mRNA_Ecto-sp13_S_contig1213.1808.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1213.1808.1 vs. uniprot
Match: D7FX85_ECTSI (Excinuclease ABC subunit C n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FX85_ECTSI) HSP 1 Score: 1421 bits (3679), Expect = 0.000e+0 Identity = 750/801 (93.63%), Postives = 767/801 (95.76%), Query Frame = 1
Query: 1 QRIDYIVTASGAEALLLEASLIRQHQPPFNVLLKDDKQNYPYVCVTWSEPYPRVLITRDKPRRGGGSEDRYYGPFVDAGQVKSTVALVRRVLPLRERARPLYKDKPCLNYDMGICPGPCQGLVSEEDYAETVRLAEMVFRGEGSQLLSTLQGRMESESRAERFERAGEIKEQMALVRGGLLGSSLHFSAGGVAAGSGGDRGGLQPRGDGARASSAEGGGSRRDVVAVGLAGGLACFQVFQVRGGRLIGRLGFTYRVEDEGLSRGEVLQACLERYWGDVLKSAPTVAGGVGDERGDNLPSRTLNGNAGAKGGKGGDFSVLDVPEEIVTADALPEGGAVLLAELLSGARKAAADAQRGAQATGWGEGGSPRDLTTEKTTTGKTARGKRSVDKSYPPAVAVRVVHGESGAGERHHLCVMALKNAELEAKRLLQGGESTAWGLSQLARMLGLASSPARIEGYDVSHTGGGNAVASLVCFLNGKASPNNHRRYRIRSPGIRKGHSDDYASLREVIARRFSPPTPPLRSPPPPSQANPVPELVLIDGGKGQLAAALEGAAIAADAWLSVERGGTTTLTGSDTEPAVGAAAAVDTGPPGAPPLESRELAGTALVDDAVRRDQASWSTLPSLVGERTAQEEDPDAVLSTAATPPPEPSDGDVAGARSVDVGGGRRATFVSLAKKEEEVYVPGSSEALAAALEAGPSSPGVMLLRQVRDEAHRFAVAYHRKLRGKDMFLPGRDTVSTQETDSVNGGG-QQAFESIAGLSSKARHELTITFGSLEGARIAGEAELRRIPGIGPVLAKRIMA 2400
+RIDYIVTASGAEALLLEASLIRQHQPPFNVLLKDDKQNYPYVCVTWSEPYPRVLITRDKPRRGGGSEDRYYGPFVDAGQVKSTVALVRRVLPLRERARPLYKDKPCLNYDMGICPGPCQGLVSEEDYAETVRLAEMVFRGEGSQLLSTLQGRMESESRAERFERAGEIK QM LVRGGLLGSSLHFSAGGVAAG GGDRGGLQPRGDGARASSAEGGGSRRDVVAVGLAG LACFQVFQVRGGRLIGRLGFTYRVE+EGLSRGEVLQACLERYWGDVL SA T AGGVGDERGDNLPSRTLNGN GAKGG+GG FSVL VPEEIVTADALP+GGAVLLAELLSGARKAAADAQRGAQATG GEGGSPRDLTTEK TTGKTAR KRSVDKSYPPAVAVRVVHGESGAGERHHLCVMALKNAELEAKRLL+GGES A GLSQLARMLGL S+PARIEGYDVSHTGGGNAVASLVCFL+GKASP +HRRYRIRSPGIRKGHSDDYASLREVIARRFSPPTP LRSP PPSQANPVPELVLIDGGKGQLAAALEGAAIAADAWLSVERGGTTTLTG DTEPAVGAAAAVDT PGAPP+ESRELAGT L+DDAVRRD+ASWS LP L+GERTAQEEDPDAVLSTAA PPPEPSDGDVAGARSV VGGGRR TFVSLAKKEEEVYVPGSSE LAAALEAGPSSPGVM+LRQVRDEAHRFAVAYHRKLRG DMFLPGR TV+T+ETDSVNGGG QQ F +IAGLSSKARHELTITFGSLEGARIAGEAELRRIPGIGPVLAKRI+A
Sbjct: 90 ERIDYIVTASGAEALLLEASLIRQHQPPFNVLLKDDKQNYPYVCVTWSEPYPRVLITRDKPRRGGGSEDRYYGPFVDAGQVKSTVALVRRVLPLRERARPLYKDKPCLNYDMGICPGPCQGLVSEEDYAETVRLAEMVFRGEGSQLLSTLQGRMESESRAERFERAGEIKAQMTLVRGGLLGSSLHFSAGGVAAGGGGDRGGLQPRGDGARASSAEGGGSRRDVVAVGLAGDLACFQVFQVRGGRLIGRLGFTYRVEEEGLSRGEVLQACLERYWGDVLMSARTAAGGVGDERGDNLPSRTLNGNPGAKGGRGGGFSVLHVPEEIVTADALPDGGAVLLAELLSGARKAAADAQRGAQATGPGEGGSPRDLTTEKATTGKTARSKRSVDKSYPPAVAVRVVHGESGAGERHHLCVMALKNAELEAKRLLRGGESIARGLSQLARMLGLGSNPARIEGYDVSHTGGGNAVASLVCFLDGKASPKDHRRYRIRSPGIRKGHSDDYASLREVIARRFSPPTPSLRSPRPPSQANPVPELVLIDGGKGQLAAALEGAAIAADAWLSVERGGTTTLTGFDTEPAVGAAAAVDTKSPGAPPVESRELAGTPLLDDAVRRDEASWSALPPLLGERTAQEEDPDAVLSTAAVPPPEPSDGDVAGARSVGVGGGRRVTFVSLAKKEEEVYVPGSSEPLAAALEAGPSSPGVMVLRQVRDEAHRFAVAYHRKLRGNDMFLPGRGTVATEETDSVNGGGGQQDFAAIAGLSSKARHELTITFGSLEGARIAGEAELRRIPGIGPVLAKRILA 890
BLAST of mRNA_Ecto-sp13_S_contig1213.1808.1 vs. uniprot
Match: A0A1Z3HQZ6_9CYAN (UvrABC system protein C n=1 Tax=Halomicronema hongdechloris C2206 TaxID=1641165 RepID=A0A1Z3HQZ6_9CYAN) HSP 1 Score: 332 bits (850), Expect = 7.480e-100 Identity = 260/797 (32.62%), Postives = 357/797 (44.79%), Query Frame = 1
Query: 7 IDYIVTASGAEALLLEASLIRQHQPPFNVLLKDDKQNYPYVCVTWSEPYPRVLITRDKPRRGGGSEDRYYGPFVDAGQVKSTVALVRRVLPLRERARPLYKDKPCLNYDMGICPGPCQGLVSEEDYAETVRLAEMVFRGEGSQLLSTLQGRMESESRAERFERAGEIKEQMALVRGGLLGSSLHFSAGGVAAGSGGDRGGLQPRGDGARASSAEGGGSRRDVVAVGLAGGLACFQVFQVRGGRLIGRLGFTYRVEDEGLSRGEVLQACLERYWGDVLKSAPTVAGGVGDERGDNLPSRTLNGNAGAKGGKGGDFSVLDVPEEIVTADALPEGGAVLLAELLSGARKAAADAQRGAQATGWGEGGSPRDLTTEKTTTGKTARGKRSVDKSYPPAVAVRVVHGESGAGERHHLCVMALKNAELEAKRLLQGGESTAWGLSQLARMLGLASSPARIEGYDVSHTGGGNAVASLVCFLNGKASPNNHRRYRIRSPGIRKGHSDDYASLREVIARRFSPPTPPLRSPPPPSQANPV-PELVLIDGGKGQLAAALEGAAIAADAWLSVERGGTTTLTGSDTEPAVGAAAAVDTGPPGAPPLESRELAGTALVDDAVRRDQASWSTLPSLVGERTAQEEDPDAVLSTAATPPPEPSDGDVAGARSVDVGGGRRATFVSLAKKEEEVYVPGSSEALAAALEAGPSSPGVMLLRQVRDEAHRFAVAYHRKLRGKDMFLPGRDTVSTQETDSVNGGGQQAFESIAGLSSKARHELTITFGSLEGARIAGEAELRRIPGIGPVLAKRI 2394
I++IVT + AEAL LEA+L++QHQP FNVLLKDDK+ YPY+C+TWSE YPR+ ITR K RRG G +DRYYGP+VD G ++ T+ALV+R+ PLR+R +PL+KD+PCLNYD+G CPG CQ L++ ++Y TV+ MVF+G +L+S L +MES + +FE+A +++Q+ + + V+ RD +A+ AC Q+FQVR GRL+GRLGF + G G++LQ LE ++ V +++P I+ LP+G +L LS QR RG++ V + V +S A L M +NA+ E R + + A L LA ML L P RIEGYD+SH G +AVAS V F +G A+ ++R Y+I++P +R GHSDD+ASL EV+ RRF P P NP P+LV+IDGGKGQL+A +E V R S L VSLAKK EE++ PG S L + P+ PGV LLR++RDEAHRFAV++HR+ R M + I GL + EL TF S++ R A A+L +PGIGP LA++I
Sbjct: 77 IEFIVTDTEAEALALEANLVKQHQPHFNVLLKDDKK-YPYLCITWSEAYPRLFITR-KRRRGKG-QDRYYGPYVDVGLLRRTLALVKRIFPLRQRPQPLFKDRPCLNYDIGRCPGVCQQLITSQEYHRTVQRVAMVFQGRTQELVSMLTQQMESAAAELKFEQAARLRDQIRGLERLCADQKVALPDDTVS----------------------------RDAIALAADAHHACVQIFQVRAGRLVGRLGFVADIHSGG--PGDILQRVLESHYQSV--------------------------------------DAVEIPAVILCQHDLPDGE--ILGNYLS---------QR---------------------------RGRK---------VTLEVPQRQSKAS----LVEMVERNAQYELARTQRFADRNAQALLDLAEMLDLPDLPRRIEGYDISHVQGADAVASQVVFTDGMAAKQHYRHYKIKNPEVRAGHSDDFASLAEVMGRRFRRYA---ADPQKPRLGNPDWPDLVMIDGGKGQLSAVVE-----------------------------------------------------------VLRQMNLLSDL-----------------------------------------------RVVSLAKKREEIFTPGVSTPL----DTDPNQPGVQLLRRLRDEAHRFAVSFHRQQRSDRMR-------------------RSRLSDIPGLGRHRQKELLATFRSIDYIREASPAQLATVPGIGPQLAQQI 619
BLAST of mRNA_Ecto-sp13_S_contig1213.1808.1 vs. uniprot
Match: UPI001A07F103 (Excinuclease ABC subunit UvrC n=1 Tax=Leptolyngbyaceae cyanobacterium T60_A2020_046 TaxID=2747813 RepID=UPI001A07F103) HSP 1 Score: 323 bits (829), Expect = 1.250e-96 Identity = 253/800 (31.62%), Postives = 360/800 (45.00%), Query Frame = 1
Query: 7 IDYIVTASGAEALLLEASLIRQHQPPFNVLLKDDKQNYPYVCVTWSEPYPRVLITRDKPRRGGGSEDRYYGPFVDAGQVKSTVALVRRVLPLRERARPLYKDKPCLNYDMGICPGPCQGLVSEEDYAETVRLAEMVFRGEGSQLLSTLQGRMESESRAERFERAGEIKEQMALVRGGLLGSSLHFSAGGVAAGSGGDRGGLQPRGDGARASSAEGGGSRRDVVAVGLAGGLACFQVFQVRGGRLIGRLGFTYRVEDEGLSRGEVLQACLERYWGDVLKSAPTVAGGVGDERGDNLPSRTLNGNAGAKGGKGGDFSVLDVPEEIVTADALPEGGAVLLAELLSGARKAAADAQRGAQATGWGEGGSPRDLTTEKTTTGKTARGKRSVDKSYPPAVAVRVVHGESGAGERHHLCVMALKNAELEAKRLLQGGESTAWGLSQLARMLGLASSPARIEGYDVSHTGGGNAVASLVCFLNGKASPNNHRRYRIRSPGIRKGHSDDYASLREVIARRFSPPTPPLRSPPPPSQ---ANPV-PELVLIDGGKGQLAAALEGAAIAADAWLSVERGGTTTLTGSDTEPAVGAAAAVDTGPPGAPPLESRELAGTALVDDAVRRDQASWSTLPSLVGERTAQEEDPDAVLSTAATPPPEPSDGDVAGARSVDVGGGRRATFVSLAKKEEEVYVPGSSEALAAALEAGPSSPGVMLLRQVRDEAHRFAVAYHRKLRGKDMFLPGRDTVSTQETDSVNGGGQQAFESIAGLSSKARHELTITFGSLEGARIAGEAELRRIPGIGPVLAKRI 2394
I++IVT + AEAL LEA+LI+QHQP FNVLLKDDK+ YPY+C+TWSE YPR+ +TR RR G S+DRYYGP+VD G ++ T+++ +R+ PLR+R +PL+KD+PCLNYD+G CPG CQ L+S EDY +TV+ MVF+G ++L+ L +ME + RFE+A ++++Q+ + + V+ RD +A+ AC Q+FQ+R GRL+GRLGF + + + GE+LQ LE ++ V +++P EI+ LP+ A +LAE L+ RG++ VA+ + ++ A L M +NA+ E R+ + + L LA L L P RIEGYD+SH G +AVAS V F++G + ++R Y+I++P +R GHSDD+AS+ EVI RRF R P + NP P+LV+IDGGKGQL+A +E REL L+ D VSLAKK EE+++PG S L E PGV LLR++RDEAHRFA+++HRK R TD + + I GL + EL F S++ R A +L +PGIGP LA++I
Sbjct: 76 IEFIVTDTEAEALALEANLIKQHQPHFNVLLKDDKK-YPYLCITWSEDYPRIFVTRK--RRKGNSKDRYYGPYVDTGLLRRTLSIAKRIFPLRQRPQPLFKDRPCLNYDIGRCPGVCQQLISPEDYHKTVQRVAMVFQGRTTELVDVLARQMEKAAEELRFEQAAQLRDQLQGLERLTAHQKVALPDDTVS----------------------------RDAIALASDDQFACIQLFQIRAGRLVGRLGFN--ADAQAGTPGEILQRVLEEHYSMV--------------------------------------EPIEIPAEILVQYELPD--ADMLAEYLT------------------------------------DRRGRK---------VAIDMPQRQTKA----ELVEMVERNAQYELARMQKVADRNLQALQDLAEALDLPDLPKRIEGYDISHIQGSDAVASQVVFVDGMPAKQHYRHYKIKNPDVRSGHSDDFASMAEVIRRRFR------RYAADPEKLRVGNPDWPDLVMIDGGKGQLSAVVE---------------------------------------------VLREL---NLLQDL----------------------------------------------------------NVVSLAKKREEIFLPGESLPLNTEAE----QPGVQLLRRLRDEAHRFAISFHRKKR----------------TDRMR---RSRLSEIPGLGQHRQKELLAAFRSIDYIREASVEQLAAVPGIGPRLAEQI 618
BLAST of mRNA_Ecto-sp13_S_contig1213.1808.1 vs. uniprot
Match: A0A0M1JMA2_9CYAN (UvrABC system protein C n=1 Tax=Planktothricoides sp. SR001 TaxID=1705388 RepID=A0A0M1JMA2_9CYAN) HSP 1 Score: 323 bits (828), Expect = 2.100e-96 Identity = 253/802 (31.55%), Postives = 367/802 (45.76%), Query Frame = 1
Query: 7 IDYIVTASGAEALLLEASLIRQHQPPFNVLLKDDKQNYPYVCVTWSEPYPRVLITRDKPRRGGGSEDRYYGPFVDAGQVKSTVALVRRVLPLRERARPLYKDKPCLNYDMGICPGPCQGLVSEEDYAETVRLAEMVFRGEGSQLLSTLQGRMESESRAERFERAGEIKEQMALVRGGLLGSSLHFSAGGVAAGSGGDRGGLQPRGDGARASSAEGGGSRRDVVAVGLAGGLACFQVFQVRGGRLIGRLGFTYRV------EDEGLSRGEVLQACLERYWGDVLKSAPTVAGGVGDERGDNLPSRTLNGNAGAKGGKGGDFSVLDVPEEIVTADALPEGGAVLLAELLSGARKAAADAQRGAQATGWGEGGSPRDLTTEKTTTGKTARGKRSVDKSYPPAVAVRVVHGESGAGERHHLCVMALKNAELEAKRLLQGGESTAWGLSQLARMLGLASSPARIEGYDVSHTGGGNAVASLVCFLNGKASPNNHRRYRIRSPGIRKGHSDDYASLREVIARRFSPPTPPLRSPPPPSQANPVPELVLIDGGKGQLAAALEGAAIAADAWLSVERGGTTTLTGSDTEPAVGAAAAVDTGPPGAPPLESRELAGTALVDDAVRRDQASWSTLPSLVGERTAQEEDPDAVLSTAATPPPEPSDGDVAGARSVDVGGGRRATFVSLAKKEEEVYVPGSSEALAAALEAGPSSPGVMLLRQVRDEAHRFAVAYHRKLRGKDMFLPGRDTVSTQETDSVNGGGQQAFESIAGLSSKARHELTITFGSLEGARIAGEAELRRIPGIGPVLAKRI 2394
I++IVT + AEAL LEA+LI+QHQP FNVLLKDDK+ YP++C+TWSEPYPRV ITR R+ +DRYYGP+VD+ Q+++T+ LV+R+ PLR+R +PL+KD+PCLNYD+G CPG CQGL++ EDY +TV+ MVF+G ++LL TL ME + + FE+A I++Q+A ++G + + ++ RD VA+ G C Q+FQ+R G+L+GRLGF R+ + +G+ +G Q+ R +GDVL+ + +E + + +++P EI+ L + LA LS +G++ V++ +S A L M +NA E R+ + + L LA +L LA P RIEGYD+SH G +AVAS V F++G + ++R Y+I++P + GH+DD+AS+ EVI RRF S S +P+LV+IDGGKGQL+A ++ VLS D+G VSLAKK EE+++PG S L+ PGV LLR+VRDEAHRFAV++HR+ R M + + I GL + +L F S++ RIA +L +PGIGPVLA+ I
Sbjct: 82 IEFIVTDTEAEALALEANLIKQHQPYFNVLLKDDKK-YPFLCITWSEPYPRVFITRK--RQKSNPQDRYYGPYVDSQQLRNTLKLVKRIFPLRQRPQPLFKDRPCLNYDIGRCPGVCQGLITPEDYHKTVQKVAMVFQGRTAELLETLTSYMEQAAESLNFEQAAIIRDQIASLKGLGIQQKVALPDDRIS----------------------------RDAVALATDGQNTCIQLFQIRAGQLVGRLGFVVRLSPVEPPQPDGVQKGR--QSDESREFGDVLQR-------ILEEHYQQVDA-------------------VEIPSEILVQYELKDED--FLASWLS------------------------------------DRKGRK---------VSILTPQRQSKA----ELIEMVERNAYHELSRMQKVSDRNMQALQDLAEILDLADLPHRIEGYDISHIQGSDAVASRVVFIDGLPAKQHYRHYQIKNPAVHAGHADDFASMAEVIQRRFRHGKAGKNSAH--SIPEDLPDLVMIDGGKGQLSAVVK--------------------------------------------------------------------------------------VLS--------------------DLGLMADLRVVSLAKKREEIFLPGES----LPLKTDSEQPGVQLLRRVRDEAHRFAVSFHRQKRTNRMR-------------------RSRLDEIPGLGHHRQKQLLAYFRSVDYIRIATPEQLAEVPGIGPVLAQEI 642
BLAST of mRNA_Ecto-sp13_S_contig1213.1808.1 vs. uniprot
Match: K9TG78_9CYAN (UvrABC system protein C n=1 Tax=Oscillatoria acuminata PCC 6304 TaxID=56110 RepID=K9TG78_9CYAN) HSP 1 Score: 320 bits (820), Expect = 1.740e-95 Identity = 246/796 (30.90%), Postives = 357/796 (44.85%), Query Frame = 1
Query: 7 IDYIVTASGAEALLLEASLIRQHQPPFNVLLKDDKQNYPYVCVTWSEPYPRVLITRDKPRRGGGSEDRYYGPFVDAGQVKSTVALVRRVLPLRERARPLYKDKPCLNYDMGICPGPCQGLVSEEDYAETVRLAEMVFRGEGSQLLSTLQGRMESESRAERFERAGEIKEQMALVRGGLLGSSLHFSAGGVAAGSGGDRGGLQPRGDGARASSAEGGGSRRDVVAVGLAGGLACFQVFQVRGGRLIGRLGFTYRVEDEGLSRGEVLQACLERYWGDVLKSAPTVAGGVGDERGDNLPSRTLNGNAGAKGGKGGDFSVLDVPEEIVTADALPEGGAVLLAELLSGARKAAADAQRGAQATGWGEGGSPRDLTTEKTTTGKTARGKRSVDKSYPPAVAVRVVHGESGAGERHHLCVMALKNAELEAKRLLQGGESTAWGLSQLARMLGLASSPARIEGYDVSHTGGGNAVASLVCFLNGKASPNNHRRYRIRSPGIRKGHSDDYASLREVIARRFSPPTPPLRSPPPPSQANPVPELVLIDGGKGQLAAALEGAAIAADAWLSVERGGTTTLTGSDTEPAVGAAAAVDTGPPGAPPLESRELAGTALVDDAVRRDQASWSTLPSLVGERTAQEEDPDAVLSTAATPPPEPSDGDVAGARSVDVGGGRRATFVSLAKKEEEVYVPGSSEALAAALEAGPSSPGVMLLRQVRDEAHRFAVAYHRKLRGKDMFLPGRDTVSTQETDSVNGGGQQAFESIAGLSSKARHELTITFGSLEGARIAGEAELRRIPGIGPVLAKRI 2394
I++IVT + AEAL LEA+L++QHQP FNVLLKDDK+ YPY+C+TWSE YPR+ ITR R+ ++DRYYGP+VDAG ++ST+ LV+++ PLR+R +PL+KD+PCLNYD+G CPG CQGL+ EDY +TV+ MVF+G +LL L+ +ME + FE A +++++ ++ G + DR +D +A+ G AC Q+FQVR G+L+GRLGF E + G +LQ LE ++ +V +++P EI+ LPE A +L + LS +G++ V++ ++ A L M KNA+ E R+ + + A + LA +L L P RIEGYD+SH G +AVAS V F++G + ++RRY+IR+P ++ GHSDD+ASL EV+ RRF R P+LV+IDGGKGQL+A +E RE+ L++D VSLAK+ EE++ PG S + + P PGV LLR++RDEAHRFAV +HR+ R + M + + I GL + + +L F SL+ IA +L + GIGP LA++I
Sbjct: 76 IEFIVTDTEAEALALEANLVKQHQPYFNVLLKDDKK-YPYLCITWSETYPRIFITRK--RKAASAKDRYYGPYVDAGVLRSTLHLVKQIFPLRQRPQPLFKDRPCLNYDIGRCPGVCQGLIDSEDYRKTVQKVAMVFQGRTEELLDILKQQMEVAAEELNFELAARLRDRIQGLQSLHAGQKVSLPD---------DR-------------------LSQDAIALSSNGDRACIQLFQVRAGQLVGRLGFV--AEAQTAEPGAILQRVLEEHYRNV--------------------------------------DSVEIPAEILVQHELPE--AEILGDWLS------------------------------------DRKGRK---------VSILTPQRQTKA----ELIEMVAKNADYEMARMQKFSDRNAAAMQDLAELLDLPELPRRIEGYDISHVQGSDAVASRVVFIDGLPANQHYRRYKIRNPEVQSGHSDDFASLAEVLGRRFRDAGNQKRETGKIEHTPDWPDLVMIDGGKGQLSAVVE---------------------------------------------VLREM---DLLEDV----------------------------------------------------------RVVSLAKQREEIFQPGES----LPVPSDPEQPGVQLLRRLRDEAHRFAVTFHRQQRTERMR-------------------RSRLDEIPGLGFERQKQLLAHFHSLDYISIATPEQLAEVAGIGPRLAQQI 620
BLAST of mRNA_Ecto-sp13_S_contig1213.1808.1 vs. uniprot
Match: A0A6G3Z4X0_9CYAN (UvrABC system protein C n=2 Tax=unclassified Leptolyngbya TaxID=2650499 RepID=A0A6G3Z4X0_9CYAN) HSP 1 Score: 321 bits (822), Expect = 2.130e-95 Identity = 247/797 (30.99%), Postives = 352/797 (44.17%), Query Frame = 1
Query: 7 IDYIVTASGAEALLLEASLIRQHQPPFNVLLKDDKQNYPYVCVTWSEPYPRVLITRDKPRRGGGSEDRYYGPFVDAGQVKSTVALVRRVLPLRERARPLYKDKPCLNYDMGICPGPCQGLVSEEDYAETVRLAEMVFRGEGSQLLSTLQGRMESESRAERFERAGEIKEQMALVRGGLLGSSLHFSAGGVAAGSGGDRGGLQPRGDGARASSAEGGGSRRDVVAVGLAGGLACFQVFQVRGGRLIGRLGFTYRVEDEGLSRGEVLQACLERYWGDVLKSAPTVAGGVGDERGDNLPSRTLNGNAGAKGGKGGDFSVLDVPEEIVTADALPEGGAVLLAELLSGARKAAADAQRGAQATGWGEGGSPRDLTTEKTTTGKTARGKRSVDKSYPPAVAVRVVHGESGAGERHHLCVMALKNAELEAKRLLQGGESTAWGLSQLARMLGLASSPARIEGYDVSHTGGGNAVASLVCFLNGKASPNNHRRYRIRSPGIRKGHSDDYASLREVIARRFSPPTPPLRSPPPPSQANPV-PELVLIDGGKGQLAAALEGAAIAADAWLSVERGGTTTLTGSDTEPAVGAAAAVDTGPPGAPPLESRELAGTALVDDAVRRDQASWSTLPSLVGERTAQEEDPDAVLSTAATPPPEPSDGDVAGARSVDVGGGRRATFVSLAKKEEEVYVPGSSEALAAALEAGPSSPGVMLLRQVRDEAHRFAVAYHRKLRGKDMFLPGRDTVSTQETDSVNGGGQQAFESIAGLSSKARHELTITFGSLEGARIAGEAELRRIPGIGPVLAKRI 2394
I++IVT + AEAL LEA+LI+QHQP FNVLLKDDK+ YPY+C+TWSE YPR+ +TR +R ++RYYGP+VDAG ++ST++LV+R+ PLR+R +PL++D+PCLNYD+G CPG CQ L+S EDY +T++ MVF+G ++L+ L +ME + +FE+A +++Q+ + + V+ RD +A+ AC Q+FQ+R GRL+GRLGF + + + G++LQ LE ++ +++P EI+ LPE +LA+ L T R R V P + L M +NA+ E R + + TA L LA +L L P RIEGYD+SH G +AVAS V F++G + ++R Y+I++P +R GHSDD+AS+ EVI RRF P P NP P++++IDGGKGQL+A + AV RD S L VSLAKK EE+++PG+S L E PGV LLR++RDEAHRFAV++HRK R M + I GL + EL F S++ R A +L ++PGIGP LA++I
Sbjct: 76 IEFIVTDTEAEALALEANLIKQHQPHFNVLLKDDKK-YPYLCITWSEEYPRIFVTR---KRRKNLKNRYYGPYVDAGLLRSTLSLVKRIFPLRQRPQPLFRDRPCLNYDIGRCPGVCQQLISSEDYHKTLQRVAMVFQGRTTELVDILTQQMEKAAEGLKFEQAARLRDQIRGLERLCANQKVALPDDTVS----------------------------RDAIALASDDQFACIQLFQIRAGRLVGRLGFN--ADAQAGTPGQILQRVLEEHYQTA--------------------------------------EPIEIPAEILVQHELPESD--ILAKYL-------------------------------------TERRGRKVTLEMPQRQT------------KAELIDMVERNAQYELVRTQKVADRTALSLQDLAEVLDLPDLPKRIEGYDISHIQGSDAVASQVVFVDGMPAKQHYRHYKIKNPEVRAGHSDDFASMAEVIRRRFRRYA---ADPNKPRVGNPDWPDVIMIDGGKGQLSAVV-----------------------------------------------------------AVLRDMDLLSELH-----------------------------------------------VVSLAKKREEIFLPGASLPLKTETE----QPGVQLLRRLRDEAHRFAVSFHRKKRSDRMR-------------------RSRLSDIPGLGQHRQKELLAAFRSIDYIREAAPDQLAKVPGIGPRLAQQI 617
BLAST of mRNA_Ecto-sp13_S_contig1213.1808.1 vs. uniprot
Match: UVRC_SYNY3 (UvrABC system protein C n=9 Tax=Synechocystis TaxID=1142 RepID=UVRC_SYNY3) HSP 1 Score: 318 bits (816), Expect = 6.650e-95 Identity = 247/796 (31.03%), Postives = 356/796 (44.72%), Query Frame = 1
Query: 7 IDYIVTASGAEALLLEASLIRQHQPPFNVLLKDDKQNYPYVCVTWSEPYPRVLITRDKPRRGGGSEDRYYGPFVDAGQVKSTVALVRRVLPLRERARPLYKDKPCLNYDMGICPGPCQGLVSEEDYAETVRLAEMVFRGEGSQLLSTLQGRMESESRAERFERAGEIKEQMALVRGGLLGSSLHFSAGGVAAGSGGDRGGLQPRGDGARASSAEGGGSRRDVVAVGLAGGLACFQVFQVRGGRLIGRLGFTYRVEDEGLSRGEVLQACLERYWGDVLKSAPTVAGGVGDERGDNLPSRTLNGNAGAKGGKGGDFSVLDVPEEIVTADALPEGGAVLLAELLSGARKAAADAQRGAQATGWGEGGSPRDLTTEKTTTGKTARGKRSVDKSYPPAVAVRVVHGESGAGERHHLCVMALKNAELEAKRLLQGGESTAWGLSQLARMLGLASSPARIEGYDVSHTGGGNAVASLVCFLNGKASPNNHRRYRIRSPGIRKGHSDDYASLREVIARRFSPPTPPLRSPPPPSQANPVPELVLIDGGKGQLAAALEGAAIAADAWLSVERGGTTTLTGSDTEPAVGAAAAVDTGPPGAPPLESRELAGTALVDDAVRRDQASWSTLPSLVGERTAQEEDPDAVLSTAATPPPEPSDGDVAGARSVDVGGGRRATFVSLAKKEEEVYVPGSSEALAAALEAGPSSPGVMLLRQVRDEAHRFAVAYHRKLRGKDMFLPGRDTVSTQETDSVNGGGQQAFESIAGLSSKARHELTITFGSLEGARIAGEAELRRIPGIGPVLAKRI 2394
I++IVT + AEAL LEA+LI+QHQP FNVLLKDDK+ YPYVC+TWSE YPR+ ITR RR ++DRYYGP+VD+ ++ T+ L++R+ PLR+R +PL+K +PCLNYD+G CPG CQ L++ EDY +T++ MVF+G +L L +ME + +FE+A I++Q+ + G L + S P+ RD +AV G ++ Q+FQ+R GRL+GRLGF + L +GEVLQ LE+++ V +++P E++ ALP+G ELL+ W T++ R V + P + L M +NA+ E +RL + L LA +L L + P RIEGYD+SH G NAVAS V F++G + +R Y+I++P I+ GHSDD+ASL EVI RRF ++ P+L++IDGGKGQL+A + + L L+D + T VSLAK+ EE+++PG S+ L E PGV LLR++RDEAHRFAV++HR+ R ++ + + I GL + +L F SL+ R A +L+ +PGIGP LA+ I
Sbjct: 77 IEFIVTDTEAEALALEANLIKQHQPHFNVLLKDDKK-YPYVCITWSETYPRIFITRK--RRLNQAKDRYYGPYVDSFSLRQTLRLIQRIFPLRQRRQPLFKHRPCLNYDIGRCPGVCQELITPEDYRQTLQKVAMVFQGRTQELHQLLTQQMEKAAADLKFEQAALIRDQINSL--GKLNADQKVSL---------------PQDT-----------ISRDAIAVASDGQISAIQLFQIRAGRLVGRLGFFADGVESELEKGEVLQRVLEQHYQQV--------------------------------------EAVEIPSEVILPCALPDG------ELLND----------------W-----------------LTSQRGRKVTFNLPQRQT------------KAELLEMVERNAQYELERLQKQTAKNVTALEDLAEILNLETLPKRIEGYDISHIQGSNAVASQVVFIDGVPAQQYYRHYKIKNPSIKVGHSDDFASLAEVIIRRFQSSVKGKKN------QQDWPDLIMIDGGKGQLSAVV------------------------------------------------KVLKKMDLLD----------------------------------------------------------KFTVVSLAKQREEIFLPGESQPLPTHAE----QPGVQLLRRLRDEAHRFAVSFHRQQR-------------------LSKSRRSRLDEIPGLGFSRQKQLLAHFRSLDYIREASVKQLQEVPGIGPQLAQTI 617
BLAST of mRNA_Ecto-sp13_S_contig1213.1808.1 vs. uniprot
Match: UVRC_ACAM1 (UvrABC system protein C n=4 Tax=Acaryochloris TaxID=155977 RepID=UVRC_ACAM1) HSP 1 Score: 318 bits (814), Expect = 1.300e-94 Identity = 247/797 (30.99%), Postives = 356/797 (44.67%), Query Frame = 1
Query: 7 IDYIVTASGAEALLLEASLIRQHQPPFNVLLKDDKQNYPYVCVTWSEPYPRVLITRDKPRRGGGSEDRYYGPFVDAGQVKSTVALVRRVLPLRERARPLYKDKPCLNYDMGICPGPCQGLVSEEDYAETVRLAEMVFRGEGSQLLSTLQGRMESESRAERFERAGEIKEQMALVRGGLLGSSLHFSAGGVAAGSGGDRGGLQPRGDGARASSAEGGGSRRDVVAVGLAGGLACFQVFQVRGGRLIGRLGFTYRVEDEGLSRGEVLQACLERYWGDVLKSAPTVAGGVGDERGDNLPSRTLNGNAGAKGGKGGDFSVLDVPEEIVTADALPEGGAVLLAELLSGARKAAADAQRGAQATGWGEGGSPRDLTTEKTTTGKTARGKRSVDKSYPPAVAVRVVHGESGAGERHHLCVMALKNAELEAKRLLQGGESTAWGLSQLARMLGLASSPARIEGYDVSHTGGGNAVASLVCFLNGKASPNNHRRYRIRSPGIRKGHSDDYASLREVIARRFSPPTPPLRSPPPPSQA-NPVPELVLIDGGKGQLAAALEGAAIAADAWLSVERGGTTTLTGSDTEPAVGAAAAVDTGPPGAPPLESRELAGTALVDDAVRRDQASWSTLPSLVGERTAQEEDPDAVLSTAATPPPEPSDGDVAGARSVDVGGGRRATFVSLAKKEEEVYVPGSSEALAAALEAGPSSPGVMLLRQVRDEAHRFAVAYHRKLRGKDMFLPGRDTVSTQETDSVNGGGQQAFESIAGLSSKARHELTITFGSLEGARIAGEAELRRIPGIGPVLAKRI 2394
I++IVT + AEAL LEA+LI+QHQP FNVLLKDDK+ YPY+CVTWS+ YPR+ ITR RR G ++D+YYGP+VD Q++ T+ LV+R+ PLR+R +PL+KD+PCLNY++G CPG CQ L++ E Y + ++ M+F+G S+L++TL +ME + FE+A +++Q+ ++G + + V+ RD +A+ +AC Q+FQ+R GRL+GRLGF + L G +LQ LE ++G +++P EI+ LPE LLA LS R +R V + P R + E L M +NA+ E R + + T L LA +L L P RIE YD+SH G +AVAS V F++G + ++RRY+IR+P ++ GHSDD+ASL EV+ RRF SP P Q + P+LV+IDGGKGQL+A LE L +V+D +SLAK+ EE++ PG S+ L P PGV L+R++RDEAHRFA+++HRK R + M + + I GL + EL F S++ R A +L+ +P IGP LA++I
Sbjct: 77 IEFIVTDTEAEALALEANLIKQHQPHFNVLLKDDKK-YPYLCVTWSQTYPRIFITRK--RRLGKAQDKYYGPYVDVWQLRQTLRLVKRLFPLRQRRKPLFKDRPCLNYEIGRCPGVCQALITPEAYRQILQKVVMIFQGRTSELINTLSLQMEQAAEDLNFEQAARLRDQIKGLQGLGVDQKVALPDDTVS----------------------------RDAIALAADDQIACVQLFQIRSGRLVGRLGFMADAQSGSL--GMILQHVLEAHYGSA--------------------------------------EPVELPLEILVQTELPE--TELLASYLS-------------------------------------QRKERKVSITCPQ----RQIKAE--------LIEMVERNAQYELARTQKSRDRTLNALQDLAELLDLPELPHRIECYDISHIQGSDAVASQVVFIDGLPAKQHYRRYKIRNPNVKAGHSDDFASLAEVLHRRFRQYH---LSPEQPRQGTSDWPDLVVIDGGKGQLSAVLE------------------------------------------------SLTKIEVVEDL----------------------------------------------------------QIISLAKQREEIFQPGESQPLP----TDPEQPGVQLIRRLRDEAHRFAISFHRKKRLERMR-------------------RSRLDDIPGLGHHRQKELLAAFRSIDYIREASPEQLKAVPTIGPQLAQKI 619
BLAST of mRNA_Ecto-sp13_S_contig1213.1808.1 vs. uniprot
Match: A0A6H2NR38_9CYAN (UvrABC system protein C n=1 Tax=Leptolyngbya sp. LCM1.Bin17 TaxID=2480211 RepID=A0A6H2NR38_9CYAN) HSP 1 Score: 318 bits (814), Expect = 1.680e-94 Identity = 252/797 (31.62%), Postives = 355/797 (44.54%), Query Frame = 1
Query: 7 IDYIVTASGAEALLLEASLIRQHQPPFNVLLKDDKQNYPYVCVTWSEPYPRVLITRDKPRRGGGSEDRYYGPFVDAGQVKSTVALVRRVLPLRERARPLYKDKPCLNYDMGICPGPCQGLVSEEDYAETVRLAEMVFRGEGSQLLSTLQGRMESESRAERFERAGEIKEQMALVRGGLLGSSLHFSAGGVAAGSGGDRGGLQPRGDGARASSAEGGGSRRDVVAVGLAGGLACFQVFQVRGGRLIGRLGFTYRVEDEGLSRGEVLQACLERYWGDVLKSAPTVAGGVGDERGDNLPSRTLNGNAGAKGGKGGDFSVLDVPEEIVTADALPEGGAVLLAELLSGARKAAADAQRGAQATGWGEGGSPRDLTTEKTTTGKTARGKRSVDKSYPPAVAVRVVHGESGAGERHHLCVMALKNAELEAKRLLQGGESTAWGLSQLARMLGLASSPARIEGYDVSHTGGGNAVASLVCFLNGKASPNNHRRYRIRSPGIRKGHSDDYASLREVIARRFSPPTPPLRSPPPPSQANPV-PELVLIDGGKGQLAAALEGAAIAADAWLSVERGGTTTLTGSDTEPAVGAAAAVDTGPPGAPPLESRELAGTALVDDAVRRDQASWSTLPSLVGERTAQEEDPDAVLSTAATPPPEPSDGDVAGARSVDVGGGRRATFVSLAKKEEEVYVPGSSEALAAALEAGPSSPGVMLLRQVRDEAHRFAVAYHRKLRGKDMFLPGRDTVSTQETDSVNGGGQQAFESIAGLSSKARHELTITFGSLEGARIAGEAELRRIPGIGPVLAKRI 2394
I++IVT + AEAL LEA+LI+Q+QP FNVLLKDDK+ YPY+CVTWSE YPR+ ITR +R +DRYYGP+VD G ++ST++LV+R+ PLR+R +P++KD+PCLNYD+G CPG CQ L+S EDY +T++ MVF+G ++L+ L ME + +FE+A +++Q+ + + V+ RD +A+ AC Q+FQVR GRL+GRLGF + E S G +LQ LE Y+ V +++P I+ +LP+G +LAE LS QR RG++ V+V + ++ A L M +NA+ E R + L LA L L P RIEGYD+SH G +AVAS V F++G + ++R Y+I++P ++ GHSDD+AS+ EVI RRF +P P NP P+LV+IDGGKGQL+A +E V +D L VSLAKK EE+++PG S L PGV LLR++RDEAHRFA+++HRK R TD + + I GL + EL F S++ R A +L ++PGIGP LA++I
Sbjct: 76 IEFIVTDTEAEALALEANLIKQYQPHFNVLLKDDKK-YPYLCVTWSEDYPRIFITR---KRRKSLKDRYYGPYVDVGLLRSTLSLVKRIFPLRQRPQPVHKDRPCLNYDIGRCPGVCQQLISPEDYHKTLQRVVMVFQGRTTELVDILTQHMEKAAAEMKFEQAARLRDQIRGLERLCADQKVALPDDTVS----------------------------RDAIALAADAKHACVQIFQVRAGRLVGRLGFV--ADAESGSPGAILQRVLEDYYQTV--------------------------------------DAVEIPSVILAQHSLPDGD--ILAEYLS---------QR---------------------------RGRK---------VSVEIPQRQTKAD----LIDMVERNAQYELVRTQAVADRNTQALQDLAIALDLPDLPKRIEGYDISHIQGSDAVASQVVFVDGMPAKQHYRHYKIKNPEVKAGHSDDFASMAEVIRRRFRRYA---ANPDQPRVGNPDWPDLVMIDGGKGQLSAVVE-----------------------------------------------------------VLKDLNLLQEL-----------------------------------------------RVVSLAKKREEIFLPGESHPL----NTEADQPGVQLLRRLRDEAHRFAISFHRKKR----------------TDRMR---RSRLSDIPGLGQHRQKELLAAFRSIDYIREASTEQLAQVPGIGPQLARQI 617
BLAST of mRNA_Ecto-sp13_S_contig1213.1808.1 vs. uniprot
Match: K9RSY0_SYNP3 (UvrABC system protein C n=1 Tax=Synechococcus sp. (strain ATCC 27167 / PCC 6312) TaxID=195253 RepID=K9RSY0_SYNP3) HSP 1 Score: 317 bits (811), Expect = 3.940e-94 Identity = 247/798 (30.95%), Postives = 351/798 (43.98%), Query Frame = 1
Query: 7 IDYIVTASGAEALLLEASLIRQHQPPFNVLLKDDKQNYPYVCVTWSEPYPRVLITRDKPRRGGGSEDRYYGPFVDAGQVKSTVALVRRVLPLRERARPLYKDKPCLNYDMGICPGPCQGLVSEEDYAETVRLAEMVFRGEGSQLLSTLQGRMESESRAERFERAGEIKEQMALVRGGLLGSSLHFSAGGVAAGSGGDRGGLQPRGDGARASSAEGGGSRRDVVAVGLAGGLACFQVFQVRGGRLIGRLGFTYRVEDEGLSRGEVLQACLERYWGDVLKSAPTVAGGVGDERGDNLPSRTLNGNAGAKGGKGGDFSVLDVPEEIVTADALPEGGAVLLAELLSGARKAAADAQRGAQATGWGEGGSPRDLTTEKTTTGKTARGKRSVDKSYPPAVAVRVVHGESGAGERHHLCVMALKNAELEAKRLLQGGESTAWGLSQLARMLGLASSPARIEGYDVSHTGGGNAVASLVCFLNGKASPNNHRRYRIRSPGIRKGHSDDYASLREVIARRFSPPTPPLRSPPPPSQANPV--PELVLIDGGKGQLAAALEGAAIAADAWLSVERGGTTTLTGSDTEPAVGAAAAVDTGPPGAPPLESRELAGTALVDDAVRRDQASWSTLPSLVGERTAQEEDPDAVLSTAATPPPEPSDGDVAGARSVDVGGGRRATFVSLAKKEEEVYVPGSSEALAAALEAGPSSPGVMLLRQVRDEAHRFAVAYHRKLRGKDMFLPGRDTVSTQETDSVNGGGQQAFESIAGLSSKARHELTITFGSLEGARIAGEAELRRIPGIGPVLAKRI 2394
I++IVT + AEAL LEA+LI+QHQP FNVLLKDDK+ YPY+C+TWS YPR+ ITR RR +DRYYGP+VD ++ T+ L++R+ PLR+R +PL+KD+PCLNYDMG CPG CQ L++ E+Y +T++ M+F+G +L+ TL +M+ + FE A +++Q+A GL+ G + S ++ SR D +A+ AC Q+FQ+R GRL+GRLGF + + G +LQ LE ++ +++P EI+ ALPE A LA LS A+G++ V + V ++ A L M +NA LE R + + L LA +L L P RIEGYD+SH G +AVAS V F+NG + ++RRY+IR+P ++ GHSDD+ASL E++ RRF P + P+LV+IDGGKGQL+A + L D + D VSLAK+ EE+++PG S+ L P PGV LLR++RDEAHRFAV++HR+ R M + E I GL + +L TF S++ R A A+L +P IGP LA++I
Sbjct: 72 IEFIVTDTEAEALALEANLIKQHQPHFNVLLKDDKK-YPYLCITWSHDYPRIFITRK--RRREAEKDRYYGPYVDTRLLRQTLGLIKRLFPLRQRPQPLFKDRPCLNYDMGRCPGVCQKLITPEEYRKTLQRVAMIFQGRTGELIDTLTTQMDQAAEVLNFELAARLRDQIA---------------------------GLKHLGADQKVSLSDDTVSR-DAIALAADDHQACIQLFQIRSGRLVGRLGFV--ADAQAGQPGLILQRVLEEHYAQA--------------------------------------DPVEIPPEILVQTALPE--AEFLAAYLS------------------------------------QAKGRK---------VTITVPQRQAKA----ELIEMVERNALLELARTQKVSDRNTAALKDLAELLDLPELPQRIEGYDISHIQGSDAVASRVVFINGLPAKQHYRRYKIRNPEVKTGHSDDFASLAEILQRRFRT----YLDDPNKERVGDANWPDLVMIDGGKGQLSAVVN-----------------------------------------------------VLRDGGILED-----------------------------------------------------VKIVSLAKQREEIFLPGESQPLL----TEPDQPGVQLLRRLRDEAHRFAVSFHRQQRSDRMR-------------------RSRLEEIPGLGYHRQKQLLATFRSIDFIRTASLAQLAAVPNIGPRLAQQI 614 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1213.1808.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1213.1808.1 >prot_Ecto-sp13_S_contig1213.1808.1 ID=prot_Ecto-sp13_S_contig1213.1808.1|Name=mRNA_Ecto-sp13_S_contig1213.1808.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=801bp QRIDYIVTASGAEALLLEASLIRQHQPPFNVLLKDDKQNYPYVCVTWSEPback to top mRNA from alignment at Ecto-sp13_S_contig1213:4023..7628+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1213.1808.1 ID=mRNA_Ecto-sp13_S_contig1213.1808.1|Name=mRNA_Ecto-sp13_S_contig1213.1808.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3606bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1213:4023..7628+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1213:4023..7628+ >mRNA_Ecto-sp13_S_contig1213.1808.1 ID=mRNA_Ecto-sp13_S_contig1213.1808.1|Name=mRNA_Ecto-sp13_S_contig1213.1808.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=2403bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1213:4023..7628+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |