mRNA_Ecto-sp13_S_contig12033.1737.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig12033.1737.1 vs. uniprot
Match: A0A6H5L402_9PHAE (MIT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L402_9PHAE) HSP 1 Score: 168 bits (426), Expect = 1.680e-51 Identity = 85/85 (100.00%), Postives = 85/85 (100.00%), Query Frame = 3
Query: 180 MDSQFIPKAIDMVKDAIAADNNQDYETALGLYKKSLEYFMTGLKYEPNPMAKATIMKRVEGYMKRAETLKEIVEEQAAAKNGMGK 434
MDSQFIPKAIDMVKDAIAADNNQDYETALGLYKKSLEYFMTGLKYEPNPMAKATIMKRVEGYMKRAETLKEIVEEQAAAKNGMGK
Sbjct: 1 MDSQFIPKAIDMVKDAIAADNNQDYETALGLYKKSLEYFMTGLKYEPNPMAKATIMKRVEGYMKRAETLKEIVEEQAAAKNGMGK 85
BLAST of mRNA_Ecto-sp13_S_contig12033.1737.1 vs. uniprot
Match: A0A836CL36_9STRA (Katanin like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CL36_9STRA) HSP 1 Score: 111 bits (278), Expect = 4.540e-26 Identity = 55/80 (68.75%), Postives = 65/80 (81.25%), Query Frame = 3
Query: 180 MDSQFIPKAIDMVKDAIAADNNQDYETALGLYKKSLEYFMTGLKYEPNPMAKATIMKRVEGYMKRAETLKEIVEEQAAAK 419
MD+ F+PKAI V +AIAADN Q+YE AL LY+K+LEYFMTGLKYE NP K TIM RVEGYMKRAE L+ I+++QA AK
Sbjct: 1 MDNSFLPKAISTVTEAIAADNAQEYEQALALYRKALEYFMTGLKYEKNPATKQTIMDRVEGYMKRAELLRGILDKQAEAK 80
BLAST of mRNA_Ecto-sp13_S_contig12033.1737.1 vs. uniprot
Match: A0A6A5A1Y5_9STRA (MIT domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5A1Y5_9STRA) HSP 1 Score: 98.6 bits (244), Expect = 6.670e-24 Identity = 48/80 (60.00%), Postives = 62/80 (77.50%), Query Frame = 3
Query: 180 MDSQFIPKAIDMVKDAIAADNNQDYETALGLYKKSLEYFMTGLKYEPNPMAKATIMKRVEGYMKRAETLKEIVEEQAAAK 419
MD++FIP+AI +V AI D N++YE A LY++SLE+FM G+KYE NP +KA IMKRVEGYM RAE L+E++E QA K
Sbjct: 1 MDNKFIPQAIQLVTQAIQEDTNKNYEAAFKLYQQSLEHFMIGVKYEKNPTSKAIIMKRVEGYMTRAEQLRELLEGQAKPK 80
BLAST of mRNA_Ecto-sp13_S_contig12033.1737.1 vs. uniprot
Match: A0A397F2K9_9STRA (MIT domain-containing protein (Fragment) n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397F2K9_9STRA) HSP 1 Score: 98.6 bits (244), Expect = 6.610e-23 Identity = 48/80 (60.00%), Postives = 62/80 (77.50%), Query Frame = 3
Query: 180 MDSQFIPKAIDMVKDAIAADNNQDYETALGLYKKSLEYFMTGLKYEPNPMAKATIMKRVEGYMKRAETLKEIVEEQAAAK 419
MD++FIP+AI +V AI D N++YE A LY++SLE+FM G+KYE NP +KA IMKRVEGYM RAE L+E++E QA K
Sbjct: 1 MDNKFIPQAIQLVTQAIQEDTNKNYEAAFKLYQQSLEHFMIGVKYEKNPTSKAIIMKRVEGYMTRAEQLRELLEGQAKPK 80
BLAST of mRNA_Ecto-sp13_S_contig12033.1737.1 vs. uniprot
Match: A0A7S3K4J8_9STRA (Vesicle-fusing ATPase n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K4J8_9STRA) HSP 1 Score: 100 bits (250), Expect = 4.060e-22 Identity = 49/86 (56.98%), Postives = 67/86 (77.91%), Query Frame = 3
Query: 186 SQFIPKAIDMVKDAIAADNNQDYETALGLYKKSLEYFMTGLKYEPNPMAKATIMKRVEGYMKRAETLKEIVEEQAAAKNGMGKGGG 443
+ FI + +++V +AIAADN ++YE ALGLYK++LE FMTG+KYE NP A+ TI++RVEGYMKRAE LK ++E++ AA G GG
Sbjct: 4 NNFIKQGVEVVSEAIAADNAEEYEKALGLYKRALEVFMTGVKYEKNPAARDTILQRVEGYMKRAEDLKGVIEQRRAAGTSSGGRGG 89
BLAST of mRNA_Ecto-sp13_S_contig12033.1737.1 vs. uniprot
Match: A0A7S2F1P6_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2F1P6_9STRA) HSP 1 Score: 99.8 bits (247), Expect = 1.040e-21 Identity = 51/84 (60.71%), Postives = 60/84 (71.43%), Query Frame = 3
Query: 192 FIPKAIDMVKDAIAADNNQDYETALGLYKKSLEYFMTGLKYEPNPMAKATIMKRVEGYMKRAETLKEIVEEQAAAKNGMGKGGG 443
FI + I +V AI ADN Q+YE AL Y+KSLEYFMTGLK+E NP K TI+KRVEGYMKRAE LK ++ + A K G GGG
Sbjct: 6 FIQQGIQIVTQAIEADNAQEYEKALAAYRKSLEYFMTGLKHEKNPAVKETILKRVEGYMKRAEDLKNVLNDTAPPKRGGSPGGG 89
BLAST of mRNA_Ecto-sp13_S_contig12033.1737.1 vs. uniprot
Match: F0XVT7_AURAN (Vesicle-fusing ATPase n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XVT7_AURAN) HSP 1 Score: 98.6 bits (244), Expect = 2.140e-21 Identity = 46/78 (58.97%), Postives = 64/78 (82.05%), Query Frame = 3
Query: 186 SQFIPKAIDMVKDAIAADNNQDYETALGLYKKSLEYFMTGLKYEPNPMAKATIMKRVEGYMKRAETLKEIVEEQAAAK 419
+ FI + I++V +AI AD ++DYE AL LYK++LE FMTG+KYE NP A+ATI++RV+GYMKRAE LK+++E+Q AK
Sbjct: 4 TNFIKQGIEVVSEAIQADKDEDYERALQLYKRALEVFMTGVKYEKNPAARATILQRVDGYMKRAEDLKDVLEKQRQAK 81
BLAST of mRNA_Ecto-sp13_S_contig12033.1737.1 vs. uniprot
Match: A0A662XAV8_9STRA (MIT domain-containing protein (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XAV8_9STRA) HSP 1 Score: 94.4 bits (233), Expect = 3.160e-21 Identity = 45/83 (54.22%), Postives = 64/83 (77.11%), Query Frame = 3
Query: 171 SSVMDSQFIPKAIDMVKDAIAADNNQDYETALGLYKKSLEYFMTGLKYEPNPMAKATIMKRVEGYMKRAETLKEIVEEQAAAK 419
S M+++FIP+AI++V AI DN+++Y+ A LYKK+LE+FM G+KYE NP +K IMKRVEGYM RAE L+ ++E++ A K
Sbjct: 11 SGAMENKFIPQAIEIVTQAIHEDNSKNYQEAFRLYKKALEHFMVGVKYEKNPTSKEIIMKRVEGYMTRAEQLRGMLEKENAPK 93
BLAST of mRNA_Ecto-sp13_S_contig12033.1737.1 vs. uniprot
Match: A0A7S2F3D5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2F3D5_9STRA) HSP 1 Score: 95.1 bits (235), Expect = 3.260e-21 Identity = 49/86 (56.98%), Postives = 61/86 (70.93%), Query Frame = 3
Query: 192 FIPKAIDMVKDAIAADNNQDYETALGLYKKSLEYFMTGLKYEPNPMAKATIMKRVEGYMKRAETLKEIVEEQAAAKNGMGKGGGGG 449
FI + I++V AI ADN QDYE+AL Y+KSLEYFMTGLK+E N K TI+ RVEGYM+RAE LK +++EQ + G G GG
Sbjct: 10 FIKQGIEIVTQAIEADNAQDYESALAKYRKSLEYFMTGLKHEKNKSVKDTILNRVEGYMQRAEVLKGVIDEQRQGPSKKGDGSSGG 95
BLAST of mRNA_Ecto-sp13_S_contig12033.1737.1 vs. uniprot
Match: A0A024TRV6_9STRA (Uncharacterized protein n=12 Tax=Saprolegniaceae TaxID=4764 RepID=A0A024TRV6_9STRA) HSP 1 Score: 97.8 bits (242), Expect = 5.290e-21 Identity = 48/80 (60.00%), Postives = 61/80 (76.25%), Query Frame = 3
Query: 180 MDSQFIPKAIDMVKDAIAADNNQDYETALGLYKKSLEYFMTGLKYEPNPMAKATIMKRVEGYMKRAETLKEIVEEQAAAK 419
MD++FIP+AI +V AI D N++YE A LYK+SLE+FM G+KYE NP +K IMKRVEGYM RAE L+E++E QA K
Sbjct: 1 MDNKFIPQAIQLVTQAIQEDTNKNYEAAFKLYKQSLEHFMIGVKYEKNPTSKEIIMKRVEGYMTRAEQLREMLEGQAKPK 80 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12033.1737.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig12033.1737.1 >prot_Ecto-sp13_S_contig12033.1737.1 ID=prot_Ecto-sp13_S_contig12033.1737.1|Name=mRNA_Ecto-sp13_S_contig12033.1737.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=92bp MDSQFIPKAIDMVKDAIAADNNQDYETALGLYKKSLEYFMTGLKYEPNPMback to top mRNA from alignment at Ecto-sp13_S_contig12033:355..1762- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig12033.1737.1 ID=mRNA_Ecto-sp13_S_contig12033.1737.1|Name=mRNA_Ecto-sp13_S_contig12033.1737.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1408bp|location=Sequence derived from alignment at Ecto-sp13_S_contig12033:355..1762- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig12033:355..1762- >mRNA_Ecto-sp13_S_contig12033.1737.1 ID=mRNA_Ecto-sp13_S_contig12033.1737.1|Name=mRNA_Ecto-sp13_S_contig12033.1737.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=276bp|location=Sequence derived from alignment at Ecto-sp13_S_contig12033:355..1762- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |