mRNA_Ecto-sp13_S_contig12089.1773.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig12089.1773.1 vs. uniprot
Match: D8LB84_ECTSI (GI23857 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB84_ECTSI) HSP 1 Score: 526 bits (1355), Expect = 2.010e-187 Identity = 272/308 (88.31%), Postives = 283/308 (91.88%), Query Frame = 1
Query: 1 MQSHAQRRRGAVIFLHGSGDTGRGVRDWLNSASGGKFDRAVAELGLGEVVYPTAPERRYTLAGGAPSTVWFDRDRLSPGSRQDRAGVLRSLRQVEDEVRKLEDAGVPRSGVFVGGFSMGGCLALEALGAEGLAGRLAGVFSHASFLNDDSAVFEMTSG-SVAQSSRQTPTPVYVTHGAADGMVKVAWGRATAEKLKAKGSFDLTFKEYVELDHELGEEQARSFCFWYFLGIAGLLDWMSTVVGRPGFGQVVGGGDGRQTSSERRGVSPAGTTEVLHADQ-EPACSVTYDITDLGGCQSRALFHVPPGR 918
MQSHAQR RGAVIFLHGSGDTG GVRDWL+SASGGKFDRA+AELGLGEVVYPTAPERRYTLAGGA STVWFDR+RLSPGSRQDRAGVLRSLRQVEDEVRKLEDAGVPRSGVFVGGFSMGGCLALEALGAEGLAGRLAGVFSHASFL+DDSAVFE+T+G S AQSSR PTPVYVTHGAADGMVKVAWGR+TAEKLKA+G DLTFKE+VELDHEL EEQ IAGLLDW+STVVGRPGFGQVVGGGDGRQTS+ RRGVSPAG TEVLHADQ EPACSVTYDITDLGGCQSRA FHVPPGR
Sbjct: 1 MQSHAQRPRGAVIFLHGSGDTGGGVRDWLSSASGGKFDRAIAELGLGEVVYPTAPERRYTLAGGAVSTVWFDRERLSPGSRQDRAGVLRSLRQVEDEVRKLEDAGVPRSGVFVGGFSMGGCLALEALGAEGLAGRLAGVFSHASFLSDDSAVFEVTAGGSAAQSSRPAPTPVYVTHGAADGMVKVAWGRSTAEKLKARGGLDLTFKEHVELDHELEEEQ-----------IAGLLDWISTVVGRPGFGQVVGGGDGRQTSAARRGVSPAGATEVLHADQVEPACSVTYDITDLGGCQSRASFHVPPGR 297
BLAST of mRNA_Ecto-sp13_S_contig12089.1773.1 vs. uniprot
Match: A0A6H5K9N1_9PHAE (Abhydrolase_2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9N1_9PHAE) HSP 1 Score: 410 bits (1053), Expect = 1.400e-142 Identity = 210/232 (90.52%), Postives = 218/232 (93.97%), Query Frame = 1
Query: 1 MQSHAQRRRGAVIFLHGSGDTGRGVRDWLNSASGGKFDRAVAELGLGEVVYPTAPERRYTLAGGAPSTVWFDRDRLSPGSRQDRAGVLRSLRQVEDEVRKLEDAGVPRSGVFVGGFSMGGCLALEALGAEGLAGRLAGVFSHASFLNDDSAVFEMTSGSVAQSSRQTPTPVYVTHGAADGMVKVAWGRATAEKLKAKGSFDLTFKEYVELDHELGEEQARSFCFWYFLGIAG 696
MQSHAQRRRGAVIFLHGSGDTGRGVRDWL+SASGGKF+RA+AELGLGEVVYPTAPERRYTLAGGAPSTVWFDR+RLSPGS QDRAGVLRSLRQVEDEVRKLEDAGVP SGVFVGGFSMGGCLALE LGAEGLAGRLAGVFSHASFL+DDSAVFEMT+GS AQSSRQTPTPVYVTHGAADGMVKVAWGRATAEKLKAK DLTFKE+VELDHELGEEQAR FLG+ G
Sbjct: 1 MQSHAQRRRGAVIFLHGSGDTGRGVRDWLSSASGGKFNRAIAELGLGEVVYPTAPERRYTLAGGAPSTVWFDRERLSPGSPQDRAGVLRSLRQVEDEVRKLEDAGVPSSGVFVGGFSMGGCLALETLGAEGLAGRLAGVFSHASFLSDDSAVFEMTAGSAAQSSRQTPTPVYVTHGAADGMVKVAWGRATAEKLKAKTGLDLTFKEHVELDHELGEEQARK-----FLGVGG 227
BLAST of mRNA_Ecto-sp13_S_contig12089.1773.1 vs. uniprot
Match: A0A7S4S2G1_9DINO (Hypothetical protein n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4S2G1_9DINO) HSP 1 Score: 152 bits (384), Expect = 5.660e-41 Identity = 91/193 (47.15%), Postives = 121/193 (62.69%), Query Frame = 1
Query: 34 VIFLHGSGDTGRGVRDWLNSASGGKFDRAVAELGLGEVVYPTAPERRYTLAGGAPSTVWFDRDRLSPGSRQDRAGVLRSLRQVEDEVRKLEDAGVPRSGVFVGGFSMGGCLALEAL-GAEGLAGRLAGVFSHASFLNDDS----AVFEMTSGSVAQSSRQTPTP-VYVTHGAADGMVKVAWGRATAEKLKAKG 594
+IFLHGSGD G G+RDWL S SGG F+R + G+ +VVYP AP YTL GG P VWFDR L+ + +D AGV RSL QV+ E+ +L +AG+ RS + VGG SMGGCLA+ A GA AG LA + FL DS A E +G+ + + + P +++ HG ADGM+ +W + T E+L+A G
Sbjct: 35 LIFLHGSGDCGAGIRDWLASTSGGDFERRLTAAGV-KVVYPDAPAVPYTLNGGYPQNVWFDRVALAYNAPEDVAGVARSLEQVDAEIDRLIEAGISRSHIAVGGMSMGGCLAMHAAYGAGRHAGALAAAACLSCFLPHDSGLDAACRERLAGAGSGEAGASGAPALFMGHGEADGMINPSWAQLTRERLEACG 226
BLAST of mRNA_Ecto-sp13_S_contig12089.1773.1 vs. uniprot
Match: A0A812WYN6_SYMPI (LYPLAL1 protein n=1 Tax=Symbiodinium pilosum TaxID=2952 RepID=A0A812WYN6_SYMPI) HSP 1 Score: 149 bits (377), Expect = 4.730e-40 Identity = 93/216 (43.06%), Postives = 132/216 (61.11%), Query Frame = 1
Query: 31 AVIFLHGSGDTGRGVRDWLNSASGGKFDRAVAELGLGEVVYPTAPERRYTLAGGAPSTVWFDRDRLSPGSRQDRAGVLRSLRQVEDEVRKLEDAGVPRSGVFVGGFSMGGCLALE-ALGAEGLAGRLAGVFSHASFLNDDSAVFEMTSGSVAQSSRQTPTPVYVTHGAADGMVKVAWGRATAEKLKAKGSFDLTFKEYVELDHELGEEQA---RSF 666
A+IFLHGSGDTG GV+ WL++ SGG F+ ++A G+ +++PTA Y+L GG P TVWFDR ++ + +D AG+ RS+ V+ E+ KL ++G+P S + VGG SMGGC+AL A G AGRL V S ++FL +S S + S QT P+++ HG DGM+++ W RAT +L A G E+ + HEL E+ RSF
Sbjct: 32 ALIFLHGSGDTGEGVQAWLHAVSGGAFEASLAREGI-SMLFPTATMIPYSLIGGMPRTVWFDRVAMAYEAPEDVAGLKRSVELVDKEIDKLVESGIPLSKIGVGGMSMGGCVALHVAYGMGRHAGRLGMVASLSTFLPKESYFDADASRRLTAS--QT-APLFMAHGQDDGMIRIEWARATHSRLLAAGIDCKELLEFPGVQHELCTEEVGLLRSF 243
BLAST of mRNA_Ecto-sp13_S_contig12089.1773.1 vs. uniprot
Match: A0A812M591_9DINO (LYPLAL1 protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812M591_9DINO) HSP 1 Score: 148 bits (374), Expect = 6.620e-40 Identity = 89/216 (41.20%), Postives = 130/216 (60.19%), Query Frame = 1
Query: 31 AVIFLHGSGDTGRGVRDWLNSASGGKFDRAVAELGLGEVVYPTAPERRYTLAGGAPSTVWFDRDRLSPGSRQDRAGVLRSLRQVEDEVRKLEDAGVPRSGVFVGGFSMGGCLALE-ALGAEGLAGRLAGVFSHASFLNDDSAVFEMTSGSVAQSSRQTPTPVYVTHGAADGMVKVAWGRATAEKLKAKGSFDLTFKEYVELDHELGEEQA---RSF 666
A+IFLHGSGDTG GV+ WL++ S G F+ ++A G+ + +PTAP Y+L GGAP TVWFDR ++ + +D G+ RS+ V+ E+ KL +G+P S + VGG SMGGCLAL A G AGRL S ++FL +S + + + + + + P+++ HG DGM+++ W RAT +L A G E+ + HEL E+ RSF
Sbjct: 7 ALIFLHGSGDTGEGVQAWLHAVSDGAFEASLARDGI-ILQFPTAPRIPYSLIGGAPQTVWFDRVAMAYEAPEDVPGLKRSVELVDKEIDKLVHSGIPISKIGVGGMSMGGCLALHVAYGMGRYAGRLGMAASLSTFLPKESC---LDADATRRFTASSSPPLFMAHGQNDGMIRLEWARATHGRLLAAGIAGKELLEFPGVQHELCPEEVALLRSF 218
BLAST of mRNA_Ecto-sp13_S_contig12089.1773.1 vs. uniprot
Match: A0A835ZH59_9STRA (Alpha/Beta hydrolase protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZH59_9STRA) HSP 1 Score: 147 bits (370), Expect = 1.970e-39 Identity = 91/217 (41.94%), Postives = 123/217 (56.68%), Query Frame = 1
Query: 25 RGAVIFLHGSGDTGRGVRDWLNSASGGKFDRAVAELGLGEVVYPTAPERRYTLAGGAPSTVWFDRDRLSPGSRQDRAGVLRSLRQVEDEVRKLEDAGVPRSGVFVGGFSMGGCLALEALGAEGLAGRLAGVFSHASFLNDDSAVFEMTSGSVAQSSRQTPTPVYVTHGAADGMVKVAWGRATAEKLKAKGSFDLTFKEYVELDHELGEEQARSFCFW 675
RG +IFLHGSGDTG GV++WL+ +GG F+R +A G+ +YPTAP R YT+ G VW DR L S D VL S+ VE + +LE+AGV RS V +GGFSMGG +AL+ + A A LAGVFS +SFL+ S ++ +Y HG D MV AW R+TA+ L + G + +T EY L H++ + + W
Sbjct: 1 RGGLIFLHGSGDTGPGVQEWLDYITGGSFERTLAGQGI-LCLYPTAPLRPYTMCQGELRHVWHDRLALDFNSIPDEEHVLESMEIVEGLLEELEEAGVDRSAVVLGGFSMGGGVALQCIAAP-WACHLAGVFSLSSFLHAASPLYAQXXXXXXX--XXXXXXLYTAHGLRDEMVSHAWARSTAQGLTSAG-YAVTHAEYATLGHDMSRAEVEALLQW 212
BLAST of mRNA_Ecto-sp13_S_contig12089.1773.1 vs. uniprot
Match: A0A812WHJ6_9DINO (LYPLAL1 protein n=5 Tax=Symbiodinium TaxID=2949 RepID=A0A812WHJ6_9DINO) HSP 1 Score: 155 bits (393), Expect = 7.790e-39 Identity = 91/208 (43.75%), Postives = 129/208 (62.02%), Query Frame = 1
Query: 34 VIFLHGSGDTGRGVRDWLNSASGGKFDRAVAELGLGEVVYPTAPERRYTLAGGAPSTVWFDRDRLSPGSRQDRAGVLRSLRQVEDEVRKLEDAGVPRSGVFVGGFSMGGCLALE-ALGAEGLAGRLAGVFSHASFLNDDSAVFEMTSGSVAQSSRQTPTPVYVTHGAADGMVKVAWGRATAEKLKAKGSFDLTFKEYVELDHELGEEQ 654
+IFLHGSGDTG GV+ WL++ SGG F+ ++A G+ + +PTA Y+L GG P TVWFDR ++ + +D G+ RS+ V+ E+ KL ++GVP S + VGG SMGGCLAL A G AGRL V S ++FL DS + E A+ +P P+++ HG ADGM+++ W RAT +L A G E+ ++ HEL E+
Sbjct: 976 LIFLHGSGDTGEGVQGWLHAISGGAFEASLAREGIA-MQFPTAARIPYSLIGGMPQTVWFDRVAMAYEAPEDVPGLKRSVELVDKEIDKLVESGVPISKIGVGGMSMGGCLALHVAYGMGRYAGRLGMVASLSTFLPKDSCLDE-----AARRFASSP-PLFMAHGQADGMIRLEWARATHRRLLAAGITSKELLEFPDVQHELCSEE 1176
BLAST of mRNA_Ecto-sp13_S_contig12089.1773.1 vs. uniprot
Match: UPI001BB172A5 (lysophospholipase-like protein 1 isoform X1 n=2 Tax=Lytechinus variegatus TaxID=7654 RepID=UPI001BB172A5) HSP 1 Score: 140 bits (352), Expect = 1.320e-36 Identity = 81/214 (37.85%), Postives = 119/214 (55.61%), Query Frame = 1
Query: 34 VIFLHGSGDTGRGVRDWLNSASGGKFDRAVAELGLGEVVYPTAPERRYTLAGGAPSTVWFDRDRLSPGSRQDRAGVLRSLRQVEDEVRKLEDAGVPRSGVFVGGFSMGGCLALEALGAEGLAGRLAGVFSHASFLNDDSAVFEMTSGSVAQSSRQTPTPVYVTHGAADGMVKVAWGRATAEKLKAKGSFDLTFKEYVELDHELGEEQARSFCFW 675
++FLHGSGDT G+++WL S G F L ++++P+AP R YT GAPSTVWFDR R++P +D + ++ ++ D G+PR+ + VGGFSMGGCLAL A +AGVF+ +SFLND+S V++ +A S + P P++ HG D +V WG +T + L K F Y L HE+ +++ W
Sbjct: 22 IVFLHGSGDTSEGLQEWLFSILGKSFS-----LPHSKIIFPSAPSRPYTPMNGAPSTVWFDRKRIAPNVPEDLESIDPMCEEIGKVIQLEVDQGIPRNKIIVGGFSMGGCLALHV--AYRFQQEIAGVFALSSFLNDNSKVYK----DLASSDCRRP-PLFQCHGKVDPLVLYEWGESTKDLL-IKAGVMCQFHSYPRLYHEMNKDELDKLQAW 222
BLAST of mRNA_Ecto-sp13_S_contig12089.1773.1 vs. uniprot
Match: A0A7M7T4Z4_STRPU (Palmitoyl-protein hydrolase n=2 Tax=Strongylocentrotus purpuratus TaxID=7668 RepID=A0A7M7T4Z4_STRPU) HSP 1 Score: 138 bits (347), Expect = 7.280e-36 Identity = 81/215 (37.67%), Postives = 121/215 (56.28%), Query Frame = 1
Query: 31 AVIFLHGSGDTGRGVRDWLNSASGGKFDRAVAELGLGEVVYPTAPERRYTLAGGAPSTVWFDRDRLSPGSRQDRAGVLRSLRQVEDEVRKLEDAGVPRSGVFVGGFSMGGCLALEALGAEGLAGRLAGVFSHASFLNDDSAVFEMTSGSVAQSSRQTPTPVYVTHGAADGMVKVAWGRATAEKLKAKGSFDLTFKEYVELDHELGEEQARSFCFW 675
++IFLHGSGDT G+++WL S G KF L +V++P+AP R YT GAPSTVWFDR ++S + +D V ++ +++ D G+PR+ + VGGFSMGGCLAL A L GVF+ ++FLN++S V++ +A + P P++ HG D +V WG T ++L G F+ Y L HE+ +++ W
Sbjct: 21 SIIFLHGSGDTSEGLQEWLFSILGRKFC-----LPHSKVIFPSAPLRPYTPMNGAPSTVWFDRKQISQNAPEDLESVDPMCEEISKVIQQEVDQGIPRNKIIVGGFSMGGCLALHV--AYRFQRELGGVFALSAFLNNNSKVYQ----DLASPDSRRP-PLFQCHGQVDPLVLYEWGETTKDQLTRAG-VTCQFQRYPRLYHEMNKDELDKLQAW 222
BLAST of mRNA_Ecto-sp13_S_contig12089.1773.1 vs. uniprot
Match: UPI001B88763C (lysophospholipase-like protein 1 n=1 Tax=Gigantopelta aegis TaxID=1735272 RepID=UPI001B88763C) HSP 1 Score: 132 bits (333), Expect = 8.990e-34 Identity = 82/216 (37.96%), Postives = 121/216 (56.02%), Query Frame = 1
Query: 28 GAVIFLHGSGDTGRGVRDWLNSASGGKFDRAVAELGLGEVVYPTAPERRYTLAGGAPSTVWFDRDRLSPGSRQDRAGVLRSLRQVEDEVRKLEDAGVPRSGVFVGGFSMGGCLALEALGAEGLAGRLAGVFSHASFLNDDSAVFEMTSGSVAQSSRQTPTPVYVTHGAADGMVKVAWGRATAEKLKAKGSFDLTFKEYVELDHELGEEQARSFCFW 675
G+VIFLHGSGDTG G+R WL S G +F A L V++PTAP R Y+ GGA STVWFDRD++SP + + + + + ++V + G+P++ + +GGFSMGGCLAL A +AGVF+ +SFL +S+V++ + + P++ HG D +V WG + +KLK+ G + F L HEL ++ W
Sbjct: 23 GSVIFLHGSGDTGPGIRQWLQSVLGEEF--AFPHL---RVIFPTAPPRPYSPMGGAVSTVWFDRDQISPFTAETES-LTTACKEVSHLIEAEVKNGIPKNRIVIGGFSMGGCLALHL--AYRFHKEIAGVFALSSFLQTESSVYKSI-----KEDGSSLVPLFQFHGKKDCLVMYEWGEDSFQKLKSLG-VEGQFHTLSHLQHELNRKEIELLKQW 224 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12089.1773.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig12089.1773.1 >prot_Ecto-sp13_S_contig12089.1773.1 ID=prot_Ecto-sp13_S_contig12089.1773.1|Name=mRNA_Ecto-sp13_S_contig12089.1773.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=307bp MQSHAQRRRGAVIFLHGSGDTGRGVRDWLNSASGGKFDRAVAELGLGEVVback to top mRNA from alignment at Ecto-sp13_S_contig12089:781..4010+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig12089.1773.1 ID=mRNA_Ecto-sp13_S_contig12089.1773.1|Name=mRNA_Ecto-sp13_S_contig12089.1773.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3230bp|location=Sequence derived from alignment at Ecto-sp13_S_contig12089:781..4010+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig12089:781..4010+ >mRNA_Ecto-sp13_S_contig12089.1773.1 ID=mRNA_Ecto-sp13_S_contig12089.1773.1|Name=mRNA_Ecto-sp13_S_contig12089.1773.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=921bp|location=Sequence derived from alignment at Ecto-sp13_S_contig12089:781..4010+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |