mRNA_Ecto-sp13_S_contig12307.1935.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig12307.1935.1 vs. uniprot
Match: A0A6H5KAP4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAP4_9PHAE) HSP 1 Score: 328 bits (842), Expect = 6.700e-105 Identity = 215/239 (89.96%), Postives = 220/239 (92.05%), Query Frame = -1
Query: 316 SALSLFQPQESMVAPSAARRGFYVVPRPGVDGARADFLKGKTIVMTGVFPEIGGGAGLNQGKDRLRSMCESFGARVTSAISGKTDMLIVGKEPGASKVGKANASPKCQLVSLADLTMSIQGEQQLESAPPPEIEAFSEGYSGNGLHMRLGSGRGKAAAKRLLADVKKPQAAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKKSAAAKKTAAGRKKGPAPKRNK-KTTTDIAPIS 1029
SA+S FQPQESMVAPSAARR FYVVPRPGV+GARADFLKGKTIVMTGVFPEIGGGAGLNQGKDRLRSMCESFGARVTSAISGKTDMLIVGKEPGASKVGKANASPKCQLVSLADLTMSIQGEQ+LESAPPPEIEAFSEG+SGNGLHMRLGSGRGKA AK LLADVKK +A XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX KSAA KGPAPKRNK KTTTDIAPIS
Sbjct: 361 SAVSRFQPQESMVAPSAARRRFYVVPRPGVNGARADFLKGKTIVMTGVFPEIGGGAGLNQGKDRLRSMCESFGARVTSAISGKTDMLIVGKEPGASKVGKANASPKCQLVSLADLTMSIQGEQKLESAPPPEIEAFSEGFSGNGLHMRLGSGRGKATAKPLLADVKKRKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKSAAXXXXXXXXXKGPAPKRNKTKTTTDIAPIS 599
BLAST of mRNA_Ecto-sp13_S_contig12307.1935.1 vs. uniprot
Match: A0A507FPK0_9FUNG (Uncharacterized protein n=1 Tax=Chytriomyces confervae TaxID=246404 RepID=A0A507FPK0_9FUNG) HSP 1 Score: 173 bits (439), Expect = 3.360e-45 Identity = 81/129 (62.79%), Postives = 103/129 (79.84%), Query Frame = -1
Query: 589 RRGFYVVPRPGVDGARADFLKGKTIVMTGVFPEIGGGAGLNQGKDRLRSMCESFGARVTSAISGKTDMLIVGKEPGASKVGKANASPKCQLVSLADLTMSIQGEQQLESAPPPEIEAFSEGYSGNGLHM 975
+ F+V PRPGVDG +DFL GKTIV+TG+FPE+GGG GLN GKDRL++MCESFGARVTSA+SGKT++LIVG+EPG SKV KA ++ KCQ++ L DL I+G+Q L PPP IE++S GY GN + +
Sbjct: 346 KSNFFVAPRPGVDGP-SDFLAGKTIVLTGMFPEMGGGCGLNMGKDRLKAMCESFGARVTSAVSGKTNLLIVGQEPGQSKVAKAASTGKCQIIGLQDLVKCIEGQQSLGCTPPPMIESYSTGYYGNSIGL 473
BLAST of mRNA_Ecto-sp13_S_contig12307.1935.1 vs. uniprot
Match: A0A1Y2C5I7_9FUNG (Uncharacterized protein (Fragment) n=1 Tax=Rhizoclosmatium globosum TaxID=329046 RepID=A0A1Y2C5I7_9FUNG) HSP 1 Score: 149 bits (377), Expect = 1.860e-37 Identity = 75/130 (57.69%), Postives = 96/130 (73.85%), Query Frame = -1
Query: 589 YVVPRPGVDGARADFLKGKTIVMTGVFPEIGGGAGLNQGKDRLRSMCESFGARVTSAISGKTDMLIVGKEPGASKVGKANASPKCQLVSLADLTMSIQGEQQLE-----SAPPPEIEAFSEGYSGNGLHM 963
+++PRPG++GA + L G TIV+TG+FPEIGGG GLN GKDRLR +CESFGA+V +A+SGKT +LIVGKEPG SKV KA + C+L+S+ DL I+G + LE S P+IE FS GY+GNG M
Sbjct: 328 FIIPRPGINGADPNALHGHTIVLTGLFPEIGGGTGLNLGKDRLRDICESFGAKVRAAVSGKTTLLIVGKEPGMSKVSKARETG-CRLISVKDLVAGIEGRKPLEIGAGDSDDEPQIERFSVGYNGNGRAM 456
BLAST of mRNA_Ecto-sp13_S_contig12307.1935.1 vs. uniprot
Match: A0A7R9VR65_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VR65_9STRA) HSP 1 Score: 131 bits (329), Expect = 1.220e-33 Identity = 65/130 (50.00%), Postives = 87/130 (66.92%), Query Frame = -1
Query: 610 VAPSAARRGFYVVPRPGVDGARADFLKGKTIVMTGVFPEIGGGAGLNQGKDRLRSMCESFGARVTSAISGKTDMLIVGKEPGASKVGKANAS--PKCQLVSLADLTMSIQGEQQLESAPPPEIEAFSEGY 993
V P A++ + +PRPGV+GA L GK V+TGVFPE+GGG+GL+ GKDR +SM ESFG +VT ++SGKTD ++VGK+PG SKV KA++ P L+SL L + + + S PP I FS GY
Sbjct: 26 VVPHEAKKAKFQIPRPGVNGAAGGVLDGKRFVLTGVFPEVGGGSGLSLGKDRAKSMIESFGGKVTGSVSGKTDYVLVGKDPGRSKVSKADSKGIPLINLISLQRLLLGQSTLEDVASEAPPRITNFSAGY 155
BLAST of mRNA_Ecto-sp13_S_contig12307.1935.1 vs. uniprot
Match: A0A835XKQ1_9CHLO (Uncharacterized protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835XKQ1_9CHLO) HSP 1 Score: 139 bits (350), Expect = 2.110e-33 Identity = 76/153 (49.67%), Postives = 104/153 (67.97%), Query Frame = -1
Query: 580 ALSLFQPQESMVAPSAARRG-FYVVPRPGVDGAR-ADFLKGKTIVMTGVFPEIGGGAGLNQGKDRLRSMCESFGARVTSAISGKTDMLIVGKEPGASKVGKANASPKCQLVSLADLTMSIQGEQ--QLESAPPPEIEAFSEGYSGNGLHMRLG 1026
A+ P +++V S G ++VPRPGV A+ A KG+T V+TG+FPE+GGGAGL+ GKDR R++ ESFG RVT ++SGKT+ L+VG+EPGASKVG+A A +LV + L ++G LE+AP P I +FS GY+GN + RLG
Sbjct: 293 AVGALAPSQALVPVSTGGAGRSFIVPRPGVGNAQGASHWKGRTFVLTGIFPELGGGAGLDLGKDRCRALIESFGGRVTGSVSGKTNFLVVGQEPGASKVGQARARG-VKLVDVMALKAELEGAPGASLEAAPAPVIGSFSAGYNGNSVAYRLG 444
BLAST of mRNA_Ecto-sp13_S_contig12307.1935.1 vs. uniprot
Match: A0A8J2SAB5_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SAB5_9STRA) HSP 1 Score: 139 bits (349), Expect = 1.150e-32 Identity = 75/170 (44.12%), Postives = 106/170 (62.35%), Query Frame = -1
Query: 538 SLFQPQESMVAPSAARR--GFYVVPRPGVDGARADFLKGKTIVMTGVFPEIGGGAGLNQGKDRLRSMCESFGARVTSAISGKTDMLIVGKEPGASKVGKANASPKCQLVSLADLTMSIQGEQQLESAPPPEIEAFSEGYSGNGL-------HMRLGSGRGKAAAKRLLAD 1020
+L P P A +R G +V+P+PG+ G + G T V TG+FPE+GGG+GLN GKDR+++M ++FG RVT ++SGKT++LIVGK+PG SKV KA A+PK L+S+ DL I+ L ++ P +I FS G+ GNGL +R SG +A + L D
Sbjct: 266 ALALPDAPGAGPIAPKRPGGAFVIPKPGISGVEG-CMAGLTCVSTGIFPEVGGGSGLNLGKDRVKAMVQAFGGRVTGSVSGKTNILIVGKQPGMSKVSKARANPKITLMSIHDLKTGIENGDVLAASQPVQITEFSSGFRGNGLALLASEEELREASGMDQAPSVPALPD 434
BLAST of mRNA_Ecto-sp13_S_contig12307.1935.1 vs. uniprot
Match: B5YLR9_THAPS (Predicted protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B5YLR9_THAPS) HSP 1 Score: 134 bits (338), Expect = 2.170e-31 Identity = 68/135 (50.37%), Postives = 89/135 (65.93%), Query Frame = -1
Query: 595 VAPSAARRGFYVVPRPGVDGARADFLKGKTIVMTGVFPEIGGGAGLNQGKDRLRSMCESFGARVTSAISGKTDMLIVGKEPGASKVGKANAS--PKCQLVSLADLTMSIQGEQQLESAPPPEIEAFSEGYSGNGL 993
VA S+ R + +PRPG DG A L GK +V+TG FPE+GGG GLN GKDR++ M ESFG +VT ++SGKTD LIVG++PGASKVGKA+ P ++ L L + + + + PPP I +S GY NGL
Sbjct: 512 VAASSGTRERFNIPRPGADGI-AGILNGKRVVLTGTFPEVGGGTGLNAGKDRMKEMIESFGGKVTGSVSGKTDYLIVGRDPGASKVGKAHQRGLPLMNILQLQHLLIGQTRLEDVATQPPPRITNYSSGYGNNGL 645
BLAST of mRNA_Ecto-sp13_S_contig12307.1935.1 vs. uniprot
Match: A0A5B8MUC9_9CHLO (Hypothetical protein n=1 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MUC9_9CHLO) HSP 1 Score: 134 bits (337), Expect = 2.870e-31 Identity = 68/125 (54.40%), Postives = 84/125 (67.20%), Query Frame = -1
Query: 598 YVVPRPGVDGARADFLKGKTIVMTGVFPEIGGGAGLNQGKDRLRSMCESFGARVTSAISGKTDMLIVGKEPGASKVGKANASPKCQLVSLADLTMSIQG---EQQLESAPPPEIEAFSEGYSGNG 963
+V+P+PGV A+ L GKT V+TGVFPE+GGG+GL+ GKDR++ M SFG RVTSAISGKTD+L+VGK+PG SKV K +C L+SL D I Q +E A P IE FS GY G
Sbjct: 349 FVLPKPGVGNAKPGCLGGKTCVLTGVFPEVGGGSGLSLGKDRVKGMIMSFGGRVTSAISGKTDILVVGKDPGMSKVSKGRNQNRCTLLSLKDFCEGINNGTVSQTIEQAKPMVIETFSMGYKARG 473
BLAST of mRNA_Ecto-sp13_S_contig12307.1935.1 vs. uniprot
Match: A0A0L0FSJ2_9EUKA (Uncharacterized protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FSJ2_9EUKA) HSP 1 Score: 134 bits (336), Expect = 4.000e-31 Identity = 66/126 (52.38%), Postives = 88/126 (69.84%), Query Frame = -1
Query: 589 FYVVPRPGVDGARADFLKGKTIVMTGVFPEIGGGAGLNQGKDRLRSMCESFGARVTSAISGKTDMLIVGKEPGASKVGKANASPKCQLVSLADLTMSIQGEQQLESAPPPEIEAFSEGYSGNGLHM 966
++V PRPG DGA + L GKT+V+TG+FPE+GGG GLN GK++++ + FG RVTS++SGKTD+L+VGKEPG SKV KA ++V L DL I+G L+ P +IE FS GY GN L +
Sbjct: 343 YFVAPRPGKDGAIDNILAGKTVVVTGLFPELGGGTGLNLGKEKMKKLITDFGGRVTSSLSGKTDILVVGKEPGFSKVTKARKMTNVKMVRLPDLKDMIEGGD-LDDVPDVKIENFSGGYWGNSLAL 467
BLAST of mRNA_Ecto-sp13_S_contig12307.1935.1 vs. uniprot
Match: A0A7S0SLC0_9CHLO (Hypothetical protein n=1 Tax=Mantoniella antarctica TaxID=81844 RepID=A0A7S0SLC0_9CHLO) HSP 1 Score: 130 bits (326), Expect = 5.980e-31 Identity = 70/160 (43.75%), Postives = 98/160 (61.25%), Query Frame = -1
Query: 541 VAPSAARRGFYVVPRPGVDGARADFLKGKTIVMTGVFPEIGGGAGLNQGKDRLRSMCESFGARVTSAISGKTDMLIVGKEPGASKVGKANASPKCQLVSLADLTMSIQGEQQLESAPPPE---------IEAFSEGYSGNGLHMRLGSGRGKAAAKRLLA 993
+ P+ + +V PRPG A A L GKT+V+TG+FPE+GGGAGL+ GK + R++ ESFG RVTSA+SGKTD+L+VGKEPG SKV +A + P C L++L+ L+ + + L + I +FS GY+ G R G+G A+ LA
Sbjct: 168 LVPAMGKGSLFVAPRPGQGLAVAGCLSGKTVVLTGIFPELGGGAGLDLGKAKARALVESFGGRVTSAVSGKTDVLLVGKEPGMSKVTQARSKPGCILMNLSQLSGELTAGRALPGGGSADAGALTSEVNIASFSAGYAHGGGANRFGNGLAAKASTEALA 327 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12307.1935.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig12307.1935.1 >prot_Ecto-sp13_S_contig12307.1935.1 ID=prot_Ecto-sp13_S_contig12307.1935.1|Name=mRNA_Ecto-sp13_S_contig12307.1935.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=343bp TDTNSCLPPSLPDPEAKKHDASSLELFHRAPPCQRGWRRSNLQPQETHLSback to top mRNA from alignment at Ecto-sp13_S_contig12307:1624..2652- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig12307.1935.1 ID=mRNA_Ecto-sp13_S_contig12307.1935.1|Name=mRNA_Ecto-sp13_S_contig12307.1935.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1029bp|location=Sequence derived from alignment at Ecto-sp13_S_contig12307:1624..2652- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig12307:1624..2652- >mRNA_Ecto-sp13_S_contig12307.1935.1 ID=mRNA_Ecto-sp13_S_contig12307.1935.1|Name=mRNA_Ecto-sp13_S_contig12307.1935.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1029bp|location=Sequence derived from alignment at Ecto-sp13_S_contig12307:1624..2652- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |