mRNA_Ecto-sp13_S_contig1211.1796.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1211.1796.1 vs. uniprot
Match: D7FR84_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FR84_ECTSI) HSP 1 Score: 1106 bits (2860), Expect = 0.000e+0 Identity = 632/746 (84.72%), Postives = 655/746 (87.80%), Query Frame = 3
Query: 159 MELQVSFRGKPLTVPGVDHATAVKHLKNKLEELTAVPVANQKLILKGKALRDEAGTLETAGVLVPSPAQTATTKTATERHEEKGDTFVQKSKLMLVGSKPSEVEEVLREQDRVRVRNDLNGEIIPKGYKKVALNHPPGPSDLSPYRFERIETLPGLPEEETARKILESLAADPGVRAVLEKHRWTVGALCELYPEGKVGVSDTCVMGLNQNHGMKILLRLRTDDLQGFRKILSIRKVLFHELAHNEFSDHDDNFYMLMRQVEREAAELNWTQQSGGRTLAGRPPAPRAEPAGLPGGGGGFVLVKEAFEGGSGRLGGDSNAFTKMFSAREMAGQAAVQRLTPEEQEVEDCCGHTKGNKHATAAXXXXXXXXXXXXXXXXXXXXXXXXXXRSSVAEGPRDCSSALSGGEAGWAAEVEKEERLAETNAMASLVSEMSVTSDDLDDGVAPSLTSAAAGATSGDRGESTDVKTRRDEKRQAERGQGLTGASAMDVTEEEGDGISLEPAGSPSLEAAAPTXXXXXXXXXXXXXXXXXXXXXXXXXXXTPAAAATNLAPAPWAPDSSSLDELLAMGFPREAAVEALSAAGGSIPDAAYRLLTPGMMESGQNNISEAVGITAAGGGAQGSREAGGDTGSDGGVRLPRDVRLQRAVDRVAGHSDRARAVQCLDVLAAVFRNIMEHPEEVKFRKVRRSNGKFKASVGAVAGGVDLLLAAGFEERGDDQLELGRQDPGLIWLAKSTVEAWQERLRQV 2396
MELQVSFRG+PLTV GVDHATAV++LKNKLEELTAVPVANQKLILKGKALRDEAGTLE AGVLVPSPAQTATT TATERHEEKGDTFVQKSKLMLVGSKPSEVEEVLREQDRVRVRNDLNG++ PKGYKKVALN+PPGPSDLSPYRFERIETLPGLPEEETARKILESLAADPGVRAVLEKHRWTVGALCELYPEGKVGVSD CV+GLNQNHGMKI LRLRTDDL+GFRKILSIRKVLFHELAHN+ SDHDDNFYMLMRQVEREAAELNW QQSGGRT+AGRPPAPRAEPAGLPGGG GF+LVKEAFEGGSGRLGGDSNAFTK+FSA EMAGQAAVQRLTPEEQEVEDCCGHTKG VA G AAEVEKEERLAETNAMAS VSEMSVTSDDLDDGVAP+LTSAAAGATSGD G TD KTR E+RQAERGQ LTGAS M+V EEEGDGIS+EP SP LEAAAPT XXXXXXXXXXXXXXXXXXXXXXX T AAAAT L PAP P+SSSLDELLAMGFPREAAVEALSA+GGSIPDAAYRLLTPGMMESG+NN SEAVG+TAAGGGAQGSREAG DTGS+G VRLPRDVRLQ+A DRVAGH+DRARAVQCLDVLAAV RNIMEHPEE KFRKVRRSNGKFKASVGAVAGGVDLLLAAGFEERGDDQLELGRQDPGLIWLAKSTVEAWQERL QV
Sbjct: 1 MELQVSFRGEPLTVTGVDHATAVENLKNKLEELTAVPVANQKLILKGKALRDEAGTLEAAGVLVPSPAQTATTTTATERHEEKGDTFVQKSKLMLVGSKPSEVEEVLREQDRVRVRNDLNGQVTPKGYKKVALNYPPGPSDLSPYRFERIETLPGLPEEETARKILESLAADPGVRAVLEKHRWTVGALCELYPEGKVGVSDKCVLGLNQNHGMKIFLRLRTDDLRGFRKILSIRKVLFHELAHNDISDHDDNFYMLMRQVEREAAELNWMQQSGGRTVAGRPPAPRAEPAGLPGGGEGFILVKEAFEGGSGRLGGDSNAFTKIFSAGEMAGQAAVQRLTPEEQEVEDCCGHTKG------------------------------------VAAG---------------AAEVEKEERLAETNAMASSVSEMSVTSDDLDDGVAPALTSAAAGATSGDHG-GTDGKTRGGEERQAERGQRLTGASEMNVAEEEGDGISVEPVDSPPLEAAAPTPLEXXXXXXXXXXXXXXXXXXXXXXXETLAAAATKLGPAPRTPESSSLDELLAMGFPREAAVEALSASGGSIPDAAYRLLTPGMMESGRNNSSEAVGMTAAGGGAQGSREAGRDTGSEGAVRLPRDVRLQQAADRVAGHADRARAVQCLDVLAAVLRNIMEHPEEAKFRKVRRSNGKFKASVGAVAGGVDLLLAAGFEERGDDQLELGRQDPGLIWLAKSTVEAWQERLCQV 694
BLAST of mRNA_Ecto-sp13_S_contig1211.1796.1 vs. uniprot
Match: A0A836CEA9_9STRA (WLM domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEA9_9STRA) HSP 1 Score: 291 bits (745), Expect = 1.120e-81 Identity = 191/420 (45.48%), Postives = 241/420 (57.38%), Query Frame = 3
Query: 150 RKAMELQVSFRGKPLTVPGVDHATAVKHLKNKLEELTAVPVANQKLILKGKALRDEAGTLETAGVLVPSPAQTATTKTATERHEEKGDTFVQKSKLMLVGSKPSEVEEVLREQDRVRVRNDLNGE-IIPKGYKKVALN-HPPGPSDLSPYRFERIETLPGLPEEETARKILESLAADPG---------------------------VRAVLEKHRWTVGALCELYPEG----------------KVGVSDTCVMGLNQNHGMKILLRLRTDDLQGFRKILSIRKVLFHELAHNEFSDHDDNFYMLMRQVEREAAELNWTQQSGGRTLAGRPPAPRAEPAGLPGG-----GGGFVLVKEAFEGGSGRLGGDSNAFTKMFSAREMAGQA-----AVQRLTPEEQEVEDCCGHTKGNKHATAA 1244
R ++L V+++G +++ V V+ LK LE+ TAVPV NQKL+ KGK L++ +LE GVLVP A KLML+GS ++V V + VRVR+DL GE ++PKGY KV L P D SPY FER++ L GLP + A+ ILE LAAD G VRAV+ KH+WTVG L ELYPEG KVGVS+TC+MGLN+N G I LR+RTDDLQGFRK LS+ KVL+HELAHN + DHD++FYMLMRQ+EREA EL++ Q S GRT++G RAE GG+VLV+EAF GG+ RLGGDS ++ +AREMA QA A+ RLTPEE+EVE CG H+ A
Sbjct: 11 RGLVQLDVAWKGSTISLQ-VQPDWTVQLLKEHLEQRTAVPVLNQKLVWKGKTLKEPYDSLEETGVLVPGRA-----------------------KLMLIGSTAADVVAVSQPAPHVRVRDDLTGEEVVPKGYVKVPLGVGGTDPRDRSPYVFERVQALRGLPRQAEAQAILEELAADRGTCYNAXXXXXXXXXXXXXXXXXXXXXXVRAVMAKHKWTVGLLTELYPEGXXXXXXXXXXXXXXXXKVGVSETCLMGLNENRGQTIRLRVRTDDLQGFRKPLSMLKVLYHELAHNVYGDHDNDFYMLMRQIEREANELDFAQ-SAGRTVSGARSVHRAEXXXXXXXXXXXXSGGYVLVREAFAGGAQRLGGDSAGLARVLTAREMAAQARITSAALLRLTPEEEEVEHACGCHNAKPHSQTA 405
BLAST of mRNA_Ecto-sp13_S_contig1211.1796.1 vs. uniprot
Match: A0A7R9VR13_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VR13_9STRA) HSP 1 Score: 231 bits (589), Expect = 5.630e-64 Identity = 119/207 (57.49%), Postives = 149/207 (71.98%), Query Frame = 3
Query: 591 YRFERIETLPGLPEEETARKILESLAADPGVRAVLEKHRWTVGALCELYPEGKVGVSDTCVMGLNQNHGMKILLRLRTDDLQGFRKILSIRKVLFHELAHNEFSDHDDNFYMLMRQVEREAAELNWTQQSGGRTLAGRPPAPRAEPAGLPGGGGGFVLVKEAFEGGSGRLGGDSNAFTKMFSAREMAGQAAVQRLTPEEQEVEDCCG 1211
Y F IETLP LP+E+ A++IL SLA DPG+ A + KHRW VG L E++PEGKVG + CVMGLNQN G KILLRLRTDDL+GFRKILSIRKVLFHELAHN SDHD +F++LMRQ+E+E E++WTQ SG T+ G E +G+ G FEGG+ RLGGDS+ + AR++A +AA+ RLT EE+E++ CCG
Sbjct: 152 YSFGHIETLPNLPDEKKAKEILTSLANDPGILACMAKHRWNVGCLAEMFPEGKVGQDEVCVMGLNQNKGQKILLRLRTDDLKGFRKILSIRKVLFHELAHNVHSDHDGDFFLLMRQIEKECNEMDWTQGSGS-TIGG---VVSHEGSGV-----GMAGHSTKFEGGTHRLGGDSDFLSHSLPARDLAARAAIMRLTAEEEEIQQCCG 349
BLAST of mRNA_Ecto-sp13_S_contig1211.1796.1 vs. uniprot
Match: W7TIG9_9STRA (Ubiquitin-associated/translation elongation factor EF1B n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TIG9_9STRA) HSP 1 Score: 236 bits (601), Expect = 9.390e-63 Identity = 240/758 (31.66%), Postives = 339/758 (44.72%), Query Frame = 3
Query: 156 AMELQVSFRGKP--LTVPGVDHATAVKHLKNKLEELTAVPVANQKLILKGKALRDEAGTLETAGVLVPSPAQTATTKTATERHEEKGDTFVQKSKLMLVGSKPSEVEEVLREQDR---VRVRNDLNGEIIPKGYKKVALNHPPGPSDLSP--YRFERIETLPGLPEEETARKILESLAADPGVRAVLEKHRWTVGALCELYPEGKVGVSDTCVMGLNQNHGMKILLRLRTDDLQGFRKILSIRKVLFHELAHNEFSDHDDNFYMLMRQVEREAAELNWTQQSGGRTLAGRPPAPRAEPAGLPGGGGGFVLVKEAFEGGSGRLGGDSNAFTKMFSAREMAGQAAVQRLTPEEQEVEDCCGHTKGNKHATAAXXXXXXXXXXXXXXXXXXXXXXXXXXRSSVAEGP-RDCSSALSGGEAGWAAEVEKEERLAETNAMASLVSEMSVTSDDLDDGVAPSLTSAAAGATSGDRG-ESTDVKTRRDEKRQAERGQGLTGASAMDVTEEEGDGISLEPAGSPSL-----EAAAPTXXXXXXXXXXXXXXXXXXXXXXXXXXXTPAAAATNLAPAPWAPDSSSLDELLAMGFPREAAVEALSAAGGSIPDAA-YRLLTPGMMESGQNNISEAVGITAAGGGAQGSREAGGDTGSDGGVRLPRDVRLQRAVDRVAGHSDRARAVQCLDVLAAVFRNIMEHPEEVKFRKVRRSNGKFKASVGAVAGGVDLLLAAGFEER-GDDQLELGRQDPGLIWLAKSTVEAWQE 2381
++E+ +SF+G+ L +P +T + ++ E T + A+QK+I KGK L D + TL G L + D V+ KL+L+G+ + + + R +R+ NDL G + G K++ P L P Y F+ IE LP LP+++ AR+IL LA+DPGV V+E+++W+VGALCE+YPEG VGVS CVMGLN+N G +I LRLRTDDL G+RK LS+RKVLFHELAHN + HD F++LMR +ER+ N S GR + G P AE G+PGG FEGGSGRLGG + SAR MAG AA+QRL+ EEQ ++D CG G + T ++ P R + L E AA E++ + + LV+ V P+ + +G T+ G + T K G G S++D E AG S EAAA +L+ +GF +EAL G + AA Y L E + VG ++A R + R R+ A R+A + L ++ + ++EHP+E+KFR+VR +N KF+ +VG +DLL GF+ER G LE R DPGL+W K VE +E
Sbjct: 12 SVEVNLSFKGQQDLLHLPA---STTLADVQALAETKTGIHPAHQKIICKGKKLTDPSITL---GQL-------------------RAD--VEVIKLVLIGTTTASLAALAEAPARLNNIRIINDLGGNM--SGGIKISTVAAPV---LRPRKYGFQSIEVLPHLPDQDMARRILTDLASDPGVLLVMERYKWSVGALCEMYPEGLVGVSSVCVMGLNENKGQRIFLRLRTDDLLGWRKALSVRKVLFHELAHNVHAAHDQPFHLLMRNIERDVNAFN----SSGRAVGGALHLP-AEGGGMPGG---------LFEGGSGRLGGRGAS----TSARVMAGLAAIQRLSKEEQAIDDACG--SGRQSGTMGLTGVTRPSERD-------------------SDNPNRSIKATLQAQED--AAHTEEKGEKDSKSPDSELVT------------VLPAEDPSRSGRTASGPGYDQLPSPTPSPLKPSVPENPGSLGDSSLDEMRESALHFHSHSAGCCSSTDRMDEAAA---------------------------------------------------QLMGLGFGEAQVLEALHLYDGDLMRAADYLLELAAREERAGEGEGQIVGASSANLSDPSPRPPAAAIDTPTIPSDSRQARVMEAAQRLAREASEGSNA-AFATLQSMLQALLEHPQELKFRRVRLNNAKFQRTVGRFPAAIDLLRDVGFQEREGGTVLEYTRGDPGLLWWGKCVVEQAKE 632
BLAST of mRNA_Ecto-sp13_S_contig1211.1796.1 vs. uniprot
Match: A0A7S3LEW3_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LEW3_9STRA) HSP 1 Score: 220 bits (561), Expect = 3.590e-60 Identity = 146/361 (40.44%), Postives = 206/361 (57.06%), Query Frame = 3
Query: 162 ELQVSFRGKPLTVPGVDHATAVKHLKNKLEELTAVPVANQ-----KLILKGKALRDEAG----TLETAGVLVPSPAQTATTKTATERHEEKGDTFVQKSKLMLVGSKPSEVEEVLREQDRVRVRNDLNGEIIPKGYKKVALNHPPGPSDLSPYRFERIETLPGLPEEETARKILESLAADPGVRAVLEKHRWTVGALCELYPEGKVGVSDTCVMGLNQNHGMKILLRLRTDDLQGFRKILSIRKVLFHELAHNEFSDHDDNFYMLMRQVEREAAELNWTQQSGGRTLAGRPPAPRAEPAGLPGGGGGFVLVKEAFEGGSGRLGGDSN--AFTKMFSAREMAGQAAVQRLTPEEQEVEDCCG 1211
+L +S+RG + +P ++ T V LK ++ + T V N KL+L+GK L+ +A TL T P ++R + + ++ + ++ +E +R R L +++ K Y + + G S Y F IETLP LP E A++ILE+LA DPG++A + KH W VGAL ELYPEGKVG S+ CVMGLNQN GM+ILLR+RTDDL+GFRK+LSIRKVLFHELAHN S+H+ F+ LMRQ+E E L+WT+ +G ++ E G +EGG+ RLGGD N A T S RE+A QAA++R+T EE+E+++ CG
Sbjct: 11 KLLISYRGSKIELP-LEPPTTVLALKQRVVQQTDRHVNNLSTDDIKLMLQGKVLKQDAEDLYETLITRRKKKPQKVYQILATGLSQREAVQAEHDLRDGLQAAPRIRDDHTDKGRKEMER---RKRLGRQMMTKIYTRKG--NVAGSSGYGDYGFGTIETLPNLPHREKAQRILETLANDPGIQACMAKHNWKVGALAELYPEGKVGESEVCVMGLNQNKGMRILLRVRTDDLRGFRKMLSIRKVLFHELAHNVHSEHNGKFFQLMRQIEAECNSLDWTKGAGLTDMSN-------EDGGT-------------YEGGTFRLGGDKNQAAPTNNLSTRELAAQAALRRMTLEEEEIQNNCG 345
BLAST of mRNA_Ecto-sp13_S_contig1211.1796.1 vs. uniprot
Match: A0A7S1G5Y2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G5Y2_9STRA) HSP 1 Score: 212 bits (540), Expect = 3.110e-58 Identity = 122/219 (55.71%), Postives = 144/219 (65.75%), Query Frame = 3
Query: 585 SPYRFERIETLPGLPEEETARKILESLAADPGVRAVLEKHRWTVGALCELYPEGKVGVSDTCVMGLNQNHGMKILLRLRTDDLQGFRKILSIRKVLFHELAHNEFSDHDDNFYMLMRQVEREAAELNWTQQSGGRTLAGRPPAPRAEPAGLPGGGGGFVLVKEAFEGGSGRLGGDSNAFTKMFSAREMAGQAAVQRLTPEEQEVEDCCGHTKGNKHATA 1241
SP RF I+ LPGLP EE AR +L +LA DPGV AV+ KH W V L ELYP GKVGVS+TC+MGLN+N G +ILLR+RTDDLQGFR + I++VL+HELAHN +HD +F+ L R +ERE AEL+WTQQ GGR L G LP GG G F GG+GRLGGD+ MFSARE+A AAV RL+ EQEV C T A A
Sbjct: 43 SPMRFGEIKPLPGLPMEEEARALLTALAEDPGVVAVMTKHGWHVPVLSELYPRGKVGVSETCLMGLNRNAGQEILLRIRTDDLQGFRPMRKIKEVLWHELAHNVHGEHDKDFFALNRVLEREGAELDWTQQ-GGRRLGGAQMF-------LPAGGVGAAHDDAPFAGGTGRLGGDAEV-ASMFSARELAASAAVLRLSEAEQEVTSLCVTTPSAADADA 252
BLAST of mRNA_Ecto-sp13_S_contig1211.1796.1 vs. uniprot
Match: A0A7S4RIJ1_9STRA (Hypothetical protein n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4RIJ1_9STRA) HSP 1 Score: 215 bits (547), Expect = 1.080e-57 Identity = 156/391 (39.90%), Postives = 214/391 (54.73%), Query Frame = 3
Query: 165 LQVSFRGKPLTVPGVDHATAVKHLKNKL-----EELTAVPVANQKLILKGKALRDEAGTLETAG----------VLVPSPAQTATTKTATERHEEKGDTFVQKSKLMLVGSKPSEVEEVLREQDR------VRVRNDLN--GEIIPKGYKKV----------ALNHPPGPSDLSPYRFERIETLPGLPEEETARKILESLAADPGVRAVLEKHRWTVGALCELYPEGKVGVSDTCVMGLNQNHGMKILLRLRTDDLQGFRKILSIRKVLFHELAHNEFSDHDDNFYMLMRQVEREAAELNWTQQSGGRTLAGRPPAPRAEPAGLPGGGGGFVLVKEAFEGGSGRLGGDSNAFTKM--FSAREMAGQAAVQRLTPEEQEVEDCCGHTKGNKH 1232
L +SFRG+ + + +D T + +K+ L + L +P + K++ KGK L G +L S + TTKT + K T + +L+ G SEVE R+ ++ +VR+D+ G+I K++ A G + F +IETLP LP E+ AR ILE+LA D GV A + KHRW VG L ELYPEGKVG +D CVMGLNQN G KILLR+RTDDL+GFRK+LSIRKVLFHELAHN S+HD+ F+ LMRQ+ERE +L+WT+ G +G + A+ L G ++GG+ RLGGDSN RE+A +AA+ RLT EE+E++ CG G ++
Sbjct: 17 LIISFRGEKVEI-SLDLDTTIGDVKSFLLSSVDDSLCMMP-GDVKILHKGKVLMTPEGIANECRNEDDVNMRELLLHFSQKKAKTTKTTS-----KATTLPKIIRLIATGVSSSEVEASDRDMEKGISMASKQVRDDITEMGKIKEARRKRLGRDMLRKAATAQGGRGGGGGETSSGFGKIETLPNLPNEKKARDILETLANDRGVLACMAKHRWNVGCLAELYPEGKVGETDVCVMGLNQNKGQKILLRIRTDDLKGFRKMLSIRKVLFHELAHNVHSEHDEQFFQLMRQIERECNDLDWTRSQGNTIGSGGVGSSYADDHELNSDG--------LYQGGTYRLGGDSNESENRHHMPVRELAARAAMMRLTAEEEEIQKHCGCGHGRRN 392
BLAST of mRNA_Ecto-sp13_S_contig1211.1796.1 vs. uniprot
Match: A0A7S3XML3_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XML3_HETAK) HSP 1 Score: 204 bits (519), Expect = 1.370e-57 Identity = 96/130 (73.85%), Postives = 109/130 (83.85%), Query Frame = 3
Query: 585 SPYRFERIETLPGLPEEETARKILESLAADPGVRAVLEKHRWTVGALCELYPEGKVGVSDTCVMGLNQNHGMKILLRLRTDDLQGFRKILSIRKVLFHELAHNEFSDHDDNFYMLMRQVEREAAELNWTQ 974
SPYRF RIETLPGLP ++ AR ILE LA D G+ V+EKHRW VGALCELYPEG+VGVS+ CV+GLNQN G KILLRLRTDDL+GFRK L +KVL+HELAH DHDD+FY LMRQ+EREAAEL+WTQ
Sbjct: 2 SPYRFGRIETLPGLPGQDEARSILEQLANDRGILKVMEKHRWQVGALCELYPEGRVGVSEVCVLGLNQNRGQKILLRLRTDDLRGFRKYLGTKKVLYHELAHMVHDDHDDDFYQLMRQIEREAAELDWTQ 131
BLAST of mRNA_Ecto-sp13_S_contig1211.1796.1 vs. uniprot
Match: A0A7S4N2I3_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4N2I3_9STRA) HSP 1 Score: 206 bits (525), Expect = 3.690e-55 Identity = 141/371 (38.01%), Postives = 191/371 (51.48%), Query Frame = 3
Query: 171 VSFRGKPLTVPGVDHATAVKHLKNKL----EELTAVPVANQKLILKGKALRDEAGTLETAGVLVPSPAQTATTKTATERHEEKGDTFVQKSKLMLVGSKPSEVEEVLRE-QDRVRVRNDLNGEIIPKGYKKVALNHPPGPSDLSP----------------YRFERIETLPGLPEEETARKILESLAADPGVRAVLEKHRWTVGALCELYPEGKVGVSDTCVMGLNQNHGMKILLRLRTDDLQGFRKILSIRKVLFHELAHNEFSDHDDNFYMLMRQVEREAAELNWTQQSGGRTLAGRPPAPRAEPAGLPGGGGGFVLVKEAFEGGSGRLGGDSNAFTKMFSAREMAGQAAVQRLTPEEQEVEDCCGHTK 1220
VSFRG +T V LK +L ++ + + K++ KG+ L ++ L V+ P+ ++ G T + +LM G+ +EVE R ++ R + +I G A G L Y F IE P LPE + AR+IL SLA DPG+ A + KH+W VG L E++P+G VG + CVMGLNQN G KILLRLRTDDL+GFRK LSIRKVLFHELAHN SDH+ +F++LMRQ+E+E E++W + SG T E + FEGG+ RLGGDS + AR++A +AAV RLT EE+E+ CG K
Sbjct: 15 VSFRGTTADFLLTRGSTTVGCLKAQLATSVDDSLGMSAGDVKILHKGRVLSEDDANLYELLVVGPNVGGV----------KKSGSTRRRTVRLMATGASTAEVEARDRAFEEGARAAPRIRDDISQGGITGAARRREEGQRALEMAAARSARTANGGGSLRYGFGAIEIFPNLPERDKAREILTSLANDPGILACMAKHKWNVGCLAEMFPKGYVGQDEVCVMGLNQNKGQKILLRLRTDDLKGFRKNLSIRKVLFHELAHNVHSDHNGDFFLLMRQIEKECNEMDWKRGSGSTTTGTVGCQHAVEENSV-------ATSSRRFEGGTRRLGGDSLGLSHQIPARDLAARAAVMRLTVEEEEIRRGCGCEK 368
BLAST of mRNA_Ecto-sp13_S_contig1211.1796.1 vs. uniprot
Match: A0A7S3V5Z3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V5Z3_9STRA) HSP 1 Score: 200 bits (509), Expect = 9.810e-53 Identity = 145/375 (38.67%), Postives = 202/375 (53.87%), Query Frame = 3
Query: 165 LQVSFRGKP---LTVPGVDHATAVKHLKNK--LEELTAVPVANQKLILKGKALRDEAGTLETAGVLVPSPAQTATTKTATERHEEKGDTFVQKSKLMLVGSKPSEVEEV-----LREQDRVRVRNDLNGEIIPKGYKKVALNHPPGPSDLSP--------------YRFERIETLPGLPEEETARKILESLAADPGVRAVLEKHRWTVGALCELYPEGKVGVSDTCVMGLNQNHGMKILLRLRTDDLQGFRKILSIRKVLFHELAHNEFSDHDDNFYMLMRQVEREAAELNWTQQSGGRTLAGRPPAPRAEPAGLPGGGGGFVLVKEAFEGGSGRLGGDS--NAFTKMFSAREMAGQAAVQRLTPEEQEVEDCCG 1211
L ++FRGK L P + HL N ++ + A KL+ KGK L D+ L +L P + AT + A + + ++M +G+ E ++ + +++ R+R++L+ G ++A G + LS Y F I+TLP LP+++ A+KIL LA DPG+ A + KH W+VG LCELYPEGKVG S+ C+MGLN N G KI LRLRTDDL+GFRKILSIRKVLFHELAHN S HD F+ LMRQVE+E + N + S G G GGGF V +AF+GG+ LG + SARE+ +AA+ R++ EEQ++E+ CG
Sbjct: 33 LIITFRGKKANLLLTPTTIVSDVKAHLVNSDVVDPELKLGPAEVKLLYKGKVLSDDCVNL--FDMLDIYPERIATGQNANIKSKP--------IRIMAMGTSSVEAQQQNLELNIAKRNAPRIRDNLSQ----AGVAEIAARQRQGMNMLSKASKRDSSRDPTQKKYGFGTIQTLPMLPDQQKAKKILHDLAHDPGILACMAKHEWSVGMLCELYPEGKVGESEVCLMGLNTNKGQKIDLRLRTDDLRGFRKILSIRKVLFHELAHNTHSAHDQKFFQLMRQVEQECNDFNASGNSLGGGKGGEGYVA----------GGGFDNV-DAFQGGTYTLGSSDTGSGVPTTLSARELFARAAMSRMSQEEQDIENACG 382 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1211.1796.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1211.1796.1 >prot_Ecto-sp13_S_contig1211.1796.1 ID=prot_Ecto-sp13_S_contig1211.1796.1|Name=mRNA_Ecto-sp13_S_contig1211.1796.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=747bp MELQVSFRGKPLTVPGVDHATAVKHLKNKLEELTAVPVANQKLILKGKALback to top mRNA from alignment at Ecto-sp13_S_contig1211:4044..11499+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1211.1796.1 ID=mRNA_Ecto-sp13_S_contig1211.1796.1|Name=mRNA_Ecto-sp13_S_contig1211.1796.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=7456bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1211:4044..11499+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1211:4044..11499+ >mRNA_Ecto-sp13_S_contig1211.1796.1 ID=mRNA_Ecto-sp13_S_contig1211.1796.1|Name=mRNA_Ecto-sp13_S_contig1211.1796.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=2241bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1211:4044..11499+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |