mRNA_Ecto-sp13_S_contig12387.1977.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig12387.1977.1
Unique NamemRNA_Ecto-sp13_S_contig12387.1977.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig12387.1977.1 vs. uniprot
Match: D7FZG0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FZG0_ECTSI)

HSP 1 Score: 483 bits (1244), Expect = 6.550e-168
Identity = 242/263 (92.02%), Postives = 245/263 (93.16%), Query Frame = 1
Query:    1 QENSEAERDFGKVDHSQSSPADDSFNPWSEAADAAVWSLQDEGGEGFEYVNLDLNPEKFTGYSGASAARVWGSIYWENLKGYQDNACMEKRILFRLLSGLHSSIMTQIANDYRFDDGTWGPNTKMFVNAVGMHPDRLTNMYFTYVFVLRAIGKARPFLMAYEYDTGNDGDDKLTRQLINELVSTEQEKEAGMVSVDNDMRRDDSVPMCLKGFDEKGLFGVASGDAVFEAGQEDGSMALKQEFMHKFHNISRIMDCVGCEKCKV 789
            QE+SEAERDFGKVDHSQSSPADDSFNPWSEAADAAVWSLQDEGGEGFEYVNLDLNPEKFTG S    A +   I   NLKGYQDNACMEKRILFRLLSGLHSSIMTQIANDYRFDDGTWGPNTKMFVNAVGMHPDRLTNMYFTYVFVLRAIGKARPFLMAYEYDTGND DDK+TRQLINELVS EQEKEAGMVSVDNDMRRDDSVPMCLKGFDEKGLFG  SGD VFEAG EDGSMALKQEFMHKFHNISRIMDCVGCEKCKV
Sbjct:  177 QEHSEAERDFGKVDHSQSSPADDSFNPWSEAADAAVWSLQDEGGEGFEYVNLDLNPEKFTGLSHHQGAWMLERI--NNLKGYQDNACMEKRILFRLLSGLHSSIMTQIANDYRFDDGTWGPNTKMFVNAVGMHPDRLTNMYFTYVFVLRAIGKARPFLMAYEYDTGNDEDDKMTRQLINELVSAEQEKEAGMVSVDNDMRRDDSVPMCLKGFDEKGLFGDVSGDVVFEAGHEDGSMALKQEFMHKFHNISRIMDCVGCEKCKV 437          
BLAST of mRNA_Ecto-sp13_S_contig12387.1977.1 vs. uniprot
Match: A0A835YS22_9STRA (Putative endoplasmic oxidoreductin n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YS22_9STRA)

HSP 1 Score: 251 bits (642), Expect = 8.470e-77
Identity = 139/278 (50.00%), Postives = 181/278 (65.11%), Query Frame = 1
Query:   19 ERDFGKVDHSQSSPADDSFNPWSEAADAA-VWSLQDEGGEGFEYVNLDLNPEKFTGYSGASAARVWGSIYWEN-LKGYQD--NACMEKRILFRLLSGLHSSIMTQIANDYRFDDGTWGPNTKMFVNAVGMHPDRLTNMYFTYVFVLRAIGKARPFLMAYEYDTGNDGDDKLTRQLINELVSTEQEKEA-----GMVSVDNDMRRDD-----SVP--MCLKGFDEKGLFGVASG-----DAVFEAGQEDGSMALKQEFMHKFHNISRIMDCVGCEKCKV 789
            E++ G++D S S P  D FNPW E A  + VW+ Q+E  +   YVNL+LNPE+FTGYSGASA RVW +IY EN  +G++   + C EKR+ FRL+SGL SSI TQIANDYRFD+G +GPN + F  AVG HPDRLTNMYF Y+F+LRA+ KA P L  Y+Y TGN  +D  T QL+  LV  + E        G V++ N           + P  +C+ GF+E G+F V +      DAV+    E+    L+++F+ KFHNISRIMDCVGCEKCK+
Sbjct:  165 EKELGRIDRSHSDPKADYFNPWEEMAHPSNVWTEQEEREDAMAYVNLELNPERFTGYSGASAWRVWKAIYLENCFEGFEGGKSVCREKRVFFRLISGLQSSITTQIANDYRFDNGRYGPNVEFFTRAVGAHPDRLTNMYFAYLFLLRALAKAAPVLKHYDYATGNAREDAHTMQLLQALVDHQSEPSLPQLANGAVTLFNGXXXXXXXXXXAAPHTLCMGGFNETGMFEVEAAQRSPLDAVYARELEE-KRELREQFVAKFHNISRIMDCVGCEKCKM 441          
BLAST of mRNA_Ecto-sp13_S_contig12387.1977.1 vs. uniprot
Match: W7U2W8_9STRA (Endoplasmic oxidoreductin-2 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U2W8_9STRA)

HSP 1 Score: 203 bits (516), Expect = 1.930e-58
Identity = 113/267 (42.32%), Postives = 155/267 (58.05%), Query Frame = 1
