mRNA_Ecto-sp13_S_contig12219.1869.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig12219.1869.1
Unique NamemRNA_Ecto-sp13_S_contig12219.1869.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig12219.1869.1 vs. uniprot
Match: Q8QN80_ESV1K (EsV-1-210 n=1 Tax=Ectocarpus siliculosus virus 1 (isolate New Zealand/Kaikoura/1988) TaxID=654926 RepID=Q8QN80_ESV1K)

HSP 1 Score: 856 bits (2212), Expect = 4.290e-311
Identity = 443/512 (86.52%), Postives = 471/512 (91.99%), Query Frame = 1
Query:    1 CLITSATAFKRSGKKSTLLSKTMDSIMIDATTGVVAVKTLVWHIQPQLHSSSVLKGVHRALEDAGASMETSLMNGRYTKTATVDTCCTILDHMRGSFWNQWRQSSGLAFKRALREHVASVVSSGQVEQAHPPVQQAEEQYVEGVETKAVVLRKALRAMNIQGSVRVDERSGMVSDIDVIRMLCPEASSEYAAQMLKRILEREDSAGGNHSVQNTQHSAPLADRVHYLKINGDGHVTPVSDAPTAIEIIWLLPARAAREFRKQSADTIARVLGGDVSLCAEIEQRCARLQSTDEGRAYQSVMTGEAPSKKHKSLPEWFEYATSDQKSAYVAAKVKKSVVVTELEMHEVCKVGLESVGQFAGRDEIEYADRIRDTQRRASRADNLLGAPAPSPEDAGDSAMLIATPIDNSIDPETGMLIATHKVSASVRGPETSICVEAAKLGISTGERAGQVGKVAKRLYGQKYGEEANRNIPTRHTTFRGKPFVERAYFSRDADLIQEAIRIVCCPGQGSTP 1536
            CL  S TAFK S  KST LSKTMDSI IDATTGVV VKTL+WHI PQLH+SSVLKGVHRAL+D+GASM+T+L+NGR TKTATV  CC+ILD+MRG+ W+QWRQSSG AFK ALREHVASVVSSGQVEQAHPPVQQA+EQ+VEGVETKAVVLRK+LRAMNI+GSVRVDERSGMVSDIDVI+MLCPE + +YA   LKRILER+     +    N   SAPLADRVHYLKING GHVTPVSDAPTAIEIIWLLPARAAREFRKQSADTIARVLGGDVSLCAEIEQRCARLQ+T+EGRAYQSVMTGEAP KKHKSLPEWFEYATSDQKSAYVAAKVKKSVVVTE+EMHE+CKVGLESVGQFAGRDEIEYADRIRDTQRRASRADNLLGAPAPSP   GDSAMLIATPIDNSIDPETGMLIATHKVSASVRGPETSICVEAA+LGISTGERAGQVGKVAKRLYG++YGEEANR+IPTRHTTFRGKPFVER YFSRDADLIQ AIRIVCCPGQ STP
Sbjct:    2 CLTISTTAFKSSRNKSTALSKTMDSITIDATTGVVGVKTLIWHIMPQLHTSSVLKGVHRALQDSGASMDTTLINGRLTKTATVGLCCSILDNMRGTKWDQWRQSSGPAFKDALREHVASVVSSGQVEQAHPPVQQADEQHVEGVETKAVVLRKSLRAMNIEGSVRVDERSGMVSDIDVIKMLCPEKNDDYAKIALKRILERQQQEADH----NDSDSAPLADRVHYLKINGVGHVTPVSDAPTAIEIIWLLPARAAREFRKQSADTIARVLGGDVSLCAEIEQRCARLQNTEEGRAYQSVMTGEAPPKKHKSLPEWFEYATSDQKSAYVAAKVKKSVVVTEIEMHEICKVGLESVGQFAGRDEIEYADRIRDTQRRASRADNLLGAPAPSPAVVGDSAMLIATPIDNSIDPETGMLIATHKVSASVRGPETSICVEAARLGISTGERAGQVGKVAKRLYGERYGEEANRDIPTRHTTFRGKPFVERTYFSRDADLIQRAIRIVCCPGQVSTP 509          
BLAST of mRNA_Ecto-sp13_S_contig12219.1869.1 vs. uniprot
Match: D8LPL9_ECTSI (EsV-1-210 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPL9_ECTSI)

HSP 1 Score: 823 bits (2126), Expect = 5.340e-298
Identity = 430/512 (83.98%), Postives = 456/512 (89.06%), Query Frame = 1
Query:    1 CLITSATAFKRSGKKSTLLSKTMDSIMIDATTGVVAVKTLVWHIQPQLHSSSVLKGVHRALEDAGASMETSLMNGRYTKTATVDTCCTILDHMRGSFWNQWRQSSGLAFKRALREHVASVVSSGQVEQAHPPVQQAEEQYVEGVETKAVVLRKALRAMNIQGSVRVDERSGMVSDIDVIRMLCPEASSEYAAQMLKRILEREDSAGGNHSVQNTQHSAPLADRVHYLKINGDGHVTPVSDAPTAIEIIWLLPARAAREFRKQSADTIARVLGGDVSLCAEIEQRCARLQSTDEGRAYQSVMTGEAPSKKHKSLPEWFEYATSDQKSAYVAAKVKKSVVVTELEMHEVCKVGLESVGQFAGRDEIEYADRIRDTQRRASRADNLLGAPAPSPEDAGDSAMLIATPIDNSIDPETGMLIATHKVSASVRGPETSICVEAAKLGISTGERAGQVGKVAKRLYGQKYGEEANRNIPTRHTTFRGKPFVERAYFSRDADLIQEAIRIVCCPGQGSTP 1536
            CLI S TAFK S  KST LSK MDSIMIDATTGVV VKTL+WHI P+LHSSSVLKGVHRALE +GASM+ +L+NGR+TKTATVD CC ILD M G+ W QWRQSSG AFK ALRE VASVVSSGQVEQAHPPVQQAEE    GVE KAVVLRKALRAMNI+GSVRVDE +GM+SDIDVI MLCP AS E AA ML R+LE+E + G N+          LADR+  +KING G+ TPVSDAPTAIEIIWLLPARAAREFRKQSADTIARVLGGDVSLCAEIEQRCARLQ+T++GRAYQSVMTG+AP+KKHKSLPEWFEYATSDQKSAYVAAKVKKSVVVTELEMHEVCKVGLESVGQFAGRDEIEYADRIRDTQRRASRADNLLGAPAPSP D GDS+ LIATP DNSIDPETG LIATHKVSASVRGPETSICVEAAKLGISTGERAGQVGKVAKRLYGQKYGEEANR+IPTRHTTFRGKPFVER YFSRDADLIQ+AIRIVCCPGQ STP
Sbjct:    2 CLIISTTAFKSSRNKSTALSKKMDSIMIDATTGVVGVKTLIWHIMPELHSSSVLKGVHRALEGSGASMDRTLINGRFTKTATVDLCCDILDKMSGASWQQWRQSSGPAFKNALRERVASVVSSGQVEQAHPPVQQAEE----GVEKKAVVLRKALRAMNIEGSVRVDENTGMLSDIDVINMLCPGASPEDAAHMLTRVLEKEAAGGANNHGPTVHGPVALADRIKRIKINGKGNPTPVSDAPTAIEIIWLLPARAAREFRKQSADTIARVLGGDVSLCAEIEQRCARLQNTEDGRAYQSVMTGQAPTKKHKSLPEWFEYATSDQKSAYVAAKVKKSVVVTELEMHEVCKVGLESVGQFAGRDEIEYADRIRDTQRRASRADNLLGAPAPSPGDVGDSSTLIATPFDNSIDPETGKLIATHKVSASVRGPETSICVEAAKLGISTGERAGQVGKVAKRLYGQKYGEEANRDIPTRHTTFRGKPFVERTYFSRDADLIQQAIRIVCCPGQVSTP 509          
BLAST of mRNA_Ecto-sp13_S_contig12219.1869.1 vs. uniprot
Match: Q8QN79_ESV1K (EsV-1-211 n=2 Tax=root TaxID=1 RepID=Q8QN79_ESV1K)

HSP 1 Score: 525 bits (1353), Expect = 1.050e-180
Identity = 279/497 (56.14%), Postives = 362/497 (72.84%), Query Frame = 1
Query:   55 LSKTMDSIMIDATTGVVAVKTLVWHIQPQLHSSSVLKGVHRALEDA-GASMETSLMNGRYTKTATVDTCCTILDHMRGSFWNQWRQSSGLAFKRALREHVASVVSSGQVEQAHPPVQQAEEQYVEGVETKAVVLRKALRAMNIQGSVRVDERSGMVSDIDVIRMLCPEASSEYAAQMLKRILEREDSAGGNHSVQNTQHSAPLADRVHYLKINGDGHVTPVSDAPTAIEIIWLLPARAAREFRKQSADTIARVLGGDVSLCAEIEQRCARLQSTDEGRAYQSVMTGEAPSKKHKS-LPEWFEYATSDQKSAYVAAKV-------KKSVVVTELEMHEVCKVGLESVGQFAGRDEIEYADRIRDTQRRASRADNLLGAPAPSPEDAGDSAMLIATPIDNSIDPETGMLIATHKVSASVRGPETSICVEAAKLGISTGERAGQVGKVAKRLYGQKYGEEANRNIPTRHTTFRGKPFVERAYFSRDADLIQEAIRIVCCP 1518
            ++  +++I+IDA++G VAVK+++ +I P L  S +LK VHR L D  G  M T LMNGR    AT++ C  ILD M G  W +WR+ SG AFK+ALRE V SV SS Q EQ             + V  K  VL+ ALR++NI GSVR+D+  G  S ID  R++CP ASS YAAQM  R+LE+E   GGN  +Q+ QH  P+ADRV Y++ING G+VTPVSDA T +EIIWLLP+ AA+EFR+QSA+TI RVLGGD+SLC EIEQRCARL+ST+EGRAYQS +T + P+KK ++ +P WFEYAT+++K AY++ +        KK++V+ E+++ + CK  L+SVGQF  RDEIE+ADRI+D QRRA+R DN++ A AP+  D    ++ +A P+D++IDPETG+L AT K S SVRGPETSICVEA K+GIS GE+AGQVGKV KRLY ++YG+EA RNIP R TTFRGKPF E  Y++RD+DLIQ  IRIVC P
Sbjct:    1 MNNNINNIVIDASSGDVAVKSMIKNIMPNLSESGILKTVHRVLGDYNGPKMSTRLMNGRLACAATLELCFDILDKMTGPPWRKWREESGNAFKKALRERVESVRSSSQTEQLXXXXXXXXXXPTQ-VGIKTAVLQNALRSININGSVRIDDGLGKASIIDTTRLVCPGASSAYAAQMFTRVLEKERDDGGNSFMQDAQHPTPIADRVDYIRINGHGNVTPVSDAKTIVEIIWLLPSGAAKEFRRQSAETICRVLGGDISLCGEIEQRCARLRSTEEGRAYQSFVTDQGPAKKQRAAMPAWFEYATAEEKRAYISIEATTSIVLAKKALVLGEIDVFKTCKEELKSVGQFDQRDEIEFADRIKDVQRRATRVDNMITA-APT-VDTSPVSVCVAMPVDDTIDPETGLLTATPKCSPSVRGPETSICVEAGKMGISVGEKAGQVGKVVKRLYSERYGQEAGRNIPKRSTTFRGKPFSENTYYARDSDLIQRGIRIVCAP 494          
BLAST of mRNA_Ecto-sp13_S_contig12219.1869.1 vs. uniprot
Match: A0A6H5JJP2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJP2_9PHAE)

HSP 1 Score: 498 bits (1282), Expect = 3.610e-160
Identity = 299/570 (52.46%), Postives = 332/570 (58.25%), Query Frame = 1
Query:   67 MDSIMIDATTGVVAVKTLVWHIQPQLHSSSVLKGVHRALEDAGASMETSLMNGRYTKTATVDTCCTILDHMRGSFWNQWRQSSGLAFKRALREHVASVVSSGQVEQAHPPVQQAEEQYVEGVETKAVVLRKALRAMNIQGSVRVDERSGMVSDIDVIRMLCPEASSEYAAQMLKRILEREDSAGGNHSVQNTQHSAPLADRVHYLKINGDGHVTPVSDAPTAIEIIWLLPARAAREFR-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KQSADTIARVLGGDVSLCAEIEQRCARLQSTDEGRAYQSVMTGEAPSKKHKSLPEWFEYATSDQKSAYVAAKVKKSVVVTELEMHEVCKVGLESVGQFAGRDEIEYADRIRDTQRRASRADNLLGAPAPSP---EDAGDSAMLIA 1206
            MD+IMIDATTGVV VKTL+WHI PQLHSSSVLKGVHRALED+GASM+T+L+NGR+TKTATVD CC+ILD M+G+ W+QWRQSSGL FKRALRE VASVVSSGQVEQAHPPVQQAEEQ+VEGV TKAV LRKALRAMNIQGSVRVDERSG VS IDVI+MLC  ASSEYAAQMLKR+LER+D                +  RV Y+KI+G G+ +PV+D  T +EIIW+LP  ++REFR                                                                                                                                                                                           KQSADTIARVLGGDVSLCAEIEQRCARLQ T+EGRAYQS MTGEAP KKH SLPEWFEYAT+DQKSAYV A+VKKSVVVTE+EMHEVCKVGLESVGQFAGRD+IE+ADRIRDTQRRASRADNLLGAPAPSP   ED G + +L A
Sbjct:    1 MDTIMIDATTGVVGVKTLIWHIMPQLHSSSVLKGVHRALEDSGASMDTTLINGRFTKTATVDLCCSILDRMKGNQWDQWRQSSGLVFKRALRERVASVVSSGQVEQAHPPVQQAEEQHVEGVGTKAVALRKALRAMNIQGSVRVDERSGRVSGIDVIKMLCTGASSEYAAQMLKRVLERDD------------REPSIKSRVSYIKIDGSGNKSPVTDFNTLVEIIWMLPTGSSREFRRKSAETICRVMGGDLSLCRQIEQNALGWNCVEGGEAIQQALLRPVKYKENCVTERVRECVVRDALASLVGGTTEVETPSGYIDVLSETEVIEVKYYRQWKDGLGQVLAYQSHYPRLARRLHLFAHTGDRDTDKYCELAKAIAFKSSRKKSTAASKTMDSPEKNDAYAKIGFQRILEKQQQEANRKFRKQSADTIARVLGGDVSLCAEIEQRCARLQVTEEGRAYQSFMTGEAPPKKHTSLPEWFEYATNDQKSAYVTAEVKKSVVVTEIEMHEVCKVGLESVGQFAGRDKIEFADRIRDTQRRASRADNLLGAPAPSPASPEDVGLTTLLRA 558          
BLAST of mRNA_Ecto-sp13_S_contig12219.1869.1 vs. uniprot
Match: A0A6H5K200_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K200_9PHAE)

HSP 1 Score: 453 bits (1166), Expect = 2.370e-152
Identity = 258/504 (51.19%), Postives = 339/504 (67.26%), Query Frame = 1
Query:   55 LSKTMDSIMIDATTGVVAVKTLVWHIQPQLHSSSVLKGVHRALEDA-GASMETSLMNGRYTKTATVDTCCTILDHMRGSFWNQWRQSSGLAFKRALREHVASVVSSGQVEQAH---PPVQQAEEQYVEGVETKAVVLRKALRAMNIQGSVRVDERSGMVSDIDVIRMLCPEASSEYAAQMLKRILEREDSAGGNHSVQNTQHSAPLADRVHYLKINGDGHVTPVSDAPTAIEIIWLLPARAAREFRKQSADTIARVLGGDVSLCAEIEQRCARLQSTDEGRAYQSVMTGEAPSKKHKS-LPEWFEYATSDQKSAYVAAKV-------KKSVVVTELEMHEVCKVGLESVGQFAGRDEIEYADRIRDTQRRASRADNLLGAPAPSPEDAGDSAMLIATPIDNSIDPETGMLIA-THKVSA---SVRGPETSICVEAAKLGISTGERAGQVGKVAKRLYGQKYGEEANRNIPTRHTTFRGKPFVERAYFSRDADLIQEAIRIVCCP 1518
            ++  +++I+IDA++G VAVK+++ +I P L    +LK VHR L D  G  M T LMNGR    AT++ C  ILD M G  W +WR+ SG AFK AL E V SV SS Q EQ     PP  Q  ++   G+ T   VL+KALR++NI GSVR+D+  G  S ID  R++C  A S YAAQM  R+LE E + GG+  ++  Q   P+ADRV Y++ING G VTPVSD+ T +EIIWLLP+ +A+EFR+QSA+TI RVLGGD+SLC EIEQRCARLQST+EGRAYQS +T + P+KK ++ +P WFEYAT+++K AY++ +        KK++V+ ++++ E CK  L SVGQF   DEIE+ADRI+D QRRA R DN++ A AP+  D    ++  A P+D++IDPETG     T KV     SVRGPETSICVEA K+G S               Y ++YG+EA R IP R TTFRGKPF  + Y++RD+DLIQ AIRIVC P
Sbjct:    1 MNNNINNIVIDASSGDVAVKSMIKNIMPNLSEGGILKTVHRVLGDYNGPKMSTRLMNGRLACAATLELCYEILDKMSGPPWRKWREESGNAFKEALCERVESVRSSSQTEQFQLQSPPQPQPPQKV--GITT--AVLQKALRSININGSVRIDDGCGKESIIDTTRLVCRGAYSAYAAQMFTRVLEEERNDGGSSFMRGEQTPTPIADRVDYIRINGHGKVTPVSDSKTIVEIIWLLPSGSAKEFRRQSAETICRVLGGDISLCGEIEQRCARLQSTEEGRAYQSFVTDQGPAKKQRAAMPAWFEYATAEEKRAYISIEATTSIVLAKKALVLRDVDVFETCKEKLNSVGQFDEGDEIEFADRIKDIQRRAKRVDNMITA-APA-VDTSPISVCAAMPVDDTIDPETGEKAGQTGKVVKRLPSVRGPETSICVEAGKMGSSVXXXXXXXXXXXXXXYSERYGQEAGRKIPKRSTTFRGKPFSGKTYYARDSDLIQRAIRIVCAP 498          
BLAST of mRNA_Ecto-sp13_S_contig12219.1869.1 vs. uniprot
Match: A0A6H5L5N7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5N7_9PHAE)

HSP 1 Score: 443 bits (1140), Expect = 1.210e-144
Identity = 252/486 (51.85%), Postives = 329/486 (67.70%), Query Frame = 1
Query:   55 LSKTMDSIMIDATTGVVAVKTLVWHIQPQLHSSSVLKGVHRALEDA-GASMETSLMNGRYTKTATVDTCCTILDHMRGSFWNQWRQSSGLAFKRALREHVASVVSSGQVEQAHPPVQQAEEQYVEGVETKAVVLRKALRAMNIQGSVRVDERSGMVSDIDVIRMLCPEASSEYAAQMLKRILEREDSAGGNHSVQNTQHSAPLADRVHYLKINGDGHVTPVSDAPTAIEIIWLLPARAAREFRKQSADTIARVLGGDVSLCAEIEQRCARLQSTDEGRAYQSVMTGEAPSKKHKS-LPEWFEYATSDQKSAYVAAKV-------KKSVVVTELEMHEVCKVGLESVGQFAGRDEIEYADRIRDTQRRASRADNLLGAPAPSPEDAGDSAMLIATPIDNSIDPETGMLIATHKVSASVRGPETSICVEAAKLGISTGERAGQVGKVAKRLYGQKYGEEANRNIPTRHTTFRGKPFVERAYFSRDADL 1485
            ++  +++I+IDA++G VAVK+++ +I P L  S +LK VHR L D  G  M T LMNGR    AT++ C  ILD M G  W +WR  SG AFK ALRE V SV S+ Q EQ             + V  K  VL+ ALR++NI GSVR+D+  G  S ID +R++ P AS EYAAQM  R+L++E    GN SV++ Q   P+ADRV Y++ING G VTPVSDA T +EIIWLLP+ AA+EFR+QSA+TI RVLGGD+SLC EIEQRCARLQST+EGRAYQS MT + P+KK ++ +P  FEYAT+++K AY++ +        KK++V+  +++ E CK  L+SVGQF  R +IE+ADRI+D QRRA+R DN++ A AP+  D    ++ +A P+D++ID ETG+LI T K S SVRGPETSICVEA K+GI  GE+AGQVGKV KRL                 TTFRGKPF E  Y++  A L
Sbjct:    1 MNNNINNIVIDASSGDVAVKSMIKNIMPNLSESGILKTVHRVLGDCNGPKMSTRLMNGRLACAATLELCFEILDTMTGPPWRKWRSESGNAFKGALRERVESVRSASQTEQLXXXXXXXXX-XPQQVGIKTAVLQNALRSINIHGSVRIDDGLGKASIIDTVRLISPTASPEYAAQMFTRVLQKERGDCGNTSVRDEQTPTPIADRVDYIRINGRGKVTPVSDAKTIVEIIWLLPSGAAKEFRRQSAETICRVLGGDISLCGEIEQRCARLQSTEEGRAYQSFMTDQGPAKKQRAAMPARFEYATAEEKRAYISIEATTSKVLAKKALVLRYIDVFETCKEKLKSVGQFDERAQIEFADRIKDVQRRATRVDNMITA-APA-VDTSPVSVCVAMPVDDTIDTETGLLIETPKCSPSVRGPETSICVEAGKMGIGVGEKAGQVGKVVKRL-----------------TTFRGKPFSENTYYALFAVL 466          
BLAST of mRNA_Ecto-sp13_S_contig12219.1869.1 vs. uniprot
Match: A0A6H5JG13_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG13_9PHAE)

HSP 1 Score: 286 bits (732), Expect = 1.890e-87
Identity = 192/504 (38.10%), Postives = 280/504 (55.56%), Query Frame = 1
Query:   67 MDSIMIDATTGVVAVKTLVWHIQPQLHSSSVLKGVHRALEDA-GASMETSLMNGRYTKTATVDTCCTILDHMRGSFWNQWRQSSGLAFKRALREHVASVVSSGQVEQAHPPVQQAEEQYV---EGVETKAVVLRKALRAMNIQGSVRVDERSGMVSDIDVIRMLCPEASSEYAAQMLKRILEREDSAGGNHSVQNTQHSAPLADRVHYLKINGDGHVTPVSDAPTAIEIIWLLPARAAREFRKQSADTIARVLGGDVSLCAEIEQRCARLQSTDEGRAYQSVMTGE-----APSKKHKSLPEWFEYATSDQKSAYVAA-------KVKKSVVVTELEMHEVCKVGLESVGQFAGRDEIEYADRIRDTQRRASRADNLLGAPA------PSPEDAGDSAMLIATPIDNSIDPETGMLIATHKVSASVRGPETSICVEAAKLGISTGERAGQVGKVAKRLYGQKYGEEANRNIPTR-HTTFRGKPFVERAYFSRDADLIQEAIRIV 1509
            MD+I++DA  G V V +++   +P+LHS SVL  V  A+++  G  +   ++ GR T  A++DTC  ILD+M G  W  WR + G +FK +L +HVA+    G  +     V QA E      E  ETK   L+KA R +NI GSVR+DE SG  S +DVIR+L P  S + A +ML R+LE+++                + +     +++G    +P+    +       LP RAAR FR+QSA+ I RVLGGDVSLC EIEQRCARL ST EGR+ Q+ M+GE      P+K+ +  PE  E+AT +Q   Y+ A        +++++V +E+ +    K   E +     R +IE +DR+ D Q+R  R       P        S     ++A+++AT    ++DP  G    T   S  VRG E SI + A ++G+S G R G VGK  K LY ++YG+ A  NIP R +T ++G+PF E  YF+RD DL++ AIR+V
Sbjct:    1 MDNIVVDAA-GDVGVSSMIKAAKPELHSGSVLCSVRSAMKNFDGPGLTPKMVKGRTTTMASLDTCKYILDNMPGPRWVMWRSTQGNSFKESLTQHVAATHVQGVEDNVVEGVAQAAEAAEVEQEVAETKGSTLKKAFRTLNIDGSVRIDEASGKASVMDVIRLLSPGVSLDNARKMLSRLLEKDE----------------VTELEQRGQLSGPQTHSPIMCTTSRSTEKGGLP-RAARSFRRQSAEVITRVLGGDVSLCGEIEQRCARLGSTSEGRSNQAFMSGENGTEEQPAKRTRVGPEIMEFATEEQYEKYIKAGLQQEMVNIQQAIVKSEISLVMSLKEAFEKIQPLEPRQKIELSDRLSDVQKRYFRGGEESAMPVRDVRAITSSSTPAENAVVVAT----AVDPGHGT--PTPNCSRDVRGAEVSIAMIATEMGVSVGGRGGLVGKNIKALYAERYGQNAANNIPKRKNTVYQGRPFKENMYFTRDRDLVERAIRMV 480          
BLAST of mRNA_Ecto-sp13_S_contig12219.1869.1 vs. uniprot
Match: B5LWM4_9PHYC (Uncharacterized protein n=1 Tax=Feldmannia species virus TaxID=39420 RepID=B5LWM4_9PHYC)

HSP 1 Score: 278 bits (712), Expect = 8.260e-86
Identity = 169/360 (46.94%), Postives = 222/360 (61.67%), Query Frame = 1
Query:  487 SVRVDERSGMVSDIDVIRMLCPEASSEYAAQMLKRILEREDSAGGNHSVQNTQHSAP-LADRVHYLKINGDGHVTPVSDAPTAIEIIWLLPARAAREFRKQSADTIARVLGGDVSLCAEIEQRCARLQSTDEGRAYQSV------MTGEAPSK----KHKSLPEWFEYATSDQKSAYVAAKVKKSVVVTELEMHEVCKVGLESVGQFAGRDEIEYADRIRDTQRRASRADNLLGAPAPSPEDAGDSAMLIATPIDNSIDPETGMLIATHKVSASVRGPETSICVEAAKLGISTGERAGQVGKVAKRLYGQKYGEEANRNIPTRHTTFRGKPFVERAYFSRDADLIQEAIRIVCCPGQGST 1533
            ++RVD+ + + S ID IRM                +LE  DS+  N S+     S P L ++   LK+NG G  TPV+DA T IEI+WLLP R A  FR Q    I R+LGGD SL +EIE R A L  T+EGRA Q        +T + P +    +    P WF+ AT+++K A+ +  V K++V  E+EM++ CK  LESVGQF  RD IE+ DR+RD QRRA RA N++ +   +P D       +A P+D++ID  TG+ +AT + S SVRG ETSIC EAAKLGI  GE+ G++GK   R Y ++YG EA  NIP R TT+RGKPF E  Y+SRDADL+QEAIRIVC P + ST
Sbjct:   29 TIRVDKNTKLGSVIDTIRM----------------VLEC-DSSNANTSLGRLVLSHPGLGEKYTQLKVNGRGKPTPVADAKTLIEIVWLLPGRRAHAFRCQRVGKICRLLGGDTSLVSEIEARHATLTGTEEGRATQEFFLNDNHVTIDQPDQVKELRSGEEPSWFKNATAEEKRAFASTMVNKAIVSEEVEMYDFCKAKLESVGQFTTRDMIEFGDRVRDAQRRALRAGNMMTS---TPVDDTVVISAVARPVDDTIDSATGLPLATPECSESVRGVETSICNEAAKLGICVGEKGGEIGKELIRRYTKRYGVEAGLNIPKRPTTYRGKPFNENCYWSRDADLVQEAIRIVCSPEKKST 368          
BLAST of mRNA_Ecto-sp13_S_contig12219.1869.1 vs. uniprot
Match: B5LW93_9PHYC (Uncharacterized protein n=1 Tax=Feldmannia species virus TaxID=39420 RepID=B5LW93_9PHYC)

HSP 1 Score: 271 bits (693), Expect = 5.820e-82
Identity = 179/509 (35.17%), Postives = 268/509 (52.65%), Query Frame = 1
Query:   67 MDSIMIDATTGVVAVKTLVWHIQPQLHSSSVLKGVHRALEDAGASMETSLMNGRYTKTATVDTCCTILDHMRGSFWNQWRQSSGLAFKRALREHV----ASVVSSGQVEQAHPPVQQAEEQYVEGVETKAVVLRKALRAMNIQGSVRVDERSGMVSDIDVIRMLCPEASSEYAAQMLKRILEREDSAGGNHSVQNTQHSAPLADRVHYLKINGDGHVTPVSDAPTAIEIIWLLPARAAREFRKQSADTIARVLGGDVSLCAEIEQRCARLQSTDEGRAYQSVMTGEAPSKKHKSLPEWFEYATSDQKSAYVAAKVKKSVVV--------------------------TELEMHEVCKVGLESVGQFA-GRDEIEYADRIRDTQRRASRADNLLGAPAPSPEDAGDSAMLIATPIDNSIDPETGMLIATHKVSASVRGPETSICVEAAKLGISTGERAGQVGKVAKRLYGQKYGEEANRNIPTRHTTFRGKPFVERAYFSRDADLIQEAI 1500
            MDSI++D  +G++ V +++  I P +  S++ + V + L D+         + R ++  T+D    ++DH++    ++WR ++   FK  LR HV    A +V  G  E                VETKA VL+  LR++NI GS+RVDE +G+ S ID+++++CP+    YA   L R+LE              +    +AD V  LKING GHVTPV+DA T  EIIWLLP RAAREFR+QSA+ + RVLGGD +LC EIE+R   LQST EGRA+Q+   G    +K +   E  E+A+S+    +V  KV+  + V                          +EL +    K G ++V   +  R +IE +D + D QRRA R                      +  ++ ++DP  G+ + T    A++RG E SI + + ++G+  G RAG  GK  K LY  +YG +A  NIP R T F+G+P+ E  Y++RD DL+Q+AI
Sbjct:    1 MDSIIVDRASGLIGVSSIMKQIVPTVSDSTMWRMVEKTLRDSAVPKR----HLRKSRMLTLDEAFYLVDHVQFPLSSEWRAANADTFKENLRSHVQAKTAPLVGDGGGE---------------SVETKASVLQNCLRSVNIIGSIRVDEDTGLGSLIDIVKIVCPDMCKVYAKTTLARVLE--------------EWPHHVADCVKRLKINGRGHVTPVADAKTIAEIIWLLPGRAAREFRRQSAEIVMRVLGGDTTLCKEIEERSVGLQSTREGRAFQNFALGGESGEKKRLGGELMEHASSEDYERFVKMKVEHEMCVMEQXXXXXXXXXXXXXXXXQEEGKVDSELRIVASLKRGFDAVNSLSESRHKIELSDIVSDIQRRALRK---------------------SVSVETAVDP--GVSVPTPDCPANIRGEEVSIAMVSGEMGVHLGGRAGTAGKKLKVLYMARYGADAANNIPKRATIFQGRPYRENTYYARDKDLVQQAI 453          
BLAST of mRNA_Ecto-sp13_S_contig12219.1869.1 vs. uniprot
Match: Q6XM54_9PHYC (FirrV-1-A33 n=1 Tax=Feldmannia irregularis virus a TaxID=231992 RepID=Q6XM54_9PHYC)

HSP 1 Score: 228 bits (581), Expect = 1.920e-65
Identity = 171/496 (34.48%), Postives = 253/496 (51.01%), Query Frame = 1
Query:   67 MDSIMIDATTGVVAVKTLVWHIQPQLHSSSVLKGVHRALEDAGASMETSLMNGRYTKTATVDTCCTILDHMRGSFWNQWRQSSGLAFKRALREHVASVVSSGQVEQAHPPVQQAEEQYVEGVETKAVVLRKALRAMNIQGSVRVDERSGMVSDIDVIRMLCPEASSEYAAQMLKRILEREDSAGGNHSVQNTQHSAPL--ADRVHYLKINGDGHVTPVSDAPTAIEIIWLLPARAAREFRKQSADTIARVLGGDVSLCAEIEQRCARLQSTDEGRAYQSVMTGEAPSKKHKSLPEWFEYATSDQK----SAYVAAKVKKSVVVTELEMHEVCKVGLES---VGQFAGRDEIEYADR----IRDTQRRASRADNLLGAPAPSPEDAGDSAMLIATPIDNSIDPETGMLIATHKVSASVRGPETSICVEAAKLGISTGER-AGQVGKVAKRLYGQKYGEEANRN-IPTRHTTFRGKPFVERAYFSRDADLIQEAIRIV 1509
            M++I +D+ TG+V   ++V ++ P L +S V K    A + A  S       G +    +VD C  ++ +       QW       F+R L ++V    +                     VE+K   +++ALRA+NIQGS+RVDE S M S IDVI+++CPE S  +A + L  +++ +D   GN   ++   + PL  ++RV  ++ING G VTPV+DA T I IIWLLP RA   FR QSA+ IARVLGGD+ L  EI+Q+CA+LQ T EGRA+Q  M   AP  K + + + FE+    ++      + A K+K      + +  E+ K  +     V Q     ++E  DR    IRD     +R     G+ A  P       +L+        DP T     TH + A  RG ET+I V +AK+ +      +G+VGK+ ++ Y  KY    N N    R T   G+P +E  Y+ RDAD+I+EAIR V
Sbjct:    1 MENIFVDSATGLVGASSVVQYVLPGLSASFVRKVTKEAADKAQLSFSKIKHGGTFVNALSVDDCLEVMANSSQDGIKQWYARKAETFRRDLDDYVTRKTTQ--------------------VESKESCIQRALRALNIQGSIRVDEESRMGSVIDVIKLICPEKSEFHAYKTLSNLIDDDDKCIGN-KFKSDDSTIPLRLSERVKKIQINGRGRVTPVADAKTLIYIIWLLPGRAVAHFRAQSAEIIARVLGGDLRLAQEIQQQCAKLQETPEGRAFQDFM---APDAKKQKM-DMFEFLGPSKRVEIAEQFYAEKLKAIQQERQAKEQELKKKSITDIIDVYQSLKNIDVEIDDRTKVEIRDKVSILTRQMEGQGSHASPP-------LLLCE------DPST----PTHVLDAERRGQETNIVVVSAKMNVRVPPALSGKVGKLMRKKYINKYKLPTNWNDFIKRQTILHGRPCLENTYYERDADIIEEAIREV 454          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12219.1869.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Q8QN80_ESV1K4.290e-31186.52EsV-1-210 n=1 Tax=Ectocarpus siliculosus virus 1 (... [more]
D8LPL9_ECTSI5.340e-29883.98EsV-1-210 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
Q8QN79_ESV1K1.050e-18056.14EsV-1-211 n=2 Tax=root TaxID=1 RepID=Q8QN79_ESV1K[more]
A0A6H5JJP2_9PHAE3.610e-16052.46Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K200_9PHAE2.370e-15251.19Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L5N7_9PHAE1.210e-14451.85Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JG13_9PHAE1.890e-8738.10Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
B5LWM4_9PHYC8.260e-8646.94Uncharacterized protein n=1 Tax=Feldmannia species... [more]
B5LW93_9PHYC5.820e-8235.17Uncharacterized protein n=1 Tax=Feldmannia species... [more]
Q6XM54_9PHYC1.920e-6534.48FirrV-1-A33 n=1 Tax=Feldmannia irregularis virus a... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12219contigEcto-sp13_S_contig12219:3174..4712 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start0
Seed ortholog score831.6
Seed ortholog evalue1.9e-238
Seed eggNOG ortholog2880.D8LPL9
Model size1539
Hectar predicted targeting categoryother localisation
Exons1
EggNOG OGs2EUDG@1,2SWJG@2759
Cds size1539
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462649.7141337-CDS-Ecto-sp13_S_contig12219:3173..47121681462649.7141337-CDS-Ecto-sp13_S_contig12219:3173..4712Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12219 3174..4712 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12219.1869.1prot_Ecto-sp13_S_contig12219.1869.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig12219 3174..4712 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig12219.1869.1

>prot_Ecto-sp13_S_contig12219.1869.1 ID=prot_Ecto-sp13_S_contig12219.1869.1|Name=mRNA_Ecto-sp13_S_contig12219.1869.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=513bp
CLITSATAFKRSGKKSTLLSKTMDSIMIDATTGVVAVKTLVWHIQPQLHS
SSVLKGVHRALEDAGASMETSLMNGRYTKTATVDTCCTILDHMRGSFWNQ
WRQSSGLAFKRALREHVASVVSSGQVEQAHPPVQQAEEQYVEGVETKAVV
LRKALRAMNIQGSVRVDERSGMVSDIDVIRMLCPEASSEYAAQMLKRILE
REDSAGGNHSVQNTQHSAPLADRVHYLKINGDGHVTPVSDAPTAIEIIWL
LPARAAREFRKQSADTIARVLGGDVSLCAEIEQRCARLQSTDEGRAYQSV
MTGEAPSKKHKSLPEWFEYATSDQKSAYVAAKVKKSVVVTELEMHEVCKV
GLESVGQFAGRDEIEYADRIRDTQRRASRADNLLGAPAPSPEDAGDSAML
IATPIDNSIDPETGMLIATHKVSASVRGPETSICVEAAKLGISTGERAGQ
VGKVAKRLYGQKYGEEANRNIPTRHTTFRGKPFVERAYFSRDADLIQEAI
RIVCCPGQGSTP*
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mRNA from alignment at Ecto-sp13_S_contig12219:3174..4712-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig12219.1869.1 ID=mRNA_Ecto-sp13_S_contig12219.1869.1|Name=mRNA_Ecto-sp13_S_contig12219.1869.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1539bp|location=Sequence derived from alignment at Ecto-sp13_S_contig12219:3174..4712- (Ectocarpus species13 EcNAP12_S_4_19m)
TGTCTCATAACCAGCGCCACCGCGTTCAAACGCTCCGGAAAAAAATCTAC TCTCTTGAGTAAAACGATGGACAGCATCATGATCGACGCTACGACTGGTG TCGTTGCGGTCAAAACCCTCGTTTGGCACATCCAACCCCAGCTGCATAGC TCTTCGGTGCTGAAAGGCGTGCACCGCGCCTTGGAGGACGCCGGTGCCTC GATGGAAACGAGTTTAATGAATGGGCGTTACACCAAAACAGCCACGGTTG ACACGTGTTGCACTATACTAGACCACATGAGAGGTTCTTTTTGGAATCAG TGGCGGCAGTCGTCGGGGTTGGCGTTCAAGCGTGCTCTACGGGAGCACGT CGCAAGCGTTGTTTCCTCCGGTCAAGTCGAGCAAGCTCATCCCCCGGTGC AGCAGGCGGAGGAACAGTACGTGGAGGGAGTCGAGACGAAGGCAGTCGTG TTGCGCAAGGCGCTTCGGGCCATGAACATTCAGGGGTCGGTTCGGGTTGA TGAGCGATCGGGCATGGTTTCCGACATCGACGTCATTCGAATGCTGTGCC CAGAGGCTTCCTCCGAATACGCTGCCCAAATGTTAAAACGTATCCTTGAA CGGGAGGATTCTGCTGGCGGAAACCATTCCGTGCAAAATACACAGCACTC GGCGCCCCTGGCCGATCGCGTACACTACCTAAAAATCAACGGCGATGGGC ATGTTACCCCTGTAAGCGACGCCCCGACGGCCATCGAAATCATTTGGCTG CTCCCCGCGCGCGCCGCACGCGAGTTCCGCAAGCAATCCGCCGACACCAT CGCGCGCGTCCTCGGTGGCGATGTCTCGCTGTGCGCCGAGATCGAGCAGC GCTGTGCCCGCCTCCAGAGCACTGACGAGGGGAGGGCGTACCAGTCTGTC ATGACGGGCGAAGCGCCCTCCAAGAAGCACAAGTCATTGCCGGAATGGTT CGAGTACGCCACGAGCGACCAGAAGAGCGCTTATGTTGCGGCCAAAGTCA AGAAGAGCGTGGTCGTGACTGAACTTGAGATGCACGAGGTGTGTAAGGTT GGCTTGGAGTCGGTCGGTCAGTTCGCTGGGCGTGACGAAATCGAGTACGC CGATAGGATCCGAGACACGCAGAGGCGCGCGAGCAGGGCTGACAACCTCC TGGGCGCTCCGGCCCCATCCCCGGAGGATGCCGGTGATTCTGCCATGCTC ATCGCGACGCCGATTGATAACTCGATCGACCCGGAGACAGGCATGCTCAT TGCGACGCACAAGGTCAGCGCAAGCGTTCGAGGTCCGGAGACATCCATCT GCGTGGAGGCGGCAAAGCTCGGCATATCGACCGGAGAAAGGGCGGGACAG GTCGGCAAGGTGGCCAAGCGCCTGTATGGCCAAAAGTACGGCGAGGAAGC CAACCGCAACATTCCGACGAGGCACACTACCTTCAGGGGAAAGCCTTTCG TCGAAAGGGCCTACTTTTCACGCGACGCCGATCTGATTCAGGAAGCGATC CGCATCGTTTGCTGCCCCGGCCAAGGAAGCACGCCGTGA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig12219:3174..4712-

>mRNA_Ecto-sp13_S_contig12219.1869.1 ID=mRNA_Ecto-sp13_S_contig12219.1869.1|Name=mRNA_Ecto-sp13_S_contig12219.1869.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1539bp|location=Sequence derived from alignment at Ecto-sp13_S_contig12219:3174..4712- (Ectocarpus species13 EcNAP12_S_4_19m)
TGTCTCATAACCAGCGCCACCGCGTTCAAACGCTCCGGAAAAAAATCTAC
TCTCTTGAGTAAAACGATGGACAGCATCATGATCGACGCTACGACTGGTG
TCGTTGCGGTCAAAACCCTCGTTTGGCACATCCAACCCCAGCTGCATAGC
TCTTCGGTGCTGAAAGGCGTGCACCGCGCCTTGGAGGACGCCGGTGCCTC
GATGGAAACGAGTTTAATGAATGGGCGTTACACCAAAACAGCCACGGTTG
ACACGTGTTGCACTATACTAGACCACATGAGAGGTTCTTTTTGGAATCAG
TGGCGGCAGTCGTCGGGGTTGGCGTTCAAGCGTGCTCTACGGGAGCACGT
CGCAAGCGTTGTTTCCTCCGGTCAAGTCGAGCAAGCTCATCCCCCGGTGC
AGCAGGCGGAGGAACAGTACGTGGAGGGAGTCGAGACGAAGGCAGTCGTG
TTGCGCAAGGCGCTTCGGGCCATGAACATTCAGGGGTCGGTTCGGGTTGA
TGAGCGATCGGGCATGGTTTCCGACATCGACGTCATTCGAATGCTGTGCC
CAGAGGCTTCCTCCGAATACGCTGCCCAAATGTTAAAACGTATCCTTGAA
CGGGAGGATTCTGCTGGCGGAAACCATTCCGTGCAAAATACACAGCACTC
GGCGCCCCTGGCCGATCGCGTACACTACCTAAAAATCAACGGCGATGGGC
ATGTTACCCCTGTAAGCGACGCCCCGACGGCCATCGAAATCATTTGGCTG
CTCCCCGCGCGCGCCGCACGCGAGTTCCGCAAGCAATCCGCCGACACCAT
CGCGCGCGTCCTCGGTGGCGATGTCTCGCTGTGCGCCGAGATCGAGCAGC
GCTGTGCCCGCCTCCAGAGCACTGACGAGGGGAGGGCGTACCAGTCTGTC
ATGACGGGCGAAGCGCCCTCCAAGAAGCACAAGTCATTGCCGGAATGGTT
CGAGTACGCCACGAGCGACCAGAAGAGCGCTTATGTTGCGGCCAAAGTCA
AGAAGAGCGTGGTCGTGACTGAACTTGAGATGCACGAGGTGTGTAAGGTT
GGCTTGGAGTCGGTCGGTCAGTTCGCTGGGCGTGACGAAATCGAGTACGC
CGATAGGATCCGAGACACGCAGAGGCGCGCGAGCAGGGCTGACAACCTCC
TGGGCGCTCCGGCCCCATCCCCGGAGGATGCCGGTGATTCTGCCATGCTC
ATCGCGACGCCGATTGATAACTCGATCGACCCGGAGACAGGCATGCTCAT
TGCGACGCACAAGGTCAGCGCAAGCGTTCGAGGTCCGGAGACATCCATCT
GCGTGGAGGCGGCAAAGCTCGGCATATCGACCGGAGAAAGGGCGGGACAG
GTCGGCAAGGTGGCCAAGCGCCTGTATGGCCAAAAGTACGGCGAGGAAGC
CAACCGCAACATTCCGACGAGGCACACTACCTTCAGGGGAAAGCCTTTCG
TCGAAAGGGCCTACTTTTCACGCGACGCCGATCTGATTCAGGAAGCGATC
CGCATCGTTTGCTGCCCCGGCCAAGGAAGCACGCCGTGA
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