mRNA_Ecto-sp13_S_contig12103.1792.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig12103.1792.1
Unique NamemRNA_Ecto-sp13_S_contig12103.1792.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig12103.1792.1 vs. uniprot
Match: A0A6H5KDC0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDC0_9PHAE)

HSP 1 Score: 419 bits (1076), Expect = 5.650e-140
Identity = 220/233 (94.42%), Postives = 228/233 (97.85%), Query Frame = 1 
Query:  523 AGDTEKASGAKQEGGDNNKDDEEKESRTVFVGNLPTSFTPKKVKAAFKEYGAVESVRLRSVAVQGMAVDKAGDQQLVRKVCVNRGMVDEEVKSSVNAYVVYKDGASVEKALAANGTDVGGKHVRVDRAKSGEYDHTRSVFLGNLPMDAGEEEVRELFASKLEGGPKAVEGVRLVRDKATLVGKGFGYVLLADRALAAAALALQGTKLKGRPLRVMPCGKRTKGRGGVAKPGLE 1221
            AG+TEKASGAK+EG +++KDDEE+ESRTVFVGNLPTSFTPKKVKAAFKEYGAVESVRLRSVAV+G AVDKAGDQQLVRKVCVNRGMVDEEVKSSVNAYVVYKDGASVEKALAANGTDVGGKHVRVDRAKSGEYDHTRSVFLGNLPMDA EEEVRELFASKLEGGPK+VEGVRLVRDKATLVGKGFGYVLLADRALAAAALAL GTKLKGRPLRVMPCGKRTKGRGGVAKPG E
Sbjct:  290 AGNTEKASGAKEEGSNDDKDDEERESRTVFVGNLPTSFTPKKVKAAFKEYGAVESVRLRSVAVKGTAVDKAGDQQLVRKVCVNRGMVDEEVKSSVNAYVVYKDGASVEKALAANGTDVGGKHVRVDRAKSGEYDHTRSVFLGNLPMDAAEEEVRELFASKLEGGPKSVEGVRLVRDKATLVGKGFGYVLLADRALAAAALALHGTKLKGRPLRVMPCGKRTKGRGGVAKPGQE 522
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BLAST of mRNA_Ecto-sp13_S_contig12103.1792.1 vs. uniprot
Match: D8LFV0_ECTSI (White-brown-complex ABC transporter family (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFV0_ECTSI)

HSP 1 Score: 402 bits (1033), Expect = 2.110e-130
Identity = 216/233 (92.70%), Postives = 218/233 (93.56%), Query Frame = 1 
Query:  523 AGDTEKASGAKQEGGDNNKDDEEKESRTVFVGNLPTSFTPKKVKAAFKEYGAVESVRLRSVAVQGMAVDKAGDQQLVRKVCVNRGMVDEEVKSSVNAYVVYKDGASVEKALAANGTDVGGKHVRVDRAKSGEYDHTRSVFLGNLPMDAGEEEVRELFASKLEGGPKAVEGVRLVRDKATLVGKGFGYVLLADRALAAAALALQGTKLKGRPLRVMPCGKRTKGRGGVAKPGLE 1221
            AGDT KAS  K+           KESRTVFVGNLPTSFTPKKVKAAFKEYGAVESVRLRSVAVQGMAVDKAGDQQLVRKVCVNRGMVDEEVKSSVNAYVVYKD ASVEKALAANGTDVGGKHVRVDRAKSGEYDHTRSVFLGNLPMDAGEEEVRELFASKLEGGPK+VEGVRLVRDKATLVGKGFGYVLLADRALAAAALALQGTKLKGRPLRVMPCGKRTKGRGGVAKPGLE
Sbjct:  304 AGDTAKASAPKEXXXXXXXXXXXKESRTVFVGNLPTSFTPKKVKAAFKEYGAVESVRLRSVAVQGMAVDKAGDQQLVRKVCVNRGMVDEEVKSSVNAYVVYKDCASVEKALAANGTDVGGKHVRVDRAKSGEYDHTRSVFLGNLPMDAGEEEVRELFASKLEGGPKSVEGVRLVRDKATLVGKGFGYVLLADRALAAAALALQGTKLKGRPLRVMPCGKRTKGRGGVAKPGLE 536
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BLAST of mRNA_Ecto-sp13_S_contig12103.1792.1 vs. uniprot
Match: W7U9S2_9STRA (Rna binding protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U9S2_9STRA)

HSP 1 Score: 194 bits (493), Expect = 2.200e-53
Identity = 109/198 (55.05%), Postives = 135/198 (68.18%), Query Frame = 1 
Query:  592 KESRTVFVGNLPTSFTPKKVKAAFKEYGAVESVRLRSVAVQGMAVDKAGDQQLVRKVCVNRGMVDEEVKSSVNAYVVYKDGASVEKALAANGTDVGGKHVRVDRAKSGEY-DHTRSVFLGNLPMDAGEEEVRELFASKLEGGPKAVEGVRLVRDKATLVGKGFGYVLLADRALAAAALALQGTKLKGRPLRVMPCGKR 1182
            KE RT+FVGNLPTS + K+V+  FKEYG +ESVR RS+A+ G  +D  G+Q+L +KV  N+ ++  + K + NAYVV+    S E A+AAN   V  KH+RVDR  S    D  RSVFLGNLP DA E+ +R   A +LEGGP  VEGVRLVRD  T  GKGFG+VLL D+A  AAAL L GT  +GR +RV  CGKR
Sbjct:  207 KERRTIFVGNLPTSISKKRVQNIFKEYGEIESVRFRSMALAGAKIDDHGNQRLAKKVSANKRLLS-DAKDTFNAYVVFLREDSAEAAIAANNRLVEAKHLRVDRVGSETIRDPKRSVFLGNLPFDAKEDTIRAHVAQELEGGPGDVEGVRLVRDPETQQGKGFGFVLLKDKASVAAALRLNGTSFQGRKIRVTTCGKR 403
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BLAST of mRNA_Ecto-sp13_S_contig12103.1792.1 vs. uniprot
Match: A0A7R9UAS7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UAS7_9STRA)

HSP 1 Score: 190 bits (482), Expect = 4.070e-53
Identity = 101/204 (49.51%), Postives = 141/204 (69.12%), Query Frame = 1 
Query:  589 EKESRTVFVGNLPTSFTPKKVKAAFKEYGAVESVRLRSVAVQGMAVDKAGDQQLVRKVCVNRGMVDEEVKSSVNAYVVYKDGASVEKALAANGTDVGGKHVRVDRAKSGE--YDHTRSVFLGNLPMDAGEEEVRELFASKLEG--GPKAVEGVRLVRDKATLVGKGFGYVLLADRALAAAALALQGTKLKGRPLRVMPCGKRTK 1188
            E++ RT+FVGNLP S   + V+  F  YG VE+VRLRS+AV+G+ +D+AG+Q L+RKV  NRG +D +VK S NAYV Y+D  +V+KAL A+G ++G +H+RVDR +  +  ++ +R++FLG+LP    EE+VR  F   L    G   V+GVRL+RDK+TL+GKGFGY+LL+ +A  A AL L      GR  RV  CG+R K
Sbjct:   83 EEKQRTIFVGNLPVSLKKRHVERFFSRYGRVEAVRLRSMAVKGVKIDEAGNQSLMRKVAANRGELDTDVKKSCNAYVRYEDKEAVDKALEADGAELGDRHIRVDRLQGSQALFNASRTLFLGSLPYTVDEEDVRHKFIELLSASHGGDVVQGVRLIRDKSTLLGKGFGYLLLSSKAAVADALRLPEVSFGGRVARVQTCGRRFK 286
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BLAST of mRNA_Ecto-sp13_S_contig12103.1792.1 vs. uniprot
Match: A0A835YND0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YND0_9STRA)

HSP 1 Score: 187 bits (476), Expect = 1.190e-51
Identity = 106/203 (52.22%), Postives = 131/203 (64.53%), Query Frame = 1 
Query:  595 ESRTVFVGNLPTSFTPKKVKAAFKEYGAVESVRLRSVAVQGMAVDKAGDQQLVRKVCVNRGMVDEEVKSSVNAYVVYKDGASVEKALAANGTDVGGKHVRVDRAKSGEYDHTRSVFLGNLPMDAGEEEVRELFASKLEGGPKAVEGVRLVRDKATLVGKGFGYVLLADRALAAAALALQGTKLKGRPLRVMPCGKRTKG-RGG 1200
            E+RTVFVGN+P      K+ + FKEYG VE+V             +AG+Q L+RK C+  G ++E+VK SVNAY+V++D  S   ALAANG ++ G H+RVD A     D  RSVFLGNLP D  EEEVR  F+   E G  A+EGVRL+RD  T +GKGFGYVL  D A   AAL L G+ L+ R LRV  CG+RTKG RGG
Sbjct:  192 EARTVFVGNVPVKLKRDKIASFFKEYGKVETVL------------EAGNQALMRKACIATGKINEKVKDSVNAYIVFQDAESARAALAANGRELNGHHLRVDSAARPTVDPARSVFLGNLPFDVREEEVRAHFSEISEDGTAAIEGVRLIRDPDTQLGKGFGYVLFRDAATVGAALRLDGSALRKRELRVHVCGRRTKGGRGG 382
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BLAST of mRNA_Ecto-sp13_S_contig12103.1792.1 vs. uniprot
Match: A0A448ZNA7_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZNA7_9STRA)

HSP 1 Score: 167 bits (423), Expect = 5.000e-44
Identity = 102/214 (47.66%), Postives = 135/214 (63.08%), Query Frame = 1 
Query:  574 NKDDEEKESRTVFVGNLPTSFTPKKVKAAFKEYGAVESVRLRSVAVQGMAV--DKAGDQQLVRKVCVNRGMVDEEVKSSVNAYVVYKDGASVEKALAANGT-DVGGKHVRVDRAKSGEYDHTRSVFLGNLPMDAGEEEVRELFASKLEGGPKAVEGVRLVRDKATLVGKGFGYVLLADRALAAAALALQGTKLKGRPLRVMPCGKRTKGRGGVA 1206
            NK  +E+E RT+FVGNLP + T K + A F+E G V S R+RSV V G+ +  D+AG+Q ++RKVCVN   +D+ +  SV  YVV+K+ A VEKAL  N   ++GG  +RVDRA     D +RSVF+GNLP  A E  ++E F       P+ V GVR+VRDK T   KGFGYVL  ++     AL L G+    + +RVM CGKR KG+ G A
Sbjct:  113 NKPGKEEEERTIFVGNLPLTTTRKGLAALFRECGPVASSRIRSVPVTGIKLPKDQAGNQNMMRKVCVNTNQIDKSLTDSVQGYVVFKELADVEKALEMNNKIELGGMKIRVDRATP-TVDPSRSVFVGNLPYAAKESTLKEHFEXGCLLEPEDVLGVRIVRDKETFQCKGFGYVLFREKNSVPTALKLHGSTYMKKKIRVMVCGKRFKGKKGEA 325
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BLAST of mRNA_Ecto-sp13_S_contig12103.1792.1 vs. uniprot
Match: A0A5D6YDX4_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YDX4_9STRA)

HSP 1 Score: 167 bits (423), Expect = 2.610e-43
Identity = 104/205 (50.73%), Postives = 130/205 (63.41%), Query Frame = 1 
Query:  586 EEKESRTVFVGNLPTSFTPKKVKAAFKEYGAVESVRLRSVAVQGMAVDKAGDQQLVRKVCVNRGMVDEEVKSSVNAYVVYKDGASVEKALAANGTDVGGKHVRVDRAKSGEYDHTRSVFLGNLPMDAGEEEVRELFASKLEGG--PKAVEGVRLVRDKATLVGKGFGYVLLADRALAAAALALQGTKLKGRPLRVMPCGKRTKGR 1194
            E K  RTVFVGN+    T K +KA F   G VE+VRLR + + G AVD+AG+Q+LV KVC N+ ++  + K   NAYV + D ASV  ALA NG  +  + VRVD  ++   D  RSVFLGN+     +E+VR  F  +L     P+ V  VRL+RD+AT VGKGFGYVLL   ALA  ALAL  +KL+GR LRV  CGKR K R
Sbjct:  155 EAKSRRTVFVGNVSLDATAKDLKALFAPCGKVEAVRLRFLPLAGCAVDQAGNQKLVMKVCANKKLLT-DAKDHCNAYVTFADEASVAAALALNGAPLLHRPVRVDH-ETPVVDPRRSVFLGNVGFHVPDEKVRRFFEQRLASDEEPQPVVNVRLIRDRATGVGKGFGYVLLRSAALAGQALALHESKLEGRELRVQVCGKRFKSR 357
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BLAST of mRNA_Ecto-sp13_S_contig12103.1792.1 vs. uniprot
Match: A0A485LPI4_9STRA (Aste57867_24108 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LPI4_9STRA)

HSP 1 Score: 166 bits (420), Expect = 6.550e-43
Identity = 103/211 (48.82%), Postives = 132/211 (62.56%), Query Frame = 1 
Query:  583 DEEKESRTVFVGNLPTSFTPKKVKAAFKEYGAVESVRLRSVAVQGMAVDKAGDQQLVRKVCVNRGMVDEEVKSSVNAYVVYKDGASVEKALAANGTDVGGKHVRVDRAKSGEYDHTRSVFLGNLPMDAGEEEVRELFASKLEGGPKA--VEGVRLVRDKATLVGKGFGYVLLADRALAAAALALQGTKLKGRPLRVMPCGKRTKGRGGVAK 1209
            D EK++RT+F+GN+    T   +K  F   G +ESVRLRSV V G  VDK G Q LV+KVC N+  +  + + S NAY+V+ D  SV+ ALA NG++   K +RVDR K+   D  RSVF+GN+   A +++VR+ F   L  G     VE VRL+RDK T +GKGFGYVLL D + AA ALAL G K+  R LRV  CGKR K   G  K
Sbjct:  145 DIEKDARTIFIGNVSLEATIADIKKHFLACGKIESVRLRSVPVAGCKVDKNGKQNLVKKVCANK-KIFVDGRDSCNAYLVFVDHTSVDAALALNGSEFCSKVIRVDR-KTVSMDAKRSVFVGNVAFTATDDDVRKHFEKALRDGDDTPVVESVRLIRDKTTHLGKGFGYVLLRDVSTAAKALALNGQKMGKRELRVTVCGKRFKNTQGEKK 353
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BLAST of mRNA_Ecto-sp13_S_contig12103.1792.1 vs. uniprot
Match: G4YWD7_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4YWD7_PHYSP)

HSP 1 Score: 163 bits (412), Expect = 1.020e-42
Identity = 96/208 (46.15%), Postives = 135/208 (64.90%), Query Frame = 1 
Query:  583 DEEKESRTVFVGNLPTSFTPKKVKAAFKEYGAVESVRLRSVAVQGMAVDKAGDQQLVRKVCVNRGMVDEEVKSSVNAYVVYKDGASVEKALAANGTDVGGKHVRVDRAKSGEYDHTRSVFLGNLPMDAGEEEVRELFASKL--EGGPKAVEGVRLVRDKATLVGKGFGYVLLADRALAAAALALQGTKLKGRPLRVMPCGKRTKGRGG 1200
            ++EK SRTVFVGN+    T K +K  F   G VESVRLR + + G AV +AG+Q+L+ KVC N+ ++    K + NAYV++ + +SVE AL  NGT +  K +RVDR+     D  RSVF+GN+P    +E++++ FA  L  E  P+ +E VRL+RD+ + +GKGFGY+LL   AL A  LAL+  K++ R LRV  CGKR K + G
Sbjct:   68 EDEKASRTVFVGNVSLDATQKDIKTHFSVCGKVESVRLRHMPIAGCAVGEAGNQKLMMKVCANKKILT-TAKDNCNAYVIFAEESSVEDALKLNGTILVQKKIRVDRSTP-VIDAHRSVFVGNVPFKCTDEQMQQFFAKHLRSEEEPEPIENVRLIRDRESGLGKGFGYLLLKTPALVAKTLALRNLKMETRELRVQVCGKRFKNKRG 273
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BLAST of mRNA_Ecto-sp13_S_contig12103.1792.1 vs. uniprot
Match: A0A067CXJ9_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CXJ9_SAPPC)

HSP 1 Score: 164 bits (416), Expect = 1.070e-42
Identity = 105/218 (48.17%), Postives = 132/218 (60.55%), Query Frame = 1 
Query:  550 AKQEGGDNNKDDEEKESRTVFVGNLPTSFTPKKVKAAFKEYGAVESVRLRSVAVQGMAVDKAGDQQLVRKVCVNRGMVDEEVKSSVNAYVVYKDGASVEKALAANGTDVGGKHVRVDRAKSGEYDHTRSVFLGNLPMDAGEEEVRELFASKLEG-----GPKAVEGVRLVRDKATLVGKGFGYVLLADRALAAAALALQGTKLKGRPLRVMPCGKRTK 1188
            AK E     ++D+EK  RT+FVGN+    T +++K  F   G VES RLRSV V G AVD+ G Q LV+KVC N+ +  E  + + NAYVV+    S+  ALA NG D   K +RVDR K    D  R+VF+GN+   A E+E+R  F S LE      G   VE VR++RDK T +GKGFGYVLL D   AA AL L G+K+  R LRV  CGKR K
Sbjct:  105 AKVEVAPKEEEDDEKAPRTIFVGNVSLEATAEELKKFFSSCGKVESARLRSVPVAGCAVDQHGKQNLVKKVCANKKLFVEG-RDNCNAYVVFASEDSIAAALALNGADFHEKKIRVDR-KVLTTDPKRTVFVGNMAFTATEDEIRNHFESNLEKDDEDEGSALVESVRIIRDKDTHLGKGFGYVLLKDVTTAAKALKLDGSKIGKRELRVSVCGKRFK 320
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12103.1792.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KDC0_9PHAE5.650e-14094.42Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LFV0_ECTSI2.110e-13092.70White-brown-complex ABC transporter family (Partia... [more]
W7U9S2_9STRA2.200e-5355.05Rna binding protein n=1 Tax=Nannochloropsis gadita... [more]
A0A7R9UAS7_9STRA4.070e-5349.51Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
A0A835YND0_9STRA1.190e-5152.22Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A448ZNA7_9STRA5.000e-4447.66Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A5D6YDX4_9STRA2.610e-4350.73Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A485LPI4_9STRA6.550e-4348.82Aste57867_24108 protein n=1 Tax=Aphanomyces stella... [more]
G4YWD7_PHYSP1.020e-4246.15Uncharacterized protein n=1 Tax=Phytophthora sojae... [more]
A0A067CXJ9_SAPPC1.070e-4248.17Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12103contigEcto-sp13_S_contig12103:252..4946 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score409.5
Seed ortholog evalue1.9e-111
Seed eggNOG ortholog2880.D8LFV0
Preferred namemyef2
Model size1221
KEGG koko:K05679,ko:K05681
KEGG TC3.A.1.204
KEGG Pathwayko01523,ko02010,ko04976,map01523,map02010,map04976
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0005488,GO:0005515,GO:0097159,GO:1901363
Exons7
EggNOG free text desc.ATPase activity, coupled to transmembrane movement of substances
EggNOG OGsCOG1131@1,KOG0061@2759,KOG0118@1,KOG0118@2759
Ec32 ortholog descriptionRNA recognition motif domain
Ec32 orthologEc-05_005440.1
Cds size1221
COG Functional cat.V
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko02000,ko04090,ko04147
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12103.1792.1prot_Ecto-sp13_S_contig12103.1792.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig12103 252..4946 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462643.7612927-CDS-Ecto-sp13_S_contig12103:251..3561681462643.7612927-CDS-Ecto-sp13_S_contig12103:251..356Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12103 252..356 -
1681462643.7746985-CDS-Ecto-sp13_S_contig12103:1172..13101681462643.7746985-CDS-Ecto-sp13_S_contig12103:1172..1310Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12103 1173..1310 -
1681462643.784759-CDS-Ecto-sp13_S_contig12103:2288..24171681462643.784759-CDS-Ecto-sp13_S_contig12103:2288..2417Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12103 2289..2417 -
1681462643.7945406-CDS-Ecto-sp13_S_contig12103:2748..28531681462643.7945406-CDS-Ecto-sp13_S_contig12103:2748..2853Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12103 2749..2853 -
1681462643.8041508-CDS-Ecto-sp13_S_contig12103:3175..34601681462643.8041508-CDS-Ecto-sp13_S_contig12103:3175..3460Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12103 3176..3460 -
1681462643.8138814-CDS-Ecto-sp13_S_contig12103:4129..44601681462643.8138814-CDS-Ecto-sp13_S_contig12103:4129..4460Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12103 4130..4460 -
1681462643.825415-CDS-Ecto-sp13_S_contig12103:4818..49461681462643.825415-CDS-Ecto-sp13_S_contig12103:4818..4946Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12103 4819..4946 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig12103.1792.1

>prot_Ecto-sp13_S_contig12103.1792.1 ID=prot_Ecto-sp13_S_contig12103.1792.1|Name=mRNA_Ecto-sp13_S_contig12103.1792.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=407bp
SKVARITKEARARERREEEEAANSGKKKNKKAKKREEEEQENRRKLEAEK
RLQIAAKRTAALAAAAEAVRAGGSAKKVIQSASEELEEDEEEKGEEEDEE
QEQDGEEEEEEEEEEEEEEEERDSDSEPESVIAGQGGDSSDEDMDDMDEG
EEKDNDEDNDGVAKAAGRGKAEAEAGDTEKASGAKQEGGDNNKDDEEKES
RTVFVGNLPTSFTPKKVKAAFKEYGAVESVRLRSVAVQGMAVDKAGDQQL
VRKVCVNRGMVDEEVKSSVNAYVVYKDGASVEKALAANGTDVGGKHVRVD
RAKSGEYDHTRSVFLGNLPMDAGEEEVRELFASKLEGGPKAVEGVRLVRD
KATLVGKGFGYVLLADRALAAAALALQGTKLKGRPLRVMPCGKRTKGRGG
VAKPGLE
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mRNA from alignment at Ecto-sp13_S_contig12103:252..4946-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig12103.1792.1 ID=mRNA_Ecto-sp13_S_contig12103.1792.1|Name=mRNA_Ecto-sp13_S_contig12103.1792.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4695bp|location=Sequence derived from alignment at Ecto-sp13_S_contig12103:252..4946- (Ectocarpus species13 EcNAP12_S_4_19m)
TCAAAGGTTGCTCGAATCACCAAGGAAGCCCGGGCACGGGAACGGAGGGA
GGAGGAAGAGGCAGCCAACTCTGGCAAGAAGAAGAACAAGAAGGCCAAGA
AGAGAGAAGAGGAAGAACAGGAAAACAGGTGATTCCTTTTCCTACGGTTC
CCCCGACAAAAACGTTCGAATAGGGCTGTGTCTGAGAGTTCTGAGTGCTC
CAACCCAGATTTTCTATAATCAAGACGCTCTACTTGAATAGATTTCGCAG
AAGTTCAGCTATCACCGACTTTTATTGACCTTCACCATGCAGCTTTTGGC
ACAGCAGTATTTTTTTTTTGAATATATATTACGTATCGACGCGGACGCTG
CCGGGAGATATTTTCTTCTTCTCAGAGTGGCACAGTCTCATGATTGCAAG
ACACGTCTCTCGCTCAGGAAAGTGTAGCGAACTCCATCCCCCACCGCCCC
GCCGCCCGAAAATTGAATTTCCATGTGAACCGAAAGACGGAAGCTGGAAG
CGGAGAAGCGGTTACAGATCGCGGCGAAACGGACGGCCGCGCTCGCTGCC
GCAGCTGAAGCCGTCCGAGCGGGCGGTTCAGCGAAAAAGGTGATCCAGTC
GGCATCTGAGGAACTAGAGGAGGACGAGGAGGAGAAGGGAGAGGAGGAGG
ACGAGGAACAGGAACAGGATGGGGAGGAAGAGGAGGAGGAGGAAGAGGAG
GAAGAGGAGGAAGAGGAGGAGAGAGATTCTGACAGCGAACCGGAGAGCGT
GATCGCTGGTCAGGGCGGGGATAGCTCCGACGAGGACATGGACGATATGG
ACGAGGGAGAGGAGAAGGTAGGAGCCGGCCATGCGGTATTCCATGCATTT
TTTTTTCGGGCGAGGATGTTGTAGACTGGTTTCATGGCGAGGAAGGTGGT
GTTTCGTTGTCGTTCACAGCGGTGATTATGGCGGGCCTTCTTTATTTCGG
GCGGAGACGGCGTTCGACGAGAAGTCGAGTAGCCAATCGGCGTTTAAGGC
GATACTAGTACGATAAGTTGCCTAGCCAACCAGTCTTGTTGTGGCTGGCA
CTTGGTCCAACAGAGGAGGAGGTCACGCTTCGAGACGCCCGAGAGAGATT
CGCGGAAAAGGCCAGACCAACTCACCCCGGTGTCGTGCCCCGTTATCAAC
CTGGCCTAGACCTATCGTGGCGCAACGCCAACCATCCCTGCCGAGTCCCC
CTACGGTACCTACCTCTACCATGTCTTCGACAACACCACGTCTTGCGCTT
ATCTCGGCCTTGTCTATTGACTTTGCCACCCTTCTTCCTCGCCGCCGCTA
TCCCTTTCAGAAGCTTCCGCGAGGATGTTGAGCTTAGTATTTGTAGGGGG
TACGGGGTTACGGTTAGGGATGGGAATACGAAACCCCTCTCACTTTTCAT
GTATGAAACCCTCGCTGTGGCGGCCCATCCCTTTCCCACCTTTAATTACC
GACCCCTGCTCGAAAACGCCTCGCCATGATGCAAAGGACAACGACGAGGA
CAACGACGGTGTCGCAAAGGCAGCGGGCCGGGGTAAGGCCGAAGCGGAGG
CGGGCGACACCGAGAAGGCGTCCGGGGCCAAACAGGAGGGGGGTGACAAC
AACAAGGACGACGAGGAGAAAGAATCGCGGACGGTGTTCGTGGGGAACTT
GCCGACCAGCTTCACGCCCAAGAAGGTCAAGGCCGCCTTCAAGGAGTACG
GCGCGGTGGAGTCGGTCCGGCTTCGCTCGGTTGCGGTGCAGGGGATGGCG
GTGGACAAGGCCGGGGATCAGGTACGGTATGTGTCCCGGCGTGGCGACGC
CAACATCTCCCATCTCGGGTTGTTCCAAGAGCAAAAATCCTTGGAATAAA
TCGATGCGGGTGTTCCCACGGTTTGGTCCATTTTTTTCTGTTGTCATTTT
TTTGTGTTATCCGTCTTCTTGCGGGTTTTTCGAGAACTCCGCAAGCTTGT
GGCGTGGTTGGTCTCACCGCCCTTGGCGTGCTTACGCTGTGCGCGTCGTG
GTCACGTCTCGGCACCAAAAATAACTGCTCGATTCGCGTGGTTTGATGTT
CGGGCTCTCTGCTGTGCTGTACGGTGGCGTTATTCTTTCGCAGCAACTGG
TGAGGAAGGTGTGCGTGAACAGGGGCATGGTGGACGAGGAGGTGAAGAGC
AGCGTCAACGCCTACGTGGTGTACAAGGACGGGGCCAGCGTGGAGAAGGT
GGGCTGCTGTAGTCATCGTCGCGTTGGAGGTGGTGGTGGTGGTGTGCTGT
CGTTTGCTGCTGACCGTCTAGTGCAGTGGATACCCTGATTGACACGATCG
AAGTGTCCGACACCGAACAGCCGCGTGACCCCTGCGGATTGGTCCCGTGC
GCTCCATGTGGAGCACACATATCCCTCAATAACCATCATGCGCGCGTCTA
GAGCGTCGTTGCGTCTACCATGGGTGAGAAGCGTCCGTTGCGAGTACATT
TACGGAGAAAAAAGGGGGGCCGTGCTGTTGCGCTCGGTCGTTCTTAGCGA
CAGTTGCCTTGCCGCTGCCGTCCGTCCAGGCCCTCGCTGCCAATGGCACA
GACGTGGGGGGCAAGCACGTCCGCGTGGACAGGGCCAAGAGCGGCGAGTA
CGACCACACTCGCTCGGTCTTCCTCGGCAACCTTCCCATGGACGCAGGGG
AGGAGGAGGTGAGACAAGCAGCAGCAGTAACGTGTATTCACATCGCGCAT
GTTGTTGGGGTCGTATTTTCGCACTCAGTTGTGACGACGACGGTTTCCCG
TGTGACCGGCACGGAAGGGAAGATACCGTGGGTTGCGGAAGATACCGCAC
AAGCTGGACCGGTTTTCGAAGCTACTATTAACTCCACGACAAGGAGAGGA
TGCCAAAATCAAACGTGATACGTTTTCGGAAAGATCTCGATGAGACTCTT
CCTGCGTCGCCGTTTTCGGTACCATCACAGTCCTTGCCGGAGGAAATAGT
GGAACTTTGAAATCGGTCTAGGGTGTGTGTGGTATCTTAGGCAAACTACG
GTATTCTCTGGGCAGCGATGGCCAGACCGGATTTTCAAGTACCGCACCAC
CTACGGTAGCCTCAGTCCCCACCAACCACCACCACAAGAAGATTCGCCGC
AATCGAGAAACCCGAACCATGCGCGGATCTGAAAGTACCTACGCGTAAAG
AGATGACATTCCGAAATTTCTTCAGCACGCGTCCAAGCAGTTTGTCTTTG
TTTGAAGTGGTATTTGGAGATAGCCGTGTGATGATGCGTACCCATGTTCT
TTTCGGCGTTGTGAGACGTTGAGGTATGAGGTGATGGCAAGAGTTGGTAA
TAGTTCTTGCGAGTAATGTGCCCTTCTGTTCAGTGCCCGATTGCGTCCGG
GTCGTGTTGGATCCTTGGTGCATGATGGGCGTGCAAGCCGATAGGAAAGC
TTGGTTGAACCAGAACAGAGAAAAACAGCAACAACATGTATCATCTGTTG
TCACATTGGTTCCGTACAGCCCGCGGCGATTGTATCGAACAGGATCAAAT
CACACTATCCTACAGCGTATAGGAAAAACCCTGATTTTCCTGCAGTAGAA
ACGCATCGCGTGTGGAAAAGAGCATGTTACGCACCAATGATTTTACCCCC
CTGGTAAACACTCATCACGTGCGCATCCCCACGTAGGTTCGAGAATTGTT
TGCGTCGAAGCTGGAGGGCGGGCCAAAGGCGGTGGAAGGGGTGAGACTCG
TTCGGGACAAGGCCACGTTGGTCGGGAAGGGCTTCGGGTACGTCCTGCTC
GCCGACAGGGCCCTGGCTGCTGCGGTGCGTACCTTCGACAACAGTTCACA
AATCAGCCTTTGACAATATGATGCACAACAAAGTGGCTCTGCTGTGGGTT
GTGCATGTTTGTACTACATTGGGGTGATGTTCATAAAATTGCTTGTAGAT
AGATGCACAAACTGTTTCCTCTTCTTGGATTTGCGGCGGTGGGTGCTACA
TGTGGGTGACGTTTGGTGCGATGTTTCAATGTTTCCCCCCCTTGGTTGCA
GTCTTTCTGTACGTGTATTTATTTCTCCTTAATTGCAAACGGGAGAGATT
GTGTTGCGTTTCGTGTTGGTCGCTGTCCTGGAGAGTTTGGGGTCCAACGC
TATAGTGTCCTTTGCGCTGAAATCGACTTCGGGTAGTCGGGTTCGGTTGC
TGCTTCTTCTCCCTTTCTCTCCGACAGGGGATAGAAGGGTAAGCTAGACA
GGTTGTTTTCCACTGCAGAAAAAGAAAGCGATGAGACGAGACCCTACACG
CTTCTGAAATACGTATAAGAAGCCCCAAGCGTTGGGTGTCGGTCACAGCC
GGGGGCACGCGTTTTGGTGTGCCCCACTCGTGTGTTCTGTTCGGCTCTGG
AGTGATTCCATTCTTGTCATGAACTACATGTAGCCGATCGACTTCATGCG
GCTAGTTGTTGGTAGAACAAGGAGGTTGCCTGTTTCTCGCTGTAAAGATG
GTTGAGGTCACCTCTCTGTAGATGCTTTTTGACATGGGTATCCCCTCTCC
CTCTTGTCTCTTTCCCCTCTCCTCGCTCTTTCTCTCTCTTTACCTCCCTC
CCTCCCCCCTTTTTCTCGCCGTATGAACGCGAGAGAGCAGGCGTTAGCCC
TCCAGGGCACGAAACTCAAAGGCCGGCCCCTTCGGGTGATGCCGTGCGGC
AAGAGGACCAAGGGGAGGGGCGGGGTCGCGAAGCCCGGGCTAGAG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig12103:252..4946-

>mRNA_Ecto-sp13_S_contig12103.1792.1 ID=mRNA_Ecto-sp13_S_contig12103.1792.1|Name=mRNA_Ecto-sp13_S_contig12103.1792.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1221bp|location=Sequence derived from alignment at Ecto-sp13_S_contig12103:252..4946- (Ectocarpus species13 EcNAP12_S_4_19m)
TCAAAGGTTGCTCGAATCACCAAGGAAGCCCGGGCACGGGAACGGAGGGA
GGAGGAAGAGGCAGCCAACTCTGGCAAGAAGAAGAACAAGAAGGCCAAGA
AGAGAGAAGAGGAAGAACAGGAAAACAGACGGAAGCTGGAAGCGGAGAAG
CGGTTACAGATCGCGGCGAAACGGACGGCCGCGCTCGCTGCCGCAGCTGA
AGCCGTCCGAGCGGGCGGTTCAGCGAAAAAGGTGATCCAGTCGGCATCTG
AGGAACTAGAGGAGGACGAGGAGGAGAAGGGAGAGGAGGAGGACGAGGAA
CAGGAACAGGATGGGGAGGAAGAGGAGGAGGAGGAAGAGGAGGAAGAGGA
GGAAGAGGAGGAGAGAGATTCTGACAGCGAACCGGAGAGCGTGATCGCTG
GTCAGGGCGGGGATAGCTCCGACGAGGACATGGACGATATGGACGAGGGA
GAGGAGAAGGACAACGACGAGGACAACGACGGTGTCGCAAAGGCAGCGGG
CCGGGGTAAGGCCGAAGCGGAGGCGGGCGACACCGAGAAGGCGTCCGGGG
CCAAACAGGAGGGGGGTGACAACAACAAGGACGACGAGGAGAAAGAATCG
CGGACGGTGTTCGTGGGGAACTTGCCGACCAGCTTCACGCCCAAGAAGGT
CAAGGCCGCCTTCAAGGAGTACGGCGCGGTGGAGTCGGTCCGGCTTCGCT
CGGTTGCGGTGCAGGGGATGGCGGTGGACAAGGCCGGGGATCAGCAACTG
GTGAGGAAGGTGTGCGTGAACAGGGGCATGGTGGACGAGGAGGTGAAGAG
CAGCGTCAACGCCTACGTGGTGTACAAGGACGGGGCCAGCGTGGAGAAGG
CCCTCGCTGCCAATGGCACAGACGTGGGGGGCAAGCACGTCCGCGTGGAC
AGGGCCAAGAGCGGCGAGTACGACCACACTCGCTCGGTCTTCCTCGGCAA
CCTTCCCATGGACGCAGGGGAGGAGGAGGTTCGAGAATTGTTTGCGTCGA
AGCTGGAGGGCGGGCCAAAGGCGGTGGAAGGGGTGAGACTCGTTCGGGAC
AAGGCCACGTTGGTCGGGAAGGGCTTCGGGTACGTCCTGCTCGCCGACAG
GGCCCTGGCTGCTGCGGCGTTAGCCCTCCAGGGCACGAAACTCAAAGGCC
GGCCCCTTCGGGTGATGCCGTGCGGCAAGAGGACCAAGGGGAGGGGCGGG
GTCGCGAAGCCCGGGCTAGAG
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