mRNA_Ecto-sp13_S_contig1222.1872.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
|
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1222.1872.1 vs. uniprot
Match: D7G7G7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7G7_ECTSI) HSP 1 Score: 937 bits (2421), Expect = 0.000e+0 Identity = 470/514 (91.44%), Postives = 483/514 (93.97%), Query Frame = 2
Query: 686 MAFPSLNGLHFNKKGHLRPVEPRAAPPVAARSNASREGGDRGVVAAAEGDQVGTTLLFMHLWKCAGSSLRHLLRDWAEAKGQDIGIVVRCTDVVSETGKICLKRHSLINERFQAPFIRLHQVVAGHFTWGFQDHVRQPYVMFTTLRNPLELFVSGQQYLNRKASRHFAHAVSLVEDTIVHAIKQHQLRGDIMVPEGMGNTKSVGFIYRLVDPVQANSTQEGVVGEKTLSAGAQEAKDNLDTFWLVGVIEQYQGFMAVLQAMMDPNKSERDMWKRYAVGKYNTSPQGAGKVLAAIDPALVQEFNETLSHQWGVYSYAVDLYKHRCHQMLHTRDLDMCEVPVAPSQYTLTEVERESLYQEMHPEEVSFNPTEMVRAQHLWDDFRGKGSTIRNPGEEEALAFFELHGFDFTNPEKRDNFVSRLRIGMPTLALGEDVFGSDDRTPEEIAAAAXAEEQGGEDVKIEGDVEMDRGAVAAMADAVVGGEQKREEQRKEGREDINNLDQNAAGVKESKTMNR 2227
MAFPSLNGL FNKKGHLRPVEP APPVA SNAS + GDRG VAAA G +VGTTLLFMHLWKCAGSSLRHLLRDWAEAK QDIGIVVRCTDVVS+TGKICLK HSLINERFQAPFIRLHQVVAGHFTWGFQ+HVRQPYVMFTTLRNPLELFVSGQQYLNRKASRHFAHAVSLVEDTI+ AIKQHQLRGD+MVPEGMGNTKSVGFIYRLVDPVQANSTQEG+VG KTLSAGAQEAKDNLDTFWLVGVIEQYQGFMAVLQAMMDPNKSERDMWKRYAVGKYNTSPQGAGKVLAAIDPALVQEFNETLSHQW VYSYAVDLYKHRCHQMLHTRDLDMCEVPVAPSQYTLTE+ERESLYQEMHPEEVSFN TEMVRAQHLWD+FRG+GSTIRNP E EALAFFELHGFDFT+PEKRDNFVSRLRIGMPTLALGEDVFGSDDRTPEEIAAAA EEQGGEDVKI G+VE DRGA A M DAV GGE KREEQ+KEGRED N LDQ AAGV ESKTMNR
Sbjct: 1 MAFPSLNGLQFNKKGHLRPVEPHGAPPVAGSSNASSDEGDRGAVAAAAGAEVGTTLLFMHLWKCAGSSLRHLLRDWAEAKEQDIGIVVRCTDVVSKTGKICLKHHSLINERFQAPFIRLHQVVAGHFTWGFQNHVRQPYVMFTTLRNPLELFVSGQQYLNRKASRHFAHAVSLVEDTILRAIKQHQLRGDVMVPEGMGNTKSVGFIYRLVDPVQANSTQEGLVGGKTLSAGAQEAKDNLDTFWLVGVIEQYQGFMAVLQAMMDPNKSERDMWKRYAVGKYNTSPQGAGKVLAAIDPALVQEFNETLSHQWEVYSYAVDLYKHRCHQMLHTRDLDMCEVPVAPSQYTLTELERESLYQEMHPEEVSFNATEMVRAQHLWDEFRGEGSTIRNPREAEALAFFELHGFDFTDPEKRDNFVSRLRIGMPTLALGEDVFGSDDRTPEEIAAAAATEEQGGEDVKIGGNVETDRGAGAVMVDAVAGGELKREEQKKEGREDPNKLDQKAAGVTESKTMNR 514
BLAST of mRNA_Ecto-sp13_S_contig1222.1872.1 vs. uniprot
Match: A0A6H5KGA9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGA9_9PHAE) HSP 1 Score: 920 bits (2377), Expect = 0.000e+0 Identity = 484/614 (78.83%), Postives = 507/614 (82.57%), Query Frame = 2
Query: 332 MPKLRETGKRAAVSDGLGLDGGDGTNGRRFWDSVLSFVLLACRSRFLAATCCFCVAAVLLKNTVGQARTWSRLTSSSSSASMRQGPTDAELEAMITYPLDDGGPGPPWVPPDERPIPLMAFPSLNGLHFNKKGHLRPVEPRAAPPVAARSNASREGGDRGVVAAAEGDQVGTTLLFMHLWKCAGSSLRHLLRDWAEAKGQDIGIVVRCTDVVSETGKICLKRHSLINERFQAPFIRLHQVVAGHFTWGFQDHVRQPYVMFTTLRNPLELFVSGQQYLNRKASRHFAHAVSLVEDTIVHAIKQHQLRGDIMVPEGMGNTKSVGFIYRLVDPVQANSTQEGVVGEKTLSAGAQEAKDNLDTFWLVGVIEQYQGFMAVLQAMMDPNKSERDMWKRYAVGKYNTSPQGAGKVLAAIDPALVQEFNETLSHQWGVYSYAVDLYKHRCHQMLHTRDLDMCEVPVAPSQYTLTEVERESLYQEMHPEEVSFNPTEMVRAQHLWDDFRGKGSTIRNPGEEEALAFFELHGFDFTNPEKRDNFVSRLRIGMPTLALGEDVFGSDDRTPEEIAAAAXAEEQGGEDVKIEGDVEMDRGAVAAMADAVV-GGEQKREEQRKEGRED 2170
MPKLR TGKR AVS+G GLD G+G NGRRFWDS LS V LACRSRFL ATCCFCV AVLLKNTVGQARTWSRLTSSSSSASMR+GPTDAELEAMITY LDDGGPG WVPPDERPIPLMAFPSLNG FNKKGHLRPVEPRAAPPVAA SNAS +GGDRGVVA AEGD+VGTTLLFMHLWKCAGSSLRHLLRDWAEAKGQ IGIVVRCTDVVS+TGKICLKRHSLINERFQAPFIRLHQVVAGHFTWG L P E S + Y + ++ F D V + + EG VG KTLSAGAQEA DNLDTFWLVGVIEQYQGFMAVLQAMMDPNKSERDMWKRYAVGKYNTSPQGAGKVLAAIDPALVQEFNETLSHQW VYSYAVDLYKHRC QMLHTRDLDMCEVPVAPSQYTLTE+ERESLYQE+HPEEVSFN TEMVRAQHLWD+FRGKGSTIRNP EEEALAFFELHGFDFT+PEKRDNFVSRLRIGMPTLALGEDVFGSDDRTPEEIA+AA AEEQGGED+KI G+VE D+GA AMADAVV GGEQKRE+Q+KEGR+D
Sbjct: 1 MPKLRGTGKRGAVSEGRGLDSGNGNNGRRFWDSALSVVFLACRSRFLGATCCFCVVAVLLKNTVGQARTWSRLTSSSSSASMREGPTDAELEAMITYTLDDGGPGRRWVPPDERPIPLMAFPSLNGFQFNKKGHLRPVEPRAAPPVAASSNASSDGGDRGVVAPAEGDEVGTTLLFMHLWKCAGSSLRHLLRDWAEAKGQYIGIVVRCTDVVSKTGKICLKRHSLINERFQAPFIRLHQVVAGHFTWG--------------LHRPKEC--SEKWY---------------------------------------SDMETTAF-----DQVVSTAEPEGGVGGKTLSAGAQEAMDNLDTFWLVGVIEQYQGFMAVLQAMMDPNKSERDMWKRYAVGKYNTSPQGAGKVLAAIDPALVQEFNETLSHQWEVYSYAVDLYKHRCRQMLHTRDLDMCEVPVAPSQYTLTELERESLYQEIHPEEVSFNATEMVRAQHLWDEFRGKGSTIRNPSEEEALAFFELHGFDFTDPEKRDNFVSRLRIGMPTLALGEDVFGSDDRTPEEIASAAAAEEQGGEDIKIGGNVETDKGARVAMADAVVVGGEQKREKQKKEGRKD 554
BLAST of mRNA_Ecto-sp13_S_contig1222.1872.1 vs. uniprot
Match: A0A6H5JGJ5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGJ5_9PHAE) HSP 1 Score: 224 bits (570), Expect = 1.750e-61 Identity = 119/297 (40.07%), Postives = 189/297 (63.64%), Query Frame = 2
Query: 845 TTLLFMHLWKCAGSSLRHLLRDWAEAKGQDIGIVVRCTDVVSETGKICLKRHSLINERFQAPFIRLHQVVAGHFTWGFQDHVRQPYVMFTTLRNPLELFVSGQQYLNRKASRHFAHAVSLVEDTIVHAIKQH---QLRGDIMVPEGMGNTKSVG-FIYRLVDPVQANSTQEGVVGEKTLSAGAQEAKDNLDTFWLVGVIEQYQGFMAVLQAMMDPNKSERDMWKRYAVGKYNTSPQGAGKVLAAIDPALVQEFNETLSHQWGVYSYAVDLYKHRCHQMLHT-RDLDMCEVPVAPSQY 1720
+T++F+H++KCAGS+LR +L WAEA+ + IV RC + SE +ICL L++E Q + +V+AGHF WGFQ H+R+PY+M T LRNPLE++VS QQY +++ ++ A + V + ++Q+ G+ +P G + + +G F++RLV ++ + GEK L +A +NL+TFWLVG++EQY GF+ VL+ ++DP + D+W+ Y+ ++NTSP + VLAA+DP LV+EFN +L+ QW VY AV L+ RC ++L + ++C V + S+Y
Sbjct: 39 STVMFLHVFKCAGSTLRRMLVAWAEAEDELGAIVHRC-NYTSEAREICLAHFKLVDEPVQLELLSRQKVLAGHFLWGFQRHLRRPYLMVTALRNPLEVYVSAQQYTHKRKTKTLEKAQAFVSKAMRKTLRQYGDGPALGEEEMPFGGKSPQQIGGFVFRLV-----GINKKQLYGEK-LEVAVTKAIENLETFWLVGLVEQYAGFVEVLELLLDPERKHVDVWQTYSTRQFNTSPLRSRDVLAALDPQLVREFNGSLALQWRVYEKAVALWDLRCREVLPVAKHEELCTVALPFSEY 328
BLAST of mRNA_Ecto-sp13_S_contig1222.1872.1 vs. uniprot
Match: A0A6H5JAP0_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JAP0_9PHAE) HSP 1 Score: 213 bits (542), Expect = 1.930e-57 Identity = 122/320 (38.12%), Postives = 176/320 (55.00%), Query Frame = 2
Query: 827 EGDQVGTTLLFMHLWKCAGSSLRHLLRDWAEAKGQDIGIVVRCTDVVSETGKICLKRHSLINERFQAPFIRLHQVVAGHFTWG-------------------FQDHVRQPYVMFTTLRNPLELFVSGQQYLNRKASRHFAHAVSLVEDTIVHAIKQHQLRGDIMVPEGMGNTKSVGFIYRLVDPVQANSTQEGVVGEKTLSAGAQEAKDNLDTFWLVGVIEQYQGFMAVLQAMMDPNKSERDMWK-RYAVGKYNTSPQGAGKVLAAIDPALVQEFNETLSHQWGVYSYAVDLYKHRCHQML-HTRDLDMCEVPVAPSQYT 1723
EG Q+ TL+F+H+WKC G++LR L+ DWA ++G V C + + K+CL + LI Q FI +V+AGHF WG FQ + +P+ + TTLRNPLELFVSG+QYLNR + + AV +VE +R + P T+ G+++RLV VV + E NL TFWLVGV+EQY GF+AVL+A++DP+ D+W+ + K N SP + VLA++DP LV++FN TLS+QW +Y +AV L++ RC ++L + + C V P +YT
Sbjct: 55 EGGQMDGTLMFLHVWKCGGTTLRRLMCDWANSEGLPCATVAGCGHLSLKERKVCLLNYKLIFPEQQGEFIARQKVLAGHFRWGESRVTSACHTVTRTLFASGFQVYAAEPHWLVTTLRNPLELFVSGEQYLNRATTATLSKAVQVVE---------RAMRKSLETP-----TQPPGYLHRLVG--------RSVVTNAEIREATVEGARNLKTFWLVGVVEQYGGFVAVLRALLDPDGLHDDLWRPQLEEHKLNASPVQSSNVLASLDPQLVKQFNSTLSYQWLMYGHAVRLFRARCQEVLPEYQHWEFCSVQQPPVEYT 352
BLAST of mRNA_Ecto-sp13_S_contig1222.1872.1 vs. uniprot
Match: A0A6H5JGQ3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGQ3_9PHAE) HSP 1 Score: 212 bits (540), Expect = 5.450e-56 Identity = 125/316 (39.56%), Postives = 181/316 (57.28%), Query Frame = 2
Query: 845 TTLLFMHLWKCAGSSLRHLLRDWAEAKGQDIGIVVRCTDVVSETGKICLKRHSLINERFQAPFIRLHQVVAGHFTWGFQDHVRQPYVMFTTLRNPLELFVSGQQYLNRKASRHF-----AHAVSLVEDTIVHAIK-----------------QHQLRGDIMVPEGMGNTKSVGFIYRLVDPVQANSTQEGVVGEKTLSAGAQEAKDNLDTFWLVGVIEQYQGFMAVLQAMMDPNKSERDMWKRYAVGKYNTSPQGAGKVLAAIDPALVQEFNETLSHQWGVYSYAVDLYKHRCHQMLHTRDLD-MCEVPVAPSQYT 1723
+T++F+H++KCAGS+LR + DWA+A+G IV C +V E G ICL +H LI E Q + +++AGHF WGFQ V +P++M T+LRNPLE FVSG+Q+L+ + AHA + V +++A+ LRG P+ +G GFI+RLV A G+ LS A EA NL+ FW+VGV+EQY G AVL+ ++DP+ +W +Y+ N SP + VLAAIDP+LV++FN++L+ QW VY AV+L+ RC ++L D MC V S+Y+
Sbjct: 152 STVMFLHVFKCAGSTLRQMFVDWAKAEGASGAIVTSCDEVQKE-GVICLAKHELIKESVQMKMLLKQKILAGHFIWGFQRLVEKPFLMVTSLRNPLEAFVSGRQFLHPDMTETLEQASAAHAQAFVSYAMLNALGIDGPGHVAMLGERASLGHALLRGRRQSPDQLG-----GFIFRLVGQENAKKLH-GLA----LSRAADEAMKNLEAFWVVGVVEQYAGLQAVLKRLLDPDLKHPALWDKYSYRHSNRSPVDSRYVLAAIDPSLVRQFNDSLALQWKVYEKAVELWGTRCREVLPITVHDAMCTVAPPDSRYS 456
BLAST of mRNA_Ecto-sp13_S_contig1222.1872.1 vs. uniprot
Match: A0A6H5KCZ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCZ6_9PHAE) HSP 1 Score: 191 bits (485), Expect = 1.610e-49 Identity = 121/331 (36.56%), Postives = 192/331 (58.01%), Query Frame = 2
Query: 764 PVAARSNASREGGDRGVVA-----AAEGDQVGT-------TLLFMHLWKCAGSSLRHLLRDWAEAKGQDIGIVVRC-TDVVSETGKICLK-RHSLINERFQAPFIRLHQVVAGHFTWGFQDHVRQPYVMFTTLRNPLELFVSGQQYLNRKASRHFAHAVSLVEDTIVHAIKQHQLRGDIMVPEGMGNTKSVGFIYRLVDPVQANSTQEGVV-GEKTLSAGAQEAKDNLDTFWLVGVIEQYQGFMAVLQAMMDPNKSERDMWKRYAVGKY-NTSPQGAGKVLAAIDPALVQEFNET-LSHQWGVYSYAVDLYKHRCHQMLHTRDLD-MCEVP 1702
P+AA E G +G+V A+G ++ + T+LF+H++KCAG++LR +L WA+ +G + IV C + + G+ICL ++ L++ + + +++AGHF W F+ +V PY+M TTLRNPLELFVS QQ++++ ++ +V+ V ++ + G + + FI R +D ANS V+ ++ +SA Q A D+L+TF++VGV+EQYQGF+ VL+ +DP++S +W AVG N SP +G VL+ IDP LV+EFN T L+ QW VY A+ L+ RC ++L D + +C VP
Sbjct: 63 PLAAPGGGGGEEGAKGLVLQPKTLVADGPELSSFPSVSNSTILFLHVFKCAGTTLREVLTTWAKLEGLNGAIVEYCRSKTFTNVGRICLNSQNDLMDPIREKWLVAGSKLLAGHFLWDFRHYVTPPYLMVTTLRNPLELFVSSQQFMHKAETKTLDDSVAFVGQSMKSRL-------------GWADPTDLAFIRRFLDSETANSYDPQVLYSDEEMSAMVQTAVDHLNTFYVVGVVEQYQGFIEVLKRTLDPDESHPKLWAA-AVGVLDNGSPVHSGDVLSGIDPDLVREFNATALARQWQVYDVALKLWDSRCREILPPEDHEALCSVP 379
BLAST of mRNA_Ecto-sp13_S_contig1222.1872.1 vs. uniprot
Match: D8LHE4_ECTSI (Similar to heparin sulfate O-sulfotransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHE4_ECTSI) HSP 1 Score: 180 bits (457), Expect = 4.150e-47 Identity = 105/281 (37.37%), Postives = 164/281 (58.36%), Query Frame = 2
Query: 875 CAGSSLRHLLRDWAEAKGQDIGIVVRC-TDVVSETGKICLK-RHSLINERFQAPFIRLHQVVAGHFTWGFQDHVRQPYVMFTTLRNPLELFVSGQQYLNRKASRHFAHAVSLVEDTIVHAIKQHQLRGDIMVPEGMGNTKSVGFIYRLVDPVQANSTQEGVV-GEKTLSAGAQEAKDNLDTFWLVGVIEQYQGFMAVLQAMMDPNKSERDMWKRYAVGKYNTSPQGAGKVLAAIDPALVQEFNET-LSHQWGVYSYAVDLYKHRCHQMLHTRDLD-MCEVP 1702
CAG++LR +L WA+ +G + IV C + + G+ICL ++ L+N + + +++AGHF W F+ +V PY+M TTLRNPLELFVS QQ++++ ++ +V+ V ++ +K + + FI R +D ANS V+ ++ +SA Q A D+L+TF++VGV+EQYQGF+ VL+ +DP++S +W K N SP +G VL+ IDP LV+EFN T L QW VY A+ L+ RC ++L + + +C VP
Sbjct: 2 CAGTTLREVLTTWAKLEGWNGAIVEYCRSKTFTNAGRICLNSQNDLMNPIREKWLVAGSKLLAGHFLWDFRHYVTPPYLMVTTLRNPLELFVSSQQFMHKAETKTLDDSVAFVGQSMRSRLK-------------WADPTDLAFIRRFLDSKTANSYDPQVMYSDEEMSAMVQTAVDHLNTFYVVGVVEQYQGFIEVLKRTLDPDESHPKLWAAAVGVKDNGSPVHSGDVLSGIDPDLVREFNATTLGRQWQVYDVALKLWDRRCREILPAEEHEALCSVP 269
BLAST of mRNA_Ecto-sp13_S_contig1222.1872.1 vs. uniprot
Match: A0A6H5KPF0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPF0_9PHAE) HSP 1 Score: 152 bits (384), Expect = 3.480e-36 Identity = 105/298 (35.23%), Postives = 155/298 (52.01%), Query Frame = 2
Query: 845 TTLLFMHLWKCAGSSLRHLLRDWAEAKGQDIGIVVRCTDVVSET-------GKICLKR--HSLINERFQAPFIRLHQVVAGHFTWGFQDHVRQPYVMFTTLRNPLELFVSGQQYLNRKASRHFAHAVSLVEDTIVHAIKQHQLRGDIMVPEGMGNTKSVGFIYRLVDPVQA-NSTQEGVVGEKTLSAGAQEAKDNLDTFWLVGVIEQYQGFMAVLQAMMDPNKSERDMWKRYAVGKYNTSPQGAGKVLAAIDPALVQEFNET-LSHQWGVYSYAVDLYKHRCHQMLHTRDLDM-CEVP 1702
+T LF+H++KCAG+SLR + +A+ G ++ C+ E IC++ H +E + +V+AGHF W F+ PY+M TTLRNPLELFVS Q+ +R +R A A V Q+R I+ EG+G +GFI ++ A GV A A E+ ++L+TF +VGV+EQY+GF+ VL+ +DP +W A + N SP + VL +DP LV+ +NET L QW VY A+ L+ RC ++L D + C+VP
Sbjct: 90 STTLFLHVFKCAGTSLREVFMAFAKTNGWTGAVIAGCSKTQKEFQFHDPPGSVICVRHEDHRPKDENIGRWLVSGTKVLAGHFFWDFRLMAAPPYLMVTTLRNPLELFVSALQFKHRDETRTLAGATRFVTS---------QMR-TILGLEGLGQ---LGFIRVFLNDTGAVGYNPRGVYTHNETWAMATESVEHLNTFLVVGVVEQYEGFIEVLKHTLDPGLENPSVWTTGANVQNNKSPVPSRDVLRNMDPYLVRLYNETRLDLQWKVYEVALQLWDSRCREVLPPSDHERYCDVP 374
BLAST of mRNA_Ecto-sp13_S_contig1222.1872.1 vs. uniprot
Match: D8LIP4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIP4_ECTSI) HSP 1 Score: 142 bits (358), Expect = 4.310e-33 Identity = 89/249 (35.74%), Postives = 133/249 (53.41%), Query Frame = 2
Query: 965 VSETGKICLK-RHSLINERFQAPFIRLHQVVAGHFTWGFQDHVRQPYVMFTTLRNPLELFVSGQQYLNRKASRHFAHAVSLVEDTIVHAIKQHQLRGDIMVPEGMGNTKSVGFIYRLVDPVQANSTQEGVVGEKTLSAG-AQEAKDNLDTFWLVGVIEQYQGFMAVLQAMMDPNKSERDMWKRYAVGKYNTSPQGAGKVLAAIDPALVQEFNETLSHQWGVYSYAVDLYKHRCHQMLHTRD-LDMCEVP 1702
V E+ ICL +++L + Q + +V+AGHF W + +V P+++ T LR+PLELFVS +Q+ +R+ + A V +RG + G + +GF+ R + ANS +V K S+ A A ++L FW+VGV+EQY GF+ VLQ +DP +W+ + N SP + VL IDP LV+EFN TLS QW VY A+ L+ RC ++L +D +C VP
Sbjct: 105 VWESHVICLNDQNALRDSASQRWEVAGTRVLAGHFLWDLRQYVTPPHLLITMLRDPLELFVSAKQFKHREETASLEAAADFVASN---------MRGRL----GWEDPSDIGFVRRFLGTDAANSYDPQLVYTKEQSSAMASTAAEHLSNFWVVGVVEQYAGFVNVLQHTLDPELEHPRLWEAASEVNNNGSPVHSRDVLDRIDPDLVREFNATLSFQWQVYDVALQLWDSRCREVLPLQDHSSLCSVP 340
BLAST of mRNA_Ecto-sp13_S_contig1222.1872.1 vs. uniprot
Match: D7FJ87_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ87_ECTSI) HSP 1 Score: 131 bits (330), Expect = 3.630e-30 Identity = 87/222 (39.19%), Postives = 121/222 (54.50%), Query Frame = 2
Query: 1046 QVVAGHFTWGFQDHVRQPYVMFTTLRNPLELFVSGQQYLNRKASRHFAHAVSLVEDTIVHAIKQHQLRGDIMVPEGMGNTKSVGFIYRLVDPVQA-NSTQEGVVGEKTLSAGAQEAKDNLDTFWLVGVIEQYQGFMAVLQAMMDPNKSERDMWKRYAVGKYNTSPQGAGKVLAAIDPALVQEFNET-LSHQWGVYSYAVDLYKHRCHQMLHTRDLDM-CEVP 1702
+V+AGHF W F+ PY+M TTLRNPLELFVS Q+ +R +R A A V Q+R I+ EG+G +GFI ++ A GV A A E+ ++L+TF +VGV+EQY+GF+ VL+ +DP +W A + N SP + VL IDP LV+ +NET L QW VY A+ L+ RC ++L D + C+VP
Sbjct: 57 KVLAGHFFWDFRLMAAPPYLMVTTLRNPLELFVSALQFKHRDETRTLAGATRFVTS---------QMR-TILGLEGLGQ---LGFIRVFLNDTGAVGYNPRGVYTHNETWAMAAESVEHLNTFLVVGVVEQYEGFVEVLKHTLDPGLENPSVWTTGAKVQNNKSPVSSRDVLRNIDPYLVRLYNETRLDLQWKVYEVALQLWDSRCREVLPRSDHERYCDVP 265 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1222.1872.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1222.1872.1 >prot_Ecto-sp13_S_contig1222.1872.1 ID=prot_Ecto-sp13_S_contig1222.1872.1|Name=mRNA_Ecto-sp13_S_contig1222.1872.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=633bp MPKLRETGKRAAVSDGLGLDGGDGTNGRRFWDSVLSFVLLACRSRFLAATback to top mRNA from alignment at Ecto-sp13_S_contig1222:6807..17160+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1222.1872.1 ID=mRNA_Ecto-sp13_S_contig1222.1872.1|Name=mRNA_Ecto-sp13_S_contig1222.1872.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=10354bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1222:6807..17160+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1222:6807..17160+ >mRNA_Ecto-sp13_S_contig1222.1872.1 ID=mRNA_Ecto-sp13_S_contig1222.1872.1|Name=mRNA_Ecto-sp13_S_contig1222.1872.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1899bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1222:6807..17160+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |