mRNA_Ecto-sp13_S_contig1221.1861.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig1221.1861.1
Unique NamemRNA_Ecto-sp13_S_contig1221.1861.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig1221.1861.1 vs. uniprot
Match: D7G1G1_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1G1_ECTSI)

HSP 1 Score: 418 bits (1074), Expect = 2.410e-142
Identity = 195/248 (78.63%), Postives = 215/248 (86.69%), Query Frame = 2
Query:   68 GFGCGGVLLCFVMVKMMVGTASAGSIRMTECPPDAPEATFRWVNEGEYLYVEGAGSCVTLPDIYNAVENPPLTYHTVDGDESDTETGIWLMTKNIFMESGTTLLLHDDLGCDELRIISSSTNARHLRAFGAYISLLRTKLTSWSVGNRAPDNGAYDGLNARSFISAVSEMTHPSDTCDGAADDDAGEARMDIINSEVAYLGYQAAESYGISYKVRGYCVDESNPEVFDRVNVRGDIRFSDIHHNWFGQ 811
            G    G+LL  ++    V T SAGSIR+TECP DAPEATF W N+G+YLYVEG GSCVTLPDIYN V+NPPLTYHTVDGDESDTETGIWL+TK+++M  GTTLLLHDDLGC ELRI SSSTNA HL  FG YIS+L TK+TSWSV N+ PD GAYDG N RS++SAVSEMTHPSDTCDGAADDDAGEAR+DIINS+V YLGYQAAESYG++YKVRGYC DESNPEVFDRVNVRGDIRFSDIHHNWFGQ
Sbjct:    9 GSAAAGLLLFLLLAGTRVQTGSAGSIRLTECPADAPEATFSWTNDGDYLYVEGDGSCVTLPDIYNGVDNPPLTYHTVDGDESDTETGIWLLTKHLYMRPGTTLLLHDDLGCTELRIASSSTNALHLNTFGGYISILNTKVTSWSVSNKEPDAGAYDGSNPRSYMSAVSEMTHPSDTCDGAADDDAGEARLDIINSDVGYLGYQAAESYGLTYKVRGYCTDESNPEVFDRVNVRGDIRFSDIHHNWFGQ 256          
BLAST of mRNA_Ecto-sp13_S_contig1221.1861.1 vs. uniprot
Match: D7G1G2_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1G2_ECTSI)

HSP 1 Score: 266 bits (681), Expect = 8.700e-85
Identity = 132/161 (81.99%), Postives = 133/161 (82.61%), Query Frame = 2
Query:  329 IWLMTKNIFMESGTTLLLHDDLGCDELRIISSSTNARHLRAFGAYISLLRTKLTSWSVGNRAPDNGAYDGLNARSFISAVSEMTHPSDTCDGAADDDAGEARMDIINSEVAYLGYQAAESYGISYKVRGYCVDESNPEVFDRVNVRGDIRFSDIHHNWFGQ 811
            IWLMTKNIFMESGTTLLLHDDLGCD                           LTSWSVGNRAPDNGAYDGLNARSFISAVSEMTHPSDTCDGAADDDAGEARMDIINSEVAYLGYQA+ESYGISYKVRGYC DESNPEVFDRVNVRGDIRFSDIHHNWFGQ
Sbjct:    3 IWLMTKNIFMESGTTLLLHDDLGCD---------------------------LTSWSVGNRAPDNGAYDGLNARSFISAVSEMTHPSDTCDGAADDDAGEARMDIINSEVAYLGYQASESYGISYKVRGYCTDESNPEVFDRVNVRGDIRFSDIHHNWFGQ 136          
BLAST of mRNA_Ecto-sp13_S_contig1221.1861.1 vs. uniprot
Match: A0A6H5L834_9PHAE (MEP8 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L834_9PHAE)

HSP 1 Score: 207 bits (527), Expect = 6.680e-65
Identity = 94/110 (85.45%), Postives = 103/110 (93.64%), Query Frame = 2
Query:  482 KLTSWSVGNRAPDNGAYDGLNARSFISAVSEMTHPSDTCDGAADDDAGEARMDIINSEVAYLGYQAAESYGISYKVRGYCVDESNPEVFDRVNVRGDIRFSDIHHNWFGQ 811
            ++TSWSV ++ PD GAYDG N RS+ISAVSEMTHPSDTCDGAADDDAGEAR+DIINS+V YLGYQAAESYG++YKVRGYC DESNPEVFDRVNVRGDIRFSDIHHNWFGQ
Sbjct:    8 QVTSWSVSDKEPDAGAYDGSNPRSYISAVSEMTHPSDTCDGAADDDAGEARLDIINSDVGYLGYQAAESYGLTYKVRGYCADESNPEVFDRVNVRGDIRFSDIHHNWFGQ 117          
BLAST of mRNA_Ecto-sp13_S_contig1221.1861.1 vs. uniprot
Match: A0A6H5KKL2_9PHAE (MEP23 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKL2_9PHAE)

HSP 1 Score: 204 bits (520), Expect = 5.940e-64
Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 2
Query:  338 MTKNIFMESGTTLLLHDDLGCDELRIISSSTNARHLRAFGAYISLLRTKLTSWSVGNRAPDNGAYDGLNARSFISAVSEMTHPSDTCDGAADDDAGEARMD 640
            MTKNIFMESGTTLLLHDDLGCDELRIISSSTNARHLRAFGAYISLLRTKLTSWSVGNRAPDNGAYDGLNARSFISAVSEMTHPSDTCDGAADDDAGEARMD
Sbjct:    1 MTKNIFMESGTTLLLHDDLGCDELRIISSSTNARHLRAFGAYISLLRTKLTSWSVGNRAPDNGAYDGLNARSFISAVSEMTHPSDTCDGAADDDAGEARMD 101          
BLAST of mRNA_Ecto-sp13_S_contig1221.1861.1 vs. uniprot
Match: D8LHA2_ECTSI (Mannuronan C-5-epimerase N-terminal n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHA2_ECTSI)

HSP 1 Score: 181 bits (459), Expect = 2.250e-52
Identity = 113/270 (41.85%), Postives = 160/270 (59.26%), Query Frame = 2
Query:   38 MDRRRRAAAGGFGCGGV-LLCFVMVKMMVGTASAGS-IRMTECPPDAPEATFRWVNEGEYLYVEGA-----GSCVTLPDIYN--AVENPPLTYHTVDGDESDTETGIWLMTKNIFMESGTTLLLH--DDLG-CDELRIISSSTNARHLRAFGAYISLLRTKLTSWSVGNRAPDNGAYDGLNARSFISAVSEM-THPSDTCDGAADDDAGEARMDIINSEVAYLGYQAAESYGISYKVRGYCVDESNPEVFDRVNVRGDIRFSDIHHNWFG 808
            M+ RRR+A   FG   + LL          TAS    I   +C  D  E + R+    + LY+E A     G C TL  ++   A + P        GD S+T+TG WL+T+ +++E G TL ++  D+ G  DELR++S+S    +LRA+G  +  + TK+ SW     +PD    DG   RS+ISAVSE+ T   ++C+G A +  GEARMDI NSE+ YLG+Q +ESYG+++KVRG+C D+SNPE+FD VNV G++  SDIHH  FG
Sbjct:    1 MEFRRRSATSSFGLALLGLLASTTPAAAADTASPNDPISKPDCDSDI-EVSIRYAGNTKRLYLESADGETRGGCATLGQVWESRAGKGPLYAVDPDSGDVSETQTGTWLLTEELYVEDGITLKVYGTDEGGDADELRLLSTSDTYINLRAYGGSLDFVGTKVFSWDTSTNSPDVVETDG---RSYISAVSEIVTDEDESCEGHAKNTMGEARMDIENSEIGYLGFQDSESYGLTWKVRGFCKDKSNPEIFDDVNVYGNMYDSDIHHLRFG 266          
BLAST of mRNA_Ecto-sp13_S_contig1221.1861.1 vs. uniprot
Match: A0A6H5K9I9_9PHAE (MEP6 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9I9_9PHAE)

HSP 1 Score: 186 bits (473), Expect = 3.310e-52
Identity = 114/254 (44.88%), Postives = 153/254 (60.24%), Query Frame = 2
Query:  107 VKMMVGTASAGSIRMTECPPDAPEA--TFRWVNEGEYLYVEGAGSCVTLPDIY-----NAVENP------------PLTYHTVDGDESDTETGIWLMTKNIFMESGTTLLLHDDLGCDELRIISSSTNARHLRAFGAYISLLRTKLTSWSVGNRAPDNGAYDGLNARSFISAVSE-MTHPSDTCDGAADDDAGEARMDIINSEVAYLGYQAAESYGISYKVRGYCVDESNPEVFDRVNVRGDIRFSDIHHNWFG 808
            V ++   A+AG   + E      EA  + R+  E + LY+EG G C+T  DIY     N  E+             P+T  T DG+ SD ETG WL T ++++  G  L LH + G   +R+ S S     LRA G ++SLL T+L+SW V + A     Y     RS+++A+SE +  P  TC G A +DAGEAR DIINSEV +LG+   E+YGI++KVRG+CVD SN ++FDRVNVRGDIRFSDIHHN+FG
Sbjct:   11 VGLVAAAAAAGLATLGEACDYTLEAKASLRFNIETDRLYLEGGG-CITPSDIYLAKLTNVTEDDGNTLTAEEAAAIPITPITKDGEFSDAETGYWLFTSDVYIYDGVKLELHAESGTTGMRLKSDS-KVIELRAHGGWLSLLNTELSSWDV-DEADYASNYSA--PRSYVTAISEVLDSPPQTCVGHAKNDAGEARFDIINSEVHHLGHYGTEAYGITWKVRGFCVDLSNEDLFDRVNVRGDIRFSDIHHNYFG 259          
BLAST of mRNA_Ecto-sp13_S_contig1221.1861.1 vs. uniprot
Match: Q7XAJ8_9PHAE (Mannuronan C-5-epimerase (Fragment) n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAJ8_9PHAE)

HSP 1 Score: 185 bits (469), Expect = 7.580e-52
Identity = 106/220 (48.18%), Postives = 139/220 (63.18%), Query Frame = 2
Query:  188 RWVNEGEYLYVEGA-----GSCVTLPDIYNA-VENPPLTYHTVD---GDESDTETGIWLMTKNIFMESGTTLLLHDDLG---CDELRIISSSTNARHLRAFGAYISLLRTKLTSWSVGNRAPDNGAYDGLNARSFISAVSEM-THPSDTCDGAADDDAGEARMDIINSEVAYLGYQAAESYGISYKVRGYCVDESNPEVFDRVNVRGDIRFSDIHHNWFG 808
            R+  E   LY+E A     G CVTL  I+   V+  PL  + VD   GD S + TG WL+T+ +++E G TL +H        DELR++S+S    HLRA+G  +  L TK+ +W     APD    DG   RS+ISAVSE+ T    TC+G A ++ GEARMDI NSE+AYLGY   E+YG+++KVRG+CVD+ NPE+FD VNV G+I  SDIHHN FG
Sbjct:   19 RYNAESARLYIESANGRTRGGCVTLEQIWEQQVDGSPL--YAVDPKSGDVSRSATGTWLLTEEMYVEDGITLQVHGISAGGDADELRLLSTSDTFIHLRAYGGSLDFLSTKVFAWDTSKNAPDQDESDG---RSYISAVSEVITDDRQTCNGRAKNNMGEARMDIENSEMAYLGYHGTETYGLTWKVRGFCVDKGNPELFDDVNVYGNIYDSDIHHNNFG 233          
BLAST of mRNA_Ecto-sp13_S_contig1221.1861.1 vs. uniprot
Match: D7FXE4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE4_ECTSI)

HSP 1 Score: 182 bits (462), Expect = 1.730e-50
Identity = 115/270 (42.59%), Postives = 159/270 (58.89%), Query Frame = 2
Query:   38 MDRRRRAAAGGFGCGGV-LLCFVMVKMMVGTASAGS-IRMTECPPDAPEATFRWVNEGEYLYVEGA-----GSCVTLPDIYN--AVENPPLTYHTVDGDESDTETGIWLMTKNIFMESGTTLLLH--DDLG-CDELRIISSSTNARHLRAFGAYISLLRTKLTSWSVGNRAPDNGAYDGLNARSFISAVSEM-THPSDTCDGAADDDAGEARMDIINSEVAYLGYQAAESYGISYKVRGYCVDESNPEVFDRVNVRGDIRFSDIHHNWFG 808
            M+ RR++A   FG   + LL          TAS    I   +C  D  E + R+    + LY+E A     G C TL  I+   A + P        GD S+TETG WL+T+ +++E G TL ++  D+ G  DELR++S+S    +LRA G  +  + TK+ SW     +PD    DG   RS+ISAVSE+ T   +TC+G A +  GEARMDI NSE+ YLG+Q +ESYG+++KVRG+C D+SNPE+FD VNV G++  SDIHH  FG
Sbjct:    1 MEFRRKSATSSFGLALLGLLASTTPAAAADTASPNDPISKPDCDSDI-EVSIRYAGTTKRLYLESADGETRGGCATLGQIWESRAGKAPLYAVDPDSGDVSETETGTWLLTEELYVEDGITLKVYGTDEGGDADELRLLSTSETYINLRAHGGSLDFVGTKVFSWDTSTNSPDEDETDG---RSYISAVSEIVTDEDETCEGNAKNTMGEARMDIENSEIGYLGFQDSESYGLTWKVRGFCKDKSNPEIFDDVNVYGNMYDSDIHHLRFG 266          
BLAST of mRNA_Ecto-sp13_S_contig1221.1861.1 vs. uniprot
Match: A0A6H5JU98_9PHAE (MEP5a protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU98_9PHAE)

HSP 1 Score: 176 bits (447), Expect = 6.660e-50
Identity = 107/254 (42.13%), Postives = 151/254 (59.45%), Query Frame = 2
Query:   89 LLCFVMVKMMVGTASAGS-IRMTECPPDAPEATFRWVNEGEYLYVEGA-----GSCVTLPDIY-NAVENPPLTYHTVD---GDESDTETGIWLMTKNIFMESGTTLLLH---DDLGCDELRIISSSTNARHLRAFGAYISLLRTKLTSWSVGNRAPDNGAYDGLNARSFISAVSEM-THPSDTCDGAADDDAGEARMDIINSEVAYLGYQAAESYGISYKVRGYCVDESNPEVFDRVNVRGDIRFSDIHHNWFG 808
            LL   M      TAS    I   +C  D    + R+ +  + LY+E A     G CVTL  I+ N     PL  + VD   G+ES+ ETG WL+T+ +++E G TL ++   +    DELR++S++    +LRA G  +  + TK+ SW     +PD    DG   RS+ISA+SE+ T   +TC+G A +  GEARMDI NSE+ YLG+Q +ESYG+++KVRG+C D+SNP +FD VNV G++  SDIHH  FG
Sbjct:   18 LLAATMRAAAADTASPNDPISKPDCDSDIA-VSIRYASSTKRLYLESADGETRGGCVTLGQIWENRAGKAPL--YAVDPESGNESENETGTWLLTEELYVEDGITLKVYGTGEGGDADELRLLSTTDTYINLRAHGGSLDFVGTKVFSWDTSTNSPDEDETDG---RSYISAISEIITDEDETCEGNAKNTMGEARMDIENSEIGYLGFQDSESYGLTWKVRGFCKDKSNPGIFDEVNVYGNMYDSDIHHMRFG 265          
BLAST of mRNA_Ecto-sp13_S_contig1221.1861.1 vs. uniprot
Match: Q7XAJ7_9PHAE (Mannuronan C-5-epimerase n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAJ7_9PHAE)

HSP 1 Score: 177 bits (448), Expect = 1.500e-48
Identity = 100/220 (45.45%), Postives = 137/220 (62.27%), Query Frame = 2
Query:  182 TFRWVNEGEYLYVEGA-----GSCVTLPDIYNAV--ENPPLTYHTVDGDESDTETGIWLMTKNIFMESGTTLLLHDDLG---CDELRIISSSTNARHLRAFGAYISLLRTKLTSWSVGNRAPDNGAYDGLNARSFISAVSEM-THPSDTCDGAADDDAGEARMDIINSEVAYLGYQAAESYGISYKVRGYCVDESNPEVFDRVNVRGDIRFSDIHHNWFG 808
            + R+ +  E LY+E A     G CVTL  I+     E P     +  GD SD+ TG WL+T+ +F+E G TL +H        DELR++S+S    +LRA G  +  L TK+ +W      PD    DG   RS++SAVSE+ T  S TC+G A ++ GEARMDI +SE+ YLGY  +ESYG+++KVRG+CVD+SN ++F+ VNV G+I  SDIHHN FG
Sbjct:   43 SIRYSSVYERLYLESADSKTRGGCVTLEQIWEHQRGEAPLYAVDSKSGDISDSATGTWLLTEELFVEDGITLKVHGTSAGGDADELRLLSTSDTFINLRAHGGSLDFLSTKVFAWDTSINGPDRDEEDG---RSYVSAVSEVITDDSQTCNGRAKNNMGEARMDIEDSEMGYLGYHGSESYGLTWKVRGFCVDKSNHDLFEDVNVYGNIYDSDIHHNNFG 259          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1221.1861.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G1G1_ECTSI2.410e-14278.63Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
D7G1G2_ECTSI8.700e-8581.99Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
A0A6H5L834_9PHAE6.680e-6585.45MEP8 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
A0A6H5KKL2_9PHAE5.940e-64100.00MEP23 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 ... [more]
D8LHA2_ECTSI2.250e-5241.85Mannuronan C-5-epimerase N-terminal n=1 Tax=Ectoca... [more]
A0A6H5K9I9_9PHAE3.310e-5244.88MEP6 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
Q7XAJ8_9PHAE7.580e-5248.18Mannuronan C-5-epimerase (Fragment) n=1 Tax=Lamina... [more]
D7FXE4_ECTSI1.730e-5042.59Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
A0A6H5JU98_9PHAE6.660e-5042.13MEP5a protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 ... [more]
Q7XAJ7_9PHAE1.500e-4845.45Mannuronan C-5-epimerase n=1 Tax=Laminaria digitat... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1221contigEcto-sp13_S_contig1221:892..5341 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score146.7
Seed ortholog evalue1.5e-32
Seed eggNOG ortholog2880.D8LC73
Model size814
KEGG koko:K11244
KEGG Pathwayko04011,ko04139,map04011,map04139
Hectar predicted targeting categorysignal peptide
Exons6
EggNOG free text desc.protein xylosyltransferase activity
EggNOG OGsKOG4157@1,KOG4157@2759
Cds size792
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1221.1861.1prot_Ecto-sp13_S_contig1221.1861.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig1221 892..5319 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462649.1352777-CDS-Ecto-sp13_S_contig1221:891..9991681462649.1352777-CDS-Ecto-sp13_S_contig1221:891..999Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1221 892..999 -
1681462649.1482494-CDS-Ecto-sp13_S_contig1221:1350..14151681462649.1482494-CDS-Ecto-sp13_S_contig1221:1350..1415Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1221 1351..1415 -
1681462649.1611845-CDS-Ecto-sp13_S_contig1221:2000..21571681462649.1611845-CDS-Ecto-sp13_S_contig1221:2000..2157Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1221 2001..2157 -
1681462649.1780355-CDS-Ecto-sp13_S_contig1221:2808..28891681462649.1780355-CDS-Ecto-sp13_S_contig1221:2808..2889Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1221 2809..2889 -
1681462649.1879756-CDS-Ecto-sp13_S_contig1221:3473..35491681462649.1879756-CDS-Ecto-sp13_S_contig1221:3473..3549Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1221 3474..3549 -
1681462649.195995-CDS-Ecto-sp13_S_contig1221:5014..53191681462649.195995-CDS-Ecto-sp13_S_contig1221:5014..5319Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1221 5015..5319 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462649.2041183-UTR-Ecto-sp13_S_contig1221:5319..53411681462649.2041183-UTR-Ecto-sp13_S_contig1221:5319..5341Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig1221 5320..5341 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig1221.1861.1

>prot_Ecto-sp13_S_contig1221.1861.1 ID=prot_Ecto-sp13_S_contig1221.1861.1|Name=mRNA_Ecto-sp13_S_contig1221.1861.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=264bp
MRSSKMDRRRRAAAGGFGCGGVLLCFVMVKMMVGTASAGSIRMTECPPDA
PEATFRWVNEGEYLYVEGAGSCVTLPDIYNAVENPPLTYHTVDGDESDTE
TGIWLMTKNIFMESGTTLLLHDDLGCDELRIISSSTNARHLRAFGAYISL
LRTKLTSWSVGNRAPDNGAYDGLNARSFISAVSEMTHPSDTCDGAADDDA
GEARMDIINSEVAYLGYQAAESYGISYKVRGYCVDESNPEVFDRVNVRGD
IRFSDIHHNWFGQ*
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mRNA from alignment at Ecto-sp13_S_contig1221:892..5341-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig1221.1861.1 ID=mRNA_Ecto-sp13_S_contig1221.1861.1|Name=mRNA_Ecto-sp13_S_contig1221.1861.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4450bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1221:892..5341- (Ectocarpus species13 EcNAP12_S_4_19m)
GAGGAGAGAGGGGGAGAAAACTATGAGATCGTCAAAGATGGATCGGAGGC GGCGGGCGGCTGCGGGAGGGTTCGGGTGCGGTGGTGTGCTGCTGTGCTTC GTAATGGTAAAGATGATGGTCGGCACGGCCTCGGCTGGGAGCATACGGAT GACGGAGTGCCCGCCCGATGCGCCAGAAGCTACCTTTCGCTGGGTGAACG AGGGAGAGTATCTCTACGTTGAAGGAGCGGGGTCTTGTGTGACGCTCCCG GATATCTACAACGCGGTGGAAAACCCTCCGCTCACGTACCACACGGTCGA TGGGGATGAGAGCGACACGGAGACAGGGTAAGAGAGGGTCACTGCTGTGG GTGGGGAGGGATGGCGCTGGAAGGGCTGTTTTCCGTCGAGGTCTTGGGGT CGCTTATCGGTAGTGAGCTGCTGGCCGCTATTGCTGCTGTGGCAATTGGC AGCACAGCCTTTGCGCTGTCCTCTCGCAACAAAGTTGTGCTGTCCTCTCT CATCGTGCCGATTCACCGTACTTTTGATGTTGTGCGGCCCACCACACACG TCACACACGTAAACACAAACAAACGTATCTTACGCCTGTGCCAGAGTTGT GACATGTTGTCTCATGGCAGCTTCTTCCGACGGCGAGACACACAAAAGGA GTCCTGGGGCAGATTCAAGGAGTGGTGGTGTTCGCCCTGAGTTGGCGTGA CCAACGTTCGGCCTGGAAATCGATTTTGCTGCTTGGACACACACACAAAC AGCCCGCGTACTACTGCTGTTGTGCCTATTACCTCCTTCAGCAAGAAATC GATTTTCTTCTTGGGACAAACACACAAACAGCCGGTTAGCGCGGTCGATG CTAATAATAAAAACACATACAAACAGCCCGCGTACTACATGTGCGTACTT CCTCCGGCACATTTCAGAGAGCACCGAGCGGCAGAGCTGTGCCGCAACTG GAGCCATTCCTCCCGAGTCGCACCTCCCCGTGTCTGTAGTGTCTGCCCCT TCCCCATCCTGTCTCTGGAGGGTTGGATAGACAAAGAAGACTTGCGTAGC AGTTCGTGTTCGATACACAAACCGGACCAGACACCTGTAGGGCGCCGAGA ATAAGATAAAATAATGTAAAATCTGACGGGCGGGCTCTGATCAAGAGGCT GCCTGCACCCTGCACCGTTGGGCTGCGAGGTCCGCGGTATTTCGGGCAGA ACTACACTAGACCGAAATAGCTTGGCAAAAAATTGTTGTACAGGCATGCA TAGTTTGATTTATTTTTCTTGCAGAACAAAACCATGCCCTGTCCACCTCC GAAGTCTTGCCCCCACGTTTTCTATATTCTGTGCATATCTGCTGTCGTCA CATACCACACACGAAGGACACCACACTGTTTTGTGACTGCTTCGTGGCAC CCGTTGATGCTGCGCCGGGATTTGGTAGAAACACAAGTATGAAAGCCAAT TCGACAATCAGTATGGATGCTTGGCGAATTGATCGTGAACTCTTCGCTAC GTCTATGGGATAGAGATGAAATTTTTCAGAAATCGTCGAGCGTTGTGTGT ACGTCAACCTCAATCTTCAAGGACAGAGAAGAGTCCTGGACGGAGACGCC CGGGGGTCGGGAGGTATCGTCCCCTGGTTATGCGACCAACGATCCAATCA TCATGCCATGAGAGCAAGAGAAATTAGGAACCCCGTTCGCCTTGCGCGAG GTTGCCTCGTCGTATTGTTTAGGTCACGGTGCGGTGGATTGCATGGAAAC ACTACACCTTCACATGTACCAACGCCTCTTTCCTAACGACAGCATCTGGC TAATGACGAAGAACATCTTCATGGAGAGCGGGACTACCCTGCTGCTTCAC GACGACCTCGGCTGCGATGTGAGTCCAAGAAATCGTACTGGTGCATCCTG TTTTTAGGACCCTGACCCCTAGCTGACTGATGTCTGTGGTGTTCCATGTT CCGTGCCCCCACGGGGTGGAGAGCGGGAGCACTTGACTTGTGTTCATGAC TGCCTCGGCAACGTGTGAATCAAAGCCGAAAGCACGGCTTCTTGCCGAGA CAGCAACCTTGACTTGTCGTGCTCCGATGACACTCAAGTATTTCGATACT CCAATCTTCTTCTGCCTCCGTCAGGCCCCCTGACCTTGCCCACGCCACGT CGCCTCTCGCTTTCGACGTCATCGCGAGAACTTGTAGCATACCTTCCGAC CACCGCAAGTCGGAATGCCATGCCAACTTCTCCTGGAGCTCTCTCGTCTG TCTACCACCGCAAGTCGGAATGCCATGCCAACTTCTCCTGGAGCTCTCTC GTCTGTCTATTCAGATGAAAACTGTTCATGTCAGAAAAACAGATGAGCGA ACATCTGTGCGTCCCCATGTATCGGAGTCGCTTCGAACCGCCAAGGCGTG CGATCGTATACTTTCGGTTTTTTTTTTTTCCTTCTGTGTTCGTCTTTTGC AGGAACTACGGATAATCTCGAGCTCGACAAACGCACGCCATTTGCGAGCG TTCGGAGCGTACATCTCCCTTCTCAGGACAAAGGTGAGCGCGTGGTGGTT AGGTGACGAAAACGGTTACTGCAGTAGACGTAGACCCATGGAACACCATA TCTTGTGCGGGGCTCGCGTGAGAGGAGTGAAAATCTGTGCATCGATTCAT GGAGGCATTTCCTTCCGTGCTATCGCCACCCTTCAAACGAGCCACTCTGT CCATGTTGCCAGGAGCTCATGTTCGCGAGACGTTTTCCTGGATGAATCCG ATCTGAGCTACATAGGTCTTTGCGTATGTATGTCGAAGTTGTTTGACCTG TCTTGGGGGTGATTGTGCTGCGCTTTGGTCTCAACCCCCATGTGAATGGA TCATGCCGCGTTGCTATTGGTATCAAGTCAGCAGGTAACATGTGCTTGGA TCCTCGTCATGTGTAGTTGCAGAGTTGTGTCATGAGTTCTGAAAAGTATG TGCCGAGACCGGTCTCTTCATCATTCCTGATGCTGTTGCCGTAACTGACG TCTGAAGCTGCAGCTGCGTGTCACGAGTTATGAAAACGTGTGCTGGCCCC CGTCTCATTTACCGGTAATCGTGTTCCTGTGTTTGCTGCCTGTGTCTGTA GTTGCAGCACAGGAGAGTAGGACTTGTGAAAATGTGTGCTGAGCTCCCGT GTCTTCTTGACGTTTCTGACGTTCGTTACCGTAGCTGACCTCGTGGAGCG TCGGGAACAGAGCCCCCGACAACGGCGCGTACGATGGACTCAACGCGCGG TCCTTCATCTCGGCGGTGAGCGAGATGACTCACCCGTCCGACACGTGCGA TGGCGCAGCCGATGACGATGCGGGGGAAGCGAGAATGGACAGTGAGTTGT TGGCTCCGTTTGTTGGTGTTGGTGCCTGCTTTGCTTTGTTGGTGGTGGTG GTGGTGGTGTTGGCGCGGTGATGGTTGTTGATGTTGTTGTTGTCTCGTTT TTGTGGTGTTGTTGTCGTGAGGTTGTTGTTGTTGGCAGTTGTTGGCATTG GTGTTGCGGTTGGTGCTGATGTTGGTGTTGGTGTCGATGTTGGTGCTTGT GTTAACGTTGGTGATGGTCTTGGTGCTTGCGTGCTTGCGTTGGTGTTGTT GCTGCTTTCGGGGTTGTTGTCGTTGGACCAGATCGGACCGGAACGATGGC AAAGAAATGCGTTCGTTAGCAAGAAGGTGTGGTCTGTCTCAGCTACGGTC GGTGGGTCGAGCTGCCACGCTCCCAAGACCGTCCCGCCTGTACAGCCGGT GCTCTGCCACCAACATCAGCAGTGGTTGTTCTTGCAGACATGGACATAAT AAGGTTTCGACGTGTGAAATCTTACCGTGTCCCAAGTCTGTCTGTCTGTC TGTCTGCCTCTTCCTCTCTCTCTCCCCCCCCCCCTTCTCCTCCTCCTCCT CCTCGCCCCGCCACGCGCGTGTGCAGTTATCAACAGCGAGGTGGCCTACC TAGGTTACCAGGCAGCGGAATCGTATGGCATCAGCTACAAGGTGTGACCT ACTTGAACTCGATGGAAAAAGGCTTTTCGAACGCTCGCGGAGGTTCGCTG AGAGATGGGTTGCTGCTTGGCTTTTCTTTTTTTGCTCTGTCTGTCCGTGA TTTCGGTTGGTCGATTCCTGGCTTGGGGACAGACCAACGAGAAAATGACA ACAGTTGCCATCAAGAGCAAGCACCAACAGCGGAACAATGGCATCATCCC TCCAGAGCAAGCAACAACGACCGTTACCATCAAGAGCAAGAGTAACGACG AAGCGAGCAACCGACAACAATAGTTGCCAATAACTCACACGACGAAGTAC TAAGAAAGTACAGCACTGAACGATACGTCTTGATGCCCACAGGTGCGAGG ATACTGCGTGGACGAGTCCAACCCGGAGGTGTTCGACCGCGTTAACGTTA GGGGAGACATCCGCTTCTCGGACATACACCACAACTGGTTCGGACAGTGA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1221:892..5341-

>mRNA_Ecto-sp13_S_contig1221.1861.1 ID=mRNA_Ecto-sp13_S_contig1221.1861.1|Name=mRNA_Ecto-sp13_S_contig1221.1861.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=792bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1221:892..5341- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGAGATCGTCAAAGATGGATCGGAGGCGGCGGGCGGCTGCGGGAGGGTT
CGGGTGCGGTGGTGTGCTGCTGTGCTTCGTAATGGTAAAGATGATGGTCG
GCACGGCCTCGGCTGGGAGCATACGGATGACGGAGTGCCCGCCCGATGCG
CCAGAAGCTACCTTTCGCTGGGTGAACGAGGGAGAGTATCTCTACGTTGA
AGGAGCGGGGTCTTGTGTGACGCTCCCGGATATCTACAACGCGGTGGAAA
ACCCTCCGCTCACGTACCACACGGTCGATGGGGATGAGAGCGACACGGAG
ACAGGCATCTGGCTAATGACGAAGAACATCTTCATGGAGAGCGGGACTAC
CCTGCTGCTTCACGACGACCTCGGCTGCGATGAACTACGGATAATCTCGA
GCTCGACAAACGCACGCCATTTGCGAGCGTTCGGAGCGTACATCTCCCTT
CTCAGGACAAAGCTGACCTCGTGGAGCGTCGGGAACAGAGCCCCCGACAA
CGGCGCGTACGATGGACTCAACGCGCGGTCCTTCATCTCGGCGGTGAGCG
AGATGACTCACCCGTCCGACACGTGCGATGGCGCAGCCGATGACGATGCG
GGGGAAGCGAGAATGGACATTATCAACAGCGAGGTGGCCTACCTAGGTTA
CCAGGCAGCGGAATCGTATGGCATCAGCTACAAGGTGCGAGGATACTGCG
TGGACGAGTCCAACCCGGAGGTGTTCGACCGCGTTAACGTTAGGGGAGAC
ATCCGCTTCTCGGACATACACCACAACTGGTTCGGACAGTGA
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