mRNA_Ecto-sp13_S_contig12089.1773.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig12089.1773.1
Unique NamemRNA_Ecto-sp13_S_contig12089.1773.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig12089.1773.1 vs. uniprot
Match: D8LB84_ECTSI (GI23857 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB84_ECTSI)

HSP 1 Score: 526 bits (1355), Expect = 2.010e-187
Identity = 272/308 (88.31%), Postives = 283/308 (91.88%), Query Frame = 1
Query:    1 MQSHAQRRRGAVIFLHGSGDTGRGVRDWLNSASGGKFDRAVAELGLGEVVYPTAPERRYTLAGGAPSTVWFDRDRLSPGSRQDRAGVLRSLRQVEDEVRKLEDAGVPRSGVFVGGFSMGGCLALEALGAEGLAGRLAGVFSHASFLNDDSAVFEMTSG-SVAQSSRQTPTPVYVTHGAADGMVKVAWGRATAEKLKAKGSFDLTFKEYVELDHELGEEQARSFCFWYFLGIAGLLDWMSTVVGRPGFGQVVGGGDGRQTSSERRGVSPAGTTEVLHADQ-EPACSVTYDITDLGGCQSRALFHVPPGR 918
            MQSHAQR RGAVIFLHGSGDTG GVRDWL+SASGGKFDRA+AELGLGEVVYPTAPERRYTLAGGA STVWFDR+RLSPGSRQDRAGVLRSLRQVEDEVRKLEDAGVPRSGVFVGGFSMGGCLALEALGAEGLAGRLAGVFSHASFL+DDSAVFE+T+G S AQSSR  PTPVYVTHGAADGMVKVAWGR+TAEKLKA+G  DLTFKE+VELDHEL EEQ           IAGLLDW+STVVGRPGFGQVVGGGDGRQTS+ RRGVSPAG TEVLHADQ EPACSVTYDITDLGGCQSRA FHVPPGR
Sbjct:    1 MQSHAQRPRGAVIFLHGSGDTGGGVRDWLSSASGGKFDRAIAELGLGEVVYPTAPERRYTLAGGAVSTVWFDRERLSPGSRQDRAGVLRSLRQVEDEVRKLEDAGVPRSGVFVGGFSMGGCLALEALGAEGLAGRLAGVFSHASFLSDDSAVFEVTAGGSAAQSSRPAPTPVYVTHGAADGMVKVAWGRSTAEKLKARGGLDLTFKEHVELDHELEEEQ-----------IAGLLDWISTVVGRPGFGQVVGGGDGRQTSAARRGVSPAGATEVLHADQVEPACSVTYDITDLGGCQSRASFHVPPGR 297          
BLAST of mRNA_Ecto-sp13_S_contig12089.1773.1 vs. uniprot
Match: A0A6H5K9N1_9PHAE (Abhydrolase_2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9N1_9PHAE)

HSP 1 Score: 410 bits (1053), Expect = 1.400e-142
Identity = 210/232 (90.52%), Postives = 218/232 (93.97%), Query Frame = 1
Query:    1 MQSHAQRRRGAVIFLHGSGDTGRGVRDWLNSASGGKFDRAVAELGLGEVVYPTAPERRYTLAGGAPSTVWFDRDRLSPGSRQDRAGVLRSLRQVEDEVRKLEDAGVPRSGVFVGGFSMGGCLALEALGAEGLAGRLAGVFSHASFLNDDSAVFEMTSGSVAQSSRQTPTPVYVTHGAADGMVKVAWGRATAEKLKAKGSFDLTFKEYVELDHELGEEQARSFCFWYFLGIAG 696
            MQSHAQRRRGAVIFLHGSGDTGRGVRDWL+SASGGKF+RA+AELGLGEVVYPTAPERRYTLAGGAPSTVWFDR+RLSPGS QDRAGVLRSLRQVEDEVRKLEDAGVP SGVFVGGFSMGGCLALE LGAEGLAGRLAGVFSHASFL+DDSAVFEMT+GS AQSSRQTPTPVYVTHGAADGMVKVAWGRATAEKLKAK   DLTFKE+VELDHELGEEQAR      FLG+ G
Sbjct:    1 MQSHAQRRRGAVIFLHGSGDTGRGVRDWLSSASGGKFNRAIAELGLGEVVYPTAPERRYTLAGGAPSTVWFDRERLSPGSPQDRAGVLRSLRQVEDEVRKLEDAGVPSSGVFVGGFSMGGCLALETLGAEGLAGRLAGVFSHASFLSDDSAVFEMTAGSAAQSSRQTPTPVYVTHGAADGMVKVAWGRATAEKLKAKTGLDLTFKEHVELDHELGEEQARK-----FLGVGG 227          
BLAST of mRNA_Ecto-sp13_S_contig12089.1773.1 vs. uniprot
Match: A0A7S4S2G1_9DINO (Hypothetical protein n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4S2G1_9DINO)

HSP 1 Score: 152 bits (384), Expect = 5.660e-41
Identity = 91/193 (47.15%), Postives = 121/193 (62.69%), Query Frame = 1
Query:   34 VIFLHGSGDTGRGVRDWLNSASGGKFDRAVAELGLGEVVYPTAPERRYTLAGGAPSTVWFDRDRLSPGSRQDRAGVLRSLRQVEDEVRKLEDAGVPRSGVFVGGFSMGGCLALEAL-GAEGLAGRLAGVFSHASFLNDDS----AVFEMTSGSVAQSSRQTPTP-VYVTHGAADGMVKVAWGRATAEKLKAKG 594
            +IFLHGSGD G G+RDWL S SGG F+R +   G+ +VVYP AP   YTL GG P  VWFDR  L+  + +D AGV RSL QV+ E+ +L +AG+ RS + VGG SMGGCLA+ A  GA   AG LA     + FL  DS    A  E  +G+ +  +  +  P +++ HG ADGM+  +W + T E+L+A G
Sbjct:   35 LIFLHGSGDCGAGIRDWLASTSGGDFERRLTAAGV-KVVYPDAPAVPYTLNGGYPQNVWFDRVALAYNAPEDVAGVARSLEQVDAEIDRLIEAGISRSHIAVGGMSMGGCLAMHAAYGAGRHAGALAAAACLSCFLPHDSGLDAACRERLAGAGSGEAGASGAPALFMGHGEADGMINPSWAQLTRERLEACG 226          
BLAST of mRNA_Ecto-sp13_S_contig12089.1773.1 vs. uniprot
Match: A0A812WYN6_SYMPI (LYPLAL1 protein n=1 Tax=Symbiodinium pilosum TaxID=2952 RepID=A0A812WYN6_SYMPI)

HSP 1 Score: 149 bits (377), Expect = 4.730e-40
Identity = 93/216 (43.06%), Postives = 132/216 (61.11%), Query Frame = 1
Query:   31 AVIFLHGSGDTGRGVRDWLNSASGGKFDRAVAELGLGEVVYPTAPERRYTLAGGAPSTVWFDRDRLSPGSRQDRAGVLRSLRQVEDEVRKLEDAGVPRSGVFVGGFSMGGCLALE-ALGAEGLAGRLAGVFSHASFLNDDSAVFEMTSGSVAQSSRQTPTPVYVTHGAADGMVKVAWGRATAEKLKAKGSFDLTFKEYVELDHELGEEQA---RSF 666
            A+IFLHGSGDTG GV+ WL++ SGG F+ ++A  G+  +++PTA    Y+L GG P TVWFDR  ++  + +D AG+ RS+  V+ E+ KL ++G+P S + VGG SMGGC+AL  A G    AGRL  V S ++FL  +S      S  +  S  QT  P+++ HG  DGM+++ W RAT  +L A G       E+  + HEL  E+    RSF
Sbjct:   32 ALIFLHGSGDTGEGVQAWLHAVSGGAFEASLAREGI-SMLFPTATMIPYSLIGGMPRTVWFDRVAMAYEAPEDVAGLKRSVELVDKEIDKLVESGIPLSKIGVGGMSMGGCVALHVAYGMGRHAGRLGMVASLSTFLPKESYFDADASRRLTAS--QT-APLFMAHGQDDGMIRIEWARATHSRLLAAGIDCKELLEFPGVQHELCTEEVGLLRSF 243          
BLAST of mRNA_Ecto-sp13_S_contig12089.1773.1 vs. uniprot
Match: A0A812M591_9DINO (LYPLAL1 protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812M591_9DINO)

HSP 1 Score: 148 bits (374), Expect = 6.620e-40
Identity = 89/216 (41.20%), Postives = 130/216 (60.19%), Query Frame = 1
Query:   31 AVIFLHGSGDTGRGVRDWLNSASGGKFDRAVAELGLGEVVYPTAPERRYTLAGGAPSTVWFDRDRLSPGSRQDRAGVLRSLRQVEDEVRKLEDAGVPRSGVFVGGFSMGGCLALE-ALGAEGLAGRLAGVFSHASFLNDDSAVFEMTSGSVAQSSRQTPTPVYVTHGAADGMVKVAWGRATAEKLKAKGSFDLTFKEYVELDHELGEEQA---RSF 666
            A+IFLHGSGDTG GV+ WL++ S G F+ ++A  G+  + +PTAP   Y+L GGAP TVWFDR  ++  + +D  G+ RS+  V+ E+ KL  +G+P S + VGG SMGGCLAL  A G    AGRL    S ++FL  +S    + + +  + +  +  P+++ HG  DGM+++ W RAT  +L A G       E+  + HEL  E+    RSF
Sbjct:    7 ALIFLHGSGDTGEGVQAWLHAVSDGAFEASLARDGI-ILQFPTAPRIPYSLIGGAPQTVWFDRVAMAYEAPEDVPGLKRSVELVDKEIDKLVHSGIPISKIGVGGMSMGGCLALHVAYGMGRYAGRLGMAASLSTFLPKESC---LDADATRRFTASSSPPLFMAHGQNDGMIRLEWARATHGRLLAAGIAGKELLEFPGVQHELCPEEVALLRSF 218          
BLAST of mRNA_Ecto-sp13_S_contig12089.1773.1 vs. uniprot
Match: A0A835ZH59_9STRA (Alpha/Beta hydrolase protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZH59_9STRA)

HSP 1 Score: 147 bits (370), Expect = 1.970e-39
Identity = 91/217 (41.94%), Postives = 123/217 (56.68%), Query Frame = 1
Query:   25 RGAVIFLHGSGDTGRGVRDWLNSASGGKFDRAVAELGLGEVVYPTAPERRYTLAGGAPSTVWFDRDRLSPGSRQDRAGVLRSLRQVEDEVRKLEDAGVPRSGVFVGGFSMGGCLALEALGAEGLAGRLAGVFSHASFLNDDSAVFEMTSGSVAQSSRQTPTPVYVTHGAADGMVKVAWGRATAEKLKAKGSFDLTFKEYVELDHELGEEQARSFCFW 675
            RG +IFLHGSGDTG GV++WL+  +GG F+R +A  G+   +YPTAP R YT+  G    VW DR  L   S  D   VL S+  VE  + +LE+AGV RS V +GGFSMGG +AL+ + A   A  LAGVFS +SFL+  S ++                 +Y  HG  D MV  AW R+TA+ L + G + +T  EY  L H++   +  +   W
Sbjct:    1 RGGLIFLHGSGDTGPGVQEWLDYITGGSFERTLAGQGI-LCLYPTAPLRPYTMCQGELRHVWHDRLALDFNSIPDEEHVLESMEIVEGLLEELEEAGVDRSAVVLGGFSMGGGVALQCIAAP-WACHLAGVFSLSSFLHAASPLYAQXXXXXXX--XXXXXXLYTAHGLRDEMVSHAWARSTAQGLTSAG-YAVTHAEYATLGHDMSRAEVEALLQW 212          
BLAST of mRNA_Ecto-sp13_S_contig12089.1773.1 vs. uniprot
Match: A0A812WHJ6_9DINO (LYPLAL1 protein n=5 Tax=Symbiodinium TaxID=2949 RepID=A0A812WHJ6_9DINO)

HSP 1 Score: 155 bits (393), Expect = 7.790e-39
Identity = 91/208 (43.75%), Postives = 129/208 (62.02%), Query Frame = 1
Query:   34 VIFLHGSGDTGRGVRDWLNSASGGKFDRAVAELGLGEVVYPTAPERRYTLAGGAPSTVWFDRDRLSPGSRQDRAGVLRSLRQVEDEVRKLEDAGVPRSGVFVGGFSMGGCLALE-ALGAEGLAGRLAGVFSHASFLNDDSAVFEMTSGSVAQSSRQTPTPVYVTHGAADGMVKVAWGRATAEKLKAKGSFDLTFKEYVELDHELGEEQ 654
            +IFLHGSGDTG GV+ WL++ SGG F+ ++A  G+  + +PTA    Y+L GG P TVWFDR  ++  + +D  G+ RS+  V+ E+ KL ++GVP S + VGG SMGGCLAL  A G    AGRL  V S ++FL  DS + E      A+    +P P+++ HG ADGM+++ W RAT  +L A G       E+ ++ HEL  E+
Sbjct:  976 LIFLHGSGDTGEGVQGWLHAISGGAFEASLAREGIA-MQFPTAARIPYSLIGGMPQTVWFDRVAMAYEAPEDVPGLKRSVELVDKEIDKLVESGVPISKIGVGGMSMGGCLALHVAYGMGRYAGRLGMVASLSTFLPKDSCLDE-----AARRFASSP-PLFMAHGQADGMIRLEWARATHRRLLAAGITSKELLEFPDVQHELCSEE 1176          
BLAST of mRNA_Ecto-sp13_S_contig12089.1773.1 vs. uniprot
Match: UPI001BB172A5 (lysophospholipase-like protein 1 isoform X1 n=2 Tax=Lytechinus variegatus TaxID=7654 RepID=UPI001BB172A5)

HSP 1 Score: 140 bits (352), Expect = 1.320e-36
Identity = 81/214 (37.85%), Postives = 119/214 (55.61%), Query Frame = 1
Query:   34 VIFLHGSGDTGRGVRDWLNSASGGKFDRAVAELGLGEVVYPTAPERRYTLAGGAPSTVWFDRDRLSPGSRQDRAGVLRSLRQVEDEVRKLEDAGVPRSGVFVGGFSMGGCLALEALGAEGLAGRLAGVFSHASFLNDDSAVFEMTSGSVAQSSRQTPTPVYVTHGAADGMVKVAWGRATAEKLKAKGSFDLTFKEYVELDHELGEEQARSFCFW 675
            ++FLHGSGDT  G+++WL S  G  F      L   ++++P+AP R YT   GAPSTVWFDR R++P   +D   +     ++   ++   D G+PR+ + VGGFSMGGCLAL    A      +AGVF+ +SFLND+S V++     +A S  + P P++  HG  D +V   WG +T + L  K      F  Y  L HE+ +++      W
Sbjct:   22 IVFLHGSGDTSEGLQEWLFSILGKSFS-----LPHSKIIFPSAPSRPYTPMNGAPSTVWFDRKRIAPNVPEDLESIDPMCEEIGKVIQLEVDQGIPRNKIIVGGFSMGGCLALHV--AYRFQQEIAGVFALSSFLNDNSKVYK----DLASSDCRRP-PLFQCHGKVDPLVLYEWGESTKDLL-IKAGVMCQFHSYPRLYHEMNKDELDKLQAW 222          
BLAST of mRNA_Ecto-sp13_S_contig12089.1773.1 vs. uniprot
Match: A0A7M7T4Z4_STRPU (Palmitoyl-protein hydrolase n=2 Tax=Strongylocentrotus purpuratus TaxID=7668 RepID=A0A7M7T4Z4_STRPU)

HSP 1 Score: 138 bits (347), Expect = 7.280e-36
Identity = 81/215 (37.67%), Postives = 121/215 (56.28%), Query Frame = 1
Query:   31 AVIFLHGSGDTGRGVRDWLNSASGGKFDRAVAELGLGEVVYPTAPERRYTLAGGAPSTVWFDRDRLSPGSRQDRAGVLRSLRQVEDEVRKLEDAGVPRSGVFVGGFSMGGCLALEALGAEGLAGRLAGVFSHASFLNDDSAVFEMTSGSVAQSSRQTPTPVYVTHGAADGMVKVAWGRATAEKLKAKGSFDLTFKEYVELDHELGEEQARSFCFW 675
            ++IFLHGSGDT  G+++WL S  G KF      L   +V++P+AP R YT   GAPSTVWFDR ++S  + +D   V     ++   +++  D G+PR+ + VGGFSMGGCLAL    A      L GVF+ ++FLN++S V++     +A    + P P++  HG  D +V   WG  T ++L   G     F+ Y  L HE+ +++      W
Sbjct:   21 SIIFLHGSGDTSEGLQEWLFSILGRKFC-----LPHSKVIFPSAPLRPYTPMNGAPSTVWFDRKQISQNAPEDLESVDPMCEEISKVIQQEVDQGIPRNKIIVGGFSMGGCLALHV--AYRFQRELGGVFALSAFLNNNSKVYQ----DLASPDSRRP-PLFQCHGQVDPLVLYEWGETTKDQLTRAG-VTCQFQRYPRLYHEMNKDELDKLQAW 222          
BLAST of mRNA_Ecto-sp13_S_contig12089.1773.1 vs. uniprot
Match: UPI001B88763C (lysophospholipase-like protein 1 n=1 Tax=Gigantopelta aegis TaxID=1735272 RepID=UPI001B88763C)

HSP 1 Score: 132 bits (333), Expect = 8.990e-34
Identity = 82/216 (37.96%), Postives = 121/216 (56.02%), Query Frame = 1
Query:   28 GAVIFLHGSGDTGRGVRDWLNSASGGKFDRAVAELGLGEVVYPTAPERRYTLAGGAPSTVWFDRDRLSPGSRQDRAGVLRSLRQVEDEVRKLEDAGVPRSGVFVGGFSMGGCLALEALGAEGLAGRLAGVFSHASFLNDDSAVFEMTSGSVAQSSRQTPTPVYVTHGAADGMVKVAWGRATAEKLKAKGSFDLTFKEYVELDHELGEEQARSFCFW 675
            G+VIFLHGSGDTG G+R WL S  G +F  A   L    V++PTAP R Y+  GGA STVWFDRD++SP + +  + +  + ++V   +      G+P++ + +GGFSMGGCLAL    A      +AGVF+ +SFL  +S+V++       +    +  P++  HG  D +V   WG  + +KLK+ G  +  F     L HEL  ++      W
Sbjct:   23 GSVIFLHGSGDTGPGIRQWLQSVLGEEF--AFPHL---RVIFPTAPPRPYSPMGGAVSTVWFDRDQISPFTAETES-LTTACKEVSHLIEAEVKNGIPKNRIVIGGFSMGGCLALHL--AYRFHKEIAGVFALSSFLQTESSVYKSI-----KEDGSSLVPLFQFHGKKDCLVMYEWGEDSFQKLKSLG-VEGQFHTLSHLQHELNRKEIELLKQW 224          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12089.1773.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LB84_ECTSI2.010e-18788.31GI23857 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
A0A6H5K9N1_9PHAE1.400e-14290.52Abhydrolase_2 domain-containing protein n=1 Tax=Ec... [more]
A0A7S4S2G1_9DINO5.660e-4147.15Hypothetical protein n=1 Tax=Alexandrium monilatum... [more]
A0A812WYN6_SYMPI4.730e-4043.06LYPLAL1 protein n=1 Tax=Symbiodinium pilosum TaxID... [more]
A0A812M591_9DINO6.620e-4041.20LYPLAL1 protein n=1 Tax=Symbiodinium natans TaxID=... [more]
A0A835ZH59_9STRA1.970e-3941.94Alpha/Beta hydrolase protein (Fragment) n=1 Tax=Tr... [more]
A0A812WHJ6_9DINO7.790e-3943.75LYPLAL1 protein n=5 Tax=Symbiodinium TaxID=2949 Re... [more]
UPI001BB172A51.320e-3637.85lysophospholipase-like protein 1 isoform X1 n=2 Ta... [more]
A0A7M7T4Z4_STRPU7.280e-3637.67Palmitoyl-protein hydrolase n=2 Tax=Strongylocentr... [more]
UPI001B88763C8.990e-3437.96lysophospholipase-like protein 1 n=1 Tax=Gigantope... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12089contigEcto-sp13_S_contig12089:781..4010 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score526.6
Seed ortholog evalue8e-147
Seed eggNOG ortholog2880.D8LB84
Preferred nameLYPLAL1
Model size921
KEGG koko:K06999
Hectar predicted targeting categoryother localisation
GOsGO:0002084,GO:0003674,GO:0003824,GO:0004620,GO:0004622,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0008474,GO:0009056,GO:0009057,GO:0009987,GO:0016298,GO:0016787,GO:0016788,GO:0016790,GO:0019538,GO:0030163,GO:0032879,GO:0032880,GO:0035601,GO:0036211,GO:0042157,GO:0042159,GO:0042996,GO:0042997,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051049,GO:0051051,GO:0051223,GO:0051224,GO:0052689,GO:0060341,GO:0060627,GO:0065007,GO:0070201,GO:0071704,GO:0090087,GO:0098599,GO:0098732,GO:0098734,GO:0140096,GO:1901564,GO:1901565,GO:1901575,GO:1903076,GO:1903077,GO:1903827,GO:1903828,GO:1904375,GO:1904376,GO:1904950,GO:1905475,GO:1905476
Exons6
EggNOG free text desc.acyl-protein thioesterase
EggNOG OGsCOG0400@1,KOG2112@2759
Ec32 ortholog descriptionPhospholipase/carboxylesterase/thioesterase
Ec32 orthologEc-27_004830.1
Cds size921
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12089.1773.1prot_Ecto-sp13_S_contig12089.1773.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig12089 781..4010 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462641.9946342-CDS-Ecto-sp13_S_contig12089:780..10591681462641.9946342-CDS-Ecto-sp13_S_contig12089:780..1059Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12089 781..1059 +
1681462642.013193-CDS-Ecto-sp13_S_contig12089:1640..17041681462642.013193-CDS-Ecto-sp13_S_contig12089:1640..1704Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12089 1641..1704 +
1681462642.0235639-CDS-Ecto-sp13_S_contig12089:1830..19421681462642.0235639-CDS-Ecto-sp13_S_contig12089:1830..1942Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12089 1831..1942 +
1681462642.0319483-CDS-Ecto-sp13_S_contig12089:2322..25541681462642.0319483-CDS-Ecto-sp13_S_contig12089:2322..2554Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12089 2323..2554 +
1681462642.0411808-CDS-Ecto-sp13_S_contig12089:3127..32751681462642.0411808-CDS-Ecto-sp13_S_contig12089:3127..3275Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12089 3128..3275 +
1681462642.049689-CDS-Ecto-sp13_S_contig12089:3924..40101681462642.049689-CDS-Ecto-sp13_S_contig12089:3924..4010Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12089 3925..4010 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig12089.1773.1

>prot_Ecto-sp13_S_contig12089.1773.1 ID=prot_Ecto-sp13_S_contig12089.1773.1|Name=mRNA_Ecto-sp13_S_contig12089.1773.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=307bp
MQSHAQRRRGAVIFLHGSGDTGRGVRDWLNSASGGKFDRAVAELGLGEVV
YPTAPERRYTLAGGAPSTVWFDRDRLSPGSRQDRAGVLRSLRQVEDEVRK
LEDAGVPRSGVFVGGFSMGGCLALEALGAEGLAGRLAGVFSHASFLNDDS
AVFEMTSGSVAQSSRQTPTPVYVTHGAADGMVKVAWGRATAEKLKAKGSF
DLTFKEYVELDHELGEEQARSFCFWYFLGIAGLLDWMSTVVGRPGFGQVV
GGGDGRQTSSERRGVSPAGTTEVLHADQEPACSVTYDITDLGGCQSRALF
HVPPGR*
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mRNA from alignment at Ecto-sp13_S_contig12089:781..4010+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig12089.1773.1 ID=mRNA_Ecto-sp13_S_contig12089.1773.1|Name=mRNA_Ecto-sp13_S_contig12089.1773.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3230bp|location=Sequence derived from alignment at Ecto-sp13_S_contig12089:781..4010+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCAGAGTCATGCCCAACGCCGGCGGGGGGCCGTGATCTTCCTCCATGG CTCCGGCGACACCGGCCGCGGCGTTCGAGACTGGCTCAACTCCGCGTCGG GGGGCAAGTTCGATAGGGCCGTAGCCGAGCTGGGTCTCGGGGAGGTGGTG TACCCGACGGCACCGGAAAGACGGTACACGCTTGCGGGGGGGGCGCCGTC GACAGTGTGGTTCGACCGCGATAGGTTAAGCCCGGGGTCTCGACAGGACC GCGCGGGCGTTCTTCGTTCTTTGCGACAGGTTAGAGGGAAGGGGATGTGG GGGGGGGGGGGTTACTCATGTAAACCCATGCTGTAGTCGATAGACCATAG ACCTCGCATCCGACGGAGCTGTATGTCAGGTTTTCGCCGGCCCAGGCTGG GCAGAGGGGAGGGGGGCGAAGGTGATGAGTGTGTGAGGGAGGAGGGGCCG GGATTGAAGATTGCAGGAAGAAGGAGCTGTGTCTCACCAGCTTTGGCCGA TGCGGACAAGCACTTCTGTTGGTAGCAGCTTCTTTGTCTTGCGTTGGAAG CACTTACCAATACACGGTTGGTCACAGATGTTGTGTGTTTCGTGTCAGTT TTGGTCCCAGAGAGCGTAAAAGAACACGAGAATTGACCGACGAAGGAGGA GCTTGTTTAACAAGGCAGGAGGCAGAGAAGGAAGGACCGGAAACGCACAT ATGTGTTGAGGAGCACCCGATTCGTAGGGTGTCCGTCGATTGACTTTAAC ATGATTGGGACACCTTCGCATATGCATACCGTAAGAGAACGGAAGCGTTT CGTTGGTGTTCCACTTTTCTTCATGGTCTTACCGTCTCGAATACCTCCGG CCGGGACCAGGTGGAGGACGAAGTGCGAAAGTTGGAGGACGCGGGAGTTC CCAGGAGCGGCGTGTTTGTCGGCGGTGAGTCTACATGTCGCTGCCATCGC GCACGGACACCCTCTCCTTCTGTCCCCACGCTTGTATCTAACGTGTTGCC TGCCTGATACACTTCGCCCCTTGTTGGTATCTCCCAACACGCCTCCGTAG GGTTTTCCATGGGGGGATGTCTGGCGCTGGAGGCTCTCGGGGCCGAGGGG CTAGCGGGACGATTAGCCGGGGTGTTTAGCCACGCCAGCTTCCTGAACGA CGATTCGGCCGTGTGAGTGTATGTTTGTTGACATAAACATCATGTTATTT TGACGCACACGAGTGTTTGTCGACGGACACGTACACACACCACATTTTGC CGCGGTACTATGCAATGGCCCGGATGATGATGATGTCAAGCGCGCGAAAC GTTGCAGCTCGTGTGCGGTGCCTCCTGCTTTCGCGACCTCAAGCACTGGC GGTTACCCCTCGCCCACCATTTTCCGCCGCCCTCCGGCCGAAGCATGCAC CCCCGTCCTCCCGCAGAAAAGAAAAGAGCGTTTTCGTTTTGTCCATTTTC CCGCAGTTCTTGAGAAAAACACGCTCTCATCCTCATCCTCGTCTTGGCAC ACCAAAAATGTTTTTTGCCGATCAACTCCTTCCGGCGGCCAGGTTCGAGA TGACGTCGGGGTCGGTAGCGCAATCGTCCCGGCAAACCCCCACCCCCGTC TACGTCACCCACGGCGCTGCCGACGGCATGGTGAAGGTCGCCTGGGGCAG GGCTACCGCTGAGAAGCTCAAGGCCAAGGGGAGCTTCGACCTCACTTTCA AGGAGTACGTCGAGCTAGACCACGAGCTAGGAGAGGAGCAGGCGCGGAGT TTTTGCTTTTGGTATTTTCTTGGGGTGGGTAGGGGGTGGTCGTGAAGATC GGCAACGACGGGAAAGGGATATAGGGCAAGAGTGGTGGTGTTTTTTCCCG CGTCCCCGCCCCCCTCACCTTTGGCAAAGTAGATTGGCCATCATCGGTGA TCGACCCTGTAGGAACAATGCTCCGTCCTCTCGAGGACGCGCGGTGTTCT ATGGCCTTACCGGTAAGGCGTGCAAAACATGAGTACGCCCCCCCCCCCCC CCCCCCCCCCCCCCCCCCCCACCCCCACGCGGCCCACTGCGTACCGGCCC AAAGACCGGCAAGCACCCGGACAAGGAGTACCGTTGTTAAACCTGCTCCT GTTGGAGGGAACTCTCGAACGTTGGGGGTGTGCTATGTATACCGCGTGTC TTCCACAGTTTCACACACTCAAACGGTTTTGGCCATTCATTCTTGTCACC TCCCCAGGAGATAGGCCCCCTCCCCACTCTGGCGGGTAGAAAAGTTGGGT AGGCATCTCGCGTGTATCTCTGTCTCCTTTTTTTTTTCTTTTTCCGACCG GCATTTCGTGCACCCGTTCGCCATTCCGATCCGTGTTTTTTTCGCAGATT GCCGGGCTGTTGGACTGGATGTCGACCGTTGTCGGCCGACCTGGGTTCGG GCAGGTGGTGGGGGGCGGGGACGGCCGGCAAACGTCCTCAGAGCGACGGG GGGTGTCTCCGGCAGGAACGACCGAGGTGCTCCATGCCGACCAAGGTATG TCAAAGGGGACTAATATAGTATGCGGAGGAGATGGATTTTGACGTGTCGT AAGCATGTGAAAGAGAGGAATGAAACTTGTGCCGCTGTGTGCCTTCGTGT TGGAACATTTTGTCTACGTTCGTTAGCCCATGCTCTCTCCATCTATCCGC GTTTTCTCCGTTGAATGTTACGCCGATCGGGAGGGGGGGGGTCACACAGA ATGGCTCCTCTTCGCTACCGCCCCCTCCTCCTTTCCAACTGTGTCCCTTC GAAGTTGCCTCGAAATTCCAAAGCCAAGAGGGATCGGCAAGTTCCTTTTC TCGAGAGCGTATACATACAAGTATTGATTTCGTGTGGTCATGCAAGTAAC GCGTGCGACTTTGTTGACTCCTTGCCGCCGCCAGGCCACCAACACTTGTA GCTGCGCACCGCGGTCCCGTCTACTGGTAGCGCCCCCATGTCCTCTCTCT CTTGTGTGTGCGTGTTTGTGTGTCACTCTTGTCTTCTTGATCGAAAAATC GATCCAAACTGTTGCTGATGCTCTGATGCTGCTTCTGCTGCTGCCGCTGT CGTGATTGCTTATGCTGCTTGTTGCCCCTGGTTCCGCCAATGCAACGTAT CGGTCGCTACAATCTGCGTACCCCCCCCCCCTTCCCCCGCCTAGAACCTG CCTGCTCGGTGACGTACGACATCACCGATCTTGGGGGGTGCCAGTCCCGA GCCTTATTTCACGTACCCCCCGGAAGGTGA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig12089:781..4010+

>mRNA_Ecto-sp13_S_contig12089.1773.1 ID=mRNA_Ecto-sp13_S_contig12089.1773.1|Name=mRNA_Ecto-sp13_S_contig12089.1773.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=921bp|location=Sequence derived from alignment at Ecto-sp13_S_contig12089:781..4010+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCAGAGTCATGCCCAACGCCGGCGGGGGGCCGTGATCTTCCTCCATGG
CTCCGGCGACACCGGCCGCGGCGTTCGAGACTGGCTCAACTCCGCGTCGG
GGGGCAAGTTCGATAGGGCCGTAGCCGAGCTGGGTCTCGGGGAGGTGGTG
TACCCGACGGCACCGGAAAGACGGTACACGCTTGCGGGGGGGGCGCCGTC
GACAGTGTGGTTCGACCGCGATAGGTTAAGCCCGGGGTCTCGACAGGACC
GCGCGGGCGTTCTTCGTTCTTTGCGACAGGTGGAGGACGAAGTGCGAAAG
TTGGAGGACGCGGGAGTTCCCAGGAGCGGCGTGTTTGTCGGCGGGTTTTC
CATGGGGGGATGTCTGGCGCTGGAGGCTCTCGGGGCCGAGGGGCTAGCGG
GACGATTAGCCGGGGTGTTTAGCCACGCCAGCTTCCTGAACGACGATTCG
GCCGTGTTCGAGATGACGTCGGGGTCGGTAGCGCAATCGTCCCGGCAAAC
CCCCACCCCCGTCTACGTCACCCACGGCGCTGCCGACGGCATGGTGAAGG
TCGCCTGGGGCAGGGCTACCGCTGAGAAGCTCAAGGCCAAGGGGAGCTTC
GACCTCACTTTCAAGGAGTACGTCGAGCTAGACCACGAGCTAGGAGAGGA
GCAGGCGCGGAGTTTTTGCTTTTGGTATTTTCTTGGGATTGCCGGGCTGT
TGGACTGGATGTCGACCGTTGTCGGCCGACCTGGGTTCGGGCAGGTGGTG
GGGGGCGGGGACGGCCGGCAAACGTCCTCAGAGCGACGGGGGGTGTCTCC
GGCAGGAACGACCGAGGTGCTCCATGCCGACCAAGAACCTGCCTGCTCGG
TGACGTACGACATCACCGATCTTGGGGGGTGCCAGTCCCGAGCCTTATTT
CACGTACCCCCCGGAAGGTGA
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