mRNA_Ecto-sp13_S_contig12094.1778.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig12094.1778.1
Unique NamemRNA_Ecto-sp13_S_contig12094.1778.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig12094.1778.1 vs. uniprot
Match: D8LBC2_ECTSI (Hydrolase_4 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBC2_ECTSI)

HSP 1 Score: 446 bits (1148), Expect = 3.460e-158
Identity = 214/215 (99.53%), Postives = 215/215 (100.00%), Query Frame = 1 
Query:    1 RSSQITILFSHGNAEDLGLIYEWFYDFSRQLNVNVLAYEYSGYGKSEGTVSEDNCYADIRAAYDYLTTQKKTPPKQIVLYGRSLGSGPTCQLAEELAAAGVELGGVMLQSPLASAFRVAFNFRFTMPGDMFPNIDRVKGVACPMFIIHGTRDEVVPFWHGQELFLGTPTKWRAKPFWVDGAGHNNIEALLREDGTLFERMNDFLDKWVRNDLSAD 645
            RSSQITILFSHGNAEDLGLIYEWFYDFSRQLNVNVLAYEYSGYGKSEGTVSEDNCYADIRAAYDYLTTQKKTPPKQIVLYGRSLGSGPTCQLA+ELAAAGVELGGVMLQSPLASAFRVAFNFRFTMPGDMFPNIDRVKGVACPMFIIHGTRDEVVPFWHGQELFLGTPTKWRAKPFWVDGAGHNNIEALLREDGTLFERMNDFLDKWVRNDLSAD
Sbjct:   41 RSSQITILFSHGNAEDLGLIYEWFYDFSRQLNVNVLAYEYSGYGKSEGTVSEDNCYADIRAAYDYLTTQKKTPPKQIVLYGRSLGSGPTCQLAQELAAAGVELGGVMLQSPLASAFRVAFNFRFTMPGDMFPNIDRVKGVACPMFIIHGTRDEVVPFWHGQELFLGTPTKWRAKPFWVDGAGHNNIEALLREDGTLFERMNDFLDKWVRNDLSAD 255
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BLAST of mRNA_Ecto-sp13_S_contig12094.1778.1 vs. uniprot
Match: A0A7S2XW06_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XW06_9STRA)

HSP 1 Score: 338 bits (866), Expect = 3.030e-115
Identity = 153/207 (73.91%), Postives = 181/207 (87.44%), Query Frame = 1 
Query:    1 RSSQITILFSHGNAEDLGLIYEWFYDFSRQLNVNVLAYEYSGYGKSEGTVSEDNCYADIRAAYDYLTTQKKTPPKQIVLYGRSLGSGPTCQLAEELAAAGVELGGVMLQSPLASAFRVAFNFRFTMPGDMFPNIDRVKGVACPMFIIHGTRDEVVPFWHGQELFLGTPTKWRAKPFWVDGAGHNNIEALLREDGTLFERMNDFLDKW 621
            R++ +TILFSHGNAEDLG+IY+WFYDFSRQL+VNVLAY+Y+GYGKS G  SE+NC+ADI AAY +L   +   PKQIVLYGRSLGSG TC +AE+L+  G +L GV+LQSPL SA+RVAFNFRFT+PGDMF NIDR+  + CP+FI+HGTRDEVVPFWHGQELFLG  TKWRAKPFWVDGAGHNNIEALLR+DG+ FER+N+FLD+W
Sbjct:   41 RNAHLTILFSHGNAEDLGMIYDWFYDFSRQLSVNVLAYDYTGYGKSTGYQSEENCHADIEAAYRHLIEARNLKPKQIVLYGRSLGSGATCYMAEKLSREGTQLAGVILQSPLLSAYRVAFNFRFTLPGDMFANIDRINNIECPVFIVHGTRDEVVPFWHGQELFLGCMTKWRAKPFWVDGAGHNNIEALLRDDGSFFERINEFLDEW 247
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BLAST of mRNA_Ecto-sp13_S_contig12094.1778.1 vs. uniprot
Match: A0A7S4D485_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D485_HETAK)

HSP 1 Score: 338 bits (866), Expect = 3.720e-115
Identity = 154/208 (74.04%), Postives = 180/208 (86.54%), Query Frame = 1 
Query:    1 RSSQITILFSHGNAEDLGLIYEWFYDFSRQLNVNVLAYEYSGYGKSEGT-VSEDNCYADIRAAYDYLTTQKKTPPKQIVLYGRSLGSGPTCQLAEELAAAGVELGGVMLQSPLASAFRVAFNFRFTMPGDMFPNIDRVKGVACPMFIIHGTRDEVVPFWHGQELFLGTPTKWRAKPFWVDGAGHNNIEALLREDGTLFERMNDFLDKW 621
            R++ +TILFSHGNAEDLG+IY+WFYDFSRQLNVNV+AY+Y+GYGKS G   +E+NCYAD+ AAY  L       PKQI+LYGRSLGSGPTC LA +LA  G +LGG++LQSPL SA+RVAFNFRFTMPGDMFPNID++  + CP+FIIHGTRDEVVPFWHGQELFL   TKWRAKPFWVDGAGHNNIEALLR+DG+ FER+N+FLD+W
Sbjct:   41 RNASLTILFSHGNAEDLGMIYDWFYDFSRQLNVNVMAYDYTGYGKSSGAGPAEENCYADVEAAYRRLVEVHHMQPKQIILYGRSLGSGPTCHLARKLAKEGTQLGGIILQSPLLSAYRVAFNFRFTMPGDMFPNIDKMPDIECPVFIIHGTRDEVVPFWHGQELFLACKTKWRAKPFWVDGAGHNNIEALLRDDGSFFERINEFLDEW 248
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BLAST of mRNA_Ecto-sp13_S_contig12094.1778.1 vs. uniprot
Match: A0A6V2X8D4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2X8D4_HETAK)

HSP 1 Score: 327 bits (838), Expect = 7.260e-111
Identity = 153/209 (73.21%), Postives = 177/209 (84.69%), Query Frame = 1 
Query:    1 RSSQITILFSHGNAEDLGLIYEWFYDFSRQLNVNVLAYEYSGYGKSEGTV--SEDNCYADIRAAYDYLTTQKKTPPKQIVLYGRSLGSGPTCQLAEELAAAGVELGGVMLQSPLASAFRVAFNFRFTMPGDMFPNIDRVKGVACPMFIIHGTRDEVVPFWHGQELFLGTPTKWRAKPFWVDGAGHNNIEALLREDGTLFERMNDFLDKW 621
            R++ ITILFSHGNAEDLG+IY+WFYDFSRQLNVNVLAY+Y+GYGK+ G    SE + YAD  AA  +L   +  PP ++VLYGRSLGSGPTC LA +LA  G  LGGV+LQSPL SA+RVAFNFRFTMPGDMFPNID++  + CP+FIIHGTRDEVVPFWHGQELFL   TKWRAKPFWVDGAGHNNIEALLR+DG+ FER+N+FLD+W
Sbjct:   41 RNAHITILFSHGNAEDLGMIYDWFYDFSRQLNVNVLAYDYTGYGKAAGGAAPSEAHVYADAEAALRHLREARGVPPHRVVLYGRSLGSGPTCHLARKLAREGTLLGGVILQSPLMSAYRVAFNFRFTMPGDMFPNIDKMPDIECPVFIIHGTRDEVVPFWHGQELFLACKTKWRAKPFWVDGAGHNNIEALLRDDGSFFERINEFLDEW 249
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BLAST of mRNA_Ecto-sp13_S_contig12094.1778.1 vs. uniprot
Match: A0A836C9A1_9STRA (Alpha/Beta hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9A1_9STRA)

HSP 1 Score: 325 bits (833), Expect = 3.530e-110
Identity = 148/214 (69.16%), Postives = 178/214 (83.18%), Query Frame = 1 
Query:    1 RSSQITILFSHGNAEDLGLIYEWFYDFSRQLNVNVLAYEYSGYGKSEGTVSEDNCYADIRAAYDYLTTQKKTPPKQIVLYGRSLGSGPTCQLAEELAAAGVELGGVMLQSPLASAFRVAFNFRFTMPGDMFPNIDRVKGVACPMFIIHGTRDEVVPFWHGQELFLGTPTKWRAKPFWVDGAGHNNIEALLREDGTLFERMNDFLDKWVRNDLSA 642
            RSS IT+LFSHGNAEDLG+IY+WF+DFSR + VNVLAY+Y+GYGK+ G VSE+NCYADI AAY++LT   +   ++IVLYGRSLGSGPTC LAE+L+ +G +LGGV+LQSPL SAFRVAFNFRFT+PGDMFPN+DR+  + CP++IIHGTRDE+VPFWHGQELF    TK R KPFWVDGAGHNNIEALLREDG  F  +  FLD++   +  A
Sbjct:   41 RSSTITVLFSHGNAEDLGMIYDWFHDFSRLVKVNVLAYDYTGYGKASGEVSEENCYADIDAAYEHLTVDHQIASERIVLYGRSLGSGPTCYLAEKLSRSGTKLGGVILQSPLCSAFRVAFNFRFTLPGDMFPNVDRISNIECPIYIIHGTRDEIVPFWHGQELFFAAQTKHRVKPFWVDGAGHNNIEALLREDGAFFTAIGKFLDEYTDRNRGA 254
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BLAST of mRNA_Ecto-sp13_S_contig12094.1778.1 vs. uniprot
Match: A0A7S3DWQ1_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S3DWQ1_9STRA)

HSP 1 Score: 301 bits (772), Expect = 1.270e-100
Identity = 137/207 (66.18%), Postives = 168/207 (81.16%), Query Frame = 1 
Query:    4 SSQITILFSHGNAEDLGLIYEWFYDFSRQLNVNVLAYEYSGYGKSEGTVSEDNCYADIRAAYDYLTTQKKTPPKQIVLYGRSLGSGPTCQLAEELAAAGVELGGVMLQSPLASAFRVAFNFRFTMPGDMFPNIDRVKGVACPMFIIHGTRDEVVPFWHGQELFLGTPTKWRAKPFWVDGAGHNNIEALLREDGTLFERMNDFLDKWV 624
            ++ +TILFSHGNAEDLG+IY+WF D +R L VN++AY+Y+GYGKS G+ SEDNCY+DI AA+ YLT  ++  P+QIVLYGRSLGSGP+C LA + A AG  +GGV+LQSPL SA+RVAFNFRFTM GD FPNID    +ACP+FIIHGT+DEVVPFWHG++LFL  P  WRAKPFWV+GAGHNNIEA+LR  G    ++ +FLD  V
Sbjct:   43 AATVTILFSHGNAEDLGMIYDWFNDLARVLRVNIMAYDYTGYGKSNGSPSEDNCYSDIDAAFKYLTEVRRIQPEQIVLYGRSLGSGPSCYLASKTATAGRSVGGVILQSPLLSAYRVAFNFRFTMVGDRFPNIDYAPSIACPVFIIHGTQDEVVPFWHGEDLFLALPQSWRAKPFWVEGAGHNNIEAMLRPSGAFISKLIEFLDLHV 249
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BLAST of mRNA_Ecto-sp13_S_contig12094.1778.1 vs. uniprot
Match: A0A7S3LGM2_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LGM2_9STRA)

HSP 1 Score: 300 bits (767), Expect = 7.280e-100
Identity = 135/206 (65.53%), Postives = 167/206 (81.07%), Query Frame = 1 
Query:    7 SQITILFSHGNAEDLGLIYEWFYDFSRQLNVNVLAYEYSGYGKSEGTVSEDNCYADIRAAYDYLTTQKKTPPKQIVLYGRSLGSGPTCQLAEELAAAGVELGGVMLQSPLASAFRVAFNFRFTMPGDMFPNIDRVKGVACPMFIIHGTRDEVVPFWHGQELFLGTPTKWRAKPFWVDGAGHNNIEALLREDGTLFERMNDFLDKWV 624
            + +T+LFSHGNAEDLG+IY+WF D +R L VN++AY+Y+GYGKS GT +EDNCYADI AAY YLT  ++  P+QIVLYGRSLGSGP+C LA + A AG  +GGV+LQSPL SA+RVAFNFRFTM GD FPNID    + CP+FI+HGT+DEVVPFWHG+ELFL  P +WRAKPFWV+GAGHNNIEA+LR  G    ++ ++L+  V
Sbjct:   44 AMVTLLFSHGNAEDLGMIYDWFNDLARVLRVNIMAYDYTGYGKSTGTPTEDNCYADIEAAYKYLTEVRRIQPEQIVLYGRSLGSGPSCYLASKTATAGRSVGGVILQSPLLSAYRVAFNFRFTMVGDRFPNIDYAPAIRCPVFIVHGTQDEVVPFWHGEELFLALPQEWRAKPFWVEGAGHNNIEAMLRPTGMFIAKLVEYLELHV 249
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BLAST of mRNA_Ecto-sp13_S_contig12094.1778.1 vs. uniprot
Match: B7G294_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G294_PHATC)

HSP 1 Score: 296 bits (757), Expect = 2.410e-98
Identity = 135/207 (65.22%), Postives = 165/207 (79.71%), Query Frame = 1 
Query:    4 SSQITILFSHGNAEDLGLIYEWFYDFSRQLNVNVLAYEYSGYGKSEGTVSEDNCYADIRAAYDYLTTQKKTPPKQIVLYGRSLGSGPTCQLAEELAAAGVELGGVMLQSPLASAFRVAFNFRFTMPGDMFPNIDRVKGVACPMFIIHGTRDEVVPFWHGQELFLGTPTKWRAKPFWVDGAGHNNIEALLREDGTLFERMNDFLDKWV 624
            ++ +TILFSHGNAEDLG+IY+WF D +R L VN++AY+Y+GYGKS G  SE+ CY DI AAY YLT  ++  P+Q+VLYGRSLGSGP+C LA + A  G  +GGV+LQSPL SA+RVAFNFRFTM GD FPNID    +ACP+FI+HGT+DEVVPFWHGQ+LFL    +WRAKPFWVDGAGHNNIEA+LR  GT   ++ +FLD  V
Sbjct:   43 NASVTILFSHGNAEDLGMIYDWFNDLARVLRVNIMAYDYTGYGKSNGHPSEEQCYQDIEAAYRYLTEVRRLQPEQVVLYGRSLGSGPSCYLASKTAKEGRSVGGVILQSPLLSAYRVAFNFRFTMVGDKFPNIDFASKIACPVFIVHGTQDEVVPFWHGQDLFLALKQEWRAKPFWVDGAGHNNIEAMLRSTGTFVAKLMEFLDLHV 249
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BLAST of mRNA_Ecto-sp13_S_contig12094.1778.1 vs. uniprot
Match: A0A7S4EKU0_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4EKU0_9STRA)

HSP 1 Score: 295 bits (756), Expect = 3.530e-98
Identity = 132/204 (64.71%), Postives = 167/204 (81.86%), Query Frame = 1 
Query:    4 SSQITILFSHGNAEDLGLIYEWFYDFSRQLNVNVLAYEYSGYGKSEGTVSEDNCYADIRAAYDYLTTQKKTPPKQIVLYGRSLGSGPTCQLAEELAAAGVELGGVMLQSPLASAFRVAFNFRFTMPGDMFPNIDRVKGVACPMFIIHGTRDEVVPFWHGQELFLGTPTKWRAKPFWVDGAGHNNIEALLREDGTLFERMNDFLD 615
            ++Q+TILFSHGNAEDLG+IY+WF D +R L VN++AY+Y+GYGKS G+ SE+NCYADI +AY YL   +   P+QIVLYGRSLGSGP+C LA + A  G  +GGV+LQSPL SA+RVAF+FRFTM GD FPNID+   + CP+FI+HGT+DEVVPFWHG++LF+  P +WRAKPFWV+GAGHNNIEALLR  G   +++ +FLD
Sbjct:   43 NAQVTILFSHGNAEDLGMIYDWFNDLARVLRVNIMAYDYTGYGKSNGSPSEENCYADIESAYQYLLEVRGLQPEQIVLYGRSLGSGPSCYLASKTAREGQSVGGVILQSPLLSAYRVAFDFRFTMAGDKFPNIDKAPFIKCPVFIVHGTQDEVVPFWHGEDLFMALPQQWRAKPFWVEGAGHNNIEALLRPTGAFVDKVVEFLD 246
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BLAST of mRNA_Ecto-sp13_S_contig12094.1778.1 vs. uniprot
Match: A0A1E7FBT1_9STRA (Alpha/beta-hydrolase n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FBT1_9STRA)

HSP 1 Score: 295 bits (756), Expect = 3.530e-98
Identity = 133/204 (65.20%), Postives = 167/204 (81.86%), Query Frame = 1 
Query:    4 SSQITILFSHGNAEDLGLIYEWFYDFSRQLNVNVLAYEYSGYGKSEGTVSEDNCYADIRAAYDYLTTQKKTPPKQIVLYGRSLGSGPTCQLAEELAAAGVELGGVMLQSPLASAFRVAFNFRFTMPGDMFPNIDRVKGVACPMFIIHGTRDEVVPFWHGQELFLGTPTKWRAKPFWVDGAGHNNIEALLREDGTLFERMNDFLD 615
            ++Q+TILFSHGNAEDLG+IY+WF D +R L VN++AY+Y+GYGKS G   E+NCYADI AAY YL   ++  P+QIVLYGRSLGSGP+C LA++ A  G  +GGV+LQSPL SA+RVAF+FRFTM GD FPNID    + CP+FI+HGT+DEVVPFWHG++LF+  P +WRAKPFWV+GAGHNNIEALLR  GT  +++ +FLD
Sbjct:   43 NAQVTILFSHGNAEDLGMIYDWFNDLARVLRVNIMAYDYTGYGKSNGAPCEENCYADIDAAYQYLLDVRRLQPEQIVLYGRSLGSGPSCFLAQKSAKEGKSVGGVILQSPLLSAYRVAFDFRFTMIGDKFPNIDYAPNIKCPVFIVHGTQDEVVPFWHGEDLFMALPQQWRAKPFWVEGAGHNNIEALLRPTGTFVDKVVEFLD 246
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12094.1778.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LBC2_ECTSI3.460e-15899.53Hydrolase_4 domain-containing protein n=2 Tax=Ecto... [more]
A0A7S2XW06_9STRA3.030e-11573.91Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S4D485_HETAK3.720e-11574.04Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A6V2X8D4_HETAK7.260e-11173.21Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A836C9A1_9STRA3.530e-11069.16Alpha/Beta hydrolase protein n=1 Tax=Tribonema min... [more]
A0A7S3DWQ1_9STRA1.270e-10066.18Hypothetical protein n=1 Tax=Amphiprora paludosa T... [more]
A0A7S3LGM2_9STRA7.280e-10065.53Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
B7G294_PHATC2.410e-9865.22Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
A0A7S4EKU0_9STRA3.530e-9864.71Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]
A0A1E7FBT1_9STRA3.530e-9865.20Alpha/beta-hydrolase n=1 Tax=Fragilariopsis cylind... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12094contigEcto-sp13_S_contig12094:1535..5184 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score448.0
Seed ortholog evalue2.5e-123
Seed eggNOG ortholog2880.D8LBC2
Model size645
Hectar predicted targeting categoryother localisation
Exons6
EggNOG free text desc.palmitoyl-(protein) hydrolase activity
EggNOG OGsCOG1073@1,KOG1552@2759
Ec32 ortholog descriptionAlpha/Beta hydrolase fold
Ec32 orthologEc-27_004460.1
Cds size645
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12094.1778.1prot_Ecto-sp13_S_contig12094.1778.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig12094 1535..5184 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462642.5112257-CDS-Ecto-sp13_S_contig12094:1534..15801681462642.5112257-CDS-Ecto-sp13_S_contig12094:1534..1580Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12094 1535..1580 +
1681462642.5215523-CDS-Ecto-sp13_S_contig12094:2324..23741681462642.5215523-CDS-Ecto-sp13_S_contig12094:2324..2374Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12094 2325..2374 +
1681462642.5313363-CDS-Ecto-sp13_S_contig12094:3163..33031681462642.5313363-CDS-Ecto-sp13_S_contig12094:3163..3303Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12094 3164..3303 +
1681462642.541611-CDS-Ecto-sp13_S_contig12094:3699..39151681462642.541611-CDS-Ecto-sp13_S_contig12094:3699..3915Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12094 3700..3915 +
1681462642.5516837-CDS-Ecto-sp13_S_contig12094:4360..44801681462642.5516837-CDS-Ecto-sp13_S_contig12094:4360..4480Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12094 4361..4480 +
1681462642.5625489-CDS-Ecto-sp13_S_contig12094:5111..51841681462642.5625489-CDS-Ecto-sp13_S_contig12094:5111..5184Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12094 5112..5184 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig12094.1778.1

>prot_Ecto-sp13_S_contig12094.1778.1 ID=prot_Ecto-sp13_S_contig12094.1778.1|Name=mRNA_Ecto-sp13_S_contig12094.1778.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=215bp
RSSQITILFSHGNAEDLGLIYEWFYDFSRQLNVNVLAYEYSGYGKSEGTV
SEDNCYADIRAAYDYLTTQKKTPPKQIVLYGRSLGSGPTCQLAEELAAAG
VELGGVMLQSPLASAFRVAFNFRFTMPGDMFPNIDRVKGVACPMFIIHGT
RDEVVPFWHGQELFLGTPTKWRAKPFWVDGAGHNNIEALLREDGTLFERM
NDFLDKWVRNDLSAD
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mRNA from alignment at Ecto-sp13_S_contig12094:1535..5184+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig12094.1778.1 ID=mRNA_Ecto-sp13_S_contig12094.1778.1|Name=mRNA_Ecto-sp13_S_contig12094.1778.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3650bp|location=Sequence derived from alignment at Ecto-sp13_S_contig12094:1535..5184+ (Ectocarpus species13 EcNAP12_S_4_19m)
CGCAGCTCGCAGATTACGATTTTGTTTAGCCACGGGAACGCTGAAGGTGA
GGGACTTGGTATTGTAAGCCTTGCGTGACTCCATTTCAATTGCTATTGGT
CTCAGTGACGTCAGGTGTGGTTTCTAAGCGACGCCAGATGTCGACTCTGT
CCGATTTCTCTTTCCGCGTGATGAAAGAGGTTTGCGAGCACGTACAATGA
AAAGTAGGGTAGGTTTCGTTTTGAGGGTCTCGCCAACACCTCTCGGACAG
GACGTGACGCTCGAGTGCTTAAGTGATATAAACTTTGCCAGGGTGTACCT
TTCGCGTCCATGCTTTCCGTTCTCTAGCTGCTGGTCTGTGGCCATGCACA
AAGGGAACAGTTTGGCCATCGTAGTTTCTGAGCTTCTTCGGACCAGTCTA
GGCTTTACAGCCCTGTTCCGCAACAGCACGAATGATTTGCAACCATACTT
CAATGACGCGTTGTTTTCGGCCGAAATTGTACCCCGCAAGAAGCATGGAG
GTCCACCGAAACGTCCACGGCCTCCAGCTACGCATTGAAATACAGCAGTA
GAATTGTTTCGGCCGCGAGAGCAAGGATGTTCTTCGAGTGGTTTGAACAG
CATGTGTTGTATGTGTGTAGAGAGGCTTCGTTGTATGCTCAGGTTGGAGT
GTGTATGCGTGGACCGCCTCAGAGATGGTTCGGAGATCGGGACAGTCGAC
ATGCCACTCCCCTGGTTGCTACCGCCCGCCCGAACCCTACCCGACCCTAC
CCTCTACCCGTGCTTGGTTATTTTGCGGTGTGACGGACAGACCTCGGCTT
GATCTACGAGTGGTTCTACGACTTCAGCCGACAACTGAATGTGCGTAGTT
TCATGTGCCGTTGCCGCCGTCAGAGCAAGTTTAGCACGACGAATTTGCTC
CTCTCCTCTACCCTACATAGCTGCGGGGCCTTTTATGTTGGGCTGGATGT
CATCATCGTGTGAAAGGTCGTGGAATTGTTTCCCAAATGGACAGTAGTAG
TGTGTCGTCGTCGAAATTCGTTTCCCGTAGAGTTGTATCGTGTCACCCTT
GACGCCCGACCTCTTCCGGTGGCCCGCCTGTCGGTAGGGCCCCGCTCAAC
AGAAAACGTTGTTGTTGGCCGATTTTTGGTCCCGCTATAGCTGGGGTCTT
GAGTCCTTTCGTTGGTCAGCCGCGATGTTAGCTAGGGAAGCAGAGAGAGA
AAGAGGGATGCCACGGGCGGTGGTTCAAGTGTGTGTCGTCCTCCTCAACA
AGGTACTCCGAATCCGGAGACTGGACGCTGTCGTGAACCATCCTCCGCGA
CCCTCTTGTCGGTAGGGGGCCCCGCGGAATGAAGAGGCGTGCTCTCGACT
TCTCTCTTTATGTGTTTAGAACAATGTCATCTTGTCATTGGTCCAGCCGG
TTGTGTAGCGCGGTCGATGTCCACCATTTGAGAAAAACACCCACACGGCA
GCAAGTTCGACGCGTGTGGAAGAGGACCGATGTAGAACTTGTGTTTTTTT
TTCTTCGCTTGTTGTGATTGTGTCTCGTGATGGCAACGAACCCGCGCGGC
CTGTTCGGCATACATGCGTGGTCCGCTTATTTGTATTTTGCTCGGGTCGG
TCGGTCGGGCGGGCGGGCGGTGGCGGCAGGTGAACGTGTTAGCGTACGAG
TACTCGGGGTACGGGAAGAGCGAGGGGACCGTGTCTGAGGACAACTGCTA
CGCCGACATCCGCGCCGCGTACGACTACCTGACCACGCAGAAGAAGACGC
CTCCAAAGCAGATTGTGCTGTGAGTGCGTTGATACGGCAGACATAGAGGC
GCAACCGTATGAAAAGGGGTCGTTGTCCTCGGCGCGCTTTGGTCGTTTCG
TTTTCGTCCAGTTTGTGGTGTGTGTGTTGGGGTGGACGCCGGAGCAGATT
GAATCGACATATGTGCGCCATCTAGTGTTGTTGTCACCAGGAAGCAGACA
TCTGTAGGCAGCCATGCTATTAGGTTGTGCTCTCGTATCGTTTCCTCTTT
TTTGAATCCCGCTATGCGACAGTTTTTCCAACTCTGTTGTTACATCCCGT
TTCTTTTCCTGTTGGCGGCAACGGACCCTCTTTTTTGTGATGATCTCATG
ACGGCAACGATCACCGCCATTTTTTCCGCGTCTAATGTGCCGGTCCGATT
CGCGATGGATGCCAGGTACGGACGGTCACTGGGGAGCGGCCCGACGTGCC
AGCTGGCGGAGGAGCTGGCCGCGGCCGGCGTGGAGTTGGGGGGCGTGATG
CTGCAGAGCCCCCTGGCCTCCGCCTTTCGAGTCGCGTTCAATTTCCGCTT
CACGATGCCGGGGGACATGTTTCCCAACATCGACAGGGTCAAGGGGGTGG
CGTGCCCGATGTTCATCATCCACGGGACAAGGTGCGGCCACTGTCTTTTT
TTTTTTTTGCTTTTGAGAGTGTCCTTCCCGCAGACGGTGCTGCTTCACGT
GTGTTCTTCTTTTGTCTACCTCACTCGTGCTGGGATTTGTTTACCGATGT
TGCGTTGCACGACTGGTCTGGAACGACAACGCTCTGATGTGATGAAATTG
CCTTAATGCACTCGAACGAGCGTGTAACCCTGTGCATGGAGTTTGCCTTT
GCTCCGTACCTCAGTGCGGTGAAAAGCTTGTGCAATGATTGTCTGTATCG
ACCTTCTTTTCATACACTCGGCTCCCGATCAGGAGTCGTCACGGTCGAGA
AAGGAGATCGATCGCATTCACCTGGTTTGAGCAGATGACCACGTATGAGT
CTTCCATCCATGATGTTTCGAACACATTCTGATGGTTTACACCGAACACC
GAACACCGACCACCGACCACAACCAGGGATGAGGTAGTACCGTTCTGGCA
TGGCCAAGAACTGTTCCTCGGAACGCCGACGAAATGGCGGGCAAAACCCT
TCTGGGTCGACGGCGCGGGGCACAACAACATCGAGGCGTTGCTGAGGTAA
GTTGTGTTGCGTTTTTGGCACCCATGCACTGCAATGAGTGGAGCTCTATG
TGGATGACAGTACAATGTTTTACCGTGTTTTAGGCCTTGCTGATGGTAAA
GGCAGATTTGGCATTTTGTTGTCCATGTGTGCGTTTTTTGCGTGTTCTGT
TTCAAGGTTAACGCGCCCGTTCGGGCTGCCTTGTGCCACCGACAGTAGAG
TGTTGTTTGTTTTTCGTATGAGTGAGCACATGGTAGGATATGAAGCAAGA
TTGATCTCGGTTGCTCGCAACCAATGAAGAGCTAGCGATGTGACCGCAAG
CGTTTATGATCGCTAGCGATAGCGCACGCTCGATCGGTCTACAGTCCCCC
CGATGGGTTGATGGTACTGAGTTGTTGCCCCCGCCCCCCCACCCTTGCCC
CCTCATCTCTCACCCCCGCCCGTTTTTTGCGGTGCACATCCCGCCGACTT
GTTGGTTCTCTTCCTGCGTTGGGGTGACCTTGTTTTCGGTTGCGGGGAAA
TTTTTTGGCATGATGGCGACCTGTACGTGTCGCCCCGGTTTGTTTGTTGA
CCTTCCTGATCGTTTTTGTGGCGTCGTCGCTGCTGCTGCCGTCGTCGTCG
TTATCGTTGTCGACGGTGCCCACGCAGGGAGGACGGGACGCTTTTCGAGC
GGATGAACGATTTTCTGGACAAGTGGGTCAGGAACGACCTCTCCGCCGAC
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig12094:1535..5184+

>mRNA_Ecto-sp13_S_contig12094.1778.1 ID=mRNA_Ecto-sp13_S_contig12094.1778.1|Name=mRNA_Ecto-sp13_S_contig12094.1778.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=645bp|location=Sequence derived from alignment at Ecto-sp13_S_contig12094:1535..5184+ (Ectocarpus species13 EcNAP12_S_4_19m)
CGCAGCTCGCAGATTACGATTTTGTTTAGCCACGGGAACGCTGAAGACCT
CGGCTTGATCTACGAGTGGTTCTACGACTTCAGCCGACAACTGAATGTGA
ACGTGTTAGCGTACGAGTACTCGGGGTACGGGAAGAGCGAGGGGACCGTG
TCTGAGGACAACTGCTACGCCGACATCCGCGCCGCGTACGACTACCTGAC
CACGCAGAAGAAGACGCCTCCAAAGCAGATTGTGCTGTACGGACGGTCAC
TGGGGAGCGGCCCGACGTGCCAGCTGGCGGAGGAGCTGGCCGCGGCCGGC
GTGGAGTTGGGGGGCGTGATGCTGCAGAGCCCCCTGGCCTCCGCCTTTCG
AGTCGCGTTCAATTTCCGCTTCACGATGCCGGGGGACATGTTTCCCAACA
TCGACAGGGTCAAGGGGGTGGCGTGCCCGATGTTCATCATCCACGGGACA
AGGGATGAGGTAGTACCGTTCTGGCATGGCCAAGAACTGTTCCTCGGAAC
GCCGACGAAATGGCGGGCAAAACCCTTCTGGGTCGACGGCGCGGGGCACA
ACAACATCGAGGCGTTGCTGAGGGAGGACGGGACGCTTTTCGAGCGGATG
AACGATTTTCTGGACAAGTGGGTCAGGAACGACCTCTCCGCCGAC
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