mRNA_Ecto-sp13_S_contig12105.1793.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig12105.1793.1
Unique NamemRNA_Ecto-sp13_S_contig12105.1793.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig12105.1793.1 vs. uniprot
Match: D7FNY3_ECTSI (DNA-directed RNA polymerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNY3_ECTSI)

HSP 1 Score: 345 bits (884), Expect = 3.070e-113
Identity = 176/184 (95.65%), Postives = 179/184 (97.28%), Query Frame = 1 
Query:    1 LPDPVLSTLSVNKDLGCVSEAFQKSLQAFLDSNPAPLRDDHTKEDLKALAATGTSSPLGPNSLKEAFELLMWVKYMRCLANPGETVGSIAAQSVGEPSTQMTLNTFHLAGHGGANVTLGIPRLREIIMTAAKNLKTPSMVVPLREGADRPAAKSLALRLSRLPLSQLLDNRGGIVVRERLVKGD 552
            LPDPVLSTLSVNKDLGCVSEAFQKSLQAFLDSNPA LR DHTKE+ KA+AA+GTSSP GP SLKEAFELLMWVKYMRCLANPGETVGSIAAQSVGEPSTQMTLNTFHLAGHGGANVTLGIPRLREIIMTAAKNLKTPSMVVPLREGADRPAAKSLALRLSRLPLSQLLDNRGGIVVRERLVKGD
Sbjct:   48 LPDPVLSTLSVNKDLGCVSEAFQKSLQAFLDSNPASLRGDHTKENSKAVAASGTSSPPGPGSLKEAFELLMWVKYMRCLANPGETVGSIAAQSVGEPSTQMTLNTFHLAGHGGANVTLGIPRLREIIMTAAKNLKTPSMVVPLREGADRPAAKSLALRLSRLPLSQLLDNRGGIVVRERLVKGD 231
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BLAST of mRNA_Ecto-sp13_S_contig12105.1793.1 vs. uniprot
Match: A0A6H5KJ16_9PHAE (DNA-directed RNA polymerase subunit n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ16_9PHAE)

HSP 1 Score: 316 bits (809), Expect = 1.650e-96
Identity = 164/182 (90.11%), Postives = 167/182 (91.76%), Query Frame = 1 
Query:    1 LPDPVLSTLSVNKDLGCVSEAFQKSLQAFLDSNPAPLRDDHTKEDLKALAATGTSSPLGPNSLKEAFELLMWVKYMRCLANPGETVGSIAAQSVGEPSTQMTLNTFHLAGHGGANVTLGIPRLREIIMTAAKNLKTPSMVVPLREGADRPAAKSLALRLSRLPLSQLLDNRGGIVVRERLVK 546
            LPDPVLSTL+VNKDLGCVSEAFQKSLQAFLDSNPA LR DHT +  KA AATG  S  G  SLKEAFELLMWVKYMRCLANPGETVGSIAAQSVGEPSTQMTLNTFHLAGHGGANVTLGIPRLREIIMTAAKNLKTPSMVVPLREGADR  A+SLA RLSRLPLSQLLDNRGGIVVRERLVK
Sbjct: 1277 LPDPVLSTLNVNKDLGCVSEAFQKSLQAFLDSNPASLRGDHTNDSSKAGAATGRLSSPGVRSLKEAFELLMWVKYMRCLANPGETVGSIAAQSVGEPSTQMTLNTFHLAGHGGANVTLGIPRLREIIMTAAKNLKTPSMVVPLREGADRSTARSLARRLSRLPLSQLLDNRGGIVVRERLVK 1458
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BLAST of mRNA_Ecto-sp13_S_contig12105.1793.1 vs. uniprot
Match: A0A7S3HIX0_9STRA (DNA-directed RNA polymerase n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HIX0_9STRA)

HSP 1 Score: 189 bits (481), Expect = 2.190e-53
Identity = 102/180 (56.67%), Postives = 130/180 (72.22%), Query Frame = 1 
Query:    1 LPDPVLSTLSVNKDLGCVSEAFQKSLQAFLDSNPAPLRDDHTKEDLKALAATGTSSPLGPNSLKEAFELLMWVKYMRCLANPGETVGSIAAQSVGEPSTQMTLNTFHLAGHGGANVTLGIPRLREIIMTAAKNLKTPSMVVPLREGADRPAAKSLALRLSRLPLSQLLDNRGGIVVRERL 540
            LP P +STL +++ +G VSEA Q+ ++ ++  NP  +  D            G  + +  +SL    ELL+WVKY+R +A PGE VG +AAQSVGEPSTQMTLNTFHLAGHGGANVTLGIPRLREIIMTA++NLKTP+M  P+    D  AAK+LA +LSRLPLSQLL ++GGIVV E++
Sbjct:   81 LPAPAMSTLRLDRSVGAVSEALQQKVRDYVKKNPDGVITD-----------VGADTTVTGDSL----ELLVWVKYLRSMACPGEAVGCVAAQSVGEPSTQMTLNTFHLAGHGGANVTLGIPRLREIIMTASRNLKTPTMYAPMCVPRDNIAAKALARKLSRLPLSQLLSHQGGIVVGEQI 245
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BLAST of mRNA_Ecto-sp13_S_contig12105.1793.1 vs. uniprot
Match: A0A836C8M0_9STRA (DNA-directed RNA polymerase subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8M0_9STRA)

HSP 1 Score: 189 bits (481), Expect = 2.150e-52
Identity = 105/183 (57.38%), Postives = 128/183 (69.95%), Query Frame = 1 
Query:    7 DPVLSTLSVNKDLGCVSEAFQKSLQAFLDSNPAPLRDDHTKEDLKALAATGTSSPLGPNSLKEAFELLMWVKYMRCLANPGETVGSIAAQSVGEPSTQMTLNTFHLAGHGGANVTLGIPRLREIIMTAAKNLKTPSMVVPLREGADRPAAKSLALRLSRLPLSQLLDNRGG-IVVRERLVKGD 552
            DPVLSTL+VN+DLG VSE F   L+AF+ +      + H +         G  S     + ++ F ++MWVKYMR LA PGE VG+IA QSVGEPSTQMTLNTFHLAGHGGANVTLGIPRLREI+MTA++ LKTP+  VPL  G  R   ++LA  L+RLPL +LL N GG + VRE+L KGD
Sbjct: 1108 DPVLSTLNVNQDLGAVSERFHARLEAFMAA------ESHRR---------GLLSGRRGAAARDDFTVMMWVKYMRSLAAPGEAVGAIAGQSVGEPSTQMTLNTFHLAGHGGANVTLGIPRLREIVMTASRALKTPAATVPLLRGVSRAQGEALARLLTRLPLLELLLNTGGGVTVREKLGKGD 1275
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BLAST of mRNA_Ecto-sp13_S_contig12105.1793.1 vs. uniprot
Match: A0A024TY59_9STRA (DNA-directed RNA polymerase subunit n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TY59_9STRA)

HSP 1 Score: 176 bits (446), Expect = 1.100e-47
Identity = 95/179 (53.07%), Postives = 121/179 (67.60%), Query Frame = 1 
Query:    1 LPDPVLSTLSVNKDLGCVSEAFQKSLQAFLDSNPAPLRDDHTKEDLKALAATGTS-SPLGPNSLKEAFELLMWVKYMRCLANPGETVGSIAAQSVGEPSTQMTLNTFHLAGHGGANVTLGIPRLREIIMTAAKNLKTPSMVVPLREGADRPAAKSLALRLSRLPLSQLLDNRGGIVVRE 534
            LPDPV+  L +N  +G VSE  Q  ++A+   NPA L +    + L A A +    SPLG       F L++WVKYMR L  PGE VG+I AQS+GEPSTQMTLNTFHLAGHG ANVTLGIPRLREIIMTA++ + TP M VPL       AA+++  RL+++PL++LL N  GI V++
Sbjct: 1226 LPDPVMHQLPLNAHIGVVSEKTQLDIEAYAKGNPAGLLESKKTKALPAAAKSPMMLSPLG-------FRLMVWVKYMRSLCQPGENVGTICAQSIGEPSTQMTLNTFHLAGHGAANVTLGIPRLREIIMTASQKMSTPMMTVPLLPTTSAAAAQAVEQRLNQVPLAELLRNTKGIRVQD 1397
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BLAST of mRNA_Ecto-sp13_S_contig12105.1793.1 vs. uniprot
Match: A0A1V9ZTF5_9STRA (DNA-directed RNA polymerase subunit n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZTF5_9STRA)

HSP 1 Score: 174 bits (442), Expect = 3.780e-47
Identity = 88/184 (47.83%), Postives = 121/184 (65.76%), Query Frame = 1 
Query:    1 LPDPVLSTLSVNKDLGCVSEAFQKSLQAFLDSNPAPLRDDHTKEDLKALAATGTSSPLGPNSLKEAFELLMWVKYMRCLANPGETVGSIAAQSVGEPSTQMTLNTFHLAGHGGANVTLGIPRLREIIMTAAKNLKTPSMVVPLREGADRPAAKSLALRLSRLPLSQLLDNRGGIVVRERLVKGD 552
            LPDPV+  L +N  +GC+SE  Q  ++A+  +NP+ L +    +             LG      AF L++WVKYMR L  PGE VG+I AQS+GEPSTQMTLNTFHLAGHG ANVTLGIPRLREIIMTA+K + TP M +PL   A   A  ++  +L+++PL++L+ N  GI V+++ ++ +
Sbjct: 1193 LPDPVMHALPLNSHIGCISEKSQGHIEAYSKANPSNLLESKKNK-------------LGGVVSASAFRLMVWVKYMRSLCQPGENVGTICAQSIGEPSTQMTLNTFHLAGHGAANVTLGIPRLREIIMTASKKMSTPMMTIPLMPSASAAAGMAVEQQLNQVPLAELIRNTKGIRVQDQFLEAE 1363
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BLAST of mRNA_Ecto-sp13_S_contig12105.1793.1 vs. uniprot
Match: K8YRY5_NANGC (DNA-directed RNA polymerase subunit n=2 Tax=Monodopsidaceae TaxID=425072 RepID=K8YRY5_NANGC)

HSP 1 Score: 174 bits (440), Expect = 7.040e-47
Identity = 96/183 (52.46%), Postives = 122/183 (66.67%), Query Frame = 1 
Query:    1 LPDPVL--STLSVNKDLGCVSEAFQKSLQAFLDSNPAPLRDDHTKEDLKALAATGTSSPLGPNSLKEAFELLMWVKYMRCLANPGETVGSIAAQSVGEPSTQMTLNTFHLAGHGGANVTLGIPRLREIIMTAAKNLKTPSMVVPLREGADRPAAKSLALRLSRLPLSQLLDN-RGGIVVRERL 540
            LPDPVL  +   +   LG +SE FQ +++ +L  +P  L                  S +G +  K   ELL+W+KYMR L +PGE VGSIA QS+GEPSTQMTLNTFHLAGHGGANVTLGIPRLREIIMTA++N KTPSM VPL     R  A+ L+ RL RL L +++ + +GG++V+ERL
Sbjct: 1262 LPDPVLGRAKTQLGLHLGAISERFQDAIEDYLGRDPEHLFQ---------------KSEMGGSKSKAGLELLLWLKYMRSLTSPGEAVGSIAGQSIGEPSTQMTLNTFHLAGHGGANVTLGIPRLREIIMTASRNPKTPSMTVPLCTSISRSEAQRLSARLRRLQLLEVVHHTQGGVLVKERL 1429
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BLAST of mRNA_Ecto-sp13_S_contig12105.1793.1 vs. uniprot
Match: A0A482SXB0_9ARCH (DNA-directed RNA polymerase n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SXB0_9ARCH)

HSP 1 Score: 172 bits (435), Expect = 3.210e-46
Identity = 94/176 (53.41%), Postives = 114/176 (64.77%), Query Frame = 1 
Query:   19 STLSVNKDLGCVSEAFQKSLQAFLDSNPAPLRDDHTKEDLKALAATGTSSPLGPNSLKEAFELLMWVKYMRCLANPGETVGSIAAQSVGEPSTQMTLNTFHLAGHGGANVTLGIPRLREIIMTAAKNLKTPSMVVPLREGADRPAAKSLALRLSRLPLSQLLDNRGGIVVRERLVK 546
            S L +   +G VSE  Q S+  ++  NP  +                 S P       E+ ELL+W+KYMR LA PGE VG +AAQS+GEPSTQMTLNTFHLAGHGGANVTLGIPRLREIIMTA+K LKTP MVVPL       AA+SLA +LS LPL+ LL ++GG+ V E + +
Sbjct:  688 SKLKLGNTVGAVSEKIQDSIVDYVTKNPDKVIH---------------SEPSDSTVTAESLELLIWIKYMRSLACPGEAVGCVAAQSIGEPSTQMTLNTFHLAGHGGANVTLGIPRLREIIMTASKTLKTPMMVVPLAPNRTMEAARSLARKLSCLPLATLLHHQGGVEVGESMTR 848
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BLAST of mRNA_Ecto-sp13_S_contig12105.1793.1 vs. uniprot
Match: A0A1V9ZEK2_9STRA (DNA-directed RNA polymerase subunit n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZEK2_9STRA)

HSP 1 Score: 171 bits (433), Expect = 6.120e-46
Identity = 86/184 (46.74%), Postives = 121/184 (65.76%), Query Frame = 1 
Query:    1 LPDPVLSTLSVNKDLGCVSEAFQKSLQAFLDSNPAPLRDDHTKEDLKALAATGTSSPLGPNSLKEAFELLMWVKYMRCLANPGETVGSIAAQSVGEPSTQMTLNTFHLAGHGGANVTLGIPRLREIIMTAAKNLKTPSMVVPLREGADRPAAKSLALRLSRLPLSQLLDNRGGIVVRERLVKGD 552
            LPDPV+  L +N  +GCVSE  Q+ ++ +  +NP+ L +    +             +G      AF L++WVKYMR L  PGE VG+I AQS+GEPSTQMTLNTFHLAGHG ANVTLGIPRLREIIMTA+K + TP M +P+   A    A ++  +L+++PL++L+ N  GI V+++ ++ +
Sbjct: 1195 LPDPVMHALQLNNHIGCVSEKTQQHIETYSKANPSNLLESKKNK-------------IGGVVSSSAFRLMVWVKYMRSLCQPGENVGTICAQSIGEPSTQMTLNTFHLAGHGAANVTLGIPRLREIIMTASKKMSTPMMTIPVLPTATPAQAVAVEQKLNQVPLAELIRNTKGIRVQDQFLESE 1365
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BLAST of mRNA_Ecto-sp13_S_contig12105.1793.1 vs. uniprot
Match: A0A418BIQ5_9STRA (DNA-directed RNA polymerase (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A418BIQ5_9STRA)

HSP 1 Score: 169 bits (429), Expect = 2.060e-45
Identity = 91/179 (50.84%), Postives = 119/179 (66.48%), Query Frame = 1 
Query:    1 LPDPVLSTLSVNKDLGCVSEAFQKSLQAFLDSNPAPLRDDHTKEDLKALAATGTS-SPLGPNSLKEAFELLMWVKYMRCLANPGETVGSIAAQSVGEPSTQMTLNTFHLAGHGGANVTLGIPRLREIIMTAAKNLKTPSMVVPLREGADRPAAKSLALRLSRLPLSQLLDNRGGIVVRE 534
            +PDPV+  L +N  +G +SE  Q  ++++  +NPA L +    + L   A +    SPLG       F L++WVKYMR L  PGE VG+I AQS+GEPSTQMTLNTFHLAGHG ANVTLGIPRLREIIMTA++ + TP M VPL       AA+ +  RL+++PLS+L+ N  GI V +
Sbjct:  750 VPDPVMHQLPLNAHIGVISEKTQLEIESYAKTNPAGLLESKKTKALPVEAQSPMMLSPLG-------FRLMVWVKYMRSLCQPGENVGTICAQSIGEPSTQMTLNTFHLAGHGAANVTLGIPRLREIIMTASQKMSTPMMTVPLLATTSPAAAQQVEQRLNQVPLSELIRNVKGIRVTD 921
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12105.1793.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FNY3_ECTSI3.070e-11395.65DNA-directed RNA polymerase n=1 Tax=Ectocarpus sil... [more]
A0A6H5KJ16_9PHAE1.650e-9690.11DNA-directed RNA polymerase subunit n=1 Tax=Ectoca... [more]
A0A7S3HIX0_9STRA2.190e-5356.67DNA-directed RNA polymerase n=1 Tax=Spumella elong... [more]
A0A836C8M0_9STRA2.150e-5257.38DNA-directed RNA polymerase subunit n=1 Tax=Tribon... [more]
A0A024TY59_9STRA1.100e-4753.07DNA-directed RNA polymerase subunit n=1 Tax=Aphano... [more]
A0A1V9ZTF5_9STRA3.780e-4747.83DNA-directed RNA polymerase subunit n=1 Tax=Achlya... [more]
K8YRY5_NANGC7.040e-4752.46DNA-directed RNA polymerase subunit n=2 Tax=Monodo... [more]
A0A482SXB0_9ARCH3.210e-4653.41DNA-directed RNA polymerase n=1 Tax=archaeon TaxID... [more]
A0A1V9ZEK2_9STRA6.120e-4646.74DNA-directed RNA polymerase subunit n=1 Tax=Thraus... [more]
A0A418BIQ5_9STRA2.060e-4550.84DNA-directed RNA polymerase (Fragment) n=1 Tax=Aph... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12105contigEcto-sp13_S_contig12105:1763..3739 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score345.5
Seed ortholog evalue1.5e-92
Seed eggNOG ortholog2880.D7FNY3
Preferred nameRPA1
Model size552
KEGG rclassRC02795
KEGG koko:K02999
KEGG ReactionR00435,R00441,R00442,R00443
KEGG Pathwayko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020
KEGG ModuleM00182
Hectar predicted targeting categoryother localisation
GOsGO:0000428,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0005736,GO:0005911,GO:0006139,GO:0006351,GO:0006360,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009506,GO:0009987,GO:0010467,GO:0016070,GO:0018130,GO:0019438,GO:0030054,GO:0030880,GO:0031974,GO:0031981,GO:0032774,GO:0032991,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044452,GO:0044464,GO:0046483,GO:0055029,GO:0055044,GO:0061695,GO:0070013,GO:0071704,GO:0090304,GO:0097659,GO:1901360,GO:1901362,GO:1901576,GO:1902494,GO:1990234
Exons3
EggNOG free text desc.negative regulation of protein localization to nucleolus
EggNOG OGsCOG0086@1,KOG0262@2759
EC2.7.7.6
Cds size552
COG Functional cat.K
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEbr01611,ko00000,ko00001,ko00002,ko01000,ko03021
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462643.8589177-CDS-Ecto-sp13_S_contig12105:1762..19091681462643.8589177-CDS-Ecto-sp13_S_contig12105:1762..1909Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12105 1763..1909 -
1681462643.8779402-CDS-Ecto-sp13_S_contig12105:2534..28921681462643.8779402-CDS-Ecto-sp13_S_contig12105:2534..2892Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12105 2535..2892 -
1681462643.8888464-CDS-Ecto-sp13_S_contig12105:3692..37391681462643.8888464-CDS-Ecto-sp13_S_contig12105:3692..3739Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12105 3693..3739 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12105.1793.1prot_Ecto-sp13_S_contig12105.1793.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig12105 1763..3739 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig12105.1793.1

>prot_Ecto-sp13_S_contig12105.1793.1 ID=prot_Ecto-sp13_S_contig12105.1793.1|Name=mRNA_Ecto-sp13_S_contig12105.1793.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=184bp
LPDPVLSTLSVNKDLGCVSEAFQKSLQAFLDSNPAPLRDDHTKEDLKALA
ATGTSSPLGPNSLKEAFELLMWVKYMRCLANPGETVGSIAAQSVGEPSTQ
MTLNTFHLAGHGGANVTLGIPRLREIIMTAAKNLKTPSMVVPLREGADRP
AAKSLALRLSRLPLSQLLDNRGGIVVRERLVKGD
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mRNA from alignment at Ecto-sp13_S_contig12105:1763..3739-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig12105.1793.1 ID=mRNA_Ecto-sp13_S_contig12105.1793.1|Name=mRNA_Ecto-sp13_S_contig12105.1793.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1977bp|location=Sequence derived from alignment at Ecto-sp13_S_contig12105:1763..3739- (Ectocarpus species13 EcNAP12_S_4_19m)
CTTCCCGATCCCGTGTTATCGACCCTCAGTGTTAACAAGGACTTGGGGTG
AGCACACGATTTTAGCAGCATTCGTGCATGAATGGTTTGACTGGGTCAGA
TAGACGCTACCAAAATCGGTATGAATAGATTCTCCGGGGGAGAAAATGAT
AGTTTCGATTGTAGAAACTCTCAATTCTTGTGCGCTCATGACCCGGTGAC
GATGACTCTTGAAACAAACACACCGAATTTCTGATATACGTGTGGATATT
GAAAAGAGACACCTGTGTTTCTGAGGGTCTTGTGTTCTGGTCTGTAAGAG
AATATTTGCACATCGTAATCTACAGCCTTGGGGCACAGCGAGCGACTGAG
TGACTTGGGCAGGGTTGCTTGGGTGGCCATTGTTTCATCAAACATTGGCC
GGGCTGCCATCGTACGCCACAGATGCGCTGGCTCACACCTACACAACGTG
CTGTGAGTTGAGCTTCGACGGGCCATGGACAACCAGGCCCTTGTTAAGGT
TTCAAGAGGCGGACCCTTGTTTGAAAAAAAAAAAAAAAATTTGTACCAAT
CGCGGAATGAAATGGATAGTATCCCTCTCTCGCGAAGAGCTTGGTGTTTC
CCTAGCGATGGGTGGTCGCGTCGGTTACTGGTGTTATTCCGGCATCGATA
ACATCTGAACCCATCCGACGTTTGGGGCGACGTCATGCTGTTTCATGCTT
TGTCGTTCGGAGCTTTCAAGACAGCCTATCCGCTGCCCCGCACCGCAGTT
TTCCTCTGCTCTCGTTTCGTCTGCCGTTAGGACAACCACCTCCCTCGCTG
TGCTTTCTCCCGTACCGGGCGCCTTCCTCTTGGCACCGCCGCAACAGGTG
CGTGAGCGAAGCCTTCCAGAAGTCTCTGCAGGCCTTCCTTGACAGCAACC
CGGCACCGCTCCGCGACGACCACACGAAGGAGGATCTGAAAGCCCTGGCT
GCAACCGGAACGTCGTCTCCCCTTGGCCCCAATTCGCTCAAGGAGGCGTT
CGAGCTGCTCATGTGGGTCAAGTACATGCGTTGTTTGGCTAATCCGGGGG
AGACGGTTGGTTCCATCGCAGCGCAGTCTGTCGGCGAGCCGTCGACCCAG
ATGACCCTGAACACGTTCCATCTGGCGGGGCACGGCGGGGCGAACGTGAC
GCTGGGGATCCCGAGGCTGAGGGAGATTATCATGACGGCGGCAAAAAATC
TCAAGGTACTTGTTTGAAGAGCCGTGATTTAAGTGCCCTCCTTTGGTGGA
TTTCGACGAAGAGTCTTGATAAATGAAGTGTTGATTTTGCTCGTTTGCCT
GGTGGTGCGTTGAAACTTGGCGTGAACGTTCTTTCGGTTCTCAAGAGAGA
GAGACGCGGCGTGTCGCGTTGTGTGTCGTTTTTGTGTTTGGTAGGTAAGC
GGTTAATATCTTTGACACGCAGGACTTGCTTGCCAGGAACCAGTTAGGAG
TACAAGACCCCCATTCAGTGTGGTGTATTTGCCCGAGCCCGTGTGGGATG
TAATAGTTTGGAAAATGGCAGGCACCCCGACTCGGGGAAGGGGATGCCAC
TGGGGAGTCCCACACTTAAACACATGTGTATTCTGAATGGAAAAGTCGAG
AAGGGTCATTGTGTGCACGGAGAATCTAGCCTGCTTGCTCGCGTGCTTGC
GACCTTACTGTCAACCCGTTGTGGTCTGTCCTCGAACCCTATTTGGAGTC
CTCTCGTGGTCTCCAACCCTCCGAGGCACTCCTTGCCGATATCAAGAGAG
CCTTGGAGCTTGAAGAAACACCGCCCCAAACCCCTTTTTTCCATTTGTTT
CTGGTTGTCTTGCCGCATGTATACATCCAGACGCCTTCCATGGTGGTGCC
TCTCCGCGAAGGTGCCGATCGACCTGCGGCGAAGTCTCTCGCTCTCCGTC
TCTCGCGCCTGCCTCTGTCCCAGCTGCTGGACAACCGAGGGGGAATCGTC
GTGCGCGAACGGCTGGTGAAAGGAGAT
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig12105:1763..3739-

>mRNA_Ecto-sp13_S_contig12105.1793.1 ID=mRNA_Ecto-sp13_S_contig12105.1793.1|Name=mRNA_Ecto-sp13_S_contig12105.1793.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=552bp|location=Sequence derived from alignment at Ecto-sp13_S_contig12105:1763..3739- (Ectocarpus species13 EcNAP12_S_4_19m)
CTTCCCGATCCCGTGTTATCGACCCTCAGTGTTAACAAGGACTTGGGGTG
CGTGAGCGAAGCCTTCCAGAAGTCTCTGCAGGCCTTCCTTGACAGCAACC
CGGCACCGCTCCGCGACGACCACACGAAGGAGGATCTGAAAGCCCTGGCT
GCAACCGGAACGTCGTCTCCCCTTGGCCCCAATTCGCTCAAGGAGGCGTT
CGAGCTGCTCATGTGGGTCAAGTACATGCGTTGTTTGGCTAATCCGGGGG
AGACGGTTGGTTCCATCGCAGCGCAGTCTGTCGGCGAGCCGTCGACCCAG
ATGACCCTGAACACGTTCCATCTGGCGGGGCACGGCGGGGCGAACGTGAC
GCTGGGGATCCCGAGGCTGAGGGAGATTATCATGACGGCGGCAAAAAATC
TCAAGACGCCTTCCATGGTGGTGCCTCTCCGCGAAGGTGCCGATCGACCT
GCGGCGAAGTCTCTCGCTCTCCGTCTCTCGCGCCTGCCTCTGTCCCAGCT
GCTGGACAACCGAGGGGGAATCGTCGTGCGCGAACGGCTGGTGAAAGGAG
AT
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