Query:   19 ERDFGKVDHSQSSPADDSFNPWSEAADAAVWSLQDEGGEGFEYVNLDLNPEKFTGYSGASAARVWGSIY---WENLKGYQDNA--CMEKRILFRLLSGLHSSIMTQIANDYRFDDGT--WGPNTKMFVNAVGMHPDRLTNMYFTYVFVLRAIGKARPFLMAYEYDTGNDGDDKLTRQLINELVSTEQEKEAGMVSVDNDMRRDDSVPMCLKGFDEKGLF---GVASGDAVFEAGQEDGSMALKQEFMHKFHNISRIMDCVGCEKCKV 789
            E   G VD  ++    D+F  W E  +A VW  Q+E  +G  Y+NL  NPE+FTGY+G SA R W ++Y   +E   G  +    C+EKR+ +RL++GL SSI T +A +Y +D     W PNT +FV  VG HP+R+ N+YFTY+F+LRAI KA P L+ Y+YDTGN  DD+  R  +  LV T                   +   C + FDE G+F   G+  G A   A +E     L+Q+F  +FHNISR+MDCVGCEKC++
Sbjct:  150 EMHLGAVDRKEAMVGVDAFAGWEEGDNARVWIEQEEEDQGMTYINLLRNPERFTGYAGPSARRAWNAVYENCFELSPGELEAGGHCLEKRVFYRLIAGLQSSISTHLALEY-YDKAQDCWFPNTALFVEKVGKHPERIHNLYFTYLFLLRAINKAGPELLLYDYDTGNSEDDECVRSAVQNLVRTSSNTS--------------TADQCHRAFDESGMFQPRGLTDG-AEAAAEEERELHKLRQDFFVRFHNISRVMDCVGCEKCRL 400          
BLAST of mRNA_Ecto-sp13_S_contig12387.1977.1 vs. uniprot
Match: A0A8K1C292_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C292_PYTOL)

HSP 1 Score: 195 bits (496), Expect = 1.560e-55
Identity = 111/270 (41.11%), Postives = 160/270 (59.26%), Query Frame = 1
Query:   19 ERDFGKVDHSQSSPADDSFNPWSEAADAAVWSLQDEGGEGFEYVNLDLNPEKFTGYSGASAARVWGSIYWENL---KGYQDNA----CMEKRILFRLLSGLHSSIMTQIANDYRFDDGTWGPNTKMFVNAVGMHPDRLTNMYFTYVFVLRAIGKARPFLMAYEYDTGNDGDDKLTRQLINELVSTEQEKEAGMVSVDNDMRRDDSVPM----CLKGFDEKGLFGVASGDAVFE--AGQEDGSMALKQEFMHKFHNISRIMDCVGCEKCKV 789
            E +  +VD + ++ A ++FN W+E +   VWS Q+E  +   Y+NL  NPE++TGYSG  A R+W +IY EN       QD      C+E+R+ +RL+SGL +SI T IA  Y+  D  WGPN  +FV+ VG HP+RL N+YF Y+FV+RAIG+ R  L++Y++ TGND DD+  R+++  LV               D +R  S P      L GFDE+ LF V  G   ++     ++    L+ +F  KF N+SRIMDCV CEKC++
Sbjct:  169 ESELSRVDRTNAA-AGENFNEWTEGSSPEVWSNQEEA-DNMMYINLLENPERYTGYSGYQAERIWKAIYQENCFTPAHAQDKELTGMCLEERVYYRLISGLQASINTHIALRYKHGDW-WGPNPSLFVHRVGKHPERLQNLYFVYLFVMRAIGRYRDELLSYDFTTGNDADDQRLREILKLLVV--------------DDKRHSSCPSEQKSVLSGFDERALFRVQRGGMSYDQYVDAKEQKRELELQFREKFQNVSRIMDCVTCEKCRL 421          
BLAST of mRNA_Ecto-sp13_S_contig12387.1977.1 vs. uniprot
Match: A0A7S1CNX9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CNX9_9STRA)

HSP 1 Score: 194 bits (492), Expect = 1.600e-55
Identity = 106/247 (42.91%), Postives = 139/247 (56.28%), Query Frame = 1
Query:  106 VWSLQDEGGEGFEYVNLDLNPEKFTGYSGASAARVWGSIYWEN-LKGYQDNACMEKRILFRLLSGLHSSIMTQIANDYRFDDGTWGPNTKMFVNAVGMHPDRLTNMYFTYVFVLRAIGKARPFLMAYEYDTGNDGDDKLTRQLINELVSTEQEKEAGMVSVDNDMRRDDSVPMCLKGFDEKGLFGVASGDAVFEA-----GQED-------------GSMALKQEFMHKFHNISRIMDCVGCEKCKV 789
             W++QDE   G  YVN+ +NPE+ T Y+GA+  RVWGS+Y EN   G  D  C E+R+  R++SG+  SI + IA  Y   DGT+GPN  +++  +G HPDRL N+YFTY+FV+RAI KA+P L     +TG   DD+ TR+L+  L S E                   VP  L+GFDE  +F V + + V E      G ED                 LK  F  KFHNISRIMDCVGCEKC++
Sbjct:  152 AWTVQDEDSPGMTYVNVAMNPERDTKYTGANTRRVWGSVYKENCFDGPFDGLCFEERVFQRIISGIQGSISSHIAAQYSQGDGTFGPNLDLYLRMIGRHPDRLKNLYFTYLFVMRAIAKAKPILEGLLVNTGVPDDDQRTRELLASLTSQE-------------------VPAVLRGFDESSMFKVKAEELVAECPPVLHGLEDLHDLQHRYVDEAAKKAKLKDSFRAKFHNISRIMDCVGCEKCRL 379          
BLAST of mRNA_Ecto-sp13_S_contig12387.1977.1 vs. uniprot
Match: A0A3R7IKS5_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7IKS5_9STRA)

HSP 1 Score: 194 bits (493), Expect = 2.380e-55
Identity = 113/252 (44.84%), Postives = 153/252 (60.71%), Query Frame = 1
Query:   61 ADDSFNPWSEAADAAVWSLQDEGGEGFEYVNLDLNPEKFTGYSGASAARVWGSIYWENL-----KGYQDNACMEKRILFRLLSGLHSSIMTQIANDYRFDDGTWGPNTKMFVNAVGMHPDRLTNMYFTYVFVLRAIGKARPFLMAYEYDTGNDGDDKLTRQLINELVSTEQEKEAGMVSVDNDMRRDDSVPMCLKGFDEKGLFGV-ASG---DAVFEAGQEDGSMALKQEFMHKFHNISRIMDCVGCEKCKV 789
            A +SFN W E ++A VW+ Q E  E   Y+NL  NPE++TGYSG  A R+W +IY EN      +   D+ C+E+R+ +RL+SGL +SI T IA  YRF +  WG N  +FV  VG H +RL N+YFTY+FV+RAI K R  L AY+Y+TGN  DD+   +++ +L+  E   +A    V      + S    L GFDE  LF V A G   D + +A QE     L+ +F  KF N+SRIMDCV CEKC++
Sbjct:  146 AGESFNEWEEVSNANVWATQGESEEAMAYINLLENPERYTGYSGVQAERIWRAIYDENCFTPPEESAVDSMCLEERVYYRLISGLQASINTHIALTYRFGE-QWGVNPSLFVFRVGKHRERLQNLYFTYLFVMRAISKYRHELFAYDYNTGNVADDQRVNEILRQLL-LEGSDDARSTGVSCPAHAECSS--VLSGFDESALFRVQADGLSLDQLAQAKQEKEQ--LEVQFREKFQNVSRIMDCVTCEKCRL 391          
BLAST of mRNA_Ecto-sp13_S_contig12387.1977.1 vs. uniprot
Match: G4YPK6_PHYSP (Uncharacterized protein n=3 Tax=Phytophthora TaxID=4783 RepID=G4YPK6_PHYSP)

HSP 1 Score: 194 bits (493), Expect = 4.300e-55
Identity = 113/252 (44.84%), Postives = 154/252 (61.11%), Query Frame = 1
Query:   61 ADDSFNPWSEAADAAVWSLQDEGGEGFEYVNLDLNPEKFTGYSGASAARVWGSIYWENL-----KGYQDNACMEKRILFRLLSGLHSSIMTQIANDYRFDDGTWGPNTKMFVNAVGMHPDRLTNMYFTYVFVLRAIGKARPFLMAYEYDTGNDGDDKLTRQLINELVSTEQEKEAGMVSVDNDMRRDDSVPMCLKGFDEKGLFGV-ASG---DAVFEAGQEDGSMALKQEFMHKFHNISRIMDCVGCEKCKV 789
            A +SFN W E ++A VW+ Q E  E   Y+NL  NPE++TGYSG  A R+W SIY EN      +   D  C+E+R+ +RL+SGL +SI T IA  Y+F + +WG N  +FVN VG H +RL N+YF Y+FV+RAI K R  L+AY+Y+TGN  DD   R+++ +L+  E   +A    V      + S    L GFDE  LF V A G   D + +A QE     L+ +F  KF N+SRIM+CV CEKC++
Sbjct:  176 AGESFNEWEEVSNANVWATQGEAEETMTYINLLENPERYTGYSGVQAERIWKSIYEENCFTPPEESKLDGMCLEERVYYRLISGLQASINTHIALTYKFGN-SWGMNPSLFVNRVGKHRERLQNLYFAYLFVMRAISKYRHELLAYDYNTGNAADDLRVREILRQLL-LEGSDDARASGVSCPAYAECSS--VLSGFDESALFRVQADGLSIDQLVQAKQEKEQ--LEVQFREKFQNVSRIMNCVTCEKCRL 421          
BLAST of mRNA_Ecto-sp13_S_contig12387.1977.1 vs. uniprot
Match: W2IL98_PHYPR (Uncharacterized protein n=10 Tax=Phytophthora TaxID=4783 RepID=W2IL98_PHYPR)

HSP 1 Score: 194 bits (492), Expect = 5.350e-55
Identity = 116/266 (43.61%), Postives = 159/266 (59.77%), Query Frame = 1
Query:   19 ERDFGKVDHSQSSPADDSFNPWSEAADAAVWSLQDEGGEGFEYVNLDLNPEKFTGYSGASAARVWGSIYWENL-----KGYQDNACMEKRILFRLLSGLHSSIMTQIANDYRFDDGTWGPNTKMFVNAVGMHPDRLTNMYFTYVFVLRAIGKARPFLMAYEYDTGNDGDDKLTRQLINELVSTEQEKEAGMVSVDNDMRRDDSVPMCLKGFDEKGLFGV-ASG---DAVFEAGQEDGSMALKQEFMHKFHNISRIMDCVGCEKCKV 789
            E    KVD  +++ A ++F  W E + A VW+ Q E  E   Y+NL  NPE++TGYSG  A R+W +IY EN      +   DN C+E+R+ +RL+SGL +SI T IA  Y+F D  WG N  +FV+ VG H +RL N+YF Y+FV+RAI K R  L+AY+Y+TGN  DD   R+++ +L+  E   +A    V      + S    L GFDE  LF V A G   D + +A QE     L+ +F  KF N+SRIMDCV CEKC++
Sbjct:  158 ESTLSKVDR-KNAAAGETFKEWEEVSSANVWATQGEAEEMMTYINLLENPERYTGYSGIQAERIWQAIYKENCFTPSEESVLDNLCLEERVYYRLISGLQASINTHIALTYKFGD-KWGVNPSLFVSRVGKHRERLQNLYFAYLFVMRAISKYRHELLAYDYNTGNAADDLRVREILRQLL-LEGSDDARASGVSCPAYAECSS--VLSGFDESALFRVQADGLTLDQLAQAQQEKEQ--LEVQFREKFQNVSRIMDCVTCEKCRL 416          
BLAST of mRNA_Ecto-sp13_S_contig12387.1977.1 vs. uniprot
Match: A0A5D6YAX0_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YAX0_9STRA)

HSP 1 Score: 194 bits (492), Expect = 8.380e-55
Identity = 110/264 (41.67%), Postives = 156/264 (59.09%), Query Frame = 1
Query:   28 FGKVDHSQSSPADDSFNPWSEAADAAVWSLQDEGGEGFEYVNLDLNPEKFTGYSGASAARVWGSIYWENL----KGYQ---DNACMEKRILFRLLSGLHSSIMTQIANDYRFDDGTWGPNTKMFVNAVGMHPDRLTNMYFTYVFVLRAIGKARPFLMAYEYDTGNDGDDKLTRQLINELVSTEQEKEAGMVSVDNDMRRDDSVPMCLKGFDEKGLFGVASGDAVFEAGQEDGSM---ALKQEFMHKFHNISRIMDCVGCEKCKV 789
              KVD + +  A + F  W E     +WS Q E GE   Y+NL  NPE++TGYSG  A RVW +IY EN      G++   +  C+E+R+ +RL+SGL +SI T IA  Y++ D TW  N  +FVN VG H +RL N+YFTY+FV+RA+G+ R  L+ Y+Y TGN  DD+  R+++ ++V  + E  +   +         S    L GFDE+ LF V  G   + A  ED +    AL+ +F  +F N+SRIMDCV CEKC++
Sbjct:  181 LSKVDRTNA-VAGEGFRGWQEQQSPEIWSNQGEAGETMAYINLLENPERYTGYSGYQAERVWHAIYQENCFTPALGHEQSLEGMCLEERVYYRLISGLQASINTHIALRYKYGD-TWDTNPSLFVNRVGKHRERLENLYFTYLFVMRALGRYREQLLQYDYSTGNTADDQRVREVLRQVVFEDAEATSCPTA---------SRSAVLAGFDEQALFRVPRGQLSY-AEYEDATAQKRALEVQFRARFQNVSRIMDCVTCEKCRL 432          
BLAST of mRNA_Ecto-sp13_S_contig12387.1977.1 vs. uniprot
Match: A0A7S2DCT6_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DCT6_9STRA)

HSP 1 Score: 192 bits (488), Expect = 1.870e-54
Identity = 110/252 (43.65%), Postives = 150/252 (59.52%), Query Frame = 1
Query:   82 WSEAADAAVWSLQDEGGEGFEYVNLDLNPEKFTGYSGASAARVWGSIYWENL--KGYQDNA-CMEKRILFRLLSGLHSSIMTQIANDYRF-----DDGTWGPNTKMFVNAVGMHPDRLTNMYFTYVFVLRAIGKARPFLMAYEYDTGNDGDDKLTRQLINELVSTEQEKEAGMVSVDNDMRRDDSVPMCLKGFDEKGLFGVASGDAVFEAGQED--------GSMALKQEFMHKFHNISRIMDCVGCEKCKV 789
            WSE + + VW  QDE   G  YV+L  NPE++TGYSG  A RVW +I+ EN     + D   C+EKRI FRL+SGL +SI T IA +Y F     + G WGPNT++FV+ VG H DRL N+YFTY+F+LRA+ KA P L A  +DTG+  +D  +R L+  LV  +             +    +  +C +GFDE  LF +   D+  E G  +         ++ L++EF  +F NISRIMDCVGCEKC++
Sbjct:  174 WSEGSSSDVWIDQDEA-SGMVYVDLLENPERYTGYSGPHARRVWQAIHEENCFESDFGDRGQCLEKRIFFRLISGLQASINTHIATNYLFGGAYGEGGHWGPNTQLFVDRVGRHSDRLHNLYFTYLFLLRALAKAAPALEASHFDTGHAEEDSRSRALVRALVRPDHPL----------LDASQAAQVCQRGFDESRLFQM---DSELEEGMTEFEQYMAMRRTLELRKEFQERFRNISRIMDCVGCEKCRL 411          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12387.1977.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FZG0_ECTSI6.550e-16892.02Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YS22_9STRA8.470e-7750.00Putative endoplasmic oxidoreductin n=1 Tax=Tribone... [more]
W7U2W8_9STRA1.930e-5842.32Endoplasmic oxidoreductin-2 n=2 Tax=Monodopsidacea... [more]
A0A8K1C292_PYTOL1.560e-5541.11Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A7S1CNX9_9STRA1.600e-5542.91Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A3R7IKS5_9STRA2.380e-5544.84Uncharacterized protein n=3 Tax=Phytophthora kerno... [more]
G4YPK6_PHYSP4.300e-5544.84Uncharacterized protein n=3 Tax=Phytophthora TaxID... [more]
W2IL98_PHYPR5.350e-5543.61Uncharacterized protein n=10 Tax=Phytophthora TaxI... [more]
A0A5D6YAX0_9STRA8.380e-5541.67Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A7S2DCT6_9STRA1.870e-5443.65Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12387contigEcto-sp13_S_contig12387:27..3460 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score484.2
Seed ortholog evalue3.9e-134
Seed eggNOG ortholog2880.D7FZG0
Preferred nameERO1LB
Model size789
KEGG koko:K10950,ko:K10976
KEGG Pathwayko04141,ko05110,map04141,map05110
Hectar predicted targeting categoryother localisation
GOsGO:0001666,GO:0003674,GO:0003756,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005788,GO:0005789,GO:0006082,GO:0006457,GO:0006458,GO:0006464,GO:0006508,GO:0006518,GO:0006520,GO:0006575,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0006816,GO:0006873,GO:0006874,GO:0006875,GO:0006915,GO:0006950,GO:0006979,GO:0006986,GO:0007154,GO:0007165,GO:0007204,GO:0007275,GO:0007568,GO:0008150,GO:0008152,GO:0008219,GO:0008593,GO:0009266,GO:0009628,GO:0009966,GO:0009987,GO:0010033,GO:0010260,GO:0010467,GO:0010646,GO:0010817,GO:0012501,GO:0012505,GO:0015035,GO:0015036,GO:0016020,GO:0016021,GO:0016043,GO:0016485,GO:0016486,GO:0016491,GO:0016667,GO:0016670,GO:0016853,GO:0016860,GO:0016864,GO:0016972,GO:0019471,GO:0019538,GO:0019725,GO:0019752,GO:0022417,GO:0023051,GO:0023052,GO:0030001,GO:0030003,GO:0030070,GO:0030154,GO:0030176,GO:0030198,GO:0030425,GO:0030968,GO:0031224,GO:0031227,GO:0031974,GO:0031984,GO:0032501,GO:0032502,GO:0032879,GO:0033500,GO:0033554,GO:0034220,GO:0034599,GO:0034620,GO:0034641,GO:0034975,GO:0034976,GO:0035556,GO:0035966,GO:0035967,GO:0036211,GO:0036293,GO:0036294,GO:0036477,GO:0042175,GO:0042221,GO:0042445,GO:0042592,GO:0042593,GO:0042995,GO:0043005,GO:0043062,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043436,GO:0043603,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044281,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044446,GO:0044463,GO:0044464,GO:0045444,GO:0045454,GO:0048513,GO:0048519,GO:0048523,GO:0048583,GO:0048731,GO:0048856,GO:0048869,GO:0048878,GO:0050789,GO:0050794,GO:0050801,GO:0050873,GO:0050896,GO:0051082,GO:0051084,GO:0051085,GO:0051179,GO:0051209,GO:0051234,GO:0051282,GO:0051283,GO:0051480,GO:0051604,GO:0051641,GO:0051649,GO:0051716,GO:0055065,GO:0055074,GO:0055080,GO:0055082,GO:0055085,GO:0055114,GO:0060401,GO:0060402,GO:0061077,GO:0065007,GO:0065008,GO:0070013,GO:0070059,GO:0070482,GO:0070588,GO:0070838,GO:0070887,GO:0071310,GO:0071453,GO:0071456,GO:0071704,GO:0071840,GO:0072503,GO:0072507,GO:0072511,GO:0097190,GO:0097193,GO:0097447,GO:0097458,GO:0097553,GO:0098655,GO:0098660,GO:0098662,GO:0098771,GO:0098827,GO:0120025,GO:0120038,GO:0140096,GO:1901142,GO:1901564,GO:1901605
Exons6
EggNOG free text desc.protein folding in endoplasmic reticulum
EggNOG OGsCOG5061@1,KOG2608@2759
Ec32 ortholog descriptionEndoplasmic reticulum oxidoreductin 1
Ec32 orthologEc-19_003170.1
Cds size789
COG Functional cat.OU
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12387.1977.1prot_Ecto-sp13_S_contig12387.1977.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig12387 27..3460 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462658.691037-CDS-Ecto-sp13_S_contig12387:26..2081681462658.691037-CDS-Ecto-sp13_S_contig12387:26..208Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12387 27..208 +
1681462658.712738-CDS-Ecto-sp13_S_contig12387:789..9531681462658.712738-CDS-Ecto-sp13_S_contig12387:789..953Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12387 790..953 +
1681462658.7209466-CDS-Ecto-sp13_S_contig12387:1637..17681681462658.7209466-CDS-Ecto-sp13_S_contig12387:1637..1768Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12387 1638..1768 +
1681462658.7298014-CDS-Ecto-sp13_S_contig12387:2197..22631681462658.7298014-CDS-Ecto-sp13_S_contig12387:2197..2263Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12387 2198..2263 +
1681462658.737874-CDS-Ecto-sp13_S_contig12387:2841..29911681462658.737874-CDS-Ecto-sp13_S_contig12387:2841..2991Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12387 2842..2991 +
1681462658.7455683-CDS-Ecto-sp13_S_contig12387:3364..34601681462658.7455683-CDS-Ecto-sp13_S_contig12387:3364..3460Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12387 3365..3460 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig12387.1977.1

>prot_Ecto-sp13_S_contig12387.1977.1 ID=prot_Ecto-sp13_S_contig12387.1977.1|Name=mRNA_Ecto-sp13_S_contig12387.1977.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=263bp
QENSEAERDFGKVDHSQSSPADDSFNPWSEAADAAVWSLQDEGGEGFEYV
NLDLNPEKFTGYSGASAARVWGSIYWENLKGYQDNACMEKRILFRLLSGL
HSSIMTQIANDYRFDDGTWGPNTKMFVNAVGMHPDRLTNMYFTYVFVLRA
IGKARPFLMAYEYDTGNDGDDKLTRQLINELVSTEQEKEAGMVSVDNDMR
RDDSVPMCLKGFDEKGLFGVASGDAVFEAGQEDGSMALKQEFMHKFHNIS
RIMDCVGCEKCKV
back to top

mRNA from alignment at Ecto-sp13_S_contig12387:27..3460+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig12387.1977.1 ID=mRNA_Ecto-sp13_S_contig12387.1977.1|Name=mRNA_Ecto-sp13_S_contig12387.1977.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3434bp|location=Sequence derived from alignment at Ecto-sp13_S_contig12387:27..3460+ (Ectocarpus species13 EcNAP12_S_4_19m)
CAGGAGAACTCCGAGGCCGAGAGAGACTTCGGCAAGGTTGACCACAGCCA GAGCTCTCCCGCCGACGACTCGTTCAACCCTTGGTCGGAGGCGGCGGACG CGGCGGTGTGGTCACTGCAAGATGAGGGTGGGGAGGGGTTCGAGTACGTC AACCTCGACCTCAACCCGGAAAAGTTCACAGGGTAAATAACGGAAGTGGA TGGTTGAGGGAGAGGGGAGATTGATGTTTCTTTTGGGGTGGGTGGGGGGG ACGTACTCATGTTTTGCATGCCTTAGTTGTTAGACCAATGACCGGAGGGG GAGGGGTAGTTTTCTCGTGGTCCAGAGGAACTCTCTTCTGTTCGAGTATG CCCCCATGGTAGTTGATGCGCGTACTCCTCGACCAGACCCCGCAAACGTT CAGCGGGCAAGCGACCGATCGGGGGGGAAGTAAATAGGGCAGGAAGGGCA TAAGGGCATACTCGGATGTACTGCTTGCTTGTCGCGAAACTATTGTGTCA GATGGGGCGGAGTCTAAATCGCTGTACTGCGTGCAGTTTCGCCCATGGCT CTCTCTCTCTCTCTCTCTGTTCATACATACACACATACCATGCTAAAAAG AAAGACACACACACACCCCTTGCGGAAACGTGGTGCTTGTCTCGACGTAT TGTGAAGAGCCGTCATCTTCTGTCTCGAAAGGAATGGAAAGGAATGGATG CGCGGCCAGTAGTCCAACGAAGGCACCCCCCTCCTCCCCCTTTTTTTGTT TTGTTTTTCCCAGGTACTCTGGGGCGTCAGCGGCACGGGTGTGGGGGTCC ATCTACTGGGAGAACCTCAAGGGGTACCAGGACAACGCTTGCATGGAGAA GCGCATCCTCTTCCGCCTCCTGAGCGGCCTCCACTCGTCCATCATGACCC AGATCGCCAACGACTACCGCTTCGACGGTAAGAGCTATCTTGACCGTCAG CTGTCAGCCGCTACCTCTGGGTTCGGTTGGGAACTACACTGCCCTGTATC CGGGGTAGCACTATCTGGCGATAAGCTGGCCATAGACCATAGATATTGTT TTTGGCTGGGGAGTGTGAAGGGTTAATCCGAAGACTTGAAACCGCCAACA CTTCAACAGCAGTTAGCTGCAGTAGTCGTTGTCCACCCGAGAAACAGCTG CCATGCTTAGGACCGACTACCCACATACTGCATTGCAAATCGCTGCAGTA TCTTTAGTGTGTTGTACCACTTCGACGCTGAGCCAGCCATGATGAATGCC ACTCCAAAATCAACAACAAAATAACAGCGCTTGTTTCTTCGTGGCTGCCC TGATGTGCACTGTGGTTCTCTCACAAGACAACGTTGTTTTCGTATATTAC CTCCAAGAATTGTTGTTCCTCCCTTTTTTACGCACACCCTCTGCGTATGC ACCCTGGCATGTCAATACACCCAGCTGAGCCTCCCACCCCCCATGTTACA TATTTTCGAACATTACCTGATGTACCAATTCAGACAGCACCTGGAGACCT CCAATACGAAGATGTCCATTAACGCCGTGGGCATGCACGCGGACATGTCA ATACACGCTGCTGAGCCCCTCCCCTCCCCCCCCCCACTTCGCCATGTGTG TACCAATTCAGACGGCACATGGGGACCCAACACGAAGATGTTCGTGAACG CCGTGGGCATGCACCCTGACCGACTGACCAACATGTACTTCACGTACGTG TTCGTGCTCAGGGCGATTGGAAAGGCGCGACCGTTCCTCATGGTACGGGG GACAAAACCGTGACGAGACCTGCGTGCGTTATGTGTGTGATGCCGTATGC GTATTCGTGTTCCGCGTTTCCTCGCTTCTACTCCTCTCCGTTGTTGCTGT CGCTGCTACTGCAACCGCTGCTGCTGCTGCTGCCGCTTCTTCTTTTGCCC GATGACGTCTGCCGTGACTTTGCGAGTCTGCTGGTGTGCCGTGTATTGCG TTGCATGTTCTATCTGTTGGGAGGGTACAGTGGTACAAGTCGGCAAGTCC AGCTGGGGGACCACCGCTCTCTCTCTCTCTCGTGTCGGCTGCTAGCGAAT CTATGCCTGAGCTCACCCTCTCTCTCTCTCCGGCTTGGTTATTCCGTGCT TCTGCTCGTGGAGGCGTCTTTCTGTGTCTTCCCTCTCTTATTTTTTGTTG TTTTGTTTCGTTTCTATACAGGCGTACGAGTACGACACCGGAAATGACGG GGACGACAAGCTCACGCGTCAGCTAATCAACGAGCTGGTGAGTCGACACC CTCTGTTTGCTGCTCCCGCAGACTACGCATATCTTCTTCGTCTCTTTCTC AAGCGGTATATCTCGCTGTTTCGTACGTATGCCAGCACTCTTCTGTGTGT TTCGCTGATCCGGCACCCCATCAGCCGGCCGGCGAGTGGCAACATTGTGC ACTCCGTTTCGATCATGTTTGGAACGAGAAACAGTCAACTTCGAAATCGG ATTTTATGGTCAACCTACTTTTGGTTGTTGTTGCGGATTAAGTTCGAAAG CACGGGAAATGCAGGCGTTTTTCCCTCCGGTGTTATTTTTTGTGTGTGTC TTTTTTGTTGGCATCGTCCGCCGTAACCGACTGACCAATGAAAAGACATC AGTCTCAGTGCGGTGTGTGTGTGCGTGTGTGTTGGTGTGTGTCTTCTGTC CTGCGTTCCCATCTTGTTCGATGTCGTCGGGACTCTTGTCGTGTCCGTGT TGGAAGTCGACTTACCTACTCTCGAGCTCTGATTCCCTGACCGGCTGTGT GCCCTCCTCATCAAAATTGTTCTGCCTCGTGTATGGTGTCTGTCGTGCTG TTGTTGTCGTATCAGGTGAGCACCGAGCAGGAGAAAGAGGCAGGCATGGT TAGCGTGGACAACGACATGCGGCGAGACGACTCGGTTCCGATGTGCCTCA AGGGTTTCGACGAGAAGGGGCTGTTCGGCGTTGCGAGTGGAGACGCCGTG TTCGAGGCTGGCCAGGTGGGTGAATTTGGCTGATGCTGCTGTTGTTGTTG TTGTTGTTGTTGTTGTTGTTGTCGTTGTTGTTGTTGTTGTTGTTGTTGTT GTTTTAAAAATTACTTGCCTTTCGCAGTTTCAAGGGCTGGTAAATGGTGG TGTTGTGTGTGTCCCCTATAAAACAACCGTTTGCGACGAGCAGCCCGTAT CCTCCTCCCCCTACCTCTAGAGATGGATCGCATGAAAAGGTGGCACCGGA CGATGAACTGGCATGCAACACCTCCCTGTCTGTCCTTTTTCCTGTGCGTT CTCTCGCCAACTATTTTCGCTCTTTCCTCCACTGGACACCCTGTGTTACC ACTGCTGTGTGAATTCCTGTTGGTATACCATCTTCCAGGAGGACGGCTCT ATGGCCCTCAAGCAAGAGTTCATGCACAAGTTCCACAACATCTCACGCAT CATGGACTGCGTCGGTTGCGAGAAGTGCAAGGTT
back to top

Coding sequence (CDS) from alignment at Ecto-sp13_S_contig12387:27..3460+

>mRNA_Ecto-sp13_S_contig12387.1977.1 ID=mRNA_Ecto-sp13_S_contig12387.1977.1|Name=mRNA_Ecto-sp13_S_contig12387.1977.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=789bp|location=Sequence derived from alignment at Ecto-sp13_S_contig12387:27..3460+ (Ectocarpus species13 EcNAP12_S_4_19m)
CAGGAGAACTCCGAGGCCGAGAGAGACTTCGGCAAGGTTGACCACAGCCA
GAGCTCTCCCGCCGACGACTCGTTCAACCCTTGGTCGGAGGCGGCGGACG
CGGCGGTGTGGTCACTGCAAGATGAGGGTGGGGAGGGGTTCGAGTACGTC
AACCTCGACCTCAACCCGGAAAAGTTCACAGGGTACTCTGGGGCGTCAGC
GGCACGGGTGTGGGGGTCCATCTACTGGGAGAACCTCAAGGGGTACCAGG
ACAACGCTTGCATGGAGAAGCGCATCCTCTTCCGCCTCCTGAGCGGCCTC
CACTCGTCCATCATGACCCAGATCGCCAACGACTACCGCTTCGACGACGG
CACATGGGGACCCAACACGAAGATGTTCGTGAACGCCGTGGGCATGCACC
CTGACCGACTGACCAACATGTACTTCACGTACGTGTTCGTGCTCAGGGCG
ATTGGAAAGGCGCGACCGTTCCTCATGGCGTACGAGTACGACACCGGAAA
TGACGGGGACGACAAGCTCACGCGTCAGCTAATCAACGAGCTGGTGAGCA
CCGAGCAGGAGAAAGAGGCAGGCATGGTTAGCGTGGACAACGACATGCGG
CGAGACGACTCGGTTCCGATGTGCCTCAAGGGTTTCGACGAGAAGGGGCT
GTTCGGCGTTGCGAGTGGAGACGCCGTGTTCGAGGCTGGCCAGGAGGACG
GCTCTATGGCCCTCAAGCAAGAGTTCATGCACAAGTTCCACAACATCTCA
CGCATCATGGACTGCGTCGGTTGCGAGAAGTGCAAGGTT
back to top