mRNA_Ecto-sp13_S_contig12117.1800.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig12117.1800.1 vs. uniprot
Match: A0A6H5KMI8_9PHAE (C2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMI8_9PHAE) HSP 1 Score: 776 bits (2003), Expect = 4.400e-271 Identity = 404/439 (92.03%), Postives = 416/439 (94.76%), Query Frame = 1
Query: 1 AIERSRRTHFRALAALEGRSSQVSPEAVSLTWTGPSAVRRDFTPAAAA--VSVWSNSASPVATPNINTTTENGRPASLSSKADTPRAGCRSFPSRRKQGGDPLALLPVDPGVVTPADAVAVDETGPMSMKHLRELERTLGMNEPKVLEALDAERVLANEMRVGISETHQVFVEVLAATSLRPTGLQGYSDPYCVCYLKIPDSTGGSKSADDRFRGQRGETYFCEKTLSPKWSGQRFVFKVPPAAVQRKRGHGVRVLVLSRNLVRPNDFLGQADVPLSLLQDEREHVGWFPLNRRSSRLMHLAAGDKITGSVKLRVQWVFSVEALLLSQIRGLELFLATVEARLQRTRLLIERLNKEEAKDRKTQLGMTVRGRKENSKIARLKRHLEKVGFKGIGSDGKDGTGSAHGDHRKTPPLKSPLRGRGAAITTPGGPLVHANSLT 1311
AIERSRRT+FRALAALEGRSSQ+SPEAVSLTWTGPSAVRRDFTPAAAA VSVWSNS SP+ATPN TTTENGRPASLSSKADTPRAG RSFPSRR+QGGDPLALLPVD GVVTPADAVA D+TGPMSMK+LRELER LGMNEPKVLE LDAERVLANEMRVGISETHQVFVEVLAA SLRPTGLQGYSDPYCVCYLK+PDSTGGSKSADDRFRGQ GETYFCEKTL+PKWSGQRF+FKVPPAAVQRKRGHGVRVLVLSRNLVRPNDFLGQADVPLSLLQDEREHVGWFPLNRRSSRLMHLAAGDKITGSVKLRVQWVFS+EALLLS+IR LELFL TVEARLQRTRLLIERLNKEEAKDRKTQLGMTVRGRKENSKIARLKRHLEK+GFKGIGSD KDGTGSAHGDHRKTPP KSPLRG GA I PGG L ANSLT
Sbjct: 299 AIERSRRTYFRALAALEGRSSQLSPEAVSLTWTGPSAVRRDFTPAAAAAAVSVWSNSGSPMATPNNKTTTENGRPASLSSKADTPRAGSRSFPSRRRQGGDPLALLPVDSGVVTPADAVAADDTGPMSMKNLRELERRLGMNEPKVLEVLDAERVLANEMRVGISETHQVFVEVLAAASLRPTGLQGYSDPYCVCYLKVPDSTGGSKSADDRFRGQGGETYFCEKTLNPKWSGQRFIFKVPPAAVQRKRGHGVRVLVLSRNLVRPNDFLGQADVPLSLLQDEREHVGWFPLNRRSSRLMHLAAGDKITGSVKLRVQWVFSLEALLLSRIRDLELFLGTVEARLQRTRLLIERLNKEEAKDRKTQLGMTVRGRKENSKIARLKRHLEKMGFKGIGSDSKDGTGSAHGDHRKTPPFKSPLRGGGATIPMPGGQLACANSLT 737
BLAST of mRNA_Ecto-sp13_S_contig12117.1800.1 vs. uniprot
Match: D7G8Y9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8Y9_ECTSI) HSP 1 Score: 781 bits (2017), Expect = 2.450e-254 Identity = 404/438 (92.24%), Postives = 417/438 (95.21%), Query Frame = 1
Query: 1 AIERSRRTHFRALAALEGRSSQVSPEAVSLTWTGPSAVRRDFTPAAAAVSVWSNSASPVATPNINTTTENGRPASLSSKADTPRAGCRSFPSRRKQGGDPLALLPVDPGVVTPADAVAVDETGPMSMKHLRELERTLGMNEPKVLEALDAERVLANEMRVGISETHQVFVEVLAATSLRPTGLQGYSDPYCVCYLKIPDSTGGSKSADDRFRGQRGETYFCEKTLSPKWSGQRFVFKVPPAAVQRKRGHGVRVLVLSRNLVRPNDFLGQADVPLSLLQDEREHVGWFPLNRRSSRLMHLAAGDKITGSVKLRVQWVFSVEALLLSQIRGLELFLATVEARLQRTRLLIERLNKEEAKDRKTQLGMTVRGRKENSKIARLKRHLEKVGFKGIGSDGKDGTGSAHGDHRKTPPLKSPLRGRGAAITTPGGPLVHANSLTL 1314
AIERSRRTHFRALAALEGRSSQ+SPEAVSLTWTGPSA+RRDFTPAAAAVS WSNSASPVATPN NTTTENGRPASLSSKADTPRAG RS PSRR+QGGDPLAL PV PGVVTPADAVAVDET PMSMK LRELER+LGM+EPKVL+ LDAERVLANEMRVGI+ETHQVFVEVLAATSLRPTGLQGYSDPYCVCYLKIPDSTGGSKSADDRFRGQRGETYFCEKTL+P WSGQRF+FKVPPAAVQRKRGHGVRVLVLSRNLVRPNDFLGQADVPLSLLQDEREHVGWFPLNRRSSRLMHLAAGDKI GSVKLRVQWVFS++ALL +QIRGLELFL TVEARLQR RLLIERL KEEAKDRKTQLGMTVRGRKENSKIARLKRHLEK+GFKGIGSD KDGTGSAHGDHRKTPP KSPLRG GA ITTPGG LV ANSLTL
Sbjct: 5879 AIERSRRTHFRALAALEGRSSQLSPEAVSLTWTGPSALRRDFTPAAAAVSAWSNSASPVATPNNNTTTENGRPASLSSKADTPRAGSRSLPSRRRQGGDPLALSPVGPGVVTPADAVAVDETEPMSMKQLRELERSLGMDEPKVLQVLDAERVLANEMRVGITETHQVFVEVLAATSLRPTGLQGYSDPYCVCYLKIPDSTGGSKSADDRFRGQRGETYFCEKTLNPTWSGQRFIFKVPPAAVQRKRGHGVRVLVLSRNLVRPNDFLGQADVPLSLLQDEREHVGWFPLNRRSSRLMHLAAGDKIAGSVKLRVQWVFSLDALLHTQIRGLELFLGTVEARLQRIRLLIERLKKEEAKDRKTQLGMTVRGRKENSKIARLKRHLEKMGFKGIGSDSKDGTGSAHGDHRKTPPFKSPLRGGGATITTPGGQLVRANSLTL 6316
BLAST of mRNA_Ecto-sp13_S_contig12117.1800.1 vs. uniprot
Match: A0A836CLN4_9STRA (C2 domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLN4_9STRA) HSP 1 Score: 177 bits (450), Expect = 9.760e-51 Identity = 92/159 (57.86%), Postives = 114/159 (71.70%), Query Frame = 1
Query: 499 QVFVEVLAATSLRPTGLQGYSDPYCVCYLKIPDSTGGSKSADDRFRGQRGETYFCEKTLSPKWSGQRFVFKVPPAAVQRKRGHGVRVLVLSRNLVRPNDFLGQADVPLSLLQDEREHVGWFPLNRRSSRLMHLAAGDKI--TGSVKLRVQWVFSVEALL 969
QV VEVLAA LR T LQGY++PYC+ YLK + + R + RG TYFCEKT+ PKW QR VF VP AA + +RG+ +RV++LSR+ +RPND LGQA VPL LL D+REHVGWFPLN+R+SRLM L+ DK GSV+LR+QWV + ALL
Sbjct: 1 QVLVEVLAARGLRGTDLQGYANPYCIIYLK-------ATARRRRRQRPRGATYFCEKTVCPKWVDQRLVFTVPAAAARSQRGYSLRVMILSRDFLRPNDLLGQAAVPLDLLLDQREHVGWFPLNQRASRLMALSQMDKPGGCGSVQLRLQWVHTKTALL 152
BLAST of mRNA_Ecto-sp13_S_contig12117.1800.1 vs. uniprot
Match: A0A7S4MN01_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MN01_9STRA) HSP 1 Score: 122 bits (305), Expect = 6.910e-26 Identity = 70/166 (42.17%), Postives = 97/166 (58.43%), Query Frame = 1
Query: 484 ISETHQVFVEVLAATSLRPTGLQGYSDPYCVCYLKIPDSTGGSKSADDRFRGQRGETYFCEKTLSPKWSGQR--FVFKVPPAAVQRKRGHGVRVLVLSRNLVRPNDFLGQADVPLSLLQDEREHVGWFPLNRRSSRLMHL--AAGDKITGSVKLRVQWVFSVEALL 969
IS HQV VEV+ A L+ + G S+PY LK + G + +R TY+ E+TLSPKWS Q FVF VPP A + RGH ++V + S ++ + LG +V L L+++RE VGW+PL RSS L + ++ GSV+LRVQW++SV ALL
Sbjct: 1810 ISSCHQVLVEVIEAAELKAGNVNGLSNPYAEVSLKSRSNRKGKNLFAKKELNRR--TYYIEQTLSPKWSHQPQIFVFNVPPEAAEMTRGHTIKVKLRSFGVLGSHTHLGTTEVHLRSLKNQRELVGWYPLMSRSSGRSELTQSLSSRVRGSVRLRVQWIYSVPALL 1973
BLAST of mRNA_Ecto-sp13_S_contig12117.1800.1 vs. uniprot
Match: A0A7S2UEQ3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UEQ3_9STRA) HSP 1 Score: 119 bits (298), Expect = 4.150e-25 Identity = 67/164 (40.85%), Postives = 97/164 (59.15%), Query Frame = 1
Query: 481 GISETHQVFVEVLAATSLRPTGLQGYSDPYCVCYLKIPDSTGGSKSADDRFRGQRGETYFCEKTLSPKWSGQRFVFKVPPAAVQRKRGHGVRVLVLSRNLVRPNDFLGQADVPLSLLQDEREHVGWFPLNRRSSRL-MHLAAGDKITGSVKLRVQWVFSVEALL 969
IS+ +QV +EVL L+ L G S+PYC LK G ++ + + + +TY+ EKTLSPKW Q FVF+VP A RGH ++V + + L+ LGQA+V L L+++RE V W+PL R+ + ++ + GSVKLRVQW++SV ALL
Sbjct: 113 SISQCNQVVIEVLECAGLKAVYLNGLSNPYCEVILKTRSQ--GKRNLFSK-KAIKRKTYYVEKTLSPKWINQTFVFEVPSEAANVTRGHSIQVQLRNFGLLGKRAHLGQAEVHLRSLRNQRELVCWYPLRGRTGHQELQKSSAEGGRGSVKLRVQWIYSVPALL 273
BLAST of mRNA_Ecto-sp13_S_contig12117.1800.1 vs. uniprot
Match: A0A7S1VMR9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VMR9_9STRA) HSP 1 Score: 112 bits (279), Expect = 8.630e-23 Identity = 62/162 (38.27%), Postives = 93/162 (57.41%), Query Frame = 1
Query: 484 ISETHQVFVEVLAATSLRPTGLQGYSDPYCVCYLKIPDSTGGSKSADDRFRGQRGETYFCEKTLSPKWSGQRFVFKVPPAAVQRKRGHGVRVLVLSRNLVRPNDFLGQADVPLSLLQDEREHVGWFPL-NRRSSRLMHLAAGDKITGSVKLRVQWVFSVEAL 966
IS HQV ++++ A L+ + G +PYC LK P T + R R +TY+ EK+++PKWS Q F+F VP A RGH +R+ + + LV + +LGQ +V L L+ ++E VGW+PL R R + + + GSV+LRVQWV++V L
Sbjct: 201 ISSRHQVVIQIIEAAGLKTNDVTGKCNPYCEVTLKGP--TKAKRGLLSR-RSNTRKTYYIEKSMAPKWSNQYFIFDVPLNAPIVTRGHSLRISLRNFRLVGGHSYLGQTNVHLRNLRSQKEMVGWYPLVGRTGRRELEDSQANWGRGSVRLRVQWVYTVSGL 359
BLAST of mRNA_Ecto-sp13_S_contig12117.1800.1 vs. uniprot
Match: B8CBY6_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CBY6_THAPS) HSP 1 Score: 110 bits (274), Expect = 6.490e-22 Identity = 69/166 (41.57%), Postives = 89/166 (53.61%), Query Frame = 1
Query: 484 ISETHQVFVEVLAATSLRPTGLQGYSDPYCVCYLKIPDSTGGSKSADDRFRGQRGETYFCEKTLSPKWSGQRFVFKVPPAAV---QRKRGHGVRVLVLSRNLVRPNDFLGQADVPLSLLQDEREHVGWFPL-NRRSSRLMHLAAGDKITGSVKLRVQWVFSVEALL 969
I++T+QV V+VL AT L + L G SDPYC LK T KS + R TYF EKTLSP+WS Q FVF VP A + R ++ + S + FLGQ V L L+D++E V W+PL + R + D+ GS+KLRVQWV LL
Sbjct: 4149 ITKTNQVIVQVLEATGLLSSDLNGLSDPYCQVSLK--KHTSSFKSKETR------STYFVEKTLSPQWSQQSFVFDVPAKAAHDPKETRHFSLQCAIKSIQRFSKDKFLGQTHVQLRNLKDQKESVSWYPLMGKLGQREISKDLADRSRGSLKLRVQWVHDYTGLL 4306 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12117.1800.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig12117.1800.1 >prot_Ecto-sp13_S_contig12117.1800.1 ID=prot_Ecto-sp13_S_contig12117.1800.1|Name=mRNA_Ecto-sp13_S_contig12117.1800.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=438bp AIERSRRTHFRALAALEGRSSQVSPEAVSLTWTGPSAVRRDFTPAAAAVSback to top mRNA from alignment at Ecto-sp13_S_contig12117:935..5174- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig12117.1800.1 ID=mRNA_Ecto-sp13_S_contig12117.1800.1|Name=mRNA_Ecto-sp13_S_contig12117.1800.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4240bp|location=Sequence derived from alignment at Ecto-sp13_S_contig12117:935..5174- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig12117:935..5174- >mRNA_Ecto-sp13_S_contig12117.1800.1 ID=mRNA_Ecto-sp13_S_contig12117.1800.1|Name=mRNA_Ecto-sp13_S_contig12117.1800.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1314bp|location=Sequence derived from alignment at Ecto-sp13_S_contig12117:935..5174- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |