mRNA_Ecto-sp13_S_contig12245.1889.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig12245.1889.1 vs. uniprot
Match: Q8QNA9_ESV1K (EsV-1-178 n=3 Tax=root TaxID=1 RepID=Q8QNA9_ESV1K) HSP 1 Score: 1280 bits (3313), Expect = 0.000e+0 Identity = 646/693 (93.22%), Postives = 665/693 (95.96%), Query Frame = 1
Query: 1 MEVDTENPDPRTKKRCTRKNGVEQSLRAEGDEESGSTRQSCICLDLERTLVKSVMPKYIRDRLERMSRYTGSFRYIVGLFSNYVVIRRLEQGLQPPEVKKVFYDRCWAAINIRISGKNTRNDFSDLLDEFIDQSGFDTSLFHPKVPCRLQETVTREMEVSSKNSIVVHLEAKIKGFLRFRLMNDSQLAFQHLPAKDRSRIIVSLSNDCLEREMREDLDPGYVPHVLQVRDLLAQVYSSEPDVPVLKILKKKPHLFLELISMISRVAEEASDNNRALREEIKTRSDEEKVRKAFYISERIKRGLVDRPKMCTVLPVWKLAPCFPYYSSSVVGSIFHKEGHDFSSVSRFISEHFDLRRVNRKGYKPSGFRLDGYQVQVTFMALVSKKPHVPGTTDLAKSGYQIAKKVVYLETQERGLFVLSQARKDTRKIVADRVHTYNLTVVDPGCASVVSVRSCTLKFCRCVGSVREKSTDWEMKGTEYSVKSGRTMLEGREKKRRSNDEYGRCFPTFSAVKKKTARKSSFLAYCRVAAETFKVMFAEKMKRARKRSRFHSSRLVQKTVDKLASNIAACPSNRKNIVLFGNGSFRAMKGHASAPRKKLVRAICSRVNAGMLDEFRTSKMCPGGCGGEMTDVQGGQRVRQCTTVCVGVENPCPLFENGVAFRCDRDASATLNFCLAGNCGLVRKLWPTHLLRGQ 2079
MEVDTE+P+PRTKKRCTRK+GVEQSL AEGDEES STR+SCICLDLERTLVKSV+PKYIRDRLERMSRYTGSFRYIVGLFSNYVVIRRLEQGLQPPEVKKVFYDRCWAAIN RISGKNTRNDFSDLLDEFIDQ+GFDTSLF P+VP RLQETVTREMEVS+KNSIVVHLEAKIKGFLRFRLMNDSQLAFQHLPAKDRSRII+SLSNDCLEREMR DLDPGYVPHVLQVRDLLAQVYS+EPDV VLK+LKKKPHLFLELISMIS VAEEASDNNR LREE KTRSDEEKVRKAFY+SERIKRGLVDRPKMCTVLPVWKLAPCFPYYSSSVVGS FHKEGHDFSSVSRFISEHFDL RVNRKGYKPSGFR DGYQVQVTFM LVSKKP VPGT DLAKSGYQIAKKVV LETQERGLFVLSQARKD+RKIVADR+H YNLTVVDPGCASVVSVRSC L+FCRCVGSVREKSTDWEMKGTEYS KSGRTMLEGREKKRRSNDEYGRCFP FSAVKKKTARKSSF+AYCRVAAETFKVMFAEKMKRARKRSRFHSSRLVQKTVDKLAS++AACPS+RKNIVLFGNGSFRA KGHASAPRKKLVRAICSRVN GMLDEFRTSKMCPGGCGGEMTDVQGGQRVRQCTTV VGVENPCPLFEN VAFR DRDASATLNFCLAG CGLVRK WPTHLLRGQ
Sbjct: 1 MEVDTESPEPRTKKRCTRKSGVEQSLHAEGDEESSSTRRSCICLDLERTLVKSVIPKYIRDRLERMSRYTGSFRYIVGLFSNYVVIRRLEQGLQPPEVKKVFYDRCWAAINTRISGKNTRNDFSDLLDEFIDQTGFDTSLFPPRVPSRLQETVTREMEVSAKNSIVVHLEAKIKGFLRFRLMNDSQLAFQHLPAKDRSRIIISLSNDCLEREMRGDLDPGYVPHVLQVRDLLAQVYSTEPDVSVLKVLKKKPHLFLELISMISNVAEEASDNNRDLREETKTRSDEEKVRKAFYMSERIKRGLVDRPKMCTVLPVWKLAPCFPYYSSSVVGSTFHKEGHDFSSVSRFISEHFDLGRVNRKGYKPSGFRSDGYQVQVTFMTLVSKKPLVPGTKDLAKSGYQIAKKVVSLETQERGLFVLSQARKDSRKIVADRLHAYNLTVVDPGCASVVSVRSCPLEFCRCVGSVREKSTDWEMKGTEYSAKSGRTMLEGREKKRRSNDEYGRCFPRFSAVKKKTARKSSFVAYCRVAAETFKVMFAEKMKRARKRSRFHSSRLVQKTVDKLASSMAACPSDRKNIVLFGNGSFRAKKGHASAPRKKLVRAICSRVNVGMLDEFRTSKMCPGGCGGEMTDVQGGQRVRQCTTVSVGVENPCPLFENAVAFRYDRDASATLNFCLAGYCGLVRKSWPTHLLRGQ 693
BLAST of mRNA_Ecto-sp13_S_contig12245.1889.1 vs. uniprot
Match: A0A6H5L4M4_9PHAE (Resolvase/invertase-type recombinase catalytic domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4M4_9PHAE) HSP 1 Score: 1108 bits (2867), Expect = 0.000e+0 Identity = 560/598 (93.65%), Postives = 573/598 (95.82%), Query Frame = 1
Query: 250 VVIRRLEQGLQPPEVKKVFYDRCWAAINIRISGKNTRNDFSDLLDEFIDQSGFDTSLFHPKVPCRLQETVTREMEVSSKNSIVVHLEAKIKGFLRFRLMNDSQLAFQHLPAKDRSRIIVSLSNDCLEREMREDLDPGYVPHVLQVRDLLAQVYSSEPDVPVLKILKKKPHLFLELISMISRVAEEASDNNRALREEIKTRSDEEKVRKAFYISERIKRGLVDRPKMCTVLPVWKLAPCFPYYSSSVVGSIFHKEGHDFSSVSRFISEHFDLRRVNRKGYKPSGFRLDGYQVQVTFMALVSKKPHVPGTTDLAKSGYQIAKKVVYLETQERGLFVLSQARKDTRKIVADRVHTYNLTVVDPGCASVVSVRSCTLKFCRCVGSVREKSTDWEMKGTEYSVKSGRTMLEGREKKRRSNDEYGRCFPTFSAVKKKTARKSSFLAYCRVAAETFKVMFAEKMKRARKRSRFHSSRLVQKTVDKLASNIAACPSNRKNIVLFGNGSFRAMKGHASAPRKKLVRAICSRVNAGMLDEFRTSKMCPGGCGGEMTDVQGGQRVRQCTTVCVGVENPCPLFENGVAFRCDRDASATLNFCLAGNCGLV 2043
V ++R+ QGLQPPEVKKVFYDRCWAAINIRISGKNTRNDFSDLLDE IDQSGFDTSLF PKVPCRLQETVTRE EVS+KNSIVVHLEAKIKGFLRFRLMNDSQLAFQHLPAKDRSRIIVSLSNDCLEREMR DLDPGYVPHVLQVRD LAQVY++EPDVPVLKILKKK HLF+ELISMIS VAEEASDNNRALREE KTRSDEEKVRKAFY+SERIKRGLVDRPK CTVLPVWKLAPCFP+YSSSVVGSIFHKEGHDFSSVSRFISEHFDLRRVNRKGYKPSGFR DGYQVQVTFMALVSKKPHVPGTTDLAKSGYQIAKKVV LETQERGLFVLSQARKD+RKIVADRVH NLTVVDPGCASVVSVRSC L+FCRC +STDWEMKGTEYSVKSGRTMLEGREKKRRSNDEYGRCFP FSAVKKKTARKSSFLAYCRVAAETFKVMFAEKMKRARKRSRFHSSRLVQKTVDKLASNIAACPS+RKNIVLFGNGSFRAMKGHASAPRKKLVRAICSRVN GMLDEFRTSKMCPGGCGGEMTDVQGGQRVRQCTTVCVGVENPCPLFENGVAFRCDRDASATLNFCLAG CGLV
Sbjct: 711 VQVQRVLQGLQPPEVKKVFYDRCWAAINIRISGKNTRNDFSDLLDEIIDQSGFDTSLFPPKVPCRLQETVTREKEVSAKNSIVVHLEAKIKGFLRFRLMNDSQLAFQHLPAKDRSRIIVSLSNDCLEREMRGDLDPGYVPHVLQVRDPLAQVYATEPDVPVLKILKKKTHLFVELISMISNVAEEASDNNRALREETKTRSDEEKVRKAFYMSERIKRGLVDRPKTCTVLPVWKLAPCFPHYSSSVVGSIFHKEGHDFSSVSRFISEHFDLRRVNRKGYKPSGFRSDGYQVQVTFMALVSKKPHVPGTTDLAKSGYQIAKKVVSLETQERGLFVLSQARKDSRKIVADRVHANNLTVVDPGCASVVSVRSCPLEFCRCCRERSRESTDWEMKGTEYSVKSGRTMLEGREKKRRSNDEYGRCFPRFSAVKKKTARKSSFLAYCRVAAETFKVMFAEKMKRARKRSRFHSSRLVQKTVDKLASNIAACPSDRKNIVLFGNGSFRAMKGHASAPRKKLVRAICSRVNVGMLDEFRTSKMCPGGCGGEMTDVQGGQRVRQCTTVCVGVENPCPLFENGVAFRCDRDASATLNFCLAGYCGLV 1308
BLAST of mRNA_Ecto-sp13_S_contig12245.1889.1 vs. uniprot
Match: A0A6H5JVT4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVT4_9PHAE) HSP 1 Score: 1044 bits (2700), Expect = 0.000e+0 Identity = 528/552 (95.65%), Postives = 539/552 (97.64%), Query Frame = 1
Query: 259 RRLEQGLQPPEVKKVFYDRCWAAINIRISGKNTRNDFSDLLDEFIDQSGFDTSLFHPKVPCRLQETVTREMEVSSKNSIVVHLEAKIKGFLRFRLMNDSQLAFQHLPAKDRSRIIVSLSNDCLEREMREDLDPGYVPHVLQVRDLLAQVYSSEPDVPVLKILKKKPHLFLELISMISRVAEEASDNNRALREEIKTRSDEEKVRKAFYISERIKRGLVDRPKMCTVLPVWKLAPCFPYYSSSVVGSIFHKEGHDFSSVSRFISEHFDLRRVNRKGYKPSGFRLDGYQVQVTFMALVSKKPHVPGTTDLAKSGYQIAKKVVYLETQERGLFVLSQARKDTRKIVADRVHTYNLTVVDPGCASVVSVRSCTLKFCRCVGSVREKSTDWEMKGTEYSVKSGRTMLEGREKKRRSNDEYGRCFPTFSAVKKKTARKSSFLAYCRVAAETFKVMFAEKMKRARKRSRFHSSRLVQKTVDKLASNIAACPSNRKNIVLFGNGSFRAMKGHASAPRKKLVRAICSRVNAGMLDEFRTSKMCPGGCGGEMTDVQGGQRVR 1914
++ ++GLQPPEVKKVFYDRCWAAINIRISGKNTRNDFSDLLDEFIDQSGFDTSLF PKVPCRLQETVTREMEVS+KNSIVVHLEAKIKGFLRFRLMNDSQLAFQH PAKDRSR+IVSLSNDCLEREMREDLDPGYVPHVLQVRDLLAQVYS+EPDVPVLKILKKKPHLFLELISMISRVAEEASDNNRALREE KTRSDEEKVRKAFYISERIKRGLVDRPKMCTVLPVWKLAPCFPYYSSSVVGSIFHKEGHDFSSVSRFISEHFDLRRVNRKGYKPSGFR DGYQVQVTFMALVSKKPHVPGTTDLAKSGYQIAKKVV LETQERGLFVLSQARKD+RKIVADRVH YNLTVVDPGCASVVSVRSC L+FCRCVGSVREKSTDWEMKGTEYSVKSGRTMLEGREKKRRSNDEYGRCFP FSAVKKKTARKSSFLAYCRVAAETFKVMFAEKMKRARKRSRFHSSRLVQKTVDKLASNIAACPS+RKNIVLFGNGSFRAMKGHASAPRKKLVRAICSRVN GMLDEFRTSKMCPGGCGGEMTDVQG + R
Sbjct: 926 KKEKKGLQPPEVKKVFYDRCWAAINIRISGKNTRNDFSDLLDEFIDQSGFDTSLFPPKVPCRLQETVTREMEVSAKNSIVVHLEAKIKGFLRFRLMNDSQLAFQHFPAKDRSRVIVSLSNDCLEREMREDLDPGYVPHVLQVRDLLAQVYSTEPDVPVLKILKKKPHLFLELISMISRVAEEASDNNRALREETKTRSDEEKVRKAFYISERIKRGLVDRPKMCTVLPVWKLAPCFPYYSSSVVGSIFHKEGHDFSSVSRFISEHFDLRRVNRKGYKPSGFRSDGYQVQVTFMALVSKKPHVPGTTDLAKSGYQIAKKVVSLETQERGLFVLSQARKDSRKIVADRVHAYNLTVVDPGCASVVSVRSCPLEFCRCVGSVREKSTDWEMKGTEYSVKSGRTMLEGREKKRRSNDEYGRCFPRFSAVKKKTARKSSFLAYCRVAAETFKVMFAEKMKRARKRSRFHSSRLVQKTVDKLASNIAACPSDRKNIVLFGNGSFRAMKGHASAPRKKLVRAICSRVNVGMLDEFRTSKMCPGGCGGEMTDVQGDCKAR 1477
BLAST of mRNA_Ecto-sp13_S_contig12245.1889.1 vs. uniprot
Match: A0A6H5KSF5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSF5_9PHAE) HSP 1 Score: 495 bits (1275), Expect = 1.540e-165 Identity = 310/611 (50.74%), Postives = 335/611 (54.83%), Query Frame = 1
Query: 196 MSRYTGSFRYIVGLFSNYVVIRRLEQGLQPPEVKKVFYDRCWAAINIRISGKNTRNDFSDLLDEFIDQSGFDTSLFHPKVPCRLQETVTREMEVSSKNSIVVHLEAKIKGFLRFRLMNDSQLAFQHLPAKDRSRIIVSLSNDCLEREMREDLDPGYVPHVLQVRDLLAQVYSSEPDVPVLKILKKKPHLFLELISMISRVAEEASDNNRALREEIKTRSDEEKVRKAFYISERIKRGLVDRPKMCTVLPVWKLAPCFPYYSSSVVGSIFHKEGHDFSSVSRFISEHFDLRRVNRKGYKPSGFRLDGYQVQVTFMALVSKKPHVPGTTDLAKSGYQIAKKVVYLETQERGLFVLSQARKDTRKIVADRVHTYNLTVVDPGCASVVSVRSCTLKFCRCVGSVREKSTDWEMKGTEYSVKSGRTMLEGREKKRRSNDEYGRCFPTFSAVKKKTARKSSFLAYCRVAAETFKVMFAEKMKRARKRSRFHSSRLVQKTVDKLASNIAACPSNRKNIVLFGNGSFRAMKGHASAPRKKLVRAICSRVNAGMLDEFRTSKMCPGGCGGEMTDVQGG--QRVRQCTTVCVGVENPCPLF-ENGV----AFRCDRDASAT 2007
MSRYTGSFR CWAAINIRISGKNTRN+FS+L+DEFIDQSGFDTSLF P+VPCRLQETVTREMEVS+KNSIVVHLEA+IKGFLRFRLMNDSQLAF HLPAKDRSR+ P +C Q T ++ +PG ++ + + RKIVADRV+ YNLTVV PGCASVVSVRSC L+FCRCVGSVREKSTDWEMKGTEYSVKSGRTMLEGREKKRRSNDEYGRCFP FSAVKKKTARKSSFLAYCRVAA+TFKVMFAEKMKRARKRSRFHSSRLVQKTVDKLASNIAACPS+RKNIVLFGNGSFRAMKG+ASAPRKKLVRAICSRVN GMLDEFRTSKMCPGGCGGEMTDVQGG QC + V C E+G+ + RC R +T
Sbjct: 1 MSRYTGSFR-------------------------------CWAAINIRISGKNTRNNFSNLVDEFIDQSGFDTSLFPPRVPCRLQETVTREMEVSAKNSIVVHLEARIKGFLRFRLMNDSQLAFLHLPAKDRSRL----------------------------------------------------------------------------------------------------------PSLC----------------------------------------------------------------QTTAWNERREETSIPGPSERKRR---------------------RDPTRKXRKIVADRVYAYNLTVVGPGCASVVSVRSCPLEFCRCVGSVREKSTDWEMKGTEYSVKSGRTMLEGREKKRRSNDEYGRCFPRFSAVKKKTARKSSFLAYCRVAAKTFKVMFAEKMKRARKRSRFHSSRLVQKTVDKLASNIAACPSDRKNIVLFGNGSFRAMKGYASAPRKKLVRAICSRVNVGMLDEFRTSKMCPGGCGGEMTDVQGGIDSVGEQCREIVTSVVAFCTEHRESGMVNVRSKRCGRSGCST 389
BLAST of mRNA_Ecto-sp13_S_contig12245.1889.1 vs. uniprot
Match: UPI0000161E54 (EsV-1-178/222 paralog 2 n=2 Tax=Ectocarpus siliculosus virus 1 TaxID=37665 RepID=UPI0000161E54) HSP 1 Score: 138 bits (347), Expect = 3.160e-30 Identity = 176/682 (25.81%), Postives = 287/682 (42.08%), Query Frame = 1
Query: 175 IRDRLERMSRYTGSFRYIVGLFSNYVVIRRLEQGLQPPEVKKVFYDRCWAAINIRISGKNTRNDFSDLLDEFIDQSGFDTSLFHPKVPC--RLQETVTREMEVSSKNSIVVHLEAK----IKGFLRFRLMNDSQLAFQHLPAKDRSRIIVSLSNDCLE------------REMREDLDPGYVPHVLQVRDLLAQVYSSEP--DVPVLKILKKKPHLFLELISMISRVAEEASDNNRALREEIKTRSDEEKVRKAFYISERIKRGLVDRPKMCTVLPVWKLAPCFPYYSSSVVGSIFHKEGHD---FSSVSRFISEHFDLR-RVNRK---------GYKPS---------------GFRLDGYQVQVTFMALVSKKPHVPGTTDLAKSGY-QIAKKVVYLET---QERGLFVLSQARKDTRKIVADRVHTYNLTVVDPGCASVVSVRSCTLKFC--RCVGSVREKSTDWEMKGTEYSVKSGRTMLEGREKKRRSNDEYGRCFPTFSAVKKKTARKSSFLAYCRVAAETFKVMFAEKMKRARKRSRFHSSRLVQKTVDKLASNIAACPSNRKNIVLFGNGSFRAMKGHASAPRKKLVRAICSRVNAGMLDEFRTSKMCPGGCGGEMTDVQGGQRVRQCTTVCVGV-ENPCPLFENGVAFRCDRDASATLNFCLAGNCGLVRKLW 2055
+ D ++ +SR R + LF+N+V + RL+ G PE + F+ C ++ + G + DF D F + +G T L PK + +E + M ++ H E + + FLR R+ L K + + +L+ + R M +DPG +++ + +S D + +K +F ++ R+ EEA + K ++ +K R F E + PK VLP+ F Y +GS +D + V R S+ +++ VN++ GY S F DG Q+++ L + G+++L + GY ++ + V LE+ + RG++ +S K T I D V + DPG A V++V S T + + G + + ST + G +Y + + + E RR YG KK+T+ ++F+ YCR V+F E ++ RK RF R QKT+ +A + ++LFG SFRA KG ASAPRK L+R + SR M++E+ TSKMCPG CG E T +R+R C +G E C L F DRD + N + G L+ ++W
Sbjct: 101 VNDAVDHLSRE----RVLASLFANFVFMERLQNGSALPEPDRAFFKSCLSSCILSRGGGSLNADF----DRFSEITGL-TRLVPPKSMNLDQQREHEAQRMATATSTRATHHAEKRRISITRWFLRGRISRGD------LDCKKYATKLYNLAEKIITNFDGTPEDTQKLRTMSRAIDPGTDTNIIIDFAWQEKEFSDRDRGDGKSAETIKHLNWMFNTYVAESRRMYEEAVSRSHLFAPG-KDKACRKK-RDEFMKHELGEEFTYAPPKDTAVLPICSTGAVFIYIDMKTLGSWGLLHSNDAWWYKDVLRPFSKEANVKCLVNKENARYASSEHGYLSSLLESGPDKCPWMIGESFLTDGVQIKLLLKTLEHGRKAFSGSSELNEKGYNKLPRADVQLESLLGEGRGVYNISSLLKST-SIREDVV----VMSADPGQAKVINVSSATARTWAKQDPGVILKTSTC--VFGDDYRRDTLASRSDEYETFRRKGQPYGVAIDRLGNEKKRTSCLATFIQYCRRWCVNGPVLFRETLQTGRKFMRFDRFRATQKTLALIADKYMGHVEDTCRVMLFGKASFRAQKGRASAPRKALIREMASRGVVLMVNEYNTSKMCPG-CG-EDTVEDKERRIRSCKNFKIGSPEESCRLHRLTPEFEMDRDDVGSTNIGMRGFGKLLGQVW 756
BLAST of mRNA_Ecto-sp13_S_contig12245.1889.1 vs. uniprot
Match: A0A6H5JA56_9PHAE (DDE_Tnp_1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JA56_9PHAE) HSP 1 Score: 121 bits (304), Expect = 7.020e-25 Identity = 103/326 (31.60%), Postives = 158/326 (48.47%), Query Frame = 1
Query: 1099 FRLDGYQVQVTFMALVSKKPHVPGTTDLAKSGY-QIAKKVVYLET---QERGLFVLSQARKDTRKIVADRVHTYNLTVVDPGCASVVSVRSCTLKFC--RCVGSVREKSTDWEMKGTEYSVKSGRTMLEGREKKRRSNDEYGRCFPTFSAVKKKTARKSSFLAYCRVAAETFKVMFAEKMKRARKRSRFHSSRLVQKTVDKLASNIAACPSNRKNIVLFGNGSFRAMKGHASAPRKKLVRAICSRVNAGMLDEFRTSKMCPGGCGGEMTDVQGGQRVRQCTTVCVGV-ENPCPLFENGVAFRCDRDASATLNFCLAGNCGLVRKLW 2055
F DG Q+++ + L + PG+T L ++GY ++ + V LE+ + RG++ +S D+ I D V + DPG A V++V S T + + G + ST + G +Y + + + E RR + YG KK+T+ ++F+ YC+ + E ++ ARK RF R QKT+ K+A + ++LFG SFRA KG ASAPRK L+R + SR M++E+ TSK CPG CG E T +R+R C +G E C L F DRD + N + G L+ + W
Sbjct: 479 FLTDGVQIKLLLVTLEHGRKAFPGSTQLNEAGYNKLPRADVQLESLLREGRGVYNISSLL-DSPSIREDVV----VMSADPGQAKVINVSSATARTWARQDPGVILNSSTC--VFGDDYRRDTLASRSDKYETFRRKDQPYGVAIDRLRNEKKRTSCLATFIRYCKSWCANGAALLLETLQEARKFLRFDRFRATQKTLAKIADKYMGHVGDPCRVMLFGKASFRAQKGRASAPRKALIREMASRGVVLMVEEYNTSKKCPG-CG-EDTVEDKERRIRSCKNFKIGSPEESCRLHPLTPEFEMDRDDVGSTNIGMRGFGKLLGQEW 795
BLAST of mRNA_Ecto-sp13_S_contig12245.1889.1 vs. uniprot
Match: Q6XLT6_9PHYC (FirrV-1-M1 n=1 Tax=Feldmannia irregularis virus a TaxID=231992 RepID=Q6XLT6_9PHYC) HSP 1 Score: 118 bits (295), Expect = 8.350e-24 Identity = 161/684 (23.54%), Postives = 280/684 (40.94%), Query Frame = 1
Query: 175 IRDRLERMSRYTGSFRYIVGLFSNYVVIRRLEQGLQPPEVKKVFYDRCWAAINIRISGKNTRNDFSDLLDEFIDQSGFDTSLFHPKVPCRLQETV--TREMEVSSKNSIVVHLEAKIKGFLRFRLMNDSQLAFQHLPAKDRSRIIVSLSNDCLE------------REMREDLDPGYVPH-----VLQVRDLLAQVYSSEPDVPVLKILKKKPHLFLELISMISRVAEEASDNNRAL----REEIKTRSDEEKVRKAFYISERIKRG-LVDRPKMCTVLPVWKLAPCFPYYSSSVVGS--IFHK-EGHDFSSVSRFISEHFDLRRV----------NRKGYKPS---------------GFRLDGYQVQVTFMALVSKKPHVPGTTDLAKSGY-QIAKKVVYLET---QERGLFVLSQARKDTRKIVADRVHTYNLTVVDPGCASVVSVRSCTLKFCRCVGSVREKSTDWEMKGTEYSVKSGRTMLEGREKKRRSNDEYGRCFPTFSAVKKKTARKSSFLAYCRVAAETFKVMFAEKMKRARKRSRFHSSRLVQKTVDKLASNIAACPSNRKNIVLFGNGSFRAMKGHASAPRKKLVRAICSRVNAGMLDEFRTSKMCPGGCGGEMTDVQGGQRVRQCTTVCVGV-ENPCPLFENGVAFRCDRDASATLNFCLAGNCGLVRKLW 2055
+ + ++ +SR R + LFSN+V + RL G PE F+ C ++ IR G + DF D F +G + L PK Q+ +M S+ H E + R+ L +++ + KD + + L+ + REM + LD G P L+ ++ +++ P + L +F +S R EE +L +EI + +E ++ + RG ++ P+ +VLP+ F + + S +FH + + +V R S +++ + + +GY S F DG Q+++ + L + G++ L + GY ++ + LET + RG++ +S ++ I D V + DPG A V++V S T + V T + G +Y ++ + + E RR YG KK+T+ ++F+ YCR + E +++ R+ RF R Q + ++A + ++LFG SF A KG ASAPRK+L+R + +R M++E+ TSK CPG + D + +R+R C VG E C L DRD + N + G L+ + W
Sbjct: 111 VNEAVDHLSRE----RVLASLFSNFVYMERLRDGSTLPEPDVKFFGSCLSSC-IRSKGGSLNADF----DRFSSLTGL-SRLVPPKHLNLGQQRQFEANQMATSTSTRATHHSEKRRISITRWFLWE--RISGGNSRPKDYATKLFILAKKIITDFEGTEEQKQKLREMAKALDSGMDPEPIIEFALKEKEFSDNFSANQKCAPTIAHLD---WMFKTYVSESRRKYEEVLSRAHSLFPGEEKEISKKRNE-------FMKRELGRGDIIAPPRDTSVLPICSTGSVFIHVDMKTLKSWGLFHSNDAWWYKNVLRPFSREANIKCLRSRENTRYASSEQGYLSSLLDNGPAKCPWFVGESFLTDGVQIKLLLVTLEHTRESFSGSSQLNEEGYSKLPRADAPLETLLEKGRGVYNISSL-VESESIRGDLV----VMSADPGQAKVINVCSATSETWEKKDPVAILKTSTCVFGDDYRRETLASHSDEYETLRRRGTSYGIAIDRLRDEKKRTSCLTTFIQYCRSWCANSSALMNETLQKGRRFLRFGRHRATQSILARIADRFMGHVGDICRVMLFGKASFSAKKGRASAPRKRLIREMAARGVVLMVNEYNTSKQCPGCLEDTVEDKE--RRIRSCINFKVGSPEESCRLHPLTPVLEMDRDDVGSTNIGMRGFGQLLGQKW 765
BLAST of mRNA_Ecto-sp13_S_contig12245.1889.1 vs. uniprot
Match: A0A835Z996_9STRA (Uncharacterized protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z996_9STRA) HSP 1 Score: 110 bits (275), Expect = 2.310e-21 Identity = 151/650 (23.23%), Postives = 258/650 (39.69%), Query Frame = 1
Query: 142 RTLVKSVMPKY-IRDRLERMSRYTGSFRYIVGLFSNYVVIRRLEQGLQPPEVKKVFYDRCWAAINIRISGKNTRNDFSDLLDEFIDQSGFDTSLFHPKVPCRLQETVTREMEVSSKNSIVVHLEAKIKGFLRFRLMNDSQLAFQHLPAKDRS-----RIIVSLSNDCLERE----MREDLD---PGYVPHVLQVRDLLAQVYSSEPDVPVLKILKKK----PHLFLELISMISRVAEEASDNNRALREEIKTRSDEEKVRKAFYISERIKRGLVDR--PKMCTVLPVWKLAPCFPYYSSSVVGSIFHKEGHDFS--SVSRFISEHFDLRRV-----NRKGYKPSG--------------------FRLDGYQVQVTFMALVSKKPHVPGTTDLAKSGYQIAKKVVYLET---QERGLFVLSQARKDTRKIVADRVHTYNLTV--VDPGCASVVSVRSCTLKFCRCVGSVREKSTDWE-MKGTEYSVKS--GRTMLEGREKKRRSNDEYGRCFPTFSAVKKKTARKSSFLAYCRVAAETFKVMFAEKMKRARKRSRFHSSRLVQKTVDKLASNIAACPSNRKNIVLFGNGSFRAMKGHASAPRKKLVRAICSRVNAGMLDEFRTSKMCPGGCGGEMTDVQGGQ--RVRQCT 1923
RT++K KY I ++ + Y R LFSN+VVI L+ P++ F+ C+ + +N +++ + D F P + ++ ++ ++K + VH ++++KG + L S + H D++ +V+ + C E E+L P YV V + + + + L+K+ P EL+ I+ IK ++K K S +K L+ + PK+ LP+ F S + ++F S F+ + L + + G G F DG+Q+++ + + PG L +GY++ K V L+T RG++ DT I R ++ + +DPG ++ T R + T +E + TE +K R E RS YG+ T +KK++R +AYCR + +AE +K+ RK RF R +Q V + I R+ +++FGNGSF+A KGH S PRK++VRA+ M DE+ +SK P CG E+ ++ G+ R R C+
Sbjct: 98 RTVLKDTALKYDILCKMNELVEYFSKVRVYASLFSNFVVISCLDSTTPLPQIDSAFFRDCFGVFCYP-TRQNPLSEYMERFTSLTDLPAFPA----PPLTKEVKNDQATKLWTATKTRMEVHYQSRVKGISNWVLR--SLIRPHHTDITDKAFSAKIHKLVTFIDTCASSEGVDAKLEELGFDKPPYVDAVKTFAERAKKQTTVTNQIQHWYDLQKEYVDEPRRRFELMVRIA----------------IKMYPGKDKASKTAR-STYLKAQLIGKAPPKILAPLPMASPKAAFIRIDKSTMKALFPSLDIQMGPWGYSAFLDPYSKLANIRCLRNSTWGRSERGMMAAIGNQDMTECPWLVAPTFETDGHQMKLCLLTSDATNGGAPGVRYLNDAGYKLRTKNVPLQTILDLGRGVY------NDTGIIYGGREAVDDVYIGGIDPGIIKPINCIYGTGAAWRDMKGALTHDTAFEYVVVTEDDIKQMYNRGRSSHNEAVMRSRTPYGQALKTLWKYRKKSSRLQDIIAYCRTWRSVESLYWAEILKKVRKVRRFERFRNIQTQVQNIRKKITTHLQGRRGLLVFGNGSFKAKKGHISVPRKQIVRALAIECAVVMGDEYGSSKYSPL-CGHELVNLDNGEGRRTRVCS 716
BLAST of mRNA_Ecto-sp13_S_contig12245.1889.1 vs. uniprot
Match: A0A835ZPZ6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZPZ6_9STRA) HSP 1 Score: 105 bits (262), Expect = 8.080e-20 Identity = 108/392 (27.55%), Postives = 170/392 (43.37%), Query Frame = 1
Query: 919 PKMCTVLPVWKLAPCFPYYSSSVVGSIF---HKEGHDFSSVSRFISEHFDLRRV-----NRKGYKP----SGFRLDGYQVQVTFMALVSKKPHVPGTTDLAKSGYQ-IAKKVVYLETQ---ERGLFVLSQARKDTRKIVADRVHTYNLTVVDPGCASVVSVRSCTLKFCRCVGSVREKSTDWEMKGTEYSVKSGRTMLEGREKKRRSNDEYGRCFPTFSAVKKKTARKSSFLAYCRVAAETFKVMFAEKMKRARKRSRFHSSRLVQKTVDKLASNIAACP----SNRKNIVLFGNGSFRAMKGHASAPRKKLVRAICSRVNAGMLDEFRTSKMCPGGCGGEMTDVQGGQRVRQCTTVCVGVENPCPLFENGVAFRCDRDASATLNFCLAGNC 2034
PK+C+ LP F + S+ + +F E ++ +R+ + + N K P + F+ DG Q+++ + +P G L ++GY ++ + V L G+F L R T ++ A+ ++ VDPG + + RC+ R++ D E T+ +RR+N YG ++K+T+ + +A+C A + ++ E + R + FH VQ V+ +A + CP S R+ IV FG SF+ KGHAS PRKKLVR + R GM E +S CPG CG E T G R R+CT+ CPL G++ DRD A + L G C
Sbjct: 333 PKICSPLPHCSPGATFVRFDSTCLKQLFPALRGEAAGSNACNRYSRSEKGMFQAIAAASNPKARCPWLVAASFQTDGRQIKLQLVTSRRTRPAPAGLDRLHEAGYSGVSTRDVQLAEALGAGAGVFQLKHLRGGTEEMFAE----LDVVGVDPGQPAHAGGARRLYRGARCL---RKEGQDRE------------TV------RRRTNAAYGMAVEALRRLRKRTSSSAELVAFCAEWALREEEVWRELLDARRLKLAFHRYSAVQSAVEHVAERL--CPRVAASGRRRIVFFGAASFKPRKGHASCPRKKLVRVLACRAVVGMTPESGSSCRCPG-CG-ERTRSGPGYRTRECTSTPAD----CPLVAAGLSVF-DRDNGAEVTIALRGVC 690
BLAST of mRNA_Ecto-sp13_S_contig12245.1889.1 vs. uniprot
Match: A0A835YSX9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSX9_9STRA) HSP 1 Score: 88.2 bits (217), Expect = 3.230e-16 Identity = 63/172 (36.63%), Postives = 87/172 (50.58%), Query Frame = 1
Query: 1531 VKKKTARKSSFLAYCRVAAETFKVMFAEKMKRARKRSRFHSSRLVQKTVDKLASNIAACP----SNRKNIVLFGNGSFRAMKGHASAPRKKLVRAICSRVNAGMLDEFRTSKMCPGGCGGEMTDVQGGQRVRQCTTVCVGVENPCPLFENGVAFRCDRDASATLNFCLAGNC 2034
++K+T+ + +A+C A + ++ E + R + FH VQ V+ +A + CP S R+ IV FG SF+ KGHAS PRKKLVR + R GM E +S CPG CG E T G R R+CT+ CPL G++ DRD A + L G C
Sbjct: 9 LRKRTSSFAERVAFCAEWALREEEVWRELLDARRLKLAFHRYSAVQSAVEHVAERL--CPRVAASGRRRIVFFGAASFKPQKGHASCPRKKLVRVLACRAVVGMTPESGSSCRCPG-CG-ERTRSGPGYRTRECTSTPAD----CPLVAAGLSVF-DRDNGAEVTIALRGVC 171 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12245.1889.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 14
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig12245.1889.1 >prot_Ecto-sp13_S_contig12245.1889.1 ID=prot_Ecto-sp13_S_contig12245.1889.1|Name=mRNA_Ecto-sp13_S_contig12245.1889.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=694bp MEVDTENPDPRTKKRCTRKNGVEQSLRAEGDEESGSTRQSCICLDLERTLback to top mRNA from alignment at Ecto-sp13_S_contig12245:1706..3787+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig12245.1889.1 ID=mRNA_Ecto-sp13_S_contig12245.1889.1|Name=mRNA_Ecto-sp13_S_contig12245.1889.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2082bp|location=Sequence derived from alignment at Ecto-sp13_S_contig12245:1706..3787+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig12245:1706..3787+ >mRNA_Ecto-sp13_S_contig12245.1889.1 ID=mRNA_Ecto-sp13_S_contig12245.1889.1|Name=mRNA_Ecto-sp13_S_contig12245.1889.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=2082bp|location=Sequence derived from alignment at Ecto-sp13_S_contig12245:1706..3787+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |