mRNA_Ecto-sp13_S_contig12228.1875.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig12228.1875.1
Unique NamemRNA_Ecto-sp13_S_contig12228.1875.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig12228.1875.1 vs. uniprot
Match: D7FI32_ECTSI (T-complex protein 1 subunit epsilon n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FI32_ECTSI)

HSP 1 Score: 567 bits (1462), Expect = 2.470e-200
Identity = 288/294 (97.96%), Postives = 290/294 (98.64%), Query Frame = 1 
Query:    1 SLDRQKVDGKPGGELGDTELIHGIVIDKEFSHAQMPKVVKDAKLCLLTCPFEPPKPKTKHKLDITSKDAYEKLFEREQKYFSDMVQQCKDVGTNLVICQWGFDDEANHLLLQNQLPAVRWVGGVELELIAIATGARIVPRFSELTGEKLGKAGAVREVSFGTTKDRMLVIEDCSNSSAVTVLVRGGNKMIVEEAKRSLHDAMCVVRNLIKDKRIVYGGGSAEISCSVAVSRMADEIKGVEQYAVRSFADALDDVPMALAENSGLSPITELSAVKSRQIAEGITSLGIDCNQVDT 882
            + D  KVDGKPGGELGDTELIHGIVIDKEFSHAQMPKVVKDAKLCLLTCPFEPPKPKTKHKLDITSKDAYEKLFEREQKYF+DMVQQCKDVGTNLVICQWGFDDEANHLLLQNQLPAVRWVGGVELELIAIATGARIVPRFSELTGEKLGKAGAVREVSFGTTKDRMLVIEDCSNSSAVTVLVRGGNKMIVEEAKRSLHDAMCVVRNLIKDKRIVYGGGSAEISCSVAVSRMADEIKGVEQYAVRSFADALDDVPMALAENSGLSPITELSAVKSRQIAEGITSLGIDCNQV T
Sbjct:  201 NFDMIKVDGKPGGELGDTELIHGIVIDKEFSHAQMPKVVKDAKLCLLTCPFEPPKPKTKHKLDITSKDAYEKLFEREQKYFADMVQQCKDVGTNLVICQWGFDDEANHLLLQNQLPAVRWVGGVELELIAIATGARIVPRFSELTGEKLGKAGAVREVSFGTTKDRMLVIEDCSNSSAVTVLVRGGNKMIVEEAKRSLHDAMCVVRNLIKDKRIVYGGGSAEISCSVAVSRMADEIKGVEQYAVRSFADALDDVPMALAENSGLSPITELSAVKSRQIAEGITSLGIDCNQVGT 494
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BLAST of mRNA_Ecto-sp13_S_contig12228.1875.1 vs. uniprot
Match: A0A835ZI55_9STRA (T-complex protein 1 subunit epsilon n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZI55_9STRA)

HSP 1 Score: 488 bits (1256), Expect = 6.020e-169
Identity = 242/294 (82.31%), Postives = 263/294 (89.46%), Query Frame = 1 
Query:    1 SLDRQKVDGKPGGELGDTELIHGIVIDKEFSHAQMPKVVKDAKLCLLTCPFEPPKPKTKHKLDITSKDAYEKLFEREQKYFSDMVQQCKDVGTNLVICQWGFDDEANHLLLQNQLPAVRWVGGVELELIAIATGARIVPRFSELTGEKLGKAGAVREVSFGTTKDRMLVIEDCSNSSAVTVLVRGGNKMIVEEAKRSLHDAMCVVRNLIKDKRIVYGGGSAEISCSVAVSRMADEIKGVEQYAVRSFADALDDVPMALAENSGLSPITELSAVKSRQIAEGITSLGIDCNQVDT 882
            + D  KVDGKPGGELGDTEL+ GIVIDKEFSH QMPK +KDAKLC+LTCPFEPPKPKTKHKLDITSK+AYE+L EREQ+YF  MV+QCKD G NLVICQWGFDDEANHLLLQN LPAVRWVGGVELELIAIATG RIVPRF EL+ +KLG AG VREV+FGTTKDRMLVIE C NS+AVTVLVRGGNKMIV+EAKRSLHDAMCVVRNLIKD RIVYGGGSAEI+CS+ VS  AD I GVEQYAVR+FADALDDVPMALAENSGLSPI+ELSAVK+ Q+ +G + LGIDCNQ  T
Sbjct:  208 NFDMIKVDGKPGGELGDTELVRGIVIDKEFSHPQMPKEIKDAKLCILTCPFEPPKPKTKHKLDITSKEAYERLHEREQQYFDTMVKQCKDSGANLVICQWGFDDEANHLLLQNDLPAVRWVGGVELELIAIATGGRIVPRFQELSADKLGYAGTVREVAFGTTKDRMLVIEGCKNSNAVTVLVRGGNKMIVDEAKRSLHDAMCVVRNLIKDNRIVYGGGSAEIACSIEVSNAADAIGGVEQYAVRAFADALDDVPMALAENSGLSPISELSAVKAAQVKDGNSHLGIDCNQEGT 501
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BLAST of mRNA_Ecto-sp13_S_contig12228.1875.1 vs. uniprot
Match: A0A482RX78_9ARCH (T-complex protein 1 subunit epsilon n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RX78_9ARCH)

HSP 1 Score: 476 bits (1225), Expect = 7.480e-165
Identity = 229/291 (78.69%), Postives = 262/291 (90.03%), Query Frame = 1 
Query:    1 SLDRQKVDGKPGGELGDTELIHGIVIDKEFSHAQMPKVVKDAKLCLLTCPFEPPKPKTKHKLDITSKDAYEKLFEREQKYFSDMVQQCKDVGTNLVICQWGFDDEANHLLLQNQLPAVRWVGGVELELIAIATGARIVPRFSELTGEKLGKAGAVREVSFGTTKDRMLVIEDCSNSSAVTVLVRGGNKMIVEEAKRSLHDAMCVVRNLIKDKRIVYGGGSAEISCSVAVSRMADEIKGVEQYAVRSFADALDDVPMALAENSGLSPITELSAVKSRQIAEGITSLGIDCNQ 873
            + D  K++GKPGG L +TELI GIV+DKEFSH QMPK +KDAK+C+LTCPFEPPKPKTKHKLDITSK+AY KL++ EQ YF+ MV+QCKD G NLVICQWGFDDEANHLLLQNQLPAVRWVGGVELELIAIATG RIVPRFSELT EKLGKAG VREVSFGTTK+RMLVIEDC++S+AVTVL+RGGNKMIVEEAKRSLHDAMCVVRNLIKD RIVYGGGSAEI+CS+ VS  AD + G+EQYA+R+FADAL+D+PMALAENSGLSPI E+++ K+RQ++E    LG+DCNQ
Sbjct:  157 NFDMIKMEGKPGGRLEETELIKGIVVDKEFSHPQMPKTIKDAKICILTCPFEPPKPKTKHKLDITSKEAYNKLYQYEQDYFTTMVKQCKDSGANLVICQWGFDDEANHLLLQNQLPAVRWVGGVELELIAIATGGRIVPRFSELTAEKLGKAGTVREVSFGTTKERMLVIEDCASSNAVTVLIRGGNKMIVEEAKRSLHDAMCVVRNLIKDNRIVYGGGSAEIACSLEVSAFADTVPGIEQYAIRAFADALEDIPMALAENSGLSPIAEVTSTKARQLSENNPRLGVDCNQ 447
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BLAST of mRNA_Ecto-sp13_S_contig12228.1875.1 vs. uniprot
Match: A0A7S0SVG4_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SVG4_9STRA)

HSP 1 Score: 469 bits (1208), Expect = 7.480e-165
Identity = 224/286 (78.32%), Postives = 261/286 (91.26%), Query Frame = 1 
Query:   19 VDGKPGGELGDTELIHGIVIDKEFSHAQMPKVVKDAKLCLLTCPFEPPKPKTKHKLDITSKDAYEKLFEREQKYFSDMVQQCKDVGTNLVICQWGFDDEANHLLLQNQLPAVRWVGGVELELIAIATGARIVPRFSELTGEKLGKAGAVREVSFGTTKDRMLVIEDCSNSSAVTVLVRGGNKMIVEEAKRSLHDAMCVVRNLIKDKRIVYGGGSAEISCSVAVSRMADEIKGVEQYAVRSFADALDDVPMALAENSGLSPITELSAVKSRQIAEGITSLGIDCNQV 876
            ++GKPGG L DTELI GIVIDKEFSH QMPK +KDAK+C+LTCPFEPPKPKTKHKLDITSK+AY+KL+ REQ+YF+ MV+QCKD G NLVICQWGFDDEANHLLLQN+LPAVRWVGGVELELIAIATG RIVPRF ELT +KLGKAG VREVSFGTTK++MLVIEDC+ S+AVTVL+RGGNKMIVEEAKRSLHDAMCVVRNLI+D R+VYGGGSAEISC++AVS  AD + G+EQYA+R+FADAL+D+PMALAEN+GLSPI E++ +K+RQ++E    LG+DCNQ+
Sbjct:    1 MEGKPGGRLEDTELIKGIVIDKEFSHPQMPKEIKDAKICILTCPFEPPKPKTKHKLDITSKEAYDKLYLREQEYFTTMVKQCKDSGANLVICQWGFDDEANHLLLQNELPAVRWVGGVELELIAIATGGRIVPRFQELTSDKLGKAGLVREVSFGTTKEKMLVIEDCACSNAVTVLIRGGNKMIVEEAKRSLHDAMCVVRNLIRDNRVVYGGGSAEISCALAVSSYADTVPGIEQYAIRAFADALEDIPMALAENAGLSPINEVTTIKARQLSENNPRLGVDCNQL 286
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BLAST of mRNA_Ecto-sp13_S_contig12228.1875.1 vs. uniprot
Match: A0A7S2SNU9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SNU9_9STRA)

HSP 1 Score: 471 bits (1213), Expect = 5.060e-164
Identity = 228/294 (77.55%), Postives = 261/294 (88.78%), Query Frame = 1 
Query:    1 SLDRQKVDGKPGGELGDTELIHGIVIDKEFSHAQMPKVVKDAKLCLLTCPFEPPKPKTKHKLDITSKDAYEKLFEREQKYFSDMVQQCKDVGTNLVICQWGFDDEANHLLLQNQLPAVRWVGGVELELIAIATGARIVPRFSELTGEKLGKAGAVREVSFGTTKDRMLVIEDCSNSSAVTVLVRGGNKMIVEEAKRSLHDAMCVVRNLIKDKRIVYGGGSAEISCSVAVSRMADEIKGVEQYAVRSFADALDDVPMALAENSGLSPITELSAVKSRQIAEGITSLGIDCNQVDT 882
            + D  K++GKPGG L +TEL+ GIV+DK+FSH QMPKVV+DAK+C+LTCPFEPPKPKTKHKLDITS++AYEKL+++EQ YF +MVQQCKD G NLVICQWGFDDEANHLLLQN LPAVRWVGGVELELIAIATG RIVPRFSEL+ EKLG+AG VREV+FGT K+RMLVIEDC+NSSAVT+LVRGGN MIVEEAKRSLHDAMCVVRNLIKD RIVYGGG+AEI+CS A+S+ AD + G EQYA+R+FADALDD+PMALAENSG SPI++LSAVKSRQ+ E    LGIDC    T
Sbjct:   99 NFDLIKMEGKPGGRLDETELVQGIVVDKDFSHPQMPKVVEDAKMCILTCPFEPPKPKTKHKLDITSREAYEKLYDQEQAYFKEMVQQCKDCGANLVICQWGFDDEANHLLLQNDLPAVRWVGGVELELIAIATGGRIVPRFSELSAEKLGRAGTVREVAFGTLKERMLVIEDCANSSAVTILVRGGNSMIVEEAKRSLHDAMCVVRNLIKDNRIVYGGGAAEIACSNAISKYADTVVGTEQYALRAFADALDDIPMALAENSGFSPISQLSAVKSRQVTEQNPHLGIDCKAKGT 392
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BLAST of mRNA_Ecto-sp13_S_contig12228.1875.1 vs. uniprot
Match: A0A7S2BNZ2_9STRA (T-complex protein 1 subunit epsilon n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BNZ2_9STRA)

HSP 1 Score: 473 bits (1217), Expect = 3.930e-163
Identity = 231/294 (78.57%), Postives = 264/294 (89.80%), Query Frame = 1 
Query:    1 SLDRQKVDGKPGGELGDTELIHGIVIDKEFSHAQMPKVVKDAKLCLLTCPFEPPKPKTKHKLDITSKDAYEKLFEREQKYFSDMVQQCKDVGTNLVICQWGFDDEANHLLLQNQLPAVRWVGGVELELIAIATGARIVPRFSELTGEKLGKAGAVREVSFGTTKDRMLVIEDCSNSSAVTVLVRGGNKMIVEEAKRSLHDAMCVVRNLIKDKRIVYGGGSAEISCSVAVSRMADEIKGVEQYAVRSFADALDDVPMALAENSGLSPITELSAVKSRQIAEGITSLGIDCNQVDT 882
            + D  K++GKPGG+LG+TELI GIVIDK+FSH QMPK V DAK+C+LTCPFEPPKPKTKHKLDITSK+AY+KL E+EQ+YF+ MV+QCKD G NLVICQWGFDDEANHLLLQN LPAVRWVGGVELELIAIATG RIVPRFSELT EKLGKAG VREV+FGT K+RMLV+EDC+NS+AVTVLVRGGN MIVEEAKRSLHDAMCVVRNLIK+ RIVYGGG+AEI+CS A++  AD+  GV+QYA+R+FADAL+D+PMALAENSGLSPIT+LSAVKSRQ+ EG   LGIDC +  T
Sbjct:  201 NFDMIKMEGKPGGQLGETELIKGIVIDKDFSHPQMPKEVIDAKMCILTCPFEPPKPKTKHKLDITSKEAYDKLHEQEQEYFTQMVKQCKDSGANLVICQWGFDDEANHLLLQNDLPAVRWVGGVELELIAIATGGRIVPRFSELTSEKLGKAGRVREVAFGTLKERMLVVEDCANSNAVTVLVRGGNSMIVEEAKRSLHDAMCVVRNLIKNNRIVYGGGAAEIACSNAITAQADDKTGVDQYALRAFADALEDIPMALAENSGLSPITQLSAVKSRQVTEGNPHLGIDCKRAGT 494
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BLAST of mRNA_Ecto-sp13_S_contig12228.1875.1 vs. uniprot
Match: W7TKH6_9STRA (T-complex protein 1 subunit epsilon n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TKH6_9STRA)

HSP 1 Score: 473 bits (1216), Expect = 5.570e-163
Identity = 229/291 (78.69%), Postives = 262/291 (90.03%), Query Frame = 1 
Query:    1 SLDRQKVDGKPGGELGDTELIHGIVIDKEFSHAQMPKVVKDAKLCLLTCPFEPPKPKTKHKLDITSKDAYEKLFEREQKYFSDMVQQCKDVGTNLVICQWGFDDEANHLLLQNQLPAVRWVGGVELELIAIATGARIVPRFSELTGEKLGKAGAVREVSFGTTKDRMLVIEDCSNSSAVTVLVRGGNKMIVEEAKRSLHDAMCVVRNLIKDKRIVYGGGSAEISCSVAVSRMADEIKGVEQYAVRSFADALDDVPMALAENSGLSPITELSAVKSRQIAEGITSLGIDCNQ 873
            + D  KV+GKPGG L DTEL+ GIV+DKE SH QMPK +KDAK+ +LTCPFEPPKPKTKHKLDI+S++AYE+L+EREQ+YF+ MV+QCKD G NL+ICQWGFDDEANHLLLQNQLPAVRWVGGVELELIAIATG RIVPRFSEL+ EKLG+AG VREV+FGTTK+RMLVIEDC+ S AVT+LVRGGNKMIVEEAKRSLHDAMCVVRNLIKD RIVYGGGSAEISCS+AV++ AD   GV+QYA+R+FADALDDVPMALAEN+GLSPITELS VKS+QI +G   +G+DC Q
Sbjct:  201 NFDMIKVEGKPGGRLEDTELVRGIVVDKEISHPQMPKTIKDAKIAILTCPFEPPKPKTKHKLDISSREAYERLYEREQEYFTTMVRQCKDSGANLIICQWGFDDEANHLLLQNQLPAVRWVGGVELELIAIATGGRIVPRFSELSPEKLGRAGLVREVAFGTTKERMLVIEDCAKSQAVTILVRGGNKMIVEEAKRSLHDAMCVVRNLIKDNRIVYGGGSAEISCSIAVAKAADTETGVDQYAIRAFADALDDVPMALAENAGLSPITELSQVKSQQIKDGNPHIGVDCMQ 491
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BLAST of mRNA_Ecto-sp13_S_contig12228.1875.1 vs. uniprot
Match: A0A7S3HCP3_9STRA (T-complex protein 1 subunit epsilon n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HCP3_9STRA)

HSP 1 Score: 472 bits (1214), Expect = 1.120e-162
Identity = 227/292 (77.74%), Postives = 264/292 (90.41%), Query Frame = 1 
Query:    1 SLDRQKVDGKPGGELGDTELIHGIVIDKEFSHAQMPKVVKDAKLCLLTCPFEPPKPKTKHKLDITSKDAYEKLFEREQKYFSDMVQQCKDVGTNLVICQWGFDDEANHLLLQNQLPAVRWVGGVELELIAIATGARIVPRFSELTGEKLGKAGAVREVSFGTTKDRMLVIEDCSNSSAVTVLVRGGNKMIVEEAKRSLHDAMCVVRNLIKDKRIVYGGGSAEISCSVAVSRMADEIKGVEQYAVRSFADALDDVPMALAENSGLSPITELSAVKSRQIAEGITSLGIDCNQV 876
            + D  KV+GKPGG L +TELI GIVIDKEFSH QMPK +KDAK+C+LTCPFEPPKPKTKHK+DITSK+AY+KL++ EQ YF+ MV+QCKD G NLVICQWGFDDEANHLLLQN LPAVRWVGGVELELIAIATG RIVPRFSEL+  KLG+AG VREVSFGTTK+RMLVIEDC+ S+AVTVL+RGGNKMIV+EA RSLHDAMCVVRNLIKD R+VYGGGSAEI+CS+AVS  AD + G+EQYA+R+FADALDD+PMALAEN+GLSPITE++++K+RQ+AEG   LG+DCNQ+
Sbjct:  201 NFDMIKVEGKPGGRLEETELIKGIVIDKEFSHPQMPKEIKDAKMCILTCPFEPPKPKTKHKMDITSKEAYDKLYKYEQDYFTTMVKQCKDSGANLVICQWGFDDEANHLLLQNGLPAVRWVGGVELELIAIATGGRIVPRFSELSEAKLGRAGTVREVSFGTTKERMLVIEDCACSNAVTVLIRGGNKMIVDEAHRSLHDAMCVVRNLIKDNRVVYGGGSAEIACSLAVSAFADTVPGIEQYAIRAFADALDDLPMALAENAGLSPITEVTSIKARQLAEGNPRLGVDCNQI 492
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BLAST of mRNA_Ecto-sp13_S_contig12228.1875.1 vs. uniprot
Match: M4BF38_HYAAE (T-complex protein 1 subunit epsilon n=30 Tax=Oomycota TaxID=4762 RepID=M4BF38_HYAAE)

HSP 1 Score: 461 bits (1185), Expect = 2.800e-158
Identity = 225/289 (77.85%), Postives = 257/289 (88.93%), Query Frame = 1 
Query:   16 KVDGKPGGELGDTELIHGIVIDKEFSHAQMPKVVKDAKLCLLTCPFEPPKPKTKHKLDITSKDAYEKLFEREQKYFSDMVQQCKDVGTNLVICQWGFDDEANHLLLQNQLPAVRWVGGVELELIAIATGARIVPRFSELTGEKLGKAGAVREVSFGTTKDRMLVIEDCSNSSAVTVLVRGGNKMIVEEAKRSLHDAMCVVRNLIKDKRIVYGGGSAEISCSVAVSRMADEIKGVEQYAVRSFADALDDVPMALAENSGLSPITELSAVKSRQIAEGITSLGIDCNQVDT 882
            KV+GKPGG L +T LI+GIVIDK+FSH QMPK VKDAK+C+LTCPFEPPKPKTKHK+DITS +AYE+L+++EQ+YF+ M++Q K+ G NLVICQWGFDDEANHLLLQN LPAVRWVGGVELELIAIATG RIVPRFSELT EKLG+AG VREV+FGTTK+RMLVIEDC++S AVTVLVRGGNKMIVEEAKRSLHDAMCV RNLIK+ RIVYGGGSAEI+C +AV   AD  KG+EQYA+R+FADAL+DVPMALAENSGLSPI  LSAV+++QIAE    LGIDCN   T
Sbjct:  206 KVEGKPGGTLAETALINGIVIDKDFSHPQMPKEVKDAKMCILTCPFEPPKPKTKHKVDITSVEAYEQLYKQEQEYFTTMIKQVKESGANLVICQWGFDDEANHLLLQNDLPAVRWVGGVELELIAIATGGRIVPRFSELTAEKLGRAGTVREVAFGTTKERMLVIEDCASSDAVTVLVRGGNKMIVEEAKRSLHDAMCVTRNLIKNNRIVYGGGSAEIACGIAVRNHADNTKGIEQYAIRAFADALEDVPMALAENSGLSPIDSLSAVRAQQIAENNPRLGIDCNSTGT 494
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BLAST of mRNA_Ecto-sp13_S_contig12228.1875.1 vs. uniprot
Match: A0A7S4E7P5_9STRA (T-complex protein 1 subunit epsilon n=3 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E7P5_9STRA)

HSP 1 Score: 459 bits (1182), Expect = 8.790e-158
Identity = 225/294 (76.53%), Postives = 256/294 (87.07%), Query Frame = 1 
Query:    1 SLDRQKVDGKPGGELGDTELIHGIVIDKEFSHAQMPKVVKDAKLCLLTCPFEPPKPKTKHKLDITSKDAYEKLFEREQKYFSDMVQQCKDVGTNLVICQWGFDDEANHLLLQNQLPAVRWVGGVELELIAIATGARIVPRFSELTGEKLGKAGAVREVSFGTTKDRMLVIEDCSNSSAVTVLVRGGNKMIVEEAKRSLHDAMCVVRNLIKDKRIVYGGGSAEISCSVAVSRMADEIKGVEQYAVRSFADALDDVPMALAENSGLSPITELSAVKSRQIAEGITSLGIDCNQVDT 882
            + D  K++GKPGG L +TELI GIVIDK+ SH QMPK ++D K+C+LTCPFEPPKPKTKHKLDI+SK+ Y+KLF+REQ YF DMV+QCK  G NLVICQWGFDDEANHLLLQ +LPAVRWVGGVELELIAIATG RIVPRFSEL   KLG+AG VREVSFGTTK+RMLVIEDC++S AVTVLVRGGNKMIVEEAKRSLHDAMCVVRNL++D RIVYGGG+AEI+CSVAVS+ AD   G EQYA+R+FADALDDVPMALAENSGLSPI EL+AVK+ Q+A+    LG+DC Q  T
Sbjct:  204 NFDLIKMEGKPGGRLEETELIKGIVIDKDMSHPQMPKEIRDVKMCILTCPFEPPKPKTKHKLDISSKEDYDKLFQREQAYFGDMVEQCKACGANLVICQWGFDDEANHLLLQAELPAVRWVGGVELELIAIATGGRIVPRFSELDASKLGRAGVVREVSFGTTKERMLVIEDCASSEAVTVLVRGGNKMIVEEAKRSLHDAMCVVRNLVRDNRIVYGGGAAEIACSVAVSKAADAATGPEQYAIRAFADALDDVPMALAENSGLSPIAELTAVKAAQVAQNCPFLGVDCLQQGT 497
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12228.1875.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FI32_ECTSI2.470e-20097.96T-complex protein 1 subunit epsilon n=2 Tax=Ectoca... [more]
A0A835ZI55_9STRA6.020e-16982.31T-complex protein 1 subunit epsilon n=1 Tax=Tribon... [more]
A0A482RX78_9ARCH7.480e-16578.69T-complex protein 1 subunit epsilon n=1 Tax=archae... [more]
A0A7S0SVG4_9STRA7.480e-16578.32Hypothetical protein n=1 Tax=Chromulina nebulosa T... [more]
A0A7S2SNU9_9STRA5.060e-16477.55Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2BNZ2_9STRA3.930e-16378.57T-complex protein 1 subunit epsilon n=1 Tax=Floren... [more]
W7TKH6_9STRA5.570e-16378.69T-complex protein 1 subunit epsilon n=2 Tax=Monodo... [more]
A0A7S3HCP3_9STRA1.120e-16277.74T-complex protein 1 subunit epsilon n=1 Tax=Spumel... [more]
M4BF38_HYAAE2.800e-15877.85T-complex protein 1 subunit epsilon n=30 Tax=Oomyc... [more]
A0A7S4E7P5_9STRA8.790e-15876.53T-complex protein 1 subunit epsilon n=3 Tax=Pelago... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12228contigEcto-sp13_S_contig12228:510..5135 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score569.7
Seed ortholog evalue7.9e-160
Seed eggNOG ortholog2880.D7FI32
Preferred nameCCT5
Model size882
KEGG koko:K09497
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005832,GO:0005886,GO:0005911,GO:0006457,GO:0006458,GO:0008150,GO:0009506,GO:0009987,GO:0016020,GO:0030054,GO:0032991,GO:0044183,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0051082,GO:0055044,GO:0061077,GO:0071944,GO:0101031
Exons6
EggNOG free text desc.unfolded protein binding
EggNOG OGsCOG0459@1,KOG0357@2759
Cds size882
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03036,ko03110,ko04147
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12228.1875.1prot_Ecto-sp13_S_contig12228.1875.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig12228 510..5135 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462650.3762696-CDS-Ecto-sp13_S_contig12228:509..6681681462650.3762696-CDS-Ecto-sp13_S_contig12228:509..668Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12228 510..668 -
1681462650.3879848-CDS-Ecto-sp13_S_contig12228:1843..20021681462650.3879848-CDS-Ecto-sp13_S_contig12228:1843..2002Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12228 1844..2002 -
1681462650.397576-CDS-Ecto-sp13_S_contig12228:2802..29411681462650.397576-CDS-Ecto-sp13_S_contig12228:2802..2941Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12228 2803..2941 -
1681462650.40769-CDS-Ecto-sp13_S_contig12228:3369..35091681462650.40769-CDS-Ecto-sp13_S_contig12228:3369..3509Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12228 3370..3509 -
1681462650.417701-CDS-Ecto-sp13_S_contig12228:4147..43301681462650.417701-CDS-Ecto-sp13_S_contig12228:4147..4330Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12228 4148..4330 -
1681462650.4299612-CDS-Ecto-sp13_S_contig12228:5033..51351681462650.4299612-CDS-Ecto-sp13_S_contig12228:5033..5135Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12228 5034..5135 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig12228.1875.1

>prot_Ecto-sp13_S_contig12228.1875.1 ID=prot_Ecto-sp13_S_contig12228.1875.1|Name=mRNA_Ecto-sp13_S_contig12228.1875.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=294bp
SLDRQKVDGKPGGELGDTELIHGIVIDKEFSHAQMPKVVKDAKLCLLTCP
FEPPKPKTKHKLDITSKDAYEKLFEREQKYFSDMVQQCKDVGTNLVICQW
GFDDEANHLLLQNQLPAVRWVGGVELELIAIATGARIVPRFSELTGEKLG
KAGAVREVSFGTTKDRMLVIEDCSNSSAVTVLVRGGNKMIVEEAKRSLHD
AMCVVRNLIKDKRIVYGGGSAEISCSVAVSRMADEIKGVEQYAVRSFADA
LDDVPMALAENSGLSPITELSAVKSRQIAEGITSLGIDCNQVDT
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mRNA from alignment at Ecto-sp13_S_contig12228:510..5135-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig12228.1875.1 ID=mRNA_Ecto-sp13_S_contig12228.1875.1|Name=mRNA_Ecto-sp13_S_contig12228.1875.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4626bp|location=Sequence derived from alignment at Ecto-sp13_S_contig12228:510..5135- (Ectocarpus species13 EcNAP12_S_4_19m)
TCCCTCGACCGCCAAAAGGTTGACGGAAAACCGGGTGGCGAGCTGGGCGA
CACGGAACTTATCCACGGTATCGTCATCGACAAGGAGTTCTCTCACGCAC
AGGTGCACCTTGTTTTTGTTGTTGTACTTGCGTTTTGTTCATGCCGCGTC
TTCATCTCTATTTCATAGTTACGCACAGGTGCATTTTCGTTGTGGGCGTT
TTTTTTCCCGGCGTTTTATTCATGTCGCGGATTCATATCTAGTTTTGGCT
GTTCTTGCGGTACGTGTGGTTGTGTTGTTTCCCGCCGTGTTTGTCCTGTG
CTTGGTGGCTGGTTGGAGAAGAAGAGGAAGATCGGCTGAAAGGCTGAAGG
TACATCGTTCTTCTGTACAACTTTGAAGATTTTCACAAAAGGGTGTTTTA
CCTTTTGGATGTTGTGAACGCATTGCCATGTAGGAGCGCCCGAATTGCTG
GAGAATAGTCTCTCTGTATCTCCGGAGGGATGTAACACCTCTGAAAGTGG
GAGTGTGCTGTTTTTTTTTTATTTGAATGCCACTGCCACTGCTGCTGCTG
CTGCTGCTGTGGAGTCATTTTCCTCGACTAAAGTTGGAATATGATGTATT
TTGACTAGTTTACTGGCTGCTACCGCTGCTGCTGCAGCTGTTTTGGAACT
AAAATATGTTCCATACCTTAATGAGGGATTTGATGTGTTTTATTTTTGTT
TATGTGCTACCGCTGCTGCTGCTGCTGCTGCTGCTGCTGCCTCTGCTGCT
GTTGCGATTCATTCCATCAATTCCCGTTCCGCGTCGTGTCGCCAACCCGC
AACAGATGCCCAAGGTCGTGAAGGACGCGAAGCTGTGCCTCCTGACGTGT
CCCTTCGAGCCGCCCAAGCCGAAGACGAAGCACAAGCTGGACATCACATC
CAAGGACGCCTACGAGAAGCTGTTCGAGCGGGAACAGAAGTACTTCTCGG
ACATGGTGCAGCAGTGCAAGGACGTGGGAACCAACCTGGTGAGGGGAAGG
GGGAGAAGAAGGGGTTGTTGAATAAACACCAATTCGGAGGAGTGGGTTGT
TGAAATCACGAAAAGGAGGACGTGGGAACCGCCCTGTTGAGAGGGGAGCA
TGGGGTTGTGTCGAAGTCGACGACAATAGAAAAGAGGAAGAGAGTGGACC
GGCCTCGGTGACCCTGCACGTTGACGCCGTACGGATACCGTATGCATACC
GGAGGTGCATCCATCCTGATCATCTCGCCACGACTTTTTGCGCGCTTATA
TAAAGCACATGGAATATTTTCATCGGTTTTGATGAGCGCTCACACACGCA
GCACTGTCTACCGGGTAGGGGTTCCCAATTTCTGGTCACACAGAAGGGTG
CGGACGGTTTTTGGTGAAAAGAGAATCCCGGACGATTTTCGCGACAGTTC
TTCTCCTGAGAGAGCATGGTTGGATCAAACAGTCGGTGGCATCACGTCCC
ACGCCTGGTGTAGACGTATCCACTCCCTCCCTTTCTTCGAAGTTCTTGCG
TCTGATGCGATCTTCATTGGGAGGCTTGAACCAACCCATATGAAATCGAC
ACCACGATATTGTTTGTGGAGTTCTATGCATTCACGTTTCCTCCAATCGC
GTCACAACAATGGTCAATCGCTACAGGTGATCTGCCAGTGGGGCTTCGAT
GACGAGGCGAACCACCTGCTGCTCCAGAACCAGCTGCCGGCGGTGCGGTG
GGTCGGGGGTGTGGAGCTGGAGCTCATCGCGATCGCCACGGGCGCGCGAA
TCGTGCCCCGATTTAGGTGTGATGTTTCTGTGTTTAGCTTTTGTCGAATA
TGTTTTCGTTGCTCACTCATTGTGGTCGTTGCTCATTGTTGTCGTTACTG
TTTTTTAAATGTTGCTGCTCGTGCAGCTTCTTGTGCTGTTGTTGTGGGCG
GCATCGGCGGCGGCGGCGGCGCAGCTGGTGCTCTCGAAAGGCAACGCTCG
CGCGTATGCATTGCGGTGTAGGTGTTAAGGGGCCCTTGTCTGTCACCCGC
TTTGTAGCTGCAGTGCGCCGGTTTTCACTTGATCTTGTTCCGACGCGCGT
ATATCTTCAGTACTGGTAAATTTTCCAGACCCGGATGTCTCTACTCCCCC
CCGCTCCAAGCACATCCGCCCCCCTTCCACCTTCCTCTACTGCTGTTGTT
TGACGGCTTTCCTTGTTGTAATATTCTTTTTGCTTGTGTTTTAGCGAGTT
GACCGGAGAGAAGCTGGGGAAGGCCGGGGCGGTCCGTGAAGTGTCCTTCG
GCACCACCAAGGACCGCATGCTGGTCATCGAGGACTGCTCCAACTCTTCG
GCAGTGACGGTGCTCGTGCGGGGGGGCAACAAGGTGCGGTCGGTTTCTGT
ACCATCGTCGCGTGGCCGGGTGGCGGTGGTGTCGTGTGCACGTCGTGTAA
GCTGATTGATTGTTTTGTGAGGTGCACGCCTTTGGGTGTTGTTGGCCGAC
GTTGGAGTTTTGCTGCCACCAGCGTTACCGCTGGTTGGTTGTCTATTCCT
AGAGGTGCACGTGGTTGTTGGACGTTGCTTGCGCGTTGCGGGCTGTTTAC
TGTAGTCGCGGAAGGCCTGCACCAGGTCTCACTATCTTTTTTGAAGTTGC
CTGCCGATCAAGGGAGGACCTACTGGTTCGCCCAACAGCCGCGTTTTTTG
TCGTCATTTTCACGTTTGTCTCAAGAACAATTTGTGAATGTTGCTTTTCT
ACAAAACAACATCACGCAGATCTGGGTACGGTGTCGTTTCGCCTTTGATT
TGGCTCGGAATTCGGCTGTCGAAACCCTTTCAACACGTTACCTAGACCTA
TTGCTCGATCGACTAGACTGTGCTAGTTTCGTGACGTTTCATCTGAACAA
ACTTCTCGGAAACTTTCACATACATGCCTTGTTGTGTGGTTTGTTGGTGT
GGATTCCCGCGCTATCCTTTTCCCGTTCGAATACTGTGCTCATTCCTTGA
AATCAAAGCTCTCAAGACTTGGGGGTAAAATACAAATACCGCTCTCGATT
TCCTCCGACGAGTTTAAGGCATACGTACACACGGGATTGTTTTCAGGCAC
ACGTACGCACGGGAGTATTTGGCTTTTTCTCCGCCAAGTTTTTTCTCCCG
GTGCATCCACCCCTTGCCGTTGTCAAAAAATAGATGATTGTGGAGGAGGC
GAAGCGGTCGTTGCACGACGCCATGTGCGTGGTGCGGAACCTGATCAAGG
ACAAGCGCATCGTGTACGGGGGAGGGTCGGCGGAGATCAGCTGCAGCGTG
GCGGTATCCCGCATGGCGGACGAGATCAAGGGGGTCGAGCAGGTATGTAC
CATACCATACCATACCGTACCGTACCTCACCGTACCGTACCGCTAGATGT
GTGCGTTGGTGATGATGGAACCACGTGTTTCGATGGAGTGTTTTGGGCAA
CCACGTTGTTGCTGTTGTTTTTGTGGTTGTAGTAGTTACTCTTGTCGTCG
TTGCCCATATGGTATCTGTTGATGCTTTCGTGCTCTTTTGCCCCTGCGAC
GGGGAGGACGAGGGCGCCGTGATGCGTGTAACACGGTCAAAGGATGATGA
CTTCCCTCAGCCCCGGCCGGCCTTCTCGATTTTGCCGGCTGGGTCCGTGC
GGACAACCACACCTGAGCGCCTCCCGTCCCCCACCCTCACGTGGGTATTG
GTTGATCTTGCCCAGGTCGATGATTAATTCTGTATTTTTTTTGTTTTATC
AAAGTCGGTTGGTTGACCATACCATGTGCTAACATGGTGCTTGTTTCACA
CTTAACCATTTGGTGTTCCCAGGCCCGGCCAGATTTCCGATTGTGCGGAA
GACTTCACCTGAGCGCCTACCTCCCACCCGTAGGTGTTGCTTAATCTTTC
ACCGAGAGGTGATCGATTGATTCTCGTTTCCGAAAGCGGTTGGTCGTCCC
CAAGGGTAAGCGTGATGTGTACAGGACAGGAAGCTCGCGCTCGCTATGTG
GTTGTGTATTGTTGCGGTTGCCCATATCTGGTGGTGCAAGCCGTGCGTTT
CGCAGGACGTGATGGTATTCATACGACTCGATCGCGCGCCCCTCGCTCTC
GCTGAGCTGCTGCAACGGCTGCCGCTGAACGTATCCTCATCGAAGCCAAC
GCTGTGCGGAGCTCGGAGGATTCTTCGAACGTTGCCCTGCAGTCGTACCG
AAAATCAAGAGTACTTGTAGCGAAATTGTCAAGTACGTGTGCCCTCGTGG
CCTTTCCTCTTTTTCCTGGTTGCCGGTTGCCACTGACGCTCCCTGGTCTC
GTTGCGATCTCTTTTGCTCCCTTCGCACAAGGCTTGCCTTGCGAACTTCG
GAAGAAAGACGGCATTGAATACAACGCACGAAGTACCAGATTGTCGGAGG
TGTCTCTTTTGGGAGGAGGATCCTCGTCTCGCGAGAGTTGCGTGGTCAAT
GTCCAATGATGGCCGCAAGCAACATAACTCCCCCCCCCCCTTTGTTGTAC
TATCTCGTTGTGTGCAGTACGCCGTCCGGAGCTTCGCGGACGCTTTGGAC
GACGTCCCCATGGCCCTGGCCGAAAACTCGGGCCTGTCCCCCATCACCGA
GCTCTCGGCTGTGAAGTCGAGGCAGATCGCGGAGGGAATCACCTCGCTGG
GCATCGACTGCAACCAGGTAGATACC
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig12228:510..5135-

>mRNA_Ecto-sp13_S_contig12228.1875.1 ID=mRNA_Ecto-sp13_S_contig12228.1875.1|Name=mRNA_Ecto-sp13_S_contig12228.1875.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=882bp|location=Sequence derived from alignment at Ecto-sp13_S_contig12228:510..5135- (Ectocarpus species13 EcNAP12_S_4_19m)
TCCCTCGACCGCCAAAAGGTTGACGGAAAACCGGGTGGCGAGCTGGGCGA
CACGGAACTTATCCACGGTATCGTCATCGACAAGGAGTTCTCTCACGCAC
AGATGCCCAAGGTCGTGAAGGACGCGAAGCTGTGCCTCCTGACGTGTCCC
TTCGAGCCGCCCAAGCCGAAGACGAAGCACAAGCTGGACATCACATCCAA
GGACGCCTACGAGAAGCTGTTCGAGCGGGAACAGAAGTACTTCTCGGACA
TGGTGCAGCAGTGCAAGGACGTGGGAACCAACCTGGTGATCTGCCAGTGG
GGCTTCGATGACGAGGCGAACCACCTGCTGCTCCAGAACCAGCTGCCGGC
GGTGCGGTGGGTCGGGGGTGTGGAGCTGGAGCTCATCGCGATCGCCACGG
GCGCGCGAATCGTGCCCCGATTTAGCGAGTTGACCGGAGAGAAGCTGGGG
AAGGCCGGGGCGGTCCGTGAAGTGTCCTTCGGCACCACCAAGGACCGCAT
GCTGGTCATCGAGGACTGCTCCAACTCTTCGGCAGTGACGGTGCTCGTGC
GGGGGGGCAACAAGATGATTGTGGAGGAGGCGAAGCGGTCGTTGCACGAC
GCCATGTGCGTGGTGCGGAACCTGATCAAGGACAAGCGCATCGTGTACGG
GGGAGGGTCGGCGGAGATCAGCTGCAGCGTGGCGGTATCCCGCATGGCGG
ACGAGATCAAGGGGGTCGAGCAGTACGCCGTCCGGAGCTTCGCGGACGCT
TTGGACGACGTCCCCATGGCCCTGGCCGAAAACTCGGGCCTGTCCCCCAT
CACCGAGCTCTCGGCTGTGAAGTCGAGGCAGATCGCGGAGGGAATCACCT
CGCTGGGCATCGACTGCAACCAGGTAGATACC
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