mRNA_Ecto-sp13_S_contig12219.1869.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig12219.1869.1 vs. uniprot
Match: Q8QN80_ESV1K (EsV-1-210 n=1 Tax=Ectocarpus siliculosus virus 1 (isolate New Zealand/Kaikoura/1988) TaxID=654926 RepID=Q8QN80_ESV1K) HSP 1 Score: 856 bits (2212), Expect = 4.290e-311 Identity = 443/512 (86.52%), Postives = 471/512 (91.99%), Query Frame = 1
Query: 1 CLITSATAFKRSGKKSTLLSKTMDSIMIDATTGVVAVKTLVWHIQPQLHSSSVLKGVHRALEDAGASMETSLMNGRYTKTATVDTCCTILDHMRGSFWNQWRQSSGLAFKRALREHVASVVSSGQVEQAHPPVQQAEEQYVEGVETKAVVLRKALRAMNIQGSVRVDERSGMVSDIDVIRMLCPEASSEYAAQMLKRILEREDSAGGNHSVQNTQHSAPLADRVHYLKINGDGHVTPVSDAPTAIEIIWLLPARAAREFRKQSADTIARVLGGDVSLCAEIEQRCARLQSTDEGRAYQSVMTGEAPSKKHKSLPEWFEYATSDQKSAYVAAKVKKSVVVTELEMHEVCKVGLESVGQFAGRDEIEYADRIRDTQRRASRADNLLGAPAPSPEDAGDSAMLIATPIDNSIDPETGMLIATHKVSASVRGPETSICVEAAKLGISTGERAGQVGKVAKRLYGQKYGEEANRNIPTRHTTFRGKPFVERAYFSRDADLIQEAIRIVCCPGQGSTP 1536
CL S TAFK S KST LSKTMDSI IDATTGVV VKTL+WHI PQLH+SSVLKGVHRAL+D+GASM+T+L+NGR TKTATV CC+ILD+MRG+ W+QWRQSSG AFK ALREHVASVVSSGQVEQAHPPVQQA+EQ+VEGVETKAVVLRK+LRAMNI+GSVRVDERSGMVSDIDVI+MLCPE + +YA LKRILER+ + N SAPLADRVHYLKING GHVTPVSDAPTAIEIIWLLPARAAREFRKQSADTIARVLGGDVSLCAEIEQRCARLQ+T+EGRAYQSVMTGEAP KKHKSLPEWFEYATSDQKSAYVAAKVKKSVVVTE+EMHE+CKVGLESVGQFAGRDEIEYADRIRDTQRRASRADNLLGAPAPSP GDSAMLIATPIDNSIDPETGMLIATHKVSASVRGPETSICVEAA+LGISTGERAGQVGKVAKRLYG++YGEEANR+IPTRHTTFRGKPFVER YFSRDADLIQ AIRIVCCPGQ STP
Sbjct: 2 CLTISTTAFKSSRNKSTALSKTMDSITIDATTGVVGVKTLIWHIMPQLHTSSVLKGVHRALQDSGASMDTTLINGRLTKTATVGLCCSILDNMRGTKWDQWRQSSGPAFKDALREHVASVVSSGQVEQAHPPVQQADEQHVEGVETKAVVLRKSLRAMNIEGSVRVDERSGMVSDIDVIKMLCPEKNDDYAKIALKRILERQQQEADH----NDSDSAPLADRVHYLKINGVGHVTPVSDAPTAIEIIWLLPARAAREFRKQSADTIARVLGGDVSLCAEIEQRCARLQNTEEGRAYQSVMTGEAPPKKHKSLPEWFEYATSDQKSAYVAAKVKKSVVVTEIEMHEICKVGLESVGQFAGRDEIEYADRIRDTQRRASRADNLLGAPAPSPAVVGDSAMLIATPIDNSIDPETGMLIATHKVSASVRGPETSICVEAARLGISTGERAGQVGKVAKRLYGERYGEEANRDIPTRHTTFRGKPFVERTYFSRDADLIQRAIRIVCCPGQVSTP 509
BLAST of mRNA_Ecto-sp13_S_contig12219.1869.1 vs. uniprot
Match: D8LPL9_ECTSI (EsV-1-210 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPL9_ECTSI) HSP 1 Score: 823 bits (2126), Expect = 5.340e-298 Identity = 430/512 (83.98%), Postives = 456/512 (89.06%), Query Frame = 1
Query: 1 CLITSATAFKRSGKKSTLLSKTMDSIMIDATTGVVAVKTLVWHIQPQLHSSSVLKGVHRALEDAGASMETSLMNGRYTKTATVDTCCTILDHMRGSFWNQWRQSSGLAFKRALREHVASVVSSGQVEQAHPPVQQAEEQYVEGVETKAVVLRKALRAMNIQGSVRVDERSGMVSDIDVIRMLCPEASSEYAAQMLKRILEREDSAGGNHSVQNTQHSAPLADRVHYLKINGDGHVTPVSDAPTAIEIIWLLPARAAREFRKQSADTIARVLGGDVSLCAEIEQRCARLQSTDEGRAYQSVMTGEAPSKKHKSLPEWFEYATSDQKSAYVAAKVKKSVVVTELEMHEVCKVGLESVGQFAGRDEIEYADRIRDTQRRASRADNLLGAPAPSPEDAGDSAMLIATPIDNSIDPETGMLIATHKVSASVRGPETSICVEAAKLGISTGERAGQVGKVAKRLYGQKYGEEANRNIPTRHTTFRGKPFVERAYFSRDADLIQEAIRIVCCPGQGSTP 1536
CLI S TAFK S KST LSK MDSIMIDATTGVV VKTL+WHI P+LHSSSVLKGVHRALE +GASM+ +L+NGR+TKTATVD CC ILD M G+ W QWRQSSG AFK ALRE VASVVSSGQVEQAHPPVQQAEE GVE KAVVLRKALRAMNI+GSVRVDE +GM+SDIDVI MLCP AS E AA ML R+LE+E + G N+ LADR+ +KING G+ TPVSDAPTAIEIIWLLPARAAREFRKQSADTIARVLGGDVSLCAEIEQRCARLQ+T++GRAYQSVMTG+AP+KKHKSLPEWFEYATSDQKSAYVAAKVKKSVVVTELEMHEVCKVGLESVGQFAGRDEIEYADRIRDTQRRASRADNLLGAPAPSP D GDS+ LIATP DNSIDPETG LIATHKVSASVRGPETSICVEAAKLGISTGERAGQVGKVAKRLYGQKYGEEANR+IPTRHTTFRGKPFVER YFSRDADLIQ+AIRIVCCPGQ STP
Sbjct: 2 CLIISTTAFKSSRNKSTALSKKMDSIMIDATTGVVGVKTLIWHIMPELHSSSVLKGVHRALEGSGASMDRTLINGRFTKTATVDLCCDILDKMSGASWQQWRQSSGPAFKNALRERVASVVSSGQVEQAHPPVQQAEE----GVEKKAVVLRKALRAMNIEGSVRVDENTGMLSDIDVINMLCPGASPEDAAHMLTRVLEKEAAGGANNHGPTVHGPVALADRIKRIKINGKGNPTPVSDAPTAIEIIWLLPARAAREFRKQSADTIARVLGGDVSLCAEIEQRCARLQNTEDGRAYQSVMTGQAPTKKHKSLPEWFEYATSDQKSAYVAAKVKKSVVVTELEMHEVCKVGLESVGQFAGRDEIEYADRIRDTQRRASRADNLLGAPAPSPGDVGDSSTLIATPFDNSIDPETGKLIATHKVSASVRGPETSICVEAAKLGISTGERAGQVGKVAKRLYGQKYGEEANRDIPTRHTTFRGKPFVERTYFSRDADLIQQAIRIVCCPGQVSTP 509
BLAST of mRNA_Ecto-sp13_S_contig12219.1869.1 vs. uniprot
Match: Q8QN79_ESV1K (EsV-1-211 n=2 Tax=root TaxID=1 RepID=Q8QN79_ESV1K) HSP 1 Score: 525 bits (1353), Expect = 1.050e-180 Identity = 279/497 (56.14%), Postives = 362/497 (72.84%), Query Frame = 1
Query: 55 LSKTMDSIMIDATTGVVAVKTLVWHIQPQLHSSSVLKGVHRALEDA-GASMETSLMNGRYTKTATVDTCCTILDHMRGSFWNQWRQSSGLAFKRALREHVASVVSSGQVEQAHPPVQQAEEQYVEGVETKAVVLRKALRAMNIQGSVRVDERSGMVSDIDVIRMLCPEASSEYAAQMLKRILEREDSAGGNHSVQNTQHSAPLADRVHYLKINGDGHVTPVSDAPTAIEIIWLLPARAAREFRKQSADTIARVLGGDVSLCAEIEQRCARLQSTDEGRAYQSVMTGEAPSKKHKS-LPEWFEYATSDQKSAYVAAKV-------KKSVVVTELEMHEVCKVGLESVGQFAGRDEIEYADRIRDTQRRASRADNLLGAPAPSPEDAGDSAMLIATPIDNSIDPETGMLIATHKVSASVRGPETSICVEAAKLGISTGERAGQVGKVAKRLYGQKYGEEANRNIPTRHTTFRGKPFVERAYFSRDADLIQEAIRIVCCP 1518
++ +++I+IDA++G VAVK+++ +I P L S +LK VHR L D G M T LMNGR AT++ C ILD M G W +WR+ SG AFK+ALRE V SV SS Q EQ + V K VL+ ALR++NI GSVR+D+ G S ID R++CP ASS YAAQM R+LE+E GGN +Q+ QH P+ADRV Y++ING G+VTPVSDA T +EIIWLLP+ AA+EFR+QSA+TI RVLGGD+SLC EIEQRCARL+ST+EGRAYQS +T + P+KK ++ +P WFEYAT+++K AY++ + KK++V+ E+++ + CK L+SVGQF RDEIE+ADRI+D QRRA+R DN++ A AP+ D ++ +A P+D++IDPETG+L AT K S SVRGPETSICVEA K+GIS GE+AGQVGKV KRLY ++YG+EA RNIP R TTFRGKPF E Y++RD+DLIQ IRIVC P
Sbjct: 1 MNNNINNIVIDASSGDVAVKSMIKNIMPNLSESGILKTVHRVLGDYNGPKMSTRLMNGRLACAATLELCFDILDKMTGPPWRKWREESGNAFKKALRERVESVRSSSQTEQLXXXXXXXXXXPTQ-VGIKTAVLQNALRSININGSVRIDDGLGKASIIDTTRLVCPGASSAYAAQMFTRVLEKERDDGGNSFMQDAQHPTPIADRVDYIRINGHGNVTPVSDAKTIVEIIWLLPSGAAKEFRRQSAETICRVLGGDISLCGEIEQRCARLRSTEEGRAYQSFVTDQGPAKKQRAAMPAWFEYATAEEKRAYISIEATTSIVLAKKALVLGEIDVFKTCKEELKSVGQFDQRDEIEFADRIKDVQRRATRVDNMITA-APT-VDTSPVSVCVAMPVDDTIDPETGLLTATPKCSPSVRGPETSICVEAGKMGISVGEKAGQVGKVVKRLYSERYGQEAGRNIPKRSTTFRGKPFSENTYYARDSDLIQRGIRIVCAP 494
BLAST of mRNA_Ecto-sp13_S_contig12219.1869.1 vs. uniprot
Match: A0A6H5JJP2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJP2_9PHAE) HSP 1 Score: 498 bits (1282), Expect = 3.610e-160 Identity = 299/570 (52.46%), Postives = 332/570 (58.25%), Query Frame = 1
Query: 67 MDSIMIDATTGVVAVKTLVWHIQPQLHSSSVLKGVHRALEDAGASMETSLMNGRYTKTATVDTCCTILDHMRGSFWNQWRQSSGLAFKRALREHVASVVSSGQVEQAHPPVQQAEEQYVEGVETKAVVLRKALRAMNIQGSVRVDERSGMVSDIDVIRMLCPEASSEYAAQMLKRILEREDSAGGNHSVQNTQHSAPLADRVHYLKINGDGHVTPVSDAPTAIEIIWLLPARAAREFR-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KQSADTIARVLGGDVSLCAEIEQRCARLQSTDEGRAYQSVMTGEAPSKKHKSLPEWFEYATSDQKSAYVAAKVKKSVVVTELEMHEVCKVGLESVGQFAGRDEIEYADRIRDTQRRASRADNLLGAPAPSP---EDAGDSAMLIA 1206
MD+IMIDATTGVV VKTL+WHI PQLHSSSVLKGVHRALED+GASM+T+L+NGR+TKTATVD CC+ILD M+G+ W+QWRQSSGL FKRALRE VASVVSSGQVEQAHPPVQQAEEQ+VEGV TKAV LRKALRAMNIQGSVRVDERSG VS IDVI+MLC ASSEYAAQMLKR+LER+D + RV Y+KI+G G+ +PV+D T +EIIW+LP ++REFR KQSADTIARVLGGDVSLCAEIEQRCARLQ T+EGRAYQS MTGEAP KKH SLPEWFEYAT+DQKSAYV A+VKKSVVVTE+EMHEVCKVGLESVGQFAGRD+IE+ADRIRDTQRRASRADNLLGAPAPSP ED G + +L A
Sbjct: 1 MDTIMIDATTGVVGVKTLIWHIMPQLHSSSVLKGVHRALEDSGASMDTTLINGRFTKTATVDLCCSILDRMKGNQWDQWRQSSGLVFKRALRERVASVVSSGQVEQAHPPVQQAEEQHVEGVGTKAVALRKALRAMNIQGSVRVDERSGRVSGIDVIKMLCTGASSEYAAQMLKRVLERDD------------REPSIKSRVSYIKIDGSGNKSPVTDFNTLVEIIWMLPTGSSREFRRKSAETICRVMGGDLSLCRQIEQNALGWNCVEGGEAIQQALLRPVKYKENCVTERVRECVVRDALASLVGGTTEVETPSGYIDVLSETEVIEVKYYRQWKDGLGQVLAYQSHYPRLARRLHLFAHTGDRDTDKYCELAKAIAFKSSRKKSTAASKTMDSPEKNDAYAKIGFQRILEKQQQEANRKFRKQSADTIARVLGGDVSLCAEIEQRCARLQVTEEGRAYQSFMTGEAPPKKHTSLPEWFEYATNDQKSAYVTAEVKKSVVVTEIEMHEVCKVGLESVGQFAGRDKIEFADRIRDTQRRASRADNLLGAPAPSPASPEDVGLTTLLRA 558
BLAST of mRNA_Ecto-sp13_S_contig12219.1869.1 vs. uniprot
Match: A0A6H5K200_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K200_9PHAE) HSP 1 Score: 453 bits (1166), Expect = 2.370e-152 Identity = 258/504 (51.19%), Postives = 339/504 (67.26%), Query Frame = 1
Query: 55 LSKTMDSIMIDATTGVVAVKTLVWHIQPQLHSSSVLKGVHRALEDA-GASMETSLMNGRYTKTATVDTCCTILDHMRGSFWNQWRQSSGLAFKRALREHVASVVSSGQVEQAH---PPVQQAEEQYVEGVETKAVVLRKALRAMNIQGSVRVDERSGMVSDIDVIRMLCPEASSEYAAQMLKRILEREDSAGGNHSVQNTQHSAPLADRVHYLKINGDGHVTPVSDAPTAIEIIWLLPARAAREFRKQSADTIARVLGGDVSLCAEIEQRCARLQSTDEGRAYQSVMTGEAPSKKHKS-LPEWFEYATSDQKSAYVAAKV-------KKSVVVTELEMHEVCKVGLESVGQFAGRDEIEYADRIRDTQRRASRADNLLGAPAPSPEDAGDSAMLIATPIDNSIDPETGMLIA-THKVSA---SVRGPETSICVEAAKLGISTGERAGQVGKVAKRLYGQKYGEEANRNIPTRHTTFRGKPFVERAYFSRDADLIQEAIRIVCCP 1518
++ +++I+IDA++G VAVK+++ +I P L +LK VHR L D G M T LMNGR AT++ C ILD M G W +WR+ SG AFK AL E V SV SS Q EQ PP Q ++ G+ T VL+KALR++NI GSVR+D+ G S ID R++C A S YAAQM R+LE E + GG+ ++ Q P+ADRV Y++ING G VTPVSD+ T +EIIWLLP+ +A+EFR+QSA+TI RVLGGD+SLC EIEQRCARLQST+EGRAYQS +T + P+KK ++ +P WFEYAT+++K AY++ + KK++V+ ++++ E CK L SVGQF DEIE+ADRI+D QRRA R DN++ A AP+ D ++ A P+D++IDPETG T KV SVRGPETSICVEA K+G S Y ++YG+EA R IP R TTFRGKPF + Y++RD+DLIQ AIRIVC P
Sbjct: 1 MNNNINNIVIDASSGDVAVKSMIKNIMPNLSEGGILKTVHRVLGDYNGPKMSTRLMNGRLACAATLELCYEILDKMSGPPWRKWREESGNAFKEALCERVESVRSSSQTEQFQLQSPPQPQPPQKV--GITT--AVLQKALRSININGSVRIDDGCGKESIIDTTRLVCRGAYSAYAAQMFTRVLEEERNDGGSSFMRGEQTPTPIADRVDYIRINGHGKVTPVSDSKTIVEIIWLLPSGSAKEFRRQSAETICRVLGGDISLCGEIEQRCARLQSTEEGRAYQSFVTDQGPAKKQRAAMPAWFEYATAEEKRAYISIEATTSIVLAKKALVLRDVDVFETCKEKLNSVGQFDEGDEIEFADRIKDIQRRAKRVDNMITA-APA-VDTSPISVCAAMPVDDTIDPETGEKAGQTGKVVKRLPSVRGPETSICVEAGKMGSSVXXXXXXXXXXXXXXYSERYGQEAGRKIPKRSTTFRGKPFSGKTYYARDSDLIQRAIRIVCAP 498
BLAST of mRNA_Ecto-sp13_S_contig12219.1869.1 vs. uniprot
Match: A0A6H5L5N7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5N7_9PHAE) HSP 1 Score: 443 bits (1140), Expect = 1.210e-144 Identity = 252/486 (51.85%), Postives = 329/486 (67.70%), Query Frame = 1
Query: 55 LSKTMDSIMIDATTGVVAVKTLVWHIQPQLHSSSVLKGVHRALEDA-GASMETSLMNGRYTKTATVDTCCTILDHMRGSFWNQWRQSSGLAFKRALREHVASVVSSGQVEQAHPPVQQAEEQYVEGVETKAVVLRKALRAMNIQGSVRVDERSGMVSDIDVIRMLCPEASSEYAAQMLKRILEREDSAGGNHSVQNTQHSAPLADRVHYLKINGDGHVTPVSDAPTAIEIIWLLPARAAREFRKQSADTIARVLGGDVSLCAEIEQRCARLQSTDEGRAYQSVMTGEAPSKKHKS-LPEWFEYATSDQKSAYVAAKV-------KKSVVVTELEMHEVCKVGLESVGQFAGRDEIEYADRIRDTQRRASRADNLLGAPAPSPEDAGDSAMLIATPIDNSIDPETGMLIATHKVSASVRGPETSICVEAAKLGISTGERAGQVGKVAKRLYGQKYGEEANRNIPTRHTTFRGKPFVERAYFSRDADL 1485
++ +++I+IDA++G VAVK+++ +I P L S +LK VHR L D G M T LMNGR AT++ C ILD M G W +WR SG AFK ALRE V SV S+ Q EQ + V K VL+ ALR++NI GSVR+D+ G S ID +R++ P AS EYAAQM R+L++E GN SV++ Q P+ADRV Y++ING G VTPVSDA T +EIIWLLP+ AA+EFR+QSA+TI RVLGGD+SLC EIEQRCARLQST+EGRAYQS MT + P+KK ++ +P FEYAT+++K AY++ + KK++V+ +++ E CK L+SVGQF R +IE+ADRI+D QRRA+R DN++ A AP+ D ++ +A P+D++ID ETG+LI T K S SVRGPETSICVEA K+GI GE+AGQVGKV KRL TTFRGKPF E Y++ A L
Sbjct: 1 MNNNINNIVIDASSGDVAVKSMIKNIMPNLSESGILKTVHRVLGDCNGPKMSTRLMNGRLACAATLELCFEILDTMTGPPWRKWRSESGNAFKGALRERVESVRSASQTEQLXXXXXXXXX-XPQQVGIKTAVLQNALRSINIHGSVRIDDGLGKASIIDTVRLISPTASPEYAAQMFTRVLQKERGDCGNTSVRDEQTPTPIADRVDYIRINGRGKVTPVSDAKTIVEIIWLLPSGAAKEFRRQSAETICRVLGGDISLCGEIEQRCARLQSTEEGRAYQSFMTDQGPAKKQRAAMPARFEYATAEEKRAYISIEATTSKVLAKKALVLRYIDVFETCKEKLKSVGQFDERAQIEFADRIKDVQRRATRVDNMITA-APA-VDTSPVSVCVAMPVDDTIDTETGLLIETPKCSPSVRGPETSICVEAGKMGIGVGEKAGQVGKVVKRL-----------------TTFRGKPFSENTYYALFAVL 466
BLAST of mRNA_Ecto-sp13_S_contig12219.1869.1 vs. uniprot
Match: A0A6H5JG13_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG13_9PHAE) HSP 1 Score: 286 bits (732), Expect = 1.890e-87 Identity = 192/504 (38.10%), Postives = 280/504 (55.56%), Query Frame = 1
Query: 67 MDSIMIDATTGVVAVKTLVWHIQPQLHSSSVLKGVHRALEDA-GASMETSLMNGRYTKTATVDTCCTILDHMRGSFWNQWRQSSGLAFKRALREHVASVVSSGQVEQAHPPVQQAEEQYV---EGVETKAVVLRKALRAMNIQGSVRVDERSGMVSDIDVIRMLCPEASSEYAAQMLKRILEREDSAGGNHSVQNTQHSAPLADRVHYLKINGDGHVTPVSDAPTAIEIIWLLPARAAREFRKQSADTIARVLGGDVSLCAEIEQRCARLQSTDEGRAYQSVMTGE-----APSKKHKSLPEWFEYATSDQKSAYVAA-------KVKKSVVVTELEMHEVCKVGLESVGQFAGRDEIEYADRIRDTQRRASRADNLLGAPA------PSPEDAGDSAMLIATPIDNSIDPETGMLIATHKVSASVRGPETSICVEAAKLGISTGERAGQVGKVAKRLYGQKYGEEANRNIPTR-HTTFRGKPFVERAYFSRDADLIQEAIRIV 1509
MD+I++DA G V V +++ +P+LHS SVL V A+++ G + ++ GR T A++DTC ILD+M G W WR + G +FK +L +HVA+ G + V QA E E ETK L+KA R +NI GSVR+DE SG S +DVIR+L P S + A +ML R+LE+++ + + +++G +P+ + LP RAAR FR+QSA+ I RVLGGDVSLC EIEQRCARL ST EGR+ Q+ M+GE P+K+ + PE E+AT +Q Y+ A +++++V +E+ + K E + R +IE +DR+ D Q+R R P S ++A+++AT ++DP G T S VRG E SI + A ++G+S G R G VGK K LY ++YG+ A NIP R +T ++G+PF E YF+RD DL++ AIR+V
Sbjct: 1 MDNIVVDAA-GDVGVSSMIKAAKPELHSGSVLCSVRSAMKNFDGPGLTPKMVKGRTTTMASLDTCKYILDNMPGPRWVMWRSTQGNSFKESLTQHVAATHVQGVEDNVVEGVAQAAEAAEVEQEVAETKGSTLKKAFRTLNIDGSVRIDEASGKASVMDVIRLLSPGVSLDNARKMLSRLLEKDE----------------VTELEQRGQLSGPQTHSPIMCTTSRSTEKGGLP-RAARSFRRQSAEVITRVLGGDVSLCGEIEQRCARLGSTSEGRSNQAFMSGENGTEEQPAKRTRVGPEIMEFATEEQYEKYIKAGLQQEMVNIQQAIVKSEISLVMSLKEAFEKIQPLEPRQKIELSDRLSDVQKRYFRGGEESAMPVRDVRAITSSSTPAENAVVVAT----AVDPGHGT--PTPNCSRDVRGAEVSIAMIATEMGVSVGGRGGLVGKNIKALYAERYGQNAANNIPKRKNTVYQGRPFKENMYFTRDRDLVERAIRMV 480
BLAST of mRNA_Ecto-sp13_S_contig12219.1869.1 vs. uniprot
Match: B5LWM4_9PHYC (Uncharacterized protein n=1 Tax=Feldmannia species virus TaxID=39420 RepID=B5LWM4_9PHYC) HSP 1 Score: 278 bits (712), Expect = 8.260e-86 Identity = 169/360 (46.94%), Postives = 222/360 (61.67%), Query Frame = 1
Query: 487 SVRVDERSGMVSDIDVIRMLCPEASSEYAAQMLKRILEREDSAGGNHSVQNTQHSAP-LADRVHYLKINGDGHVTPVSDAPTAIEIIWLLPARAAREFRKQSADTIARVLGGDVSLCAEIEQRCARLQSTDEGRAYQSV------MTGEAPSK----KHKSLPEWFEYATSDQKSAYVAAKVKKSVVVTELEMHEVCKVGLESVGQFAGRDEIEYADRIRDTQRRASRADNLLGAPAPSPEDAGDSAMLIATPIDNSIDPETGMLIATHKVSASVRGPETSICVEAAKLGISTGERAGQVGKVAKRLYGQKYGEEANRNIPTRHTTFRGKPFVERAYFSRDADLIQEAIRIVCCPGQGST 1533
++RVD+ + + S ID IRM +LE DS+ N S+ S P L ++ LK+NG G TPV+DA T IEI+WLLP R A FR Q I R+LGGD SL +EIE R A L T+EGRA Q +T + P + + P WF+ AT+++K A+ + V K++V E+EM++ CK LESVGQF RD IE+ DR+RD QRRA RA N++ + +P D +A P+D++ID TG+ +AT + S SVRG ETSIC EAAKLGI GE+ G++GK R Y ++YG EA NIP R TT+RGKPF E Y+SRDADL+QEAIRIVC P + ST
Sbjct: 29 TIRVDKNTKLGSVIDTIRM----------------VLEC-DSSNANTSLGRLVLSHPGLGEKYTQLKVNGRGKPTPVADAKTLIEIVWLLPGRRAHAFRCQRVGKICRLLGGDTSLVSEIEARHATLTGTEEGRATQEFFLNDNHVTIDQPDQVKELRSGEEPSWFKNATAEEKRAFASTMVNKAIVSEEVEMYDFCKAKLESVGQFTTRDMIEFGDRVRDAQRRALRAGNMMTS---TPVDDTVVISAVARPVDDTIDSATGLPLATPECSESVRGVETSICNEAAKLGICVGEKGGEIGKELIRRYTKRYGVEAGLNIPKRPTTYRGKPFNENCYWSRDADLVQEAIRIVCSPEKKST 368
BLAST of mRNA_Ecto-sp13_S_contig12219.1869.1 vs. uniprot
Match: B5LW93_9PHYC (Uncharacterized protein n=1 Tax=Feldmannia species virus TaxID=39420 RepID=B5LW93_9PHYC) HSP 1 Score: 271 bits (693), Expect = 5.820e-82 Identity = 179/509 (35.17%), Postives = 268/509 (52.65%), Query Frame = 1
Query: 67 MDSIMIDATTGVVAVKTLVWHIQPQLHSSSVLKGVHRALEDAGASMETSLMNGRYTKTATVDTCCTILDHMRGSFWNQWRQSSGLAFKRALREHV----ASVVSSGQVEQAHPPVQQAEEQYVEGVETKAVVLRKALRAMNIQGSVRVDERSGMVSDIDVIRMLCPEASSEYAAQMLKRILEREDSAGGNHSVQNTQHSAPLADRVHYLKINGDGHVTPVSDAPTAIEIIWLLPARAAREFRKQSADTIARVLGGDVSLCAEIEQRCARLQSTDEGRAYQSVMTGEAPSKKHKSLPEWFEYATSDQKSAYVAAKVKKSVVV--------------------------TELEMHEVCKVGLESVGQFA-GRDEIEYADRIRDTQRRASRADNLLGAPAPSPEDAGDSAMLIATPIDNSIDPETGMLIATHKVSASVRGPETSICVEAAKLGISTGERAGQVGKVAKRLYGQKYGEEANRNIPTRHTTFRGKPFVERAYFSRDADLIQEAI 1500
MDSI++D +G++ V +++ I P + S++ + V + L D+ + R ++ T+D ++DH++ ++WR ++ FK LR HV A +V G E VETKA VL+ LR++NI GS+RVDE +G+ S ID+++++CP+ YA L R+LE + +AD V LKING GHVTPV+DA T EIIWLLP RAAREFR+QSA+ + RVLGGD +LC EIE+R LQST EGRA+Q+ G +K + E E+A+S+ +V KV+ + V +EL + K G ++V + R +IE +D + D QRRA R + ++ ++DP G+ + T A++RG E SI + + ++G+ G RAG GK K LY +YG +A NIP R T F+G+P+ E Y++RD DL+Q+AI
Sbjct: 1 MDSIIVDRASGLIGVSSIMKQIVPTVSDSTMWRMVEKTLRDSAVPKR----HLRKSRMLTLDEAFYLVDHVQFPLSSEWRAANADTFKENLRSHVQAKTAPLVGDGGGE---------------SVETKASVLQNCLRSVNIIGSIRVDEDTGLGSLIDIVKIVCPDMCKVYAKTTLARVLE--------------EWPHHVADCVKRLKINGRGHVTPVADAKTIAEIIWLLPGRAAREFRRQSAEIVMRVLGGDTTLCKEIEERSVGLQSTREGRAFQNFALGGESGEKKRLGGELMEHASSEDYERFVKMKVEHEMCVMEQXXXXXXXXXXXXXXXXQEEGKVDSELRIVASLKRGFDAVNSLSESRHKIELSDIVSDIQRRALRK---------------------SVSVETAVDP--GVSVPTPDCPANIRGEEVSIAMVSGEMGVHLGGRAGTAGKKLKVLYMARYGADAANNIPKRATIFQGRPYRENTYYARDKDLVQQAI 453
BLAST of mRNA_Ecto-sp13_S_contig12219.1869.1 vs. uniprot
Match: Q6XM54_9PHYC (FirrV-1-A33 n=1 Tax=Feldmannia irregularis virus a TaxID=231992 RepID=Q6XM54_9PHYC) HSP 1 Score: 228 bits (581), Expect = 1.920e-65 Identity = 171/496 (34.48%), Postives = 253/496 (51.01%), Query Frame = 1
Query: 67 MDSIMIDATTGVVAVKTLVWHIQPQLHSSSVLKGVHRALEDAGASMETSLMNGRYTKTATVDTCCTILDHMRGSFWNQWRQSSGLAFKRALREHVASVVSSGQVEQAHPPVQQAEEQYVEGVETKAVVLRKALRAMNIQGSVRVDERSGMVSDIDVIRMLCPEASSEYAAQMLKRILEREDSAGGNHSVQNTQHSAPL--ADRVHYLKINGDGHVTPVSDAPTAIEIIWLLPARAAREFRKQSADTIARVLGGDVSLCAEIEQRCARLQSTDEGRAYQSVMTGEAPSKKHKSLPEWFEYATSDQK----SAYVAAKVKKSVVVTELEMHEVCKVGLES---VGQFAGRDEIEYADR----IRDTQRRASRADNLLGAPAPSPEDAGDSAMLIATPIDNSIDPETGMLIATHKVSASVRGPETSICVEAAKLGISTGER-AGQVGKVAKRLYGQKYGEEANRN-IPTRHTTFRGKPFVERAYFSRDADLIQEAIRIV 1509
M++I +D+ TG+V ++V ++ P L +S V K A + A S G + +VD C ++ + QW F+R L ++V + VE+K +++ALRA+NIQGS+RVDE S M S IDVI+++CPE S +A + L +++ +D GN ++ + PL ++RV ++ING G VTPV+DA T I IIWLLP RA FR QSA+ IARVLGGD+ L EI+Q+CA+LQ T EGRA+Q M AP K + + + FE+ ++ + A K+K + + E+ K + V Q ++E DR IRD +R G+ A P +L+ DP T TH + A RG ET+I V +AK+ + +G+VGK+ ++ Y KY N N R T G+P +E Y+ RDAD+I+EAIR V
Sbjct: 1 MENIFVDSATGLVGASSVVQYVLPGLSASFVRKVTKEAADKAQLSFSKIKHGGTFVNALSVDDCLEVMANSSQDGIKQWYARKAETFRRDLDDYVTRKTTQ--------------------VESKESCIQRALRALNIQGSIRVDEESRMGSVIDVIKLICPEKSEFHAYKTLSNLIDDDDKCIGN-KFKSDDSTIPLRLSERVKKIQINGRGRVTPVADAKTLIYIIWLLPGRAVAHFRAQSAEIIARVLGGDLRLAQEIQQQCAKLQETPEGRAFQDFM---APDAKKQKM-DMFEFLGPSKRVEIAEQFYAEKLKAIQQERQAKEQELKKKSITDIIDVYQSLKNIDVEIDDRTKVEIRDKVSILTRQMEGQGSHASPP-------LLLCE------DPST----PTHVLDAERRGQETNIVVVSAKMNVRVPPALSGKVGKLMRKKYINKYKLPTNWNDFIKRQTILHGRPCLENTYYERDADIIEEAIREV 454 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12219.1869.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig12219.1869.1 >prot_Ecto-sp13_S_contig12219.1869.1 ID=prot_Ecto-sp13_S_contig12219.1869.1|Name=mRNA_Ecto-sp13_S_contig12219.1869.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=513bp CLITSATAFKRSGKKSTLLSKTMDSIMIDATTGVVAVKTLVWHIQPQLHSback to top mRNA from alignment at Ecto-sp13_S_contig12219:3174..4712- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig12219.1869.1 ID=mRNA_Ecto-sp13_S_contig12219.1869.1|Name=mRNA_Ecto-sp13_S_contig12219.1869.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1539bp|location=Sequence derived from alignment at Ecto-sp13_S_contig12219:3174..4712- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig12219:3174..4712- >mRNA_Ecto-sp13_S_contig12219.1869.1 ID=mRNA_Ecto-sp13_S_contig12219.1869.1|Name=mRNA_Ecto-sp13_S_contig12219.1869.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1539bp|location=Sequence derived from alignment at Ecto-sp13_S_contig12219:3174..4712- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |