mRNA_Ecto-sp13_S_contig12088.1772.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig12088.1772.1 vs. uniprot
Match: A0A6H5JE67_9PHAE (cGMP-dependent protein kinase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JE67_9PHAE) HSP 1 Score: 527 bits (1358), Expect = 1.560e-174 Identity = 362/443 (81.72%), Postives = 371/443 (83.75%), Query Frame = 1
Query: 1 MLCGTHPFDLDSNSEEEEVIKRVRSGVVPLLELGSGVSDSAKDLISRRVPATVYERLTAEEMMQHPWIQ-----GRTAPQRPLKGSDARLARFREVLSQKLETGVVSLLVEGAVAEGNSRNQYTYNPYGGHMDSNSNSRXXXXXXXTGDAEGSRGVVEAVDVVKNAYRAFDRRGTGRISATDIAGVLEEHSASVSEDERRAIDEAVSVARNFRRPSGLRPPVLPHGHVESHPTTVTGE---GDSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIAARERLSTTAL-----SLPPTPPAATSILGTTXXXXXXXXXXXXXXXXXXXXXXXXPLSTAMEDKEYEPKEAGPGAAQEEDGLDMSDFEDLLLDHLKTTEYPPGEFVFREGDAPDGGLYFIVEGRVDVLVNSAGWQSSGAGDEGGSSPDTTNADSQPPTPTHHAHTR 1290
MLCG HPFDLDSNSEEEEVIKRVRSGVVPLLELG GVSDSAKDLISRRV A V E E + GRTAPQRPLKGSDARLARFREVLSQKLETGVVS+LVEGAVAEGNS++QYTYNPYGG+M N+ XXXXXXX D EGSR VVEAVDVVKNAYRAFDRRGTGRISA DIAGVLEEHSASVSEDERRAIDEAVSVARNFRRPSG RPPVLPH HVES T TGE G+ G XXXXXXXXXXXXXXXXXXXXXXXXXXXXX S PTPPAATSILGT XXXXXXXXXXXXXXXXXXXX PLSTAMEDKE EP+EAG GA +EEDGLDMSDFEDLLLDHLKTTEY PGEFVFREGDAPDGGLYFIVEGRVDVLVNSAGWQSSGAGDEGGSSPDTTNADSQPPTP HHAHTR
Sbjct: 425 MLCGAHPFDLDSNSEEEEVIKRVRSGVVPLLELGGGVSDSAKDLISRRV-AVVDEGPEGEADSRGDDAASLDTGGRTAPQRPLKGSDARLARFREVLSQKLETGVVSMLVEGAVAEGNSQDQYTYNPYGGYM-GNNXXXXXXXXXXXXDGEGSRVVVEAVDVVKNAYRAFDRRGTGRISAMDIAGVLEEHSASVSEDERRAIDEAVSVARNFRRPSGSRPPVLPHSHVESPATAATGEDARGNGGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSQQPTPPAATSILGTATXXXXXXXXXXXXXXXXXXXXTLAPLSTAMEDKEIEPEEAGTGATEEEDGLDMSDFEDLLLDHLKTTEYTPGEFVFREGDAPDGGLYFIVEGRVDVLVNSAGWQSSGAGDEGGSSPDTTNADSQPPTPAHHAHTR 865
BLAST of mRNA_Ecto-sp13_S_contig12088.1772.1 vs. uniprot
Match: D7G5Y1_ECTSI (cGMP-dependent protein kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5Y1_ECTSI) HSP 1 Score: 286 bits (733), Expect = 1.200e-84 Identity = 194/430 (45.12%), Postives = 200/430 (46.51%), Query Frame = 1
Query: 1 MLCGTHPFDLDSNSEEEEVIKRVRSGVVPLLELGSGVSDSAKDLISRRVPATVYERLTAEEMMQHPWIQGRTAPQRPLKGSDARLARFREVLSQKLETGVVSLLVEGAVAEGNSRNQYTYNPYGGHMDSNSNSRXXXXXXXTGDAEGSRGVVEAVDVVKNAYRAFDRRGTGRISATDIAGVLEEHSASVSEDERRAIDEAVSVARNFRRPSGLRPPVLPHGHVESHPTTVTGEGDSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIAARERLSTTALSLPPTPPAATSILGTTXXXXXXXXXXXXXXXXXXXXXXXXPLSTAMEDKEYEPKEAGPGAAQEEDGLDMSDFEDLLLDHLKTTEYPPGEFVFREGDAPDGGLYFIVEGRVDVLVNSAGWQSSGAGDEGGSSPDTTNADSQPPTPTHHAHTR 1290
MLCGTHPFDLDSNSEEEEVIKRVRSGVVPLLELG G+SDSAKDLISR + ERLTAEEMMQHPWIQGRTAPQRPLKGSDARLARFREVLSQKLETGVVS+LVEGAVAE DIAGVLEEHSASVSEDERRAIDEAVSVARNFRRPSG + + P G EGDAPDGGLYFIVEGRVDVLVNSAGWQSSGAGDEGGSSP TTNADS+PPTP HHAHTR
Sbjct: 420 MLCGTHPFDLDSNSEEEEVIKRVRSGVVPLLELGRGISDSAKDLISRLLTRDPKERLTAEEMMQHPWIQGRTAPQRPLKGSDARLARFREVLSQKLETGVVSMLVEGAVAE-----------------------------------------------------------------DIAGVLEEHSASVSEDERRAIDEAVSVARNFRRPSGSKTRLRPQG-------------------------------------------------------------------------------------------------------------------------------------------------------EGDAPDGGLYFIVEGRVDVLVNSAGWQSSGAGDEGGSSPATTNADSRPPTPIHHAHTR 633
BLAST of mRNA_Ecto-sp13_S_contig12088.1772.1 vs. uniprot
Match: A0A836CF38_9STRA (cGMP-dependent protein kinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CF38_9STRA) HSP 1 Score: 151 bits (381), Expect = 4.030e-36 Identity = 86/210 (40.95%), Postives = 126/210 (60.00%), Query Frame = 1
Query: 1 MLCGTHPFDLDSNSEEEEVIKRVRSGVVPLLELGSGVSDSAKDLISRRVPATVYERLTAEEMMQHPWIQGRTAPQRPLKGSDARLARFREVLSQKLETGVVSLLVEGAVAEGNSRNQYTYNPYGGHMDSNSNSRXXXXXXXTGDAEGSRGVVEAVDVVKNAYRAFDRRGTGRISATDIAGVLEEHSASVSEDERRAIDEAVSVARNFRRP 630
ML G HPFD + ++EV++R+R+ VPL LG VSDSAKDLI R + +RLTA++M++HPW+QGRTA + PL+GSD RLA+F+EVL QKLE G +S++V +++E + + GG+ G V EAVD ++ AY AFD+ G G++S DI V+ E +++S +E A+ AVS + + P
Sbjct: 186 MLSGRHPFDPAGTATDQEVVERIRTMDVPLDGLGDDVSDSAKDLIGRLMAKDPADRLTAQQMLEHPWVQGRTALEVPLEGSDTRLAQFQEVLRQKLEDGFLSVMVARSMSESPTCTGFA----GGYT--------------VGGGLDKPDVGEAVDAMRRAYEAFDKGGKGKVSVKDIVRVMAEQGSTLSAEEGVALQAAVSARNSNKHP 377
BLAST of mRNA_Ecto-sp13_S_contig12088.1772.1 vs. uniprot
Match: D8LCM8_ECTSI (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCM8_ECTSI) HSP 1 Score: 134 bits (338), Expect = 2.320e-35 Identity = 65/73 (89.04%), Postives = 67/73 (91.78%), Query Frame = 1
Query: 973 MEDKEYEPKEAGPGAAQEEDGLDMSDFEDLLLDHLKTTEYPPGEFVFREGDAPDGGLYFIVEGRVDVLVNSAG 1191
ME+ EYEP+EA A EEDGLDMSDFEDLLLDHLKTTEYPPGEFVFREGDAPDGGLYFIVEGRVDVLVNSAG
Sbjct: 1 MEEHEYEPEEAERAAVGEEDGLDMSDFEDLLLDHLKTTEYPPGEFVFREGDAPDGGLYFIVEGRVDVLVNSAG 73
BLAST of mRNA_Ecto-sp13_S_contig12088.1772.1 vs. uniprot
Match: A0A7S4APK1_9STRA (cGMP-dependent protein kinase n=6 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4APK1_9STRA) HSP 1 Score: 96.3 bits (238), Expect = 1.510e-17 Identity = 73/240 (30.42%), Postives = 114/240 (47.50%), Query Frame = 1
Query: 1 MLCGTHPFDLDSNSEEEEVIKRVRSGVVPLLE--LGSGVSDSAKDLISRRVPATVYERLTAEEMMQHPWIQGRTAPQRPLKGSDARLARFREVLSQKLETGVVSLLVEGA-----VAEGNSRNQYTYNPYGGHMDSNSNSRXXXXXXXTGDAEGSRGVVEAVDVVKNAYRAFDRRGTGRISATDIAGVLEEHSASVSEDER-------RAIDEAVSVARNFRRPSGLRPPVLPHGHVESH 678
ML G HPFD++ + +EEV ++ +P ++ +S+SAKDLI R + +R+TA E++ HPW+QG TA ++ SD RL++F++ L KLE V ++LV ++E RN T N GS G V ++K+A+ AFD G G ++ DI V+ E + V E + + D VS++ SG++ P GH H
Sbjct: 486 MLMGFHPFDINCDRSDEEVAAAIQDNPLPPMDDVYVGYLSESAKDLIRRLMEPDPTKRMTAYELLHHPWVQGETATTEVIEDSDKRLSKFQD-LRYKLEASVFAVLVNQGHQNLTMSEAKRRNSVTKN-------------------------GSSGDVS---IMKSAFDAFDGDGKGYVTGADIGKVVTERTGEVIETDDANEYLKVKNKDLEVSLSNFSNLFSGMKHKHFPRGHYIFH 696
BLAST of mRNA_Ecto-sp13_S_contig12088.1772.1 vs. uniprot
Match: A0A7S2EV06_9STRA (cGMP-dependent protein kinase n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2EV06_9STRA) HSP 1 Score: 92.8 bits (229), Expect = 1.930e-16 Identity = 60/184 (32.61%), Postives = 91/184 (49.46%), Query Frame = 1
Query: 1 MLCGTHPFDLDSNSEEEEVIKRVRSGVVPLL--ELGSGVSDSAKDLISRRVPATVYERLTAEEMMQHPWIQGRTAPQRPLKGSDARLARFREVLSQKLETGVVSLLVEGAVAEGNSRNQYTYNPYGGHMDSNSNSRXXXXXXXTGDAEGSRGVVEAVDVVKNAYRAFDRRGTGRISATDIAGVL 546
ML G HPFD+ S +EE+ +R++ P L E ++ SA DLI R + ER+TA EM++HPW++G TA + GSD +L+RF+E L KLE G+ +L+ GN + N + D G +G +++K A+ FD G G +A D+ V+
Sbjct: 365 MLVGVHPFDIGGMSTDEEIEERIKKDPTPPLGPEFTKHLTPSAVDLIKRLMTKDPAERMTAHEMLRHPWVRGETATTTTIAGSDKKLSRFKE-LRNKLEAGIFHVLIN----HGNREHD--------------NFISEAKQVESPDDSGLQG--STTNIMKRAFEVFDSEGKGFANADDLGRVV 527
BLAST of mRNA_Ecto-sp13_S_contig12088.1772.1 vs. uniprot
Match: A0A1Z5K2I9_FISSO (cGMP-dependent protein kinase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K2I9_FISSO) HSP 1 Score: 92.0 bits (227), Expect = 3.380e-16 Identity = 75/245 (30.61%), Postives = 124/245 (50.61%), Query Frame = 1
Query: 1 MLCGTHPFDLDSNSEEEEVIKRVRSGVVPLLE--LGSGVSDSAKDLISRRVPATVYERLTAEEMMQHPWIQGRTAPQRPLKGSDARLARFREVLSQKLETGVVSLLV----EGA-VAEGNSRNQYTYNPYGGHMDSNSNSRXXXXXXXTGDAEGSRGVVEAVDVVKNAYRAFDRRGTGRISATDIAGVLEEHSASV--SEDERRAI----DEAVSVARNFRRP------SGLRPPVLPHGHVESH 678
ML G HPFDL S +EE+ +R+++ P L+ L +S+SA DLI + + +RLTA EM+QHPW++G TA + ++ SD +L+RF+++ S KLE G+ ++LV EGA ++E S+ H DS+ D ++G ++++ A+ FD G G +++ D++ + E + ++ S D + + + S A N SGL P GH H
Sbjct: 337 MLTGVHPFDLRGLSTDEEIEERIKADPSPPLDHHLVGHLSESAIDLIKKLMEKDPNKRLTAYEMLQHPWVRGETALKEKIQDSDKKLSRFKDLRS-KLEAGMFAVLVSQGNEGATMSEARSK----------HDDSD-------------DRRDNKGTH---NIMQRAFAIFDAEGRGFVTSDDLSRIASERTGTLISSSDTKEFLATQSGDISSAASNLSLSQFNKLFSGLHQKHFPRGHYIFH 554
BLAST of mRNA_Ecto-sp13_S_contig12088.1772.1 vs. uniprot
Match: A0A7S2XLN2_9STRA (cGMP-dependent protein kinase n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XLN2_9STRA) HSP 1 Score: 87.8 bits (216), Expect = 8.340e-15 Identity = 57/190 (30.00%), Postives = 93/190 (48.95%), Query Frame = 1
Query: 1 MLCGTHPFDLDSNSEEEEVIKRVRSGVVPLL--ELGSGVSDSAKDLISRRVPATVYERLTAEEMMQHPWIQGRTAPQRPLKGSDARLARFREVLSQKLETGVVSLLVEGAVAEGNSRNQYTYNPYGGHMDSNSNSRXXXXXXXTGDAEGSRGVVEAVDVVKNAYRAFDRRGTGRISATDIAGVLEEHSAS 564
M+ G HPFD+ S ++E+ +R++ P + E +S SA DLI + + A +R+TA+EM+QHPWI G TA + SD RL+RF++ L LE G+ ++LV GH + + ++G ++K A+ AFD G G +++ D+ V+ E + S
Sbjct: 381 MMTGVHPFDVRGMSTDDEIEERIKRDPTPPMGPEFTGHLSSSAIDLIKKLMAADPNDRITADEMLQHPWILGETATTDKMIDSDKRLSRFKD-LRNTLEAGIFAVLVSK-----------------GHRGMSLSESNRDSVEQAYKSKGREESDATSHIMKKAFEAFDLDGKGFVTSEDLGRVVSEATGS 552
BLAST of mRNA_Ecto-sp13_S_contig12088.1772.1 vs. uniprot
Match: A0A7S2HLU5_9STRA (cGMP-dependent protein kinase (Fragment) n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2HLU5_9STRA) HSP 1 Score: 87.0 bits (214), Expect = 1.320e-14 Identity = 56/184 (30.43%), Postives = 92/184 (50.00%), Query Frame = 1
Query: 1 MLCGTHPFDLDSNSEEEEVIKRVRSGVVPLL--ELGSGVSDSAKDLISRRVPATVYERLTAEEMMQHPWIQGRTAPQRPLKGSDARLARFREVLSQKLETGVVSLLVEGAVAEGNSRNQYTYNPYGGHMDSNSNSRXXXXXXXTGDAEGSRGVVEAVDVVKNAYRAFDRRGTGRISATDIAGVL 546
ML G HPFD+ S +EE+ +R+ + P L E ++ SA DLI + + +R+TA+EM++HPW++G TA + SD +L+RF++ L KLE G+ +LV GN + + + + +GD S +++K A+ FD G G +A D+ V+
Sbjct: 315 MLVGVHPFDVAGMSTDEEIEERIMADPTPPLGPEYTGHLTPSAVDLIQKLMTQDPDKRMTADEMLRHPWVRGETATTTKMADSDKKLSRFKD-LRHKLEAGIFHVLVN----HGNREHNISEARIAAEDEDRRSDGGGVFGSKSGDPRTS-----PTNIMKRAFEVFDSEGKGFATADDLGRVI 488
BLAST of mRNA_Ecto-sp13_S_contig12088.1772.1 vs. uniprot
Match: A0A7S2EQ23_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EQ23_TRICV) HSP 1 Score: 80.5 bits (197), Expect = 1.850e-14 Identity = 39/93 (41.94%), Postives = 61/93 (65.59%), Query Frame = 1
Query: 1 MLCGTHPFDLDSNSEEEEVIKRVRSGVVPLLE---LGSGVSDSAKDLISRRVPATVYERLTAEEMMQHPWIQGRTAPQRPLKGSDARLARFRE 270
MLCG HPFDLD + +EE+ +R+++ P LE +S SA DL+S+ + +R++A EM+QHPW++G TA ++GS RL++FR+
Sbjct: 26 MLCGAHPFDLDGTASDEEIERRIKTIRRPPLEGSEFTEHLSPSAIDLLSKLMAEDPKQRISANEMLQHPWVRGDTARTNIMEGSAKRLSKFRQ 118 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12088.1772.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig12088.1772.1 >prot_Ecto-sp13_S_contig12088.1772.1 ID=prot_Ecto-sp13_S_contig12088.1772.1|Name=mRNA_Ecto-sp13_S_contig12088.1772.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=431bp MLCGTHPFDLDSNSEEEEVIKRVRSGVVPLLELGSGVSDSAKDLISRRVPback to top mRNA from alignment at Ecto-sp13_S_contig12088:423..4516- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig12088.1772.1 ID=mRNA_Ecto-sp13_S_contig12088.1772.1|Name=mRNA_Ecto-sp13_S_contig12088.1772.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4094bp|location=Sequence derived from alignment at Ecto-sp13_S_contig12088:423..4516- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig12088:423..4516- >mRNA_Ecto-sp13_S_contig12088.1772.1 ID=mRNA_Ecto-sp13_S_contig12088.1772.1|Name=mRNA_Ecto-sp13_S_contig12088.1772.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1293bp|location=Sequence derived from alignment at Ecto-sp13_S_contig12088:423..4516- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |