mRNA_Ecto-sp13_S_contig12123.1803.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig12123.1803.1 vs. uniprot
Match: D8LGE2_ECTSI (Lipase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGE2_ECTSI) HSP 1 Score: 562 bits (1449), Expect = 4.920e-200 Identity = 271/291 (93.13%), Postives = 280/291 (96.22%), Query Frame = 1
Query: 1 RYGMFNHVVYDVFIKGEDDVKSEETGLRGMSRFGENLTVFSEKGLKFNYVNKKGEKKQEYDFTDDYTIVANLVCSPDSFFSAEDNWFGFIGLSKDKKELVIVFRGTETTKEWIENATVFMEQLDGEPPESGLALFLNRNTLMVHRGFQQLYREKADHFPSPKDKIYEVIEALKNDDEVSIEKVTVVGHSLGAAMAQHCAVDLAHSRVLGDVPILGLSWAGPKGGNAALAAWVAKQPNLRILRVRVPIDFVTNVPPDWMWSITAGGYKHMGTEITLDNTHLHEAGVVKSDGG 873
+YGMFNHVVYDVFIKGEDD KSEETGLRG SRFG++ T FSEKGLKFNYVNKKGEKKQEYDFTDDYTIVANLVCSPDSFFSAEDNWFGFIGLSKDKKE+VIVFRGTETTKEWIENAT+FMEQLDGEPPESGLAL LNR+TLMVH GFQQLYREKAD FPSPKDKIYEVIEA KNDD+VSIEKVTVVGHSLGAAMAQHCAVDLAHSRVLGDVPILGL+WA PKGGNAALAAWVAKQPNLRILRVRVPIDFVTNVPPDWMWSIT GGYKHMGTEITLDNTHLH+AGVVKSD G
Sbjct: 77 KYGMFNHVVYDVFIKGEDDFKSEETGLRGRSRFGDDFTAFSEKGLKFNYVNKKGEKKQEYDFTDDYTIVANLVCSPDSFFSAEDNWFGFIGLSKDKKEMVIVFRGTETTKEWIENATLFMEQLDGEPPESGLALLLNRDTLMVHSGFQQLYREKADQFPSPKDKIYEVIEAFKNDDKVSIEKVTVVGHSLGAAMAQHCAVDLAHSRVLGDVPILGLAWAAPKGGNAALAAWVAKQPNLRILRVRVPIDFVTNVPPDWMWSITTGGYKHMGTEITLDNTHLHKAGVVKSDDG 367
BLAST of mRNA_Ecto-sp13_S_contig12123.1803.1 vs. uniprot
Match: A0A6H5KDS9_9PHAE (Lipase_3 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDS9_9PHAE) HSP 1 Score: 562 bits (1448), Expect = 1.200e-199 Identity = 270/291 (92.78%), Postives = 282/291 (96.91%), Query Frame = 1
Query: 1 RYGMFNHVVYDVFIKGEDDVKSEETGLRGMSRFGENLTVFSEKGLKFNYVNKKGEKKQEYDFTDDYTIVANLVCSPDSFFSAEDNWFGFIGLSKDKKELVIVFRGTETTKEWIENATVFMEQLDGEPPESGLALFLNRNTLMVHRGFQQLYREKADHFPSPKDKIYEVIEALKNDDEVSIEKVTVVGHSLGAAMAQHCAVDLAHSRVLGDVPILGLSWAGPKGGNAALAAWVAKQPNLRILRVRVPIDFVTNVPPDWMWSITAGGYKHMGTEITLDNTHLHEAGVVKSDGG 873
+YGM NHVVYDVFIKGED+VKSEETGLRG SRFG+ LT FSEKGL+FNYVNKKGE+KQEYDFTDDYTIVANLVCSP+SFFSAEDNWFGFIGLSKD+KELVIVFRGTETTKEWIENAT+FMEQLDGEPPESGLAL LNRNTLMVH GFQQLYREKADHFPSPKDKIYEVIEA KND++VSIEKVTVVGHSLGAAMAQHCAVDLAHSRVLGDVPILGL WAGPKGGNAALAAWVAKQPNLRILRVRVPIDFVTNVPPDWMWS+TAGGYKHMGTEITLDNTHLH+AGVVKSD G
Sbjct: 92 KYGMLNHVVYDVFIKGEDEVKSEETGLRGRSRFGDKLTAFSEKGLRFNYVNKKGEQKQEYDFTDDYTIVANLVCSPESFFSAEDNWFGFIGLSKDEKELVIVFRGTETTKEWIENATLFMEQLDGEPPESGLALLLNRNTLMVHSGFQQLYREKADHFPSPKDKIYEVIEAFKNDNKVSIEKVTVVGHSLGAAMAQHCAVDLAHSRVLGDVPILGLGWAGPKGGNAALAAWVAKQPNLRILRVRVPIDFVTNVPPDWMWSMTAGGYKHMGTEITLDNTHLHKAGVVKSDDG 382
BLAST of mRNA_Ecto-sp13_S_contig12123.1803.1 vs. uniprot
Match: D7FQN1_ECTSI (Lipase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQN1_ECTSI) HSP 1 Score: 314 bits (804), Expect = 2.650e-102 Identity = 163/294 (55.44%), Postives = 204/294 (69.39%), Query Frame = 1
Query: 1 RYGMFNHVVYDVFIKGEDDVKSEETGLRGMSRFGENLTVFSEKGLKFNYVNKKGEKKQEYDFTDDYTIVANLVCSPDSFFSAEDNWFGFIGLSKDK---KELVIVFRGTETTKEWIENATVFMEQLDGEPPESGLALFLNRNTLMVHRGFQQLYREKADHFPSPKDKIYEVIEALKNDDEVSIEKVTVVGHSLGAAMAQHCAVDLAHSRVLGDVPILGLSWAGPKGGNAALAAWVAKQPNLRILRVRVPIDFVTNVPPDWMWSITAGGYKHMGTEITLDNTHLHEAGVVKSDGG 873
+YGM NH+VYDVF KG+ VK + TGLR SRFGENL F+ GL+F+YVN GE+KQEYDF+++Y + ANLVCSP +F EDNWFGFI +SK KE+V+VFRGTET KEW NA V M L+G S L L R LM H GFQQLY K HF SP+ I+E I+ K ++ ++KVTVVGHSLGAAM Q CA+DLA+S V GD+PIL L+W PK GN LA WV +QPNLRILR+ V +D V +PPDW+ + +GGYK GTE+ L N + + G+++ D G
Sbjct: 50 KYGMVNHMVYDVFQKGKHGVK-DATGLRARSRFGENLEDFNALGLEFSYVNMAGEQKQEYDFSNEYEVQANLVCSPSAFAVKEDNWFGFIAISKADHGGKEMVVVFRGTETVKEWARNAKVKMVPLEGAKQLSTLELGWARWNLMCHEGFQQLYIGKPKHFESPRTVIHEQIK--KWVEKGRVDKVTVVGHSLGAAMCQLCAIDLAYSNVGGDIPILALAWGAPKVGNKTLATWVTEQPNLRILRISVAVDTVIRLPPDWVGFLLSGGYKATGTELILSNMQMQKQGLLRLDVG 340
BLAST of mRNA_Ecto-sp13_S_contig12123.1803.1 vs. uniprot
Match: D8SCT0_SELML (Phospholipase A1 n=2 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8SCT0_SELML) HSP 1 Score: 97.4 bits (241), Expect = 2.740e-19 Identity = 87/316 (27.53%), Postives = 143/316 (45.25%), Query Frame = 1
Query: 1 RYGMFNHVVYDVFIKGEDDVKSEETGLRGMSRFGENLTVFSEKGLKFNYVNKKGEKKQEYDFTDDYTIVANLVCSPDSFFSAEDNWFGFIGLSKD-------KKELVIVFRGTETTKEWIENA-TVFMEQLDGEPPESGLAL----------FLNRNT--------LMVHRGFQQLYREKADHFP------SPKDKIYEVIEALKNDDEVSIEKVTVVGHSLGAAMAQHCAVDLAHSRVLGD------VPILGLSWAGPKGGNAALAAWVAKQPNLRILRVRVPIDFVTNVPPDWMWSITAGGYKHMGTEITLDNT 834
RY F VVYD K + + G+ R+ ++ +F + +K NY + Y TD T++ +V + F +WFG++ +S D ++++++VFRGT+ EW N F Q+ P+SGL FL+ T +++ + Y K P S +++I + +L N+ + +TV GHSLGA++A CA D+A+ ++ + +P+ +A P GN K LRILRV D V VPP +W GY+H+G E+T+D +
Sbjct: 33 RYAQFIQVVYDSLNK------NPVSKANGLPRYAKS-ELFDKLHVKANYT----IRNFFYCTTDLETLLGKVVETVLDFTDPNTSWFGYVAVSDDEETRRLGRRDIIVVFRGTQQDIEWASNILNSFHGQIGKPEPKSGLPPLQTPTSTPTGFLSGLTNIQLPWEKVLIANRWLAPYTGKNPQEPLGFGKKSAREQISAAVTSLLNEYKAEEMSITVTGHSLGASLATVCAYDIANEKLNVNPSTKKVIPVTCFPFASPYVGNEEFKTAAEKIEGLRILRVTNIWDLVPKVPP-LLW-----GYRHVGIELTIDTS 331
BLAST of mRNA_Ecto-sp13_S_contig12123.1803.1 vs. uniprot
Match: A0A8J5VU22_ZIZPA (Lipase_3 domain-containing protein n=1 Tax=Zizania palustris TaxID=103762 RepID=A0A8J5VU22_ZIZPA) HSP 1 Score: 96.3 bits (238), Expect = 1.250e-18 Identity = 66/212 (31.13%), Postives = 104/212 (49.06%), Query Frame = 1
Query: 223 SPDSFFSAEDNWFGFIGLSKDKKE--------LVIVFRGTETTKEWIENATVFMEQLDGEPPESGLALFLNRNTLMVHRGFQQLYREKADHFPSPKDKIYEVIEALKNDDEVSIEKVTVVGHSLGAAMAQHCAVDLAHSRVLGDVPILGLSWAGPKGGNAALAAWVAKQPNLRILRVRVPIDFVTNVPPDW-MWSITAGGYKHMGTEITLDN 831
S + + + NW G++ + ++E + IV RGT T EW EN + L+GE E G A V RGF LY+ + S + + + + L + + +TVVGHSLG A+A A ++A + V P+ +S+ GPK GNAA + K + +LR+ D VT VP S+T Y+H+G E+++D+
Sbjct: 247 STPEWLTQQSNWIGYVAVCDSEREVARMGRRDIAIVLRGTATCLEWAENLRASLVPLNGESGEDGGA-----QQPKVARGFLSLYKTAGEKVKSLSEDVIDEVRRLMDKYKGEQLSITVVGHSLGGALALLVADEIA-TTVPDAPPVAVVSFGGPKVGNAAFVEKLQKSKKVNVLRIVNAGDMVTKVPGVMPRLSLTKEQYQHVGAELSIDS 452
BLAST of mRNA_Ecto-sp13_S_contig12123.1803.1 vs. uniprot
Match: A2X7W8_ORYSI (Lipase_3 domain-containing protein n=12 Tax=Oryzeae TaxID=147380 RepID=A2X7W8_ORYSI) HSP 1 Score: 94.7 bits (234), Expect = 4.230e-18 Identity = 65/210 (30.95%), Postives = 103/210 (49.05%), Query Frame = 1
Query: 235 FFSAEDNWFGFIGLSKDKKE--------LVIVFRGTETTKEWIENATVFMEQLDGEPPESGLALFLNRNTLMVHRGFQQLYREKADHFPSPKDKIYEVIEALKNDDEVSIEKVTVVGHSLGAAMAQHCAVDLAHSRVLGDVPILGLSWAGPKGGNAALAAWVAKQPNLRILRVRVPIDFVTNVP---PDWMWSITAGGYKHMGTEITLDN 831
+ + + NW G++ + + ++E + IV RGT T EW EN + LDGE E G + V RGF+ LY+ + S +++ + L + +TVVGHSLG A+A A ++A + V P+ +S+ GPK GNAA + K + +LR+ D VT VP P +T Y+H+G E+ +D+
Sbjct: 252 WLTQQSNWIGYVAVCESEREVARMGRRDIAIVLRGTATCLEWAENLRASLVPLDGESGEGG-----GQEEPKVARGFRSLYKTAGEKVKSLSEEVMGEVRRLMEKYKGEELSITVVGHSLGGALALLVADEIA-TTVPDAPPVAVVSFGGPKVGNAAFVDKLQKSGRVNVLRIVNAGDMVTKVPGVAP--RLPLTKEQYQHVGAELRIDS 453
BLAST of mRNA_Ecto-sp13_S_contig12123.1803.1 vs. uniprot
Match: A0A0D9VJ11_9ORYZ (Lipase_3 domain-containing protein n=2 Tax=Leersia perrieri TaxID=77586 RepID=A0A0D9VJ11_9ORYZ) HSP 1 Score: 92.8 bits (229), Expect = 2.440e-17 Identity = 65/210 (30.95%), Postives = 102/210 (48.57%), Query Frame = 1
Query: 235 FFSAEDNWFGFIGLSKDKKE--------LVIVFRGTETTKEWIENATVFMEQLDGEPPESGLALFLNRNTLMVHRGFQQLYREKADHFPSPKDKIYEVIEALKNDDEVSIEKVTVVGHSLGAAMAQHCAVDLAHSRVLGDVPILGLSWAGPKGGNAALAAWVAKQPNLRILRVRVPIDFVTNVP---PDWMWSITAGGYKHMGTEITLDN 831
+ + + NW G++ + + ++E + IV RGT T EW EN + LDGE +G V RGF LY+ + F S +++ + L + +TVVGHSLG A+A A ++A + V P+ +S+ GPK GNAA + K + +LR+ D VT VP P +T Y+H+G E+ +D+
Sbjct: 250 WLTQQSNWIGYVAVCESEREVSRMGRRDIAIVLRGTATCLEWAENLRASLVPLDGET-SAGAGGEAGAEEAKVARGFLSLYKTGGEKFKSLSEEVMGEVRRLMEKYKGEELSITVVGHSLGGALALLVADEIA-TTVPDAPPVAVVSFGGPKVGNAAFVDRLKKSGKVNVLRIVNAGDVVTKVPGVAP--RLPLTKEQYQHVGAELRIDS 455
BLAST of mRNA_Ecto-sp13_S_contig12123.1803.1 vs. uniprot
Match: A0A0E0K330_ORYPU (Lipase_3 domain-containing protein n=3 Tax=Oryza punctata TaxID=4537 RepID=A0A0E0K330_ORYPU) HSP 1 Score: 92.8 bits (229), Expect = 2.450e-17 Identity = 65/210 (30.95%), Postives = 103/210 (49.05%), Query Frame = 1
Query: 235 FFSAEDNWFGFIGLSKDKKE--------LVIVFRGTETTKEWIENATVFMEQLDGEPPESGLALFLNRNTLMVHRGFQQLYREKADHFPSPKDKIYEVIEALKNDDEVSIEKVTVVGHSLGAAMAQHCAVDLAHSRVLGDVPILGLSWAGPKGGNAALAAWVAKQPNLRILRVRVPIDFVTNVP---PDWMWSITAGGYKHMGTEITLDN 831
+ + + NW G++ + + ++E + IV RGT T EW EN + LDGE E G + V RGF+ LY+ + S +++ + L + +TVVGHSLG A+A A ++A + V P+ +S+ GPK GNAA + K + +LR+ D VT VP P +T Y+H+G E+ +D+
Sbjct: 258 WLTQQSNWIGYVAVCESEREVTRMGRRDIAIVLRGTATCLEWAENLRASLVPLDGESGEGGSGGA--QEEPKVARGFRSLYKTAGEKVKSLSEEVMGEVRRLMEKYKGEELSITVVGHSLGGALALLVADEIA-TTVPDAPPVAVVSFGGPKVGNAAFVDKLQKSGKVNVLRIVNAGDMVTKVPGVAP--RLPLTKEQYQHVGAELRIDS 462
BLAST of mRNA_Ecto-sp13_S_contig12123.1803.1 vs. uniprot
Match: A0A6P5EKC8_ANACO (phospholipase A1-Ibeta2, chloroplastic n=2 Tax=Ananas comosus TaxID=4615 RepID=A0A6P5EKC8_ANACO) HSP 1 Score: 91.7 bits (226), Expect = 2.980e-17 Identity = 66/222 (29.73%), Postives = 104/222 (46.85%), Query Frame = 1
Query: 232 SFFSAEDNWFGFIGLSKDKKE--------LVIVFRGTETTKEWIENATVFMEQLDGEPPESGLALFLNRNTLMVHRGFQQLYREKADHFPSPKDKIYEVIEALKNDDEVSIEKVTVVGHSLGAAMAQHCAVDLAHSRVLGDVPILGLSWAGPKGGNAALAAWVAKQPNLRILRVRVPIDFVTNVPPDWMWSITAGGYKHMGTEITLDNTHLHEAGVVKSDGG 873
S+ + +W G++ + +E +V+V RGT T EW EN + +DGE P + + V RGF LY+ + PS D + + L + + VTVVGHSLGAA+A A +L+ P+ +S+ GP+ GN A A + + + +LR+ D VT VP GY+H+GTE+ L H ++ ++ G
Sbjct: 130 SWLTQRTSWIGYVAVCDSDREVARMGRRDIVVVLRGTATCLEWAENLRTSLVPVDGEAPGGSAG---DPSAPKVARGFLNLYKTPGERVPSLSDAVVGEVRRLMDVYKGEELSVTVVGHSLGAALALLVADELSACAPRAP-PVAVVSFGGPRVGNRAFAERLERSRGVGVLRIVNAGDVVTRVPG---LPHARNGYEHVGTELRL---HTSDSPCLRPSAG 341
BLAST of mRNA_Ecto-sp13_S_contig12123.1803.1 vs. uniprot
Match: UPI00125D8A7D (phospholipase A1-II 1-like n=1 Tax=Ipomoea triloba TaxID=35885 RepID=UPI00125D8A7D) HSP 1 Score: 90.5 bits (223), Expect = 7.060e-17 Identity = 96/311 (30.87%), Postives = 143/311 (45.98%), Query Frame = 1
Query: 1 RYGMFNHVVYDVFIKGEDDVKSEETGLRGMSRFGE-NL---TVFSEKGLKFNYV---------NKKGEKKQEYDFTDDYTIVANLVCSPDSFFSAEDNWFGFIGLSKDK-------KELVIVFRGTETTKEWIENATVFMEQLDGEPPESGLALFLNRNTLMVHRGFQQLYREKADHFP----SPKDKIYE----VIEALKNDDEVSIEKVTVVGHSLGAAMAQHCAVDLAHSRVLG-DVPILGLSWAGPKGGNAALAAWVAKQPNLRILRVRVPIDFVTNVPPDWMWSITAG------GYKHMGTEITLD 828
YG VYD FI + S+ TGL SR+ + NL T K F Y NK G + Y ++ A+ V E NW G++ ++ DK +++++V+RGTET EWIE+ + M + A+ N +VH+G+ ++Y P S +D++ E ++E KN+ EVSI TV GHSLGA++A AVDLA + + +V + +A PK GN ++Q NLR LRV D V VP S+ AG YK +G + ++
Sbjct: 36 HYGSMIGAVYDSFIT---EPTSKYTGL---SRYAKKNLLQKTGLDNKANPFKYTVTNYFYTPSNKIGGAQGGYHVQ---SVRADAVLK-------ESNWGGYVAVATDKGKEVLGRRDILVVWRGTETMSEWIEDFKIVMVKP---------AIIFADNGSLVHKGWYEMYTSTNQDSPLNSKSARDQVREEVAKLLEQYKNE-EVSI---TVTGHSLGASLATLNAVDLAANPLNNTEVLVTAFLFASPKVGNEGFKNAFSQQKNLRALRVVNQDDLVPKVP---FMSVEAGTILPLIAYKDVGVQFDIN 314 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12123.1803.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig12123.1803.1 >prot_Ecto-sp13_S_contig12123.1803.1 ID=prot_Ecto-sp13_S_contig12123.1803.1|Name=mRNA_Ecto-sp13_S_contig12123.1803.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=295bp MFNHVVYDVFIKGEDDVKSEETGLRGMSRFGENLTVFSEKGLKFNYVNKKback to top mRNA from alignment at Ecto-sp13_S_contig12123:496..4806+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig12123.1803.1 ID=mRNA_Ecto-sp13_S_contig12123.1803.1|Name=mRNA_Ecto-sp13_S_contig12123.1803.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4311bp|location=Sequence derived from alignment at Ecto-sp13_S_contig12123:496..4806+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig12123:496..4806+ >mRNA_Ecto-sp13_S_contig12123.1803.1 ID=mRNA_Ecto-sp13_S_contig12123.1803.1|Name=mRNA_Ecto-sp13_S_contig12123.1803.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=885bp|location=Sequence derived from alignment at Ecto-sp13_S_contig12123:496..4806+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |