.1 ID=prot_Ecto-sp13_S_contig125.2074.1|Name=mRNA_Ecto-sp13_S_contig125.2074.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=362bp MDQEALETYTKAAQEDGDAVCGFRVSLMALKCLNNAVWDQPKGQISFVQLback to top mRNA from alignment at Ecto-sp13_S_contig125:103..5741+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig125.2074.1 ID=mRNA_Ecto-sp13_S_contig125.2074.1|Name=mRNA_Ecto-sp13_S_contig125.2074.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5639bp|location=Sequence derived from alignment at Ecto-sp13_S_contig125:103..5741+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig125:103..5741+ >mRNA_Ecto-sp13_S_contig125.2074.1 ID=mRNA_Ecto-sp13_S_contig125.2074.1|Name=mRNA_Ecto-sp13_S_contig125.2074.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1086bp|location=Sequence derived from alignment at Ecto-sp13_S_contig125:103..5741+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |