mRNA_Ecto-sp13_S_contig12173.1831.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig12173.1831.1
Unique NamemRNA_Ecto-sp13_S_contig12173.1831.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig12173.1831.1 vs. uniprot
Match: D7G4K4_ECTSI (Spondin domain-containing protein n=3 Tax=Ectocarpus TaxID=2879 RepID=D7G4K4_ECTSI)

HSP 1 Score: 419 bits (1076), Expect = 1.270e-146
Identity = 207/223 (92.83%), Postives = 213/223 (95.52%), Query Frame = 1
Query:    1 MVKFTAGFALASVLSLAHATDFKASELRVRVRNLTYLQPFSPMLVVAHTDDVALFKEGLPANDAIKLMAEDGDNSALLELAASDGVAPFICGAVAGEGPVLPGETWRGTLTIDESVCPDPVYSVVSMLINTNDAFVGIDSDDLNVHGSSKVFPPAFDAGTEANNELCTHIPGPACPADSGNIEDGPGEGFVHVHRGFHGVGPDLGEANYDWRNPVAEVFIARQ 669
            MVKFTAGFALASVLSLAHATDFK     VRVRNLTYLQPFSPMLVVAHT+DVALFKEGLPA+DAIKLMAEDGDNSALLELAASD VAP+ICGAVAGEGPV PGETWRGTLTIDES CPDPVYSVVSMLINTNDAFVGIDSDDLNV+GSSKVFPPAFDAGTEANNELCTHIPGPACPADSGN+ED PGE F+HVHRGFHGVGPDLGEANYDWRNPVAEVFIARQ
Sbjct:    1 MVKFTAGFALASVLSLAHATDFK-----VRVRNLTYLQPFSPMLVVAHTNDVALFKEGLPASDAIKLMAEDGDNSALLELAASDDVAPYICGAVAGEGPVFPGETWRGTLTIDESACPDPVYSVVSMLINTNDAFVGIDSDDLNVYGSSKVFPPAFDAGTEANNELCTHIPGPACPADSGNMEDVPGEEFIHVHRGFHGVGPDLGEANYDWRNPVAEVFIARQ 218          
BLAST of mRNA_Ecto-sp13_S_contig12173.1831.1 vs. uniprot
Match: D7G4K3_ECTSI (Spondin domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4K3_ECTSI)

HSP 1 Score: 331 bits (849), Expect = 2.680e-112
Identity = 155/198 (78.28%), Postives = 176/198 (88.89%), Query Frame = 1
Query:   70 ASELRVRVRNLTYLQPFSPMLVVAHTDDVALFKEGLPANDAIKLMAEDGDNSALLELAASDGVAPFICGAVAGEGPVLPGETWRGTLTIDESVCPDPVYSVVSMLINTNDAFVGIDSDDLNVHGSSKVFPPAFDAGTEANNELCTHIPGPACPADSGNIEDGPGEGFVHVHRGFHGVGPDLGEANYDWRNPVAEVFIA 663
            A E+ VRVRNLTYLQPFSPM VVAHT+DV++F+EG PA+DA+K+MAEDGDNSAL+EL AS+ V P+ICG V GE P+ PG+TWRG +T+DES+CPD  YSVVSMLINTNDAFVGIDS+ L   G+ KVFPPAFDAGTEANNELCTHIPGPACPADSGN+EDGPGEGF+ V RGFHGVGPDLGEANYDWRNPVAEV +A
Sbjct:    4 AGEVYVRVRNLTYLQPFSPMFVVAHTNDVSIFREGFPASDAVKIMAEDGDNSALVELLASEDVEPYICGGVMGEAPLFPGDTWRGVMTVDESICPDAQYSVVSMLINTNDAFVGIDSNRL--VGTEKVFPPAFDAGTEANNELCTHIPGPACPADSGNMEDGPGEGFISVSRGFHGVGPDLGEANYDWRNPVAEVVVA 199          
BLAST of mRNA_Ecto-sp13_S_contig12173.1831.1 vs. uniprot
Match: D7FIE5_ECTSI (Spondin domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIE5_ECTSI)

HSP 1 Score: 330 bits (845), Expect = 2.190e-111
Identity = 161/224 (71.88%), Postives = 188/224 (83.93%), Query Frame = 1
Query:    1 MVKFTAGFALASVLSLAHAT--DFKASELRVRVRNLTYLQPFSPMLVVAHTDDVALFKEGLPANDAIKLMAEDGDNSALLELAASDGVAPFICGAVAGEGPVLPGETWRGTLTIDESVCPDPVYSVVSMLINTNDAFVGIDSDDLNVHGSSKVFPPAFDAGTEANNELCTHIPGPACPADSGNIEDGPGEGFVHVHRGFHGVGPDLGEANYDWRNPVAEVFIAR 666
            MV FTA FA+AS++SLA+A+  D+     +VRVRNLTYLQPFSP L+VAHT DVALFKEG PANDAIKLMAEDGDNSALLEL+ S  VAP+ICG V  EGPV PGETWRG L +D  +CP+PVYSVV+MLINTNDAFVGIDSD L + GS+K FPPAFDAGTE N+E C++IPGP CPA SGN ++GPGEG++HVHRG HGVG DL EA+YDWRNPVAE++I +
Sbjct:    1 MVNFTAAFAMASLVSLANASGKDYNTVPFKVRVRNLTYLQPFSPPLIVAHTKDVALFKEGFPANDAIKLMAEDGDNSALLELSESSDVAPYICGVVVAEGPVFPGETWRGQLDVDPYICPNPVYSVVTMLINTNDAFVGIDSDTLEL-GSTKAFPPAFDAGTEVNDERCSNIPGPGCPAGSGNNQNGPGEGYIHVHRGVHGVG-DLEEASYDWRNPVAEIYIQK 222          
BLAST of mRNA_Ecto-sp13_S_contig12173.1831.1 vs. uniprot
Match: D7G3Z4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3Z4_ECTSI)

HSP 1 Score: 205 bits (521), Expect = 1.190e-61
Identity = 108/197 (54.82%), Postives = 135/197 (68.53%), Query Frame = 1
Query:   82 RVRVRNLTYLQPFSPMLVVAHTDDVALFKEGLPANDAIKLMAEDGDNSALLELAASDGVAPFICGAVAGEGPVLPGETWRGTLTIDESVCPDPVYSVVSMLINTNDAFVGIDSDDLNVHGSSKVFPPAFDAGTEANNELCTHIPGPACPADSGNIED-GPG-EGFVHVHRGFHGVGPDLGEANYDWRNPVAEVFIAR 666
            +VRV NLT+ Q FSP ++VAH     LF  G  A  AIKLMAEDG+N  ++ +A  +G     CG  A EGP+LPG+TW G +T D   C +PVYSVV+ L NTNDAF+GID         SK+FPPAFDAGTE NNE CT +PG ACPA   + E+ G G EGF+HVHRG +GVG DL +A+Y W+NPVAEV +++
Sbjct:   76 KVRVTNLTFKQDFSPPIIVAHEKGSHLFPVGGKARPAIKLMAEDGNNRNIMAIATREG---GFCGFAAAEGPLLPGKTWNGEITFDTDKCKEPVYSVVAKLTNTNDAFMGIDGSKFLDKHPSKLFPPAFDAGTEKNNEKCTCMPGRACPASPKSRENHGLGSEGFIHVHRGINGVG-DLSKADYGWKNPVAEVVVSK 268          
BLAST of mRNA_Ecto-sp13_S_contig12173.1831.1 vs. uniprot
Match: D7G413_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G413_ECTSI)

HSP 1 Score: 196 bits (499), Expect = 3.080e-59
Identity = 108/200 (54.00%), Postives = 133/200 (66.50%), Query Frame = 1
Query:   82 RVRVRNLTYLQPFSPMLVVAHTDDVALFKEGLPANDAIKLMAEDGDNSALLELAAS--DGVAPFICGAVAGEGPVLPGETWRGTLTIDESVCPDPVYSVVSMLINTNDAFVGIDSDDLNVHGSSKVFPPAFDAGTEANNELCTHIPGPACPADSGNIEDGPG---EGFVHVHRGFHGVGPDLGEANYDWRNPVAEVFIAR 666
            +VRV NLT+ Q FSP ++VAH     LF +G  A  AIK MAE+G N   +E+ A+  DG     CG  A EGP+LPG+TW G +T D + C  PVYSVV+ L NTNDAF+GID         SK+FPPAFDAGTE NNE CT I G ACPA     E+  G   EGF+HVHRG +GVG DL +A+YDW+NPVAEV +++
Sbjct:    5 KVRVTNLTFKQDFSPPIIVAHEKGSPLFSKGRKARGAIKRMAEEGVNR-FIEIIATREDG----FCGFAAAEGPLLPGKTWNGEITFDANKCKRPVYSVVAKLTNTNDAFMGIDGSKFLDKRPSKLFPPAFDAGTEKNNEKCTCIRGRACPASPKPRENLGGRGSEGFIHVHRGINGVG-DLSQADYDWKNPVAEVVVSK 198          
BLAST of mRNA_Ecto-sp13_S_contig12173.1831.1 vs. uniprot
Match: D7G405_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G405_ECTSI)

HSP 1 Score: 189 bits (480), Expect = 3.190e-56
Identity = 109/216 (50.46%), Postives = 134/216 (62.04%), Query Frame = 1
Query:   37 VLSLAHATDFKASELR---VRVRNLTYLQPFSPMLVVAHTDDVA-LFKEGLPANDAIKLMAEDGDNSALLELAASDGVAPFICGAVAGEGPVLPGETWRGTLTIDESVCPDPVYSVVSMLINTNDAFVGIDSDDLNVHGSSKVFPPAFDAGTEANNELCTHIPGPACPADSGNIED-GPG-EGFVHVHRGFHGVGPDLGEANYDWRNPVAEVFIAR 666
            +LSLA       S ++   VRV NLT+ Q FSP ++VAH      LF  G  A  AIK MAE+G N  +  +A  +      CG    EGP+LPG+TW G +T D + C +PVYSVV+ L NTNDAF+GID         SK FPPAFDAGTE NNE CT +PG ACPA     E+ G G EGF+HVHRG  GVG DL +A+Y W NPVAEV +++
Sbjct:    1 MLSLASGGSTSGSSMKTYKVRVTNLTFKQDFSPPIIVAHEKGSRPLFSMGGKARPAIKRMAEEGVNGMVKVIATRES---GFCGFAVAEGPLLPGKTWNGEITFDTNKCKEPVYSVVAKLTNTNDAFMGIDGSKFLDKCPSKRFPPAFDAGTEKNNEKCTCMPGRACPASPKTRENHGRGSEGFIHVHRGIDGVG-DLSKADYGWNNPVAEVVVSK 212          
BLAST of mRNA_Ecto-sp13_S_contig12173.1831.1 vs. uniprot
Match: D7G3Z6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3Z6_ECTSI)

HSP 1 Score: 179 bits (455), Expect = 2.910e-52
Identity = 107/232 (46.12%), Postives = 142/232 (61.21%), Query Frame = 1
Query:    1 MVKFTAGFALASVLSLAHATDFKASEL---RVRVRNLTYLQPFSPMLVVAHTDDVA-LFKEGLPANDAIKLMAEDGDNSALLELAASDGVAPFICGAVAGE--GPVLPGETWRGTLTIDESVCPDPVYSVVSMLINTNDAFVGIDSDDLNVHGS-SKVFPPAFDAGTEANNELCTHIPGPACPADSGNIEDGPG---EGFVHVHRGFHGVGPDLGEANYDWRNPVAEVFIAR 666
            MVKF  G ALAS+LSLA  +  + S +   +VRV NLT+ Q FS  ++VAH      LF EG  A +AI ++AE+G +  +  +A  +      CG  A E  G + PG+TW G +  D + C DPVYSVV+ L NTNDAF+GI           SK FPPAFDAG+E NNE CT +PG ACP  + +  +  G   EGF+HVHRGF G+G DL + +Y W+NPVA V +++
Sbjct:    1 MVKFAFGLALASMLSLASGSKMRGSRMQTYKVRVTNLTFKQDFSAAIIVAHEKGSRPLFSEGAKARNAISMLAEEGLSGNVQNIATRE---RGFCGFAAPESKGLIFPGKTWEGKIQFDANKCKDPVYSVVAKLDNTNDAFMGIAGSKFPAGSCPSKHFPPAFDAGSETNNEKCTCMPGRACPKGTRDARERHGRNSEGFIHVHRGFQGIG-DLSK-DYGWQNPVAVVVVSK 227          
BLAST of mRNA_Ecto-sp13_S_contig12173.1831.1 vs. uniprot
Match: A0A433PQD1_9FUNG (Spondin domain-containing protein n=1 Tax=Endogone sp. FLAS-F59071 TaxID=2340872 RepID=A0A433PQD1_9FUNG)

HSP 1 Score: 156 bits (395), Expect = 2.770e-43
Identity = 93/212 (43.87%), Postives = 126/212 (59.43%), Query Frame = 1
Query:   43 SLAHATDFKASELRVRVRNLTYLQPFSPMLVVAHTDDVALFKEGLPANDAIKLMAEDGDNSALLELAASDGVAPFICGAVAGEGPVLPGETWRGTLTIDESVCPDPVYSVVSMLINTNDAFVGIDSDDLNVHGSSKVFPPAFDAGTEANNELCTHIPGPACPADSGNIEDGPGEGFVHVHRGFHGVG---PDLGEANYDWRNPVAEVFIARQ 669
            ++A  T++      + V+NL YLQPFSP+L V H   + LF+ G PA+ A++ +AE GD S  + L   DG+   ICG     G  LP  T++GT+TI +  C +P  S+V+ML  TNDAF GI++  L    S +   PA+DAGTE NNE C ++ G  CP        G GEGFVHVHRG HG+    P L   +YDWRNPVA + ++ Q
Sbjct:   16 AVALPTEYVGKTFDITVQNLAYLQPFSPVLAVIHEPSIYLFQLGTPASAALRAVAEGGDPSKFVALF-QDGLEG-ICGWSVAPGKTLPSTTYKGTVTISKP-CTNPHISIVNMLGITNDAFTGINTIPLYGELSKRFEVPAYDAGTEENNEDCQYVFG--CPGSPNLDTPGLGEGFVHVHRGVHGLNVSKPGL-SVDYDWRNPVAYITVSVQ 221          
BLAST of mRNA_Ecto-sp13_S_contig12173.1831.1 vs. uniprot
Match: A0A433DJ30_9FUNG (Spondin domain-containing protein n=2 Tax=Jimgerdemannia flammicorona TaxID=994334 RepID=A0A433DJ30_9FUNG)

HSP 1 Score: 142 bits (359), Expect = 5.480e-38
Identity = 86/212 (40.57%), Postives = 117/212 (55.19%), Query Frame = 1
Query:   37 VLSLAHATDFKASELRVRVRNLTYLQPFSPMLVVAHTDDVALFKEGLPANDAIKLMAEDGDNSALLELAASDGVAPFICGAVAGEGPVLPGETWRGTLTIDESVCPDPVYSVVSMLINTNDAFVGIDSDDLNVHGSSKVFPPAFDAGTEANNELCTHIPGPACPADSGNIEDGPGEGFVHVHRGFHGVG---PDLGEANYDWRNPVAEVFIA 663
            ++++A   D  A    + V NL+Y Q F+P+L V H   V +FK G PA+  ++ +AEDG+ +  ++L  S      ICG   G     PG+T+ G +TI +  C DP  S+VSML  +NDAF GI S  L+V         A+DAGTE NNE C ++   AC         G GEGFVHVHRG HG+    P L    YDWR PVA + ++
Sbjct:   14 LVAIASPVDHVAQTFAITVENLSYKQIFTPVLTVIHEPSVTIFKTGTPASLELQYVAEDGNATTFVQLFESG--LSGICGWSVGSELTFPGKTYNGNVTITKP-CQDPHISIVSMLGISNDAFTGISSVPLDVQHKISEQVTAYDAGTEENNEDCVYVG--ACAGSHNLRTPGLGEGFVHVHRGIHGLNVTKPGL-SVEYDWRFPVAYITVS 219          
BLAST of mRNA_Ecto-sp13_S_contig12173.1831.1 vs. uniprot
Match: A0A0S8ARA7_9BACT (Spondin domain-containing protein n=1 Tax=Nitrospira bacterium SG8_35_4 TaxID=1704025 RepID=A0A0S8ARA7_9BACT)

HSP 1 Score: 134 bits (336), Expect = 1.590e-34
Identity = 78/193 (40.41%), Postives = 117/193 (60.62%), Query Frame = 1
Query:   91 VRNLTYLQPFSPMLVVAHTDDVALFKEGLPANDAIKLMAEDGDNSALLELAASDGVAPFICGAVAGEGPVLPGETWRGTLTIDESVCPDPVYSVVSMLINTNDAFVGIDSDDLNVHGSSKVF-PPAFDAGTEANNELCTHIPGPACPADSGNIEDGPGEGFVHVHRGFHGVGPDLGEANYDWRNPVAEVFIAR 666
            V N+T  Q F+P+LV+ H   V+LF  G PA+ A+  +AE GD   L E+ + +   P +   V  +G + PGET   T+ I +S     + S+ +M+I TND F+ ++       G++ ++  PA+DAG+E N+ELC +IPGP C  ++ + EDG  EG+V +H G HG+G  L E+ YDWRNPVA + I R
Sbjct:   35 VTNMTKGQTFTPILVLTHRRGVSLFTPGSPASMALAALAEAGDTGPLTEMMSMN---PGVRDIVTSDGLLFPGET--KTIMIPQSERYRYI-SIAAMIIPTNDGFIALNGVQAPAGGNAVMYLSPAYDAGSEMNDELCDNIPGPVCGGEAISEEDG--EGYVRIHEGIHGIG-SLDESIYDWRNPVARIVIQR 218          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12173.1831.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G4K4_ECTSI1.270e-14692.83Spondin domain-containing protein n=3 Tax=Ectocarp... [more]
D7G4K3_ECTSI2.680e-11278.28Spondin domain-containing protein n=1 Tax=Ectocarp... [more]
D7FIE5_ECTSI2.190e-11171.88Spondin domain-containing protein n=1 Tax=Ectocarp... [more]
D7G3Z4_ECTSI1.190e-6154.82Uncharacterized protein n=2 Tax=Ectocarpus silicul... [more]
D7G413_ECTSI3.080e-5954.00Uncharacterized protein n=2 Tax=Ectocarpus silicul... [more]
D7G405_ECTSI3.190e-5650.46Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G3Z6_ECTSI2.910e-5246.12Uncharacterized protein n=2 Tax=Ectocarpus silicul... [more]
A0A433PQD1_9FUNG2.770e-4343.87Spondin domain-containing protein n=1 Tax=Endogone... [more]
A0A433DJ30_9FUNG5.480e-3840.57Spondin domain-containing protein n=2 Tax=Jimgerde... [more]
A0A0S8ARA7_9BACT1.590e-3440.41Spondin domain-containing protein n=1 Tax=Nitrospi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12173contigEcto-sp13_S_contig12173:785..4427 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score421.8
Seed ortholog evalue2e-115
Seed eggNOG ortholog2880.D7G4K4
Model size863
Hectar predicted targeting categorysignal peptide
Exons6
EggNOG OGs28TMI@1,2S5Q9@2759
Ec32 ortholog descriptionSpondin, N-terminal
Ec32 orthologEc-07_000280.1
Cds size672
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12173.1831.1prot_Ecto-sp13_S_contig12173.1831.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig12173 976..4427 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462646.6732624-UTR-Ecto-sp13_S_contig12173:784..9751681462646.6732624-UTR-Ecto-sp13_S_contig12173:784..975Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig12173 785..975 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462646.6864142-CDS-Ecto-sp13_S_contig12173:975..11721681462646.6864142-CDS-Ecto-sp13_S_contig12173:975..1172Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12173 976..1172 -
1681462646.6980348-CDS-Ecto-sp13_S_contig12173:1777..18671681462646.6980348-CDS-Ecto-sp13_S_contig12173:1777..1867Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12173 1778..1867 -
1681462646.7091587-CDS-Ecto-sp13_S_contig12173:2123..22741681462646.7091587-CDS-Ecto-sp13_S_contig12173:2123..2274Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12173 2124..2274 -
1681462646.7179353-CDS-Ecto-sp13_S_contig12173:2683..27671681462646.7179353-CDS-Ecto-sp13_S_contig12173:2683..2767Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12173 2684..2767 -
1681462646.731083-CDS-Ecto-sp13_S_contig12173:3880..39461681462646.731083-CDS-Ecto-sp13_S_contig12173:3880..3946Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12173 3881..3946 -
1681462646.742896-CDS-Ecto-sp13_S_contig12173:4343..44271681462646.742896-CDS-Ecto-sp13_S_contig12173:4343..4427Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12173 4344..4427 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig12173.1831.1

>prot_Ecto-sp13_S_contig12173.1831.1 ID=prot_Ecto-sp13_S_contig12173.1831.1|Name=mRNA_Ecto-sp13_S_contig12173.1831.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=224bp
MVKFTAGFALASVLSLAHATDFKASELRVRVRNLTYLQPFSPMLVVAHTD
DVALFKEGLPANDAIKLMAEDGDNSALLELAASDGVAPFICGAVAGEGPV
LPGETWRGTLTIDESVCPDPVYSVVSMLINTNDAFVGIDSDDLNVHGSSK
VFPPAFDAGTEANNELCTHIPGPACPADSGNIEDGPGEGFVHVHRGFHGV
GPDLGEANYDWRNPVAEVFIARQ*
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mRNA from alignment at Ecto-sp13_S_contig12173:785..4427-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig12173.1831.1 ID=mRNA_Ecto-sp13_S_contig12173.1831.1|Name=mRNA_Ecto-sp13_S_contig12173.1831.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3643bp|location=Sequence derived from alignment at Ecto-sp13_S_contig12173:785..4427- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGTCAAGTTCACTGCCGGATTCGCTCTCGCCTCGGTGCTCTCCTTGGC CCACGCCACTGACTTCAAGGCGAGTGAGCTGCGTGTCAGCCGTTGCCATC AATAACAATAAGCGACTTTGTCGTGTGTCGTGTGTCGTGTGTCGTGTTTC TCATGTCTCTCGTTTGTAGTCGAGGGACTTGCGTTCTTTTTTTTTCATGT GCTACCTGACGCAGGATCAAACGGTGTGCCGTGTGCTGTCGTTGTCGCCA TGCACAGTAGTCGTAGCGTCTCGAGTCACAGCACCGCGAGTTCACTTGAG CTACGAAGACCACAGGCGTTACCGCTGCTGCTGTGCTGTGTCATGAAACC TGCTCTGTGTGTTCTGTTCTCGTTCGGCGCCCTCGTTGAATCTTTCTTCA AGTATAGACTAAACAACACCCCGTTCTCCCGTGTTTCCCCGTCGTATCCT ATGTCTCCTGTACTTTCATCTCTGATCACAGGTTCGCGTGAGGAACCTGA CCTACCTGCAGCCCTTCTCGCCCATGCTCGTCGTGGCGCATACCGACGTG AGTTAACTACACTGCTTGTCCATCGCGAGCTAGGTGTGCGGTCCGTAGAC CACAGCAATACTTTGCGAGGAGACTATTTCGTCTCTCCTTGCAACAATTT GCGAAGCAGGTATCTTGCTGGTAAATACGTGCAAAACGTGTGCAGCATGG TCTTCGTCAGCCGGTCAGCCCCATTCGATACGTACGACGCATATATCTAT CCATCACTGCCAGGCGCAGAGAAGAAGTAGCCTGCAGATGGTGGTGGAGA CAGCTGCCTCCTGGCCACAACAACTGTATGTATCTACCTGAGTTGCTCAC AATTGATACTTACTCGGTATTCGTCAGCACAGAGCCTCCCGCTTTTCGCT CGACGTAGATCACAGGTCGTTGGCGGGGTCCGACAACAGTATATCTTGGA GATACGATAAGTGAGCAGCACAAACGGCCGTACTTGTCATTGAGTAACAT AGGAACAATTGCCGAATACCCTACTCCCAGCACCGCGGAAGGGACGTTTT CTTTTCTTTCGTTCGTCCGGTGTGATATCCTCGAGACAGCGTCAAAAGCA AAAAGGTGGCCTGGTATCCGGACGGTGTGAGCCGTTGTTCAAGAGTATAT GGGATAAACGCAACCAACAACGACTGCGTCAGAACGCATCCGCACCACGG CGGTCAAAGTGTACGCGCTTTTTCTAGCAAGAGGTGGCGAGATTTTGGAC GTTTTCGCGTGGAGGAAAAACCGGGAGATCCTCTTCGATGGTTTGCGCAC TTCTGGCAGAAATCCTTCATCGCTCTTCAGACCCCAGTGCACCCCTTTCG GGACCTGTAGAGTCGATCAGAGTCGGAAGGAGTAAGTAGTTGACTTCAGG TCTAACTTTGATGTTTAGGACGTACTGCTGTATTAAGGACTTTTCAACGC TTCAATGAGCAACAATAATCCGCTGTACGTGCGCGCAAGATGCTGTTGTT GAGGAGATGGGAAAAATAGCAACCCCCGCCCTGCCTCTCTCATTCACACT CAGAGAAAGCGACGGTTTGCTGACAGATCCTGTTTCGTCTGTGTCGTTCA AAATCGTGTGTCTGTATGTATCATCTTCTTGTTTTCATTTTATATTTGTC CCGTCTACAGGACGTGGCCCTGTTCAAGGAGGGCTTGCCGGCCAACGATG CCATCAAGCTCATGGCGGAGGACGGCGACAACTCGGCTCTCCTTGTGAGT TCTGGTGCTCGCTCTTGCGGACACATGCCGTAGTTCCGCGTTGCGAAATT TTGGTCGACCCATTGATGGAAATTTTTGCACGGGTGGTCCCGAAACCGTC ACGAGCGAGAGAGTGCGCGGGCAACACCAGCCCCTCTTGACTTGATGTTC AGATCGGGTCAGGTCATGCGGTAATCACGAGGTTCTACTCAATAAACTAG TGTTCATCCCTATCCCACGCTTCTACGCCCCCACTCGAGAGAAAACGTGG TTCCAATGCCGTTGTGTCTAGGTCAGTGACATGGTCAGGAGCTGAGCATT CTTTCGTCGACAATGTTCTACGAAGTACTAGTATTCGTGCGCTGACGATT TTCTATATAATAATGATGTGCTATCTCGGTGTTTTATCTGATCCATGGAG CAGGAGCTTGCGGCGTCGGACGGCGTGGCCCCATTTATCTGCGGTGCCGT CGCGGGAGAAGGCCCTGTCCTGCCCGGAGAGACGTGGAGAGGAACTCTGA CCATCGACGAGAGCGTCTGCCCCGACCCGGTGTACAGCGTCGTCAGCATG CTCAGTGAGTTGCAGAACATGCATGTTGTTGGCATCGATTGCACACAAGC TCTTGTTGTGTACTCGTGGGCAAAGAACGTCATCCCGGCACGATGAATTG GAAATAGGGCGTGTTCGAACAACTTGAGGGGTTCTACACGTCGCTGATGC TCCACACGTGTGACTTCAGGCCATGAAACGAAGTCCAATGTTGTGTCCCA CCCCCATTCAACCATCTAACCCGTCTCTACTCGCTTGTCGACTCGGTGGG TTTGTTGCAGTCAACACCAACGACGCCTTTGTGGGCATCGACTCTGACGA CCTCAACGTGCACGGCAGCTCCAAGGTGTTCCCGCCCGCCTTCGATGCCG GTAAGGATGACGAGGGTTGATTTTGAGCTAATACGTCATGCTGTGTTCAA CATCCAAGTGAGTTTTGTCCTCCCAGCCCTTGGCGGTGATCGTAGCTTCG TCTCGTGTGCTCAACCATCCCGGGAGTTTCCATGGGCCAAGCCTGTTGAG TTTTCCCACCCGGGTGAAGCGGGTTTGCCTCAGTGGTGTGATATTAGTGC GCTGATCTTTGTTTTTTTATTTCTCTCGCCCACGCCAGGGCGCACTACTG TAGTAGCTTCATTTTGTGTTTGCATCCGTCACGGTGTTGATTGAGCCCTT TCTCAGGTCGAACTCGAACGATTCGAGGCACAGCTGACCACAAGAATCCA TGCTTGCACCTTTTTTTTCTTGGGGGGTGTGCCGGACGCTTCGGGAATAG GGTATGGGGATGCACGGCATTTGCAGGCCCGCCTTGGAGGTTGGTTTGTG GCACTCCACGTCGGCAAGAAATGCGGAACCTGCTACGCGACATACTGAGT ACAGAATCTTTACCCATCGCTGTACCTTTTTTTCTGGACGCTCGCCTGAA CACCAACGCCCAACCTTCTTTGCTTCCCGATGGGTCGGATCCACCGACGT TTCAGGCACCGAGGCCAACAACGAGCTGTGCACCCACATCCCTGGCCCTG CGTGCCCGGCCGACAGCGGCAACATCGAGGACGGACCCGGCGAAGGGTTT GTCCATGTGCACCGCGGCTTCCACGGGGTGGGGCCGGACCTGGGCGAGGC CAACTACGACTGGCGCAACCCGGTCGCCGAGGTCTTCATCGCTCGCCAGT AGACGGTTCTCGTAACAAGAGTGATGCAGGCCGAGCATACGGCGGCGTCG GCGTCGCCCTAGAGTTTCATGTTGTTCGGTTTCATGTGTTGATGGCGTTG CGCACCGGCGTCAATCGTACTTGACGGTCTCGCGTTGGACGATCGTGTTT CGTTTTTTCCGTTTTCAGCGTGTTTTGCTGGGAGCGGTGAATG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig12173:785..4427-

>mRNA_Ecto-sp13_S_contig12173.1831.1 ID=mRNA_Ecto-sp13_S_contig12173.1831.1|Name=mRNA_Ecto-sp13_S_contig12173.1831.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=672bp|location=Sequence derived from alignment at Ecto-sp13_S_contig12173:785..4427- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGTCAAGTTCACTGCCGGATTCGCTCTCGCCTCGGTGCTCTCCTTGGC
CCACGCCACTGACTTCAAGGCGAGTGAGCTGCGTGTTCGCGTGAGGAACC
TGACCTACCTGCAGCCCTTCTCGCCCATGCTCGTCGTGGCGCATACCGAC
GACGTGGCCCTGTTCAAGGAGGGCTTGCCGGCCAACGATGCCATCAAGCT
CATGGCGGAGGACGGCGACAACTCGGCTCTCCTTGAGCTTGCGGCGTCGG
ACGGCGTGGCCCCATTTATCTGCGGTGCCGTCGCGGGAGAAGGCCCTGTC
CTGCCCGGAGAGACGTGGAGAGGAACTCTGACCATCGACGAGAGCGTCTG
CCCCGACCCGGTGTACAGCGTCGTCAGCATGCTCATCAACACCAACGACG
CCTTTGTGGGCATCGACTCTGACGACCTCAACGTGCACGGCAGCTCCAAG
GTGTTCCCGCCCGCCTTCGATGCCGGCACCGAGGCCAACAACGAGCTGTG
CACCCACATCCCTGGCCCTGCGTGCCCGGCCGACAGCGGCAACATCGAGG
ACGGACCCGGCGAAGGGTTTGTCCATGTGCACCGCGGCTTCCACGGGGTG
GGGCCGGACCTGGGCGAGGCCAACTACGACTGGCGCAACCCGGTCGCCGA
GGTCTTCATCGCTCGCCAGTAG
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