mRNA_Ecto-sp13_S_contig1210.1787.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1210.1787.1 vs. uniprot
Match: D7FN44_ECTSI (Outer row dynein assembly protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN44_ECTSI) HSP 1 Score: 658 bits (1698), Expect = 3.570e-230 Identity = 410/548 (74.82%), Postives = 426/548 (77.74%), Query Frame = 2
Query: 35 MDLTKALLKKICRDSGLYSSPSLNDKLYLHYKGIRQIQNLEEYTGLRVLWLEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDSFLEASGSSSSALLDTLNLSKNFVRRVENISHLGRLTTLLLANNHLETADDLRQVLQCPSLQTLDVQHNRINDPDVVDIVSAMHDLRVLYLQGNPVVKCIRHYRKTLVSKCATLKYLDDRPVFDDERRRCTAWSKGMTEGGISRAQEAEREEMAKIRESKRAAEQRQYLAFEQASLSLNRRYKKIHFQMMREGLEARKQAKPQSESSSKNAQASETSGQPEPPVVNDGIKVSISTAVQGQESPLGDTLNEHCEVSNTGSSVSGDGIFGRQEILPLPP-PPPN--------QMHPRGQQKSMVSNTMEERNTRVPRLVNEFSGEDIIPFSDCETVRNARKSRAARILAPSTSTHRAPSSDATDFPEGSGIRRSPGLDRVEPLDDDVCDLKKLSNDVDEEIRAFEAESQRXXXXXXXXXXXXXXXXTAKEQEVVQVGCNGNVKVTSKEHVAELYQEQATNFEELD 1651
MDLTKA+LKKICRDSGLYSSPSLNDKLYLHYKGIRQIQNLEEYTGLRVLWLEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX DSFLE TLDVQHNRINDPDVVDIVSAMHDLRVLYLQGNPVVK IRHYRKTLVSKCATLKYLDDRPVFDDER RC AWSKGM EGGISRAQEAEREEMAKIRESKRAAEQRQYLAFEQ MMREGLEA+KQAKPQ ES S+NA+ SE SGQPEPPVVND +VSIST +GQESPL DT NEHCEV NTGSS+ GDG G+QE LPLPP PPP QM+PRGQQKSMVSNTMEERNTRVPRLVNEFSGEDIIPF+DCETVRNAR+SRAARILAPSTSTHRAPSSDATD PEGSGIRRSPGLD VEPLDDDV DL KLSNDVDEEIRAFEAESQR XXXXXT K+QEVV+VGC+GNV+VT +EHVAE QEQATNFEELD
Sbjct: 1 MDLTKAVLKKICRDSGLYSSPSLNDKLYLHYKGIRQIQNLEEYTGLRVLWLEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSFLE----------------------------------------------------------TLDVQHNRINDPDVVDIVSAMHDLRVLYLQGNPVVKSIRHYRKTLVSKCATLKYLDDRPVFDDERCRCAAWSKGMAEGGISRAQEAEREEMAKIRESKRAAEQRQYLAFEQ---------------MMREGLEAKKQAKPQHESLSENAEESEASGQPEPPVVNDSSQVSISTVQEGQESPLCDTSNEHCEVGNTGSSIGGDGTSGQQETLPLPPLPPPQNVVLGAIVQMNPRGQQKSMVSNTMEERNTRVPRLVNEFSGEDIIPFTDCETVRNARQSRAARILAPSTSTHRAPSSDATDSPEGSGIRRSPGLDHVEPLDDDVFDLTKLSNDVDEEIRAFEAESQRLREERILQNTPXXXXXTVKKQEVVEVGCDGNVEVTYQEHVAEFCQEQATNFEELD 475
BLAST of mRNA_Ecto-sp13_S_contig1210.1787.1 vs. uniprot
Match: A0A7S3Y6C6_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y6C6_HETAK) HSP 1 Score: 199 bits (505), Expect = 5.380e-54 Identity = 151/309 (48.87%), Postives = 183/309 (59.22%), Query Frame = 2
Query: 35 MDLTKALLKKICRDSGLYSSPSLNDKLYLHYKGIRQIQNLEEYTGLRVLWLEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDSFLEASGSSSSALLDTLNLSKNFVRRVENISHLGRLTTLLLANNHLETADDLRQVLQCPSLQTLDVQHNRINDPDVVDIVSAMHDLRVLYLQGNPVVKCIRHYRKTLVSKCATLKYLDDRPVFDDERRRCTAWSKGMTEGG-ISRAQEAEREEMAKIRESKRAAEQRQYLAFEQASLSLNRRYKKIHFQMMREGLEARKQAKPQSESSSKNAQASETSGQPEPP 958
M++TK LKK+CRD+ Y P LNDKLYLHYKG R IQNL+EY L+V+WLEG XXXXXXXXXXXXXXXXXXXXXXXXXX TAD VL+ PSL+TLD+QHN+I+D +VD+V+ M +LRVLYLQGNPVVK +RHYRK+LVS C L+YLDDRPVF+DERRR AW++G GG + A AEREE+ ++RE KR AE+R +LA EQ MMREG E R + ++ A +G P PP
Sbjct: 11 MEITKPYLKKLCRDNDGYGVPELNDKLYLHYKGFRCIQNLDEYINLKVIWLEGNGLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------XXXXXXXXXXXXXXTADXXXXVLEVPSLETLDIQHNKIDDVGIVDVVTTMPNLRVLYLQGNPVVKDVRHYRKSLVSGCRELRYLDDRPVFEDERRRTDAWARGFRAGGTLDAANAAEREEIRRVREEKRCAEERNFLAMEQ---------------MMREGAELRLMRGEEERQRAEEQAACAAAGLPSPP 295
BLAST of mRNA_Ecto-sp13_S_contig1210.1787.1 vs. uniprot
Match: K3WU80_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WU80_GLOUD) HSP 1 Score: 172 bits (436), Expect = 3.270e-44 Identity = 134/268 (50.00%), Postives = 164/268 (61.19%), Query Frame = 2
Query: 35 MDLTKALLKKICRDSGLYSSPSLNDKLYLHYKGIRQIQNLEEYTGLRVLWLEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDSFLEASGSSSSALLDTLNLSKNFVRRVENISHLGRLTTLLLANNHLETADDLRQVLQCPSLQTLDVQHNRINDPDVVDIVSAMHDLRVLYLQGNPVVKCIRHYRKTLVSKCATLKYLDDRPVFDDERRRCTAWSKGM--TEGGISRAQEAEREEMAKIRESKRAAEQRQYLAFEQASLSLNRR 832
+++ K LLKK+CRD LY +PS+NDKLYLHYKG R I+NL+EYTGL+VLWLEG XXXXXXXXXXXXXXXXXXXXXXXXXXXXX L P+L LD+Q NR+ D ++VDI++ M +L+VLYLQGN VVK I+ YRKTLV +C LKYLDDRPVFDDERRR AW K + ++G AQEAER+EM IR K+ ++ +L FEQ + R+
Sbjct: 2 VEMEKPLLKKLCRDMDLYVTPSINDKLYLHYKGFRTIKNLDEYTGLKVLWLEGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------XXXXXXXXXXXXXXXXXXXXXXLTLPNLSVLDIQSNRVTDVNIVDILAQMPELKVLYLQGNDVVKHIKQYRKTLVYRCRKLKYLDDRPVFDDERRRVEAWGKALDASQGDYKAAQEAERDEMDAIRREKKERDELNFLHFEQMMIEGRRK 260
BLAST of mRNA_Ecto-sp13_S_contig1210.1787.1 vs. uniprot
Match: T0QTZ5_SAPDV (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=T0QTZ5_SAPDV) HSP 1 Score: 172 bits (437), Expect = 7.590e-44 Identity = 134/259 (51.74%), Postives = 165/259 (63.71%), Query Frame = 2
Query: 35 MDLTKALLKKICRDSGLYSSPSLNDKLYLHYKGIRQIQNLEEYTGLRVLWLEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDSFLEASGSSSSALLDTLNLSKNFVRRVENISHLGRLTTLLLANNHLETADDLRQVLQCPSLQTLDVQHNRINDPDVVDIVSAMHDLRVLYLQGNPVVKCIRHYRKTLVSKCATLKYLDDRPVFDDERRRCTAWSKGM--TEGGISRAQEAEREEMAKIRESKRAAEQRQYLAFE 805
+++ K L+KIC+D LYS+PS+ND+LYLHYKG R+I+NLE YT L+VLWLEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX VL+ P+L LD+Q NRI D DVVDI++AM +LRVLYLQGN VVK I+HYRKT++S+C L+YLDDRPVFD+ERRR TAW + M T G + A EAER E+A IR+ K+ ++ + FE
Sbjct: 2 LEMNKESLRKICKDLDLYSTPSINDRLYLHYKGFRRIENLEAYTELKVLWLEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------XXXXXXXXXXXXXXXXXXXXXVLELPTLAVLDIQSNRIADVDVVDILAAMPNLRVLYLQGNDVVKHIKHYRKTIISRCKELRYLDDRPVFDEERRRVTAWGRVMEETNGDVDAALEAERAELALIRQEKKDKDEANFRYFE 251
BLAST of mRNA_Ecto-sp13_S_contig1210.1787.1 vs. uniprot
Match: A0A8K1CJQ4_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CJQ4_PYTOL) HSP 1 Score: 174 bits (440), Expect = 1.310e-43 Identity = 131/260 (50.38%), Postives = 159/260 (61.15%), Query Frame = 2
Query: 35 MDLTKALLKKICRDSGLYSSPSLNDKLYLHYKGIRQIQNLEEYTGLRVLWLEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDSFLEASGSSSSALLDTLNLSKNFVRRVENISHLGRLTTLLLANNHLETADDLRQVLQCPSLQTLDVQHNRINDPDVVDIVSAMHDLRVLYLQGNPVVKCIRHYRKTLVSKCATLKYLDDRPVFDDERRRCTAWSKGM--TEGGISRAQEAEREEMAKIRESKRAAEQRQYLAFEQ 808
+++ KA LKK+CRD LY +PS+NDKLYLHYKG R I+NLEEYTGL+VLWLEG XXXXXXXXXXXXXXXXXXXXXXXXXXX VL P L LD+Q NRINDP +++I++ M L+VLYLQGN VVK I+ YRKT++ +C LKYLDDRPVFD+ERRR AW + + G AQEAEREEM +IR+ KR + + +L FE+
Sbjct: 2 VEMEKAFLKKLCRDHDLYVTPSINDKLYLHYKGFRCIKNLEEYTGLKVLWLEGNGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------XXXXXXXXXXXXXXXXXXXXXVLTLPKLAVLDIQSNRINDPKILEILAEMPSLKVLYLQGNDVVKHIKQYRKTMIYRCRKLKYLDDRPVFDEERRRVEAWGQALEAANGDYKAAQEAEREEMDRIRQEKRDRDHQNFLMFEE 252
BLAST of mRNA_Ecto-sp13_S_contig1210.1787.1 vs. uniprot
Match: A0A482SU75_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SU75_9ARCH) HSP 1 Score: 172 bits (436), Expect = 1.700e-43 Identity = 126/234 (53.85%), Postives = 153/234 (65.38%), Query Frame = 2
Query: 38 DLTKALLKKICRDSGLYSSPSLNDKLYLHYKGIRQIQNLEEYTGLRVLWLEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDSFLEASGSSSSALLDTLNLSKNFVRRVENISHLGRLTTLLLANNHLETADDLRQVLQCPSLQTLDVQHNRINDPDVVDIVSAMHDLRVLYLQGNPVVKCIRHYRKTLVSKCATLKYLDDRPVFDDERRRCTAWSKGMTEGGIS-RAQEAE 736
++TK +L+K+C+++GLY++PS+NDKLYLHYKG IQNL+ YTGL+ LWLEG XXXXXXXXXXXXXXXXXXXXXXXXXXXXX VL PSLQTLD+QHN+I+DP ++DIV+ + DLRVLYL GNPVVK IR+YRKTL+++C LKYLDDRPVF+DERRR AW+K + GG AQEAE
Sbjct: 3 EMTKEVLRKLCKENGLYTTPSINDKLYLHYKGFHVIQNLDSYTGLKALWLEGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------XXXXXXXXXXXXXXXXXXXXXVLDLPSLQTLDLQHNKIDDPAIIDIVAQIPDLRVLYLMGNPVVKSIRNYRKTLIARCKLLKYLDDRPVFEDERRRVDAWAKVLDNGGTQDEAQEAE 227
BLAST of mRNA_Ecto-sp13_S_contig1210.1787.1 vs. uniprot
Match: A0A024TEQ5_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TEQ5_9STRA) HSP 1 Score: 171 bits (433), Expect = 3.300e-43 Identity = 132/260 (50.77%), Postives = 165/260 (63.46%), Query Frame = 2
Query: 35 MDLTKALLKKICRDSGLYSSPSLNDKLYLHYKGIRQIQNLEEYTGLRVLWLEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDSFLEASGSSSSALLDTLNLSKNFVRRVENISHLGRLTTLLLANNHLETADDLRQVLQCPSLQTLDVQHNRINDPDVVDIVSAMHDLRVLYLQGNPVVKCIRHYRKTLVSKCATLKYLDDRPVFDDERRRCTAWSKGM--TEGGISRAQEAEREEMAKIRESKRAAEQRQYLAFEQ 808
M++ KA L+KIC+D LYS+PS+ND+LYLHYKG R+I+NLEEYT ++V+WLEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX LQ PSL LD+Q NRI DP V+DI++ M +LRVLYLQGN VVK I+ YRKT+V++C L+YLDDRPVFDDERRR AW K + T G + A +AER+E+A IR+ K+ ++ + FE+
Sbjct: 1 MEMNKATLRKICKDLDLYSTPSINDRLYLHYKGFRRIENLEEYTNVKVIWLEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------XXXXXXXXXXXXXXXXXXXXXXLQIPSLSVLDIQSNRIADPAVLDILAQMPNLRVLYLQGNDVVKHIKQYRKTVVARCKNLRYLDDRPVFDDERRRVNAWYKALEETNGDMEAALQAERDELAVIRQEKKDKDEANFRYFEE 251
BLAST of mRNA_Ecto-sp13_S_contig1210.1787.1 vs. uniprot
Match: A0A3L6V2M5_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3L6V2M5_9STRA) HSP 1 Score: 164 bits (414), Expect = 3.010e-42 Identity = 129/258 (50.00%), Postives = 161/258 (62.40%), Query Frame = 2
Query: 41 LTKALLKKICRDSGLYSSPSLNDKLYLHYKGIRQIQNLEEYTGLRVLWLEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDSFLEASGSSSSALLDTLNLSKNFVRRVENISHLGRLTTLLLANNHLETADDLRQVLQCPSLQTLDVQHNRINDPDVVDIVSAMHDLRVLYLQGNPVVKCIRHYRKTLVSKCATLKYLDDRPVFDDERRRCTAWSKGM--TEGGISRAQEAEREEMAKIRESKRAAEQRQYLAFEQ 808
+ KA L+KIC+D LYS+PS+ND+LYLHYKG R+I+NLEEYT ++V+WLEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX PSL LD+Q NRI DP VVD+++ M +LRVLYLQGN VVK I+ YRKT+V++C L+YLDDRPVFDDERRR AW K + T G + A +AER+E+A IR+ K+ ++ + FE+
Sbjct: 1 MNKATLRKICKDLDLYSTPSINDRLYLHYKGFRRIENLEEYTNVKVIWLEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------XXXXXXXXXXXXXXXXXXXXXXXXXPSLSVLDIQSNRIADPAVVDVLAQMPNLRVLYLQGNDVVKHIKQYRKTVVARCKNLRYLDDRPVFDDERRRVNAWYKVLENTNGDMDAALQAERDELAVIRQEKKDKDEANFRYFEE 249
BLAST of mRNA_Ecto-sp13_S_contig1210.1787.1 vs. uniprot
Match: A0A1V9YZD4_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YZD4_9STRA) HSP 1 Score: 164 bits (416), Expect = 5.470e-41 Identity = 128/260 (49.23%), Postives = 163/260 (62.69%), Query Frame = 2
Query: 35 MDLTKALLKKICRDSGLYSSPSLNDKLYLHYKGIRQIQNLEEYTGLRVLWLEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDSFLEASGSSSSALLDTLNLSKNFVRRVENISHLGRLTTLLLANNHLETADDLRQVLQCPSLQTLDVQHNRINDPDVVDIVSAMHDLRVLYLQGNPVVKCIRHYRKTLVSKCATLKYLDDRPVFDDERRRCTAWSKGM--TEGGISRAQEAEREEMAKIRESKRAAEQRQYLAFEQ 808
+++ K L+KIC++ LY++P++ND+LYLHYKG R+IQNLE+YT L+VLWLEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX L+ PSL LD+Q NRIND VVD+++ M +LRVLYLQGN VVK I+ YRKT++ +C L+YLDDRPVFD+ERRR TAW + M T G + A EAER E+A IR+ K+ ++ + FE+
Sbjct: 2 LEMNKESLRKICKELDLYTTPNINDRLYLHYKGFRRIQNLEDYTELKVLWLEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------XXXXXXXXXXXXXXXXXXXXXXLEIPSLAVLDIQSNRINDATVVDVLAQMTNLRVLYLQGNDVVKHIKQYRKTIIYRCKELRYLDDRPVFDEERRRVTAWGRAMEETNGDLEAALEAERAELAVIRQEKKDKDEANFRYFEE 252
BLAST of mRNA_Ecto-sp13_S_contig1210.1787.1 vs. uniprot
Match: A0A3B3VLG0_9TELE (Dynein axonemal assembly factor 1 n=1 Tax=Poecilia latipinna TaxID=48699 RepID=A0A3B3VLG0_9TELE) HSP 1 Score: 159 bits (403), Expect = 6.820e-41 Identity = 84/215 (39.07%), Postives = 124/215 (57.67%), Query Frame = 2
Query: 41 LTKALLKKICRDSGLYSSPSLNDKLYLHYKGIRQIQNLEEYTGLRVLWLEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDSFLEASGSSSSALLDTLNLSKNFVRRVENISHLGRLTTLLLANNHLETADDLRQVLQCPSLQTLDVQHNRINDPDVVDIVSAMHDLRVLYLQGNPVVKCIRHYRKTLVSKCATLKYLDDRPVFDDERRRCTA 685
+TK LK +C+ + LYS+P LND LYLH+KG +I+NLEEYTGL+ LWLE L+ L TLN+S N+++ + IS L L+TL +++N LE+A D+ + +C ++ LD+ HN ++DP++V ++ AM +LRVL L GN VV+ I +YRKT++ L +LDDRPVF +R C+A
Sbjct: 35 MTKKFLKDLCKKNKLYSTPCLNDTLYLHFKGFSKIENLEEYTGLKCLWLESNGLQRIEN--------------------------LDLENLEPMKKLCTLNVSNNYIQMIXXISCLPELSTLQISHNKLESAKDVEHLSECMAINVLDLSHNLLHDPEIVSVLEAMPELRVLNLMGNEVVRKIPNYRKTMIIHLKQLTFLDDRPVFPKDRPLCSA 223 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1210.1787.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1210.1787.1 >prot_Ecto-sp13_S_contig1210.1787.1 ID=prot_Ecto-sp13_S_contig1210.1787.1|Name=mRNA_Ecto-sp13_S_contig1210.1787.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=540bp MDLTKALLKKICRDSGLYSSPSLNDKLYLHYKGIRQIQNLEEYTGLRVLWback to top mRNA from alignment at Ecto-sp13_S_contig1210:3754..8130+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1210.1787.1 ID=mRNA_Ecto-sp13_S_contig1210.1787.1|Name=mRNA_Ecto-sp13_S_contig1210.1787.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4377bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1210:3754..8130+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1210:3754..8130+ >mRNA_Ecto-sp13_S_contig1210.1787.1 ID=mRNA_Ecto-sp13_S_contig1210.1787.1|Name=mRNA_Ecto-sp13_S_contig1210.1787.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1620bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1210:3754..8130+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |