mRNA_Ecto-sp13_S_contig12212.1865.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
|
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig12212.1865.1 vs. uniprot
Match: D7G9G6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9G6_ECTSI) HSP 1 Score: 352 bits (903), Expect = 5.450e-112 Identity = 177/207 (85.51%), Postives = 185/207 (89.37%), Query Frame = 1
Query: 1 QGVSGQLFTIEPHGSVAMNADQWVPSPENGAEATEKETYRHSIPRTQGYPETSFINRLPIRSLGSCDELPLDRNRLDGAVYITGPIVCDEKRVIEIGQETVILTRSPDLYLMGVHFLVRKNAGLWISMGTMTVEALEASTAQ--GDSEEFFTVEPQGHLGLFANEASPVSEKGTPEGLFSRLVVKSGGVLVIEGQMSCATSIMTIIK 615
+GVSG LFTIEP GSV MNADQWVP PENG EA+EKE Y IPRT+ YP+ S+INRLPIRSLGSCDELPLDRNRLDGAVY+TGPIVCDEKRVIEI QETVI TRSPDLYLMGVHFLVR+NAGLWISMGTMTVEALEAST GDSEEFFTVEPQGHLGLFANE PVSEKGT E LFSRLVVKSGG LVIEG+MSCATSIMTIIK
Sbjct: 403 EGVSGPLFTIEPQGSVEMNADQWVPPPENGTEASEKEAYTPFIPRTKVYPDASYINRLPIRSLGSCDELPLDRNRLDGAVYVTGPIVCDEKRVIEISQETVIFTRSPDLYLMGVHFLVRENAGLWISMGTMTVEALEASTMDFDGDSEEFFTVEPQGHLGLFANEVGPVSEKGTSEDLFSRLVVKSGGALVIEGRMSCATSIMTIIK 609
BLAST of mRNA_Ecto-sp13_S_contig12212.1865.1 vs. uniprot
Match: D8LLQ3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLQ3_ECTSI) HSP 1 Score: 174 bits (440), Expect = 1.510e-46 Identity = 89/170 (52.35%), Postives = 119/170 (70.00%), Query Frame = 1
Query: 106 KETYRHSIPRTQGYPETSFINRLPIRSLGSCDELPLDRNRLDGAVYITGPIVCDEKRVIEIGQETVILTRSP-DLYLMGVHFLVRKNAGLWISMGTMTVEALEASTAQGDSEEFFTVEPQGHLGLFANEASPVSEKGTPEGLFSRLVVKSGGVLVIEGQMSCATSIMTII 612
++TY I RT G+P +++LP+R LGSCDELPLDR LDG V+ITG IVCD KRVIE+ ETVI++ P DL+L GV F VR+ AGLW+ + T T+EALE GD+ EFF+VEPQGHLGL+A+ P+ + G E SR++VK+GG L ++G++S S M +
Sbjct: 456 RQTYTDVISRTPGFPGEDELDKLPMRGLGSCDELPLDRTPLDGRVFITGDIVCDVKRVIEVRTETVIISDLPGDLHLKGVTFDVRQGAGLWVIVATTTIEALE-----GDTAEFFSVEPQGHLGLYADRVGPLPDDGMAEDKHSRVLVKAGGALDVDGEISFTASGMRFV 620
BLAST of mRNA_Ecto-sp13_S_contig12212.1865.1 vs. uniprot
Match: A0A6H5L8D9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8D9_9PHAE) HSP 1 Score: 152 bits (384), Expect = 4.950e-39 Identity = 102/287 (35.54%), Postives = 133/287 (46.34%), Query Frame = 1
Query: 1 QGVSGQLFTIEPHGSVAMNADQWVPSPENGAE-------------------------------------------------------------ATEKE----------------------TYRHSIPRTQGYPETSFINRLPIRSLGSCDELPLDRNRLDGAVYITGPIVCDEKRVIEIGQETVILTRSPDLYLMGVHFLVRKNAGLWISMGTMTVEALEASTAQGDSEEFFTVEPQGHLGLFANEASPVSEKGTPEGLFSRLVVKSGGVLVIEGQMSCATSIMTII 612
+G SG+LFT+EP G +AM+AD+W PSPE G E AT+ Y +SI T + + + ++LP R+LGSCDEL LDRN G V+ITG IVCD KRVIEI E +I DLY+ GV F V + GL I +G MT+EALE GDS EF TVEPQGHLG+FA+ + + E SR++VK+GG L ++GQ+ S M +
Sbjct: 668 EGESGELFTVEPQGVLAMSADKWSPSPEIGTEEDVHSLVALKGGTFELDGKASFTASTMTISMRNKNEEKKLKNNDNEDNRGTCQSTVEHPSTATDDNHNAAAPGNADAGVIDVTSGGGHAYSNSISTTPRFHDDAEWDKLPRRNLGSCDELALDRNPPHGRVFITGDIVCDVKRVIEIRTEAMIYAAVDDLYVRGVQFHVEQTGGLGIMVGAMTMEALE-----GDSAEFITVEPQGHLGMFADSVGRLPDDSMAEDKHSRVLVKAGGALDVDGQVRYTASGMRFV 949
BLAST of mRNA_Ecto-sp13_S_contig12212.1865.1 vs. uniprot
Match: D8LLQ5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLQ5_ECTSI) HSP 1 Score: 152 bits (383), Expect = 6.760e-39 Identity = 103/290 (35.52%), Postives = 132/290 (45.52%), Query Frame = 1
Query: 1 QGVSGQLFTIEPHGSVAMNADQWVPSPENGAE----------------------------------------------------ATEKETYRH----------------------------------SIPRTQGYPETSFINRLPIRSLGSCDELPLDRNRLDGAVYITGPIVCDEKRVIEIGQETVILTRSPDLYLMGVHFLVRKNAGLWISMGTMTVEALEASTAQGDSEEFFTVEPQGHLGLFANEASPVSEKGTPEGLFSRLVVKSGGVLVIEGQMSCATSIMTII 612
+G SG+LFT+EP G +AM+AD PSP+NG E T + T H +I T G+ + + ++ P R LGSCDEL LDRN L G V+ITG IVCD KRVIEI E +I DLY+ GV F V++ GL I +GTMT+EALE DS EFFTVEPQGHLGLFA+ + E SR++VK+GG L ++GQ+ S M +
Sbjct: 715 EGESGELFTVEPQGVLAMSADMGSPSPDNGTEEDVHSLVALKKGGRFELDGRASFTASTMTISMRNKSEERKKNKDKNLNESNGGTCESTVEHPPTATVDDHYAAAPGSADAGVIDVTSDGGHVHTNAISTTPGFHDDAEWDKKPRRDLGSCDELDLDRNPLHGRVFITGDIVCDVKRVIEISSEAMIYAAVDDLYMRGVQFHVQQTGGLGIMVGTMTMEALER-----DSAEFFTVEPQGHLGLFADSVGQLPNDSIAEDKNSRVLVKAGGALDVDGQIRYTASGMRFV 999
BLAST of mRNA_Ecto-sp13_S_contig12212.1865.1 vs. uniprot
Match: A0A6H5JIS5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIS5_9PHAE) HSP 1 Score: 129 bits (323), Expect = 1.270e-31 Identity = 73/160 (45.62%), Postives = 97/160 (60.62%), Query Frame = 1
Query: 106 KETYRHSIPRTQGYPETSFINRLPIRSLGSCDELPLDRNRLDGAVYITGPIVCDEK-----------------------RVIEIGQETVILTRSP-DLYLMGVHFLVRKNAGLWISMGTMTVEALEASTAQGDSEEFFTVEPQGHLGLFANEASPVSEKG 513
++TY + I RT G+P+ +++LP+R LG ELPLDR+ L G V+I G IVC +K +VIE+ ETVI++ P DL+L GV F VR+ AGLWI + T T+EALE GDS EFFTVEPQGHLGL+A+ P+ + G
Sbjct: 148 RQTYTNVISRTTGFPDDDELDKLPMRDLGPRGELPLDRSPLHGRVFIIGDIVCHKKQPLPSPPVDSTSHTQRSTSRPNPKVIEVRTETVIISDLPGDLHLKGVTFDVRQGAGLWIIVATTTIEALE-----GDSAEFFTVEPQGHLGLYADRVGPLPDDG 302
BLAST of mRNA_Ecto-sp13_S_contig12212.1865.1 vs. uniprot
Match: D8LN98_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN98_ECTSI) HSP 1 Score: 103 bits (258), Expect = 3.260e-22 Identity = 56/126 (44.44%), Postives = 76/126 (60.32%), Query Frame = 1
Query: 148 PETSFINRLPIRSLGSCDELPLDRNRLDGAVYITGPIVCDEKRVIEIGQETVILTRSPDLYLMGVHFLVRKNAGLWISMGTMTVEALEASTAQGDSEEFFTVEPQGHLGLFANEASPVSEKGTPEG 525
P + I + P + + SCDEL + RL+G + ITG +VC E+R++EI E +IL+ P LYL GV F V++NA L + M VE LE G S FTVEPQG++GL AN PV + G+ G
Sbjct: 237 PTRTEIEKSPSQKIHSCDELRSNGTRLEGVLLITGDVVCQEERLLEITDELIILSEKPVLYLEGVRFHVKQNATLRFGVSAMHVEQLE-----GGSGAIFTVEPQGYVGLHANGQGPVPQDGSEVG 357
BLAST of mRNA_Ecto-sp13_S_contig12212.1865.1 vs. uniprot
Match: D7G0Y7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0Y7_ECTSI) HSP 1 Score: 100 bits (248), Expect = 6.920e-21 Identity = 62/201 (30.85%), Postives = 104/201 (51.74%), Query Frame = 1
Query: 34 PHGSVAMNADQWVPSPENGAEATEKETYRHSIPRTQGYPET-------SFINRLPIRSLGSCDELPLDRNRLDGAVYITGPIVCDEKRVIEIGQETVILTRSPDLYLMGVHFLVRKNAGLWISMGTMTVEALEASTAQGDSEEFFTVEPQGHLGLFANEASPVSEKGTPEGLFSRLVVKSGGVLVIEGQMSCATSIMTIIK 615
P S D+ + +P N + + + R +IP T T + +++LP + SCD+L G V +TG I+C+EKRVI++ +E +++T P+L GVHF VRK+A L IS+ M++E ++ GD+ V+P G L L ++ E GT SR+ ++ GG + + G+ S +T++K
Sbjct: 38 PRASTNKAIDEDIKTPRNPSPSRDTHPDREAIPETNPSTTTKRRLSTDAELHKLPEAVVSSCDQLHSPLMAAYGVVRVTGDIICEEKRVIQVKEEAILITEKPNLVTKGVHFRVRKDAALRISVRQMSIENIK-----GDTSPLLRVDPGGLLRLEIHDFGTPPEGGTMTDTNSRVRIEEGGEVQVWGEPWFTKSAITLMK 233
BLAST of mRNA_Ecto-sp13_S_contig12212.1865.1 vs. uniprot
Match: A0A6H5L4D7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4D7_9PHAE) HSP 1 Score: 86.7 bits (213), Expect = 5.170e-18 Identity = 47/83 (56.63%), Postives = 58/83 (69.88%), Query Frame = 1
Query: 268 EKRVIEIGQETVILTRSP-DLYLMGVHFLVRKNAGLWISMGTMTVEALEASTAQGDSEEFFTVEPQGHLGLFANEASPVSEKG 513
E VIE+ ETVI++ P DL+L GV F VR+ AGLWI + T T+EALE GDS EFFTVEPQGHLGL+A+ P+ + G
Sbjct: 71 ETSVIEVRTETVIISDLPGDLHLKGVTFDVRQGAGLWIIVATTTIEALE-----GDSAEFFTVEPQGHLGLYADRVGPLPDDG 148
BLAST of mRNA_Ecto-sp13_S_contig12212.1865.1 vs. uniprot
Match: D8LLQ0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLQ0_ECTSI) HSP 1 Score: 90.9 bits (224), Expect = 1.280e-17 Identity = 52/159 (32.70%), Postives = 77/159 (48.43%), Query Frame = 1
Query: 139 QGYPETSFINRLPIRSLGSCDELPLDRNRLDGAVYITGPIVCDEKRVIEIGQETVILTRSPDLYLMGVHFLVRKNAGLWISMGTMTVEALEASTAQGDSEEFFTVEPQGHLGLFANEASPVSEKGTPEGLFSRLVVKSGGVLVIEGQMSCATSIMTIIK 615
QG P I+ + +L SCD+L + G V +T ++C E R IE+ ++ +++ P L+ GV F VR+ L + TM +E LE G S F VEPQG LGL+A+E P E T S + K G L E + +T++
Sbjct: 770 QGLPRIDDIDNIVASTLNSCDDLTAGWTPVYGIVVVTDHVICQEARTIEVSKKAYFISKIPTLWFKGVTFYVRETGSLTFGIPTMHLETLE-----GQSGGIFAVEPQGALGLYADECIPFPEDSTDVDTHSLVRAKEGAKLNFEAAVRYTAVSITVVS 923
BLAST of mRNA_Ecto-sp13_S_contig12212.1865.1 vs. uniprot
Match: D8LLS3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLS3_ECTSI) HSP 1 Score: 65.1 bits (157), Expect = 9.540e-9 Identity = 30/53 (56.60%), Postives = 39/53 (73.58%), Query Frame = 1
Query: 424 QGDSEEFFTVEPQGHLGLFANEASPVSEKGTPEGLFSRLVVKSGGVLVIEGQM 582
QGDS EFFTVEPQGHLGL+A+ + P+ + G E SR +VK GG L ++GQ+
Sbjct: 418 QGDSAEFFTVEPQGHLGLYADRSGPLLDDGMAEDKHSRELVKEGGALDVDGQI 470 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12212.1865.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig12212.1865.1 >prot_Ecto-sp13_S_contig12212.1865.1 ID=prot_Ecto-sp13_S_contig12212.1865.1|Name=mRNA_Ecto-sp13_S_contig12212.1865.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=205bp QGVSGQLFTIEPHGSVAMNADQWVPSPENGAEATEKETYRHSIPRTQGYPback to top mRNA from alignment at Ecto-sp13_S_contig12212:166..3486+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig12212.1865.1 ID=mRNA_Ecto-sp13_S_contig12212.1865.1|Name=mRNA_Ecto-sp13_S_contig12212.1865.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3321bp|location=Sequence derived from alignment at Ecto-sp13_S_contig12212:166..3486+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig12212:166..3486+ >mRNA_Ecto-sp13_S_contig12212.1865.1 ID=mRNA_Ecto-sp13_S_contig12212.1865.1|Name=mRNA_Ecto-sp13_S_contig12212.1865.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=615bp|location=Sequence derived from alignment at Ecto-sp13_S_contig12212:166..3486+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |