mRNA_Ecto-sp13_S_contig12031.1736.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
|
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig12031.1736.1 vs. uniprot
Match: D8LTV6_ECTSI (PPM-type phosphatase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTV6_ECTSI) HSP 1 Score: 335 bits (860), Expect = 1.580e-106 Identity = 170/175 (97.14%), Postives = 170/175 (97.14%), Query Frame = 2
Query: 2 RHHGMVTWEGFECSRGLQIEGTGVYRINGSLAVARAIGDIDYRPWLSAEVEIKTIDLKRETDQFVILASDGLWDVMSSEEAVQYVHAVMGGAMGSGKEGDKWSGDGGDKAGGSGAEADKPPHMTLVNWTQSYAEDRGMIRAATMLRKKKMAGYLMEEALRRGSTDNTTVAIVWLQ 526
RH GMVTWEGFECSRGLQIEGTGVYRINGSLAVARAIGDIDYRPWLSAEVEIKTIDLKRETDQFVILASDGLWDVMSSEEAVQYVHAVMGGAMGSGKEGDKWSG GDKAGGSGAEA KPPHMTLVNWTQSYAEDRGMIRAATMLRKKKMAGYL EEALRRGSTDNTTVAIVWLQ
Sbjct: 186 RHDGMVTWEGFECSRGLQIEGTGVYRINGSLAVARAIGDIDYRPWLSAEVEIKTIDLKRETDQFVILASDGLWDVMSSEEAVQYVHAVMGGAMGSGKEGDKWSGGVGDKAGGSGAEAGKPPHMTLVNWTQSYAEDRGMIRAATMLRKKKMAGYLTEEALRRGSTDNTTVAIVWLQ 360
BLAST of mRNA_Ecto-sp13_S_contig12031.1736.1 vs. uniprot
Match: A0A6H5KKR9_9PHAE (PPM-type phosphatase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKR9_9PHAE) HSP 1 Score: 342 bits (877), Expect = 1.870e-106 Identity = 172/175 (98.29%), Postives = 172/175 (98.29%), Query Frame = 2
Query: 2 RHHGMVTWEGFECSRGLQIEGTGVYRINGSLAVARAIGDIDYRPWLSAEVEIKTIDLKRETDQFVILASDGLWDVMSSEEAVQYVHAVMGGAMGSGKEGDKWSGDGGDKAGGSGAEADKPPHMTLVNWTQSYAEDRGMIRAATMLRKKKMAGYLMEEALRRGSTDNTTVAIVWLQ 526
RH GMVTWEGFECSRGLQIEGTGVYRINGSLAVARAIGDIDYRPWLSAEVEIKTIDLKRETDQFVILASDGLWDVMSSEEAVQYVHAVMGGAMGSGKEGDKWSG GGDKAGGSGAEADKPPHMTLVNWTQSYAEDRGMIRAATMLRKKKMAGYL EEALRRGSTDNTTVAIVWLQ
Sbjct: 380 RHRGMVTWEGFECSRGLQIEGTGVYRINGSLAVARAIGDIDYRPWLSAEVEIKTIDLKRETDQFVILASDGLWDVMSSEEAVQYVHAVMGGAMGSGKEGDKWSGGGGDKAGGSGAEADKPPHMTLVNWTQSYAEDRGMIRAATMLRKKKMAGYLTEEALRRGSTDNTTVAIVWLQ 554
BLAST of mRNA_Ecto-sp13_S_contig12031.1736.1 vs. uniprot
Match: A0A835Z7U5_9STRA (Phosphatase 2C-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7U5_9STRA) HSP 1 Score: 182 bits (463), Expect = 3.780e-48 Identity = 97/172 (56.40%), Postives = 123/172 (71.51%), Query Frame = 2
Query: 11 GMVTWEGFECSRGLQIEGTGVYRINGSLAVARAIGDIDYRPWLSAEVEIKTIDLKRETDQFVILASDGLWDVMSSEEAVQYVHAVMGGAMGSGKEGDKWSGDGGDKAGGSGAEADKPPHMTLVNWTQSYAEDRGMIRAATMLRKKKMAGYLMEEALRRGSTDNTTVAIVWLQ 526
G V W GF G IEGTGVYRING+LAVARAIGD RP++S E EI+++ + E DQF+I+A+DGLWDVM+S+E VQYV AVMGGAMG+ +EG+ G +D+P M L +WTQ YA+DRGMIRAA M RKKKMA YL +EA+RRG+ DN TV +++ +
Sbjct: 210 GNVRWFGFIDPEGRPIEGTGVYRINGNLAVARAIGDSSERPFVSGECEIRSMPMDHEGDQFIIIATDGLWDVMTSDEVVQYVQAVMGGAMGALREGES--------RGEFPLASDRPVDMKLSDWTQRYADDRGMIRAAMMSRKKKMARYLAQEAIRRGTMDNVTVVVMFFR 373
BLAST of mRNA_Ecto-sp13_S_contig12031.1736.1 vs. uniprot
Match: A0A4D9DDA2_9STRA (PPM-type phosphatase domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DDA2_9STRA) HSP 1 Score: 174 bits (440), Expect = 8.320e-43 Identity = 95/170 (55.88%), Postives = 120/170 (70.59%), Query Frame = 2
Query: 11 GMVTWEGFECSRGLQIEGTGVYRINGSLAVARAIGDIDYRPWLSAEVEIKTIDLKRETDQFVILASDGLWDVMSSEEAVQYVHAVMGGAMGSGKEGDKWSGDGGDKAGGSGAEADKPPHMTLVNWTQSYAEDRGMIRAATMLRKKKMAGYLMEEALRRGSTDNTTVAIVW 520
G V W G G +EG GVYRING+LAVARA GD RP++S+E EIK + ++ E D+FVILA+DGLWDVMSSEEAV +VH+VM ++G+ EG GDG AG G +P M + +WT+ +A+DRG+IRAA M RKKKMA YL EEA RRG++DN TV +VW
Sbjct: 478 GTVRWYGLLEQDGSPMEGMGVYRINGNLAVARAFGDRSERPFVSSEAEIKQLAVE-EGDEFVILATDGLWDVMSSEEAVNFVHSVMSASVGALTEG---VGDGVGGAGAEGVAGQRPADMKIFDWTKQHADDRGIIRAAMMARKKKMARYLSEEAFRRGTSDNVTVVVVW 643
BLAST of mRNA_Ecto-sp13_S_contig12031.1736.1 vs. uniprot
Match: A0A7S1UJR9_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UJR9_9STRA) HSP 1 Score: 165 bits (418), Expect = 4.640e-42 Identity = 84/172 (48.84%), Postives = 119/172 (69.19%), Query Frame = 2
Query: 11 GMVTWEGFECSRGLQIEGTGVYRINGSLAVARAIGDIDYRPWLSAEVEIKTIDLKRETDQFVILASDGLWDVMSSEEAVQYVHAVMGGAMGSGKEGDKWSGDGGDKAGGSGAEADKPPHMTLVNWTQSYAEDRGMIRAATMLRKKKMAGYLMEEALRRGSTDNTTVAIVWLQ 526
G V W G+ + G ++GTG +RING+LAV+RA GD RP++S E E+K+ + + + DQF+I+ASDGLWDVMSS EAVQYV ++ G++G+ +EG G+ +P + L W++ Y++DRG++RAA M RKKKMA YL+EEALRRG+ DN TV I+WL+
Sbjct: 192 GAVKWFGYYDTEGRPVKGTGCWRINGNLAVSRAFGDKYDRPYVSGECELKSFEYREDEDQFIIVASDGLWDVMSSSEAVQYVQTMLTGSVGALREGSVQQGN-------------RPTDVDLRTWSRQYSKDRGLVRAALMSRKKKMAKYLVEEALRRGTFDNITVVILWLK 350
BLAST of mRNA_Ecto-sp13_S_contig12031.1736.1 vs. uniprot
Match: A0A7S1FWF6_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FWF6_9STRA) HSP 1 Score: 157 bits (398), Expect = 1.690e-40 Identity = 78/171 (45.61%), Postives = 112/171 (65.50%), Query Frame = 2
Query: 11 GMVTWEGFECSRGLQIEGTGVYRINGSLAVARAIGDIDYRPWLSAEVEIKTIDLKRETDQFVILASDGLWDVMSSEEAVQYVHAVMGGAMGSGKEGDKWSGDGGDKAGGSGAEADKPPHMTLVNWTQSYAEDRGMIRAATMLRKKKMAGYLMEEALRRGSTDNTTVAIVWL 523
G V W G+ +G IEG+GVYRING+LAVARA+GD RP++ A+V++ T ++ E D+F++LA+DGLWDVM+S+E V +VH ++ ++GS G A + MT+ +W+ Y++DR M++AA R++KMA Y+ EEALRRGS DN V IVWL
Sbjct: 65 GNVVWHGYTDKKGRPIEGSGVYRINGNLAVARAVGDRSERPFVCADVDVDTFEVVPEEDEFILLATDGLWDVMTSQEVVTFVHGILRASVGSISNGKSL--------------AKRKTEMTMSDWSSKYSDDRSMVKAAMTTRRRKMARYVAEEALRRGSMDNICVVIVWL 221
BLAST of mRNA_Ecto-sp13_S_contig12031.1736.1 vs. uniprot
Match: A0A7S2RHS5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RHS5_9STRA) HSP 1 Score: 162 bits (409), Expect = 6.300e-39 Identity = 92/196 (46.94%), Postives = 122/196 (62.24%), Query Frame = 2
Query: 11 GMVTWEGFECSRGLQIEGTGVYRINGSLAVARAIGDIDYRPWLSAEVEIKTIDLKRETDQFVILASDGLWDVMSSEEAVQYVHAVMGGAMGSGKEGDKWSGDGGDKAGGSG-----------------------AEADKPPHMTLVNWTQSY-AEDRGMIRAATMLRKKKMAGYLMEEALRRGSTDNTTVAIVWLQ 526
G V W GF G +EGTGVYR+NG+LAVARA+GD +P++SAE +++ + E DQF+I+A+DGLWDVM+SEEAV YVH+VM ++G+ +EG+ D GG A ++PP + +WT + + DR MIRAA RK+KMA YL EEA+RRG+TDNTTV IVWLQ
Sbjct: 402 GEVVWHGFYNKDGTPMEGTGVYRVNGNLAVARAVGDRTEKPYISAEPDVRITRVDPEKDQFLIVATDGLWDVMTSEEAVGYVHSVMADSVGAVREGN-------DSMGGXXXXXXXXXXXXXXXASTPGPLGHIAARERPPQRRIADWTALHPSSDRAMIRAAMANRKRKMARYLCEEAMRRGTTDNTTVIIVWLQ 590
BLAST of mRNA_Ecto-sp13_S_contig12031.1736.1 vs. uniprot
Match: A0A8K1C3Y4_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C3Y4_PYTOL) HSP 1 Score: 153 bits (386), Expect = 3.620e-38 Identity = 82/172 (47.67%), Postives = 114/172 (66.28%), Query Frame = 2
Query: 11 GMVTWEGFECSRGLQIEGTGVYRINGSLAVARAIGDIDYRPWLSAEVEIKTIDLKRETDQFVILASDGLWDVMSSEEAVQYVHAVMGGAMGSGKEGDKWSGDGGDKAGGSGAEADKPPHMTLVNWTQSYAEDRGMIRAATMLRKKKMAGYLMEEALRRGSTDNTTVAIVWLQ 526
G V W G+ ++G IE G YRING+LAVARAIGD D RP++S EVEIK D D+F+++ASDGLWDV +S+EAV +VH V+ G +G G+E W SGA + +++ W+ Y DRGMI+AA + RK ++A YL++EAL RG++DN +V +VWL+
Sbjct: 140 GSVKWHGYVDAQGEPIEPYGAYRINGNLAVARAIGDRDLRPYVSGEVEIKQFDRDFTKDEFIVIASDGLWDVFTSDEAVTFVHDVLNGEVG-GRE--SWR---------SGAHGET--RVSIFEWSHQYKSDRGMIKAARLRRKTQIANYLVQEALFRGTSDNVSVVVVWLK 297
BLAST of mRNA_Ecto-sp13_S_contig12031.1736.1 vs. uniprot
Match: A0A0P1AYI9_PLAHL (Protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AYI9_PLAHL) HSP 1 Score: 150 bits (378), Expect = 1.410e-35 Identity = 78/172 (45.35%), Postives = 114/172 (66.28%), Query Frame = 2
Query: 11 GMVTWEGFECSRGLQIEGTGVYRINGSLAVARAIGDIDYRPWLSAEVEIKTIDLKRETDQFVILASDGLWDVMSSEEAVQYVHAVMGGAMGSGKEGDKWSGDGGDKAGGSGAEADKPPHMTLVNWTQSYAEDRGMIRAATMLRKKKMAGYLMEEALRRGSTDNTTVAIVWLQ 526
G V W G+ ++G IE G YR+NG+LAVARAIGD D RP+++ E EI+ D++ + D+F+++ASDGLWDV +S E +++VH VM G +G G+E WS SG +D + + W+Q Y DR MI+AA RK ++A YL++EAL RG++DN +V +VWL+
Sbjct: 303 GRVQWFGYVDAQGEPIEPYGAYRVNGNLAVARAIGDRDSRPFVNGEAEIRQYDIEYDKDEFIVIASDGLWDVFTSSEVIEFVHDVMSGELG-GRE--AWS---------SGGHSDT--RVPIFEWSQQYTRDRSMIKAARRRRKVQIANYLVQEALFRGTSDNVSVVVVWLR 460
BLAST of mRNA_Ecto-sp13_S_contig12031.1736.1 vs. uniprot
Match: M4B3H9_HYAAE (PPM-type phosphatase domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4B3H9_HYAAE) HSP 1 Score: 148 bits (374), Expect = 5.760e-35 Identity = 79/172 (45.93%), Postives = 113/172 (65.70%), Query Frame = 2
Query: 11 GMVTWEGFECSRGLQIEGTGVYRINGSLAVARAIGDIDYRPWLSAEVEIKTIDLKRETDQFVILASDGLWDVMSSEEAVQYVHAVMGGAMGSGKEGDKWSGDGGDKAGGSGAEADKPPHMTLVNWTQSYAEDRGMIRAATMLRKKKMAGYLMEEALRRGSTDNTTVAIVWLQ 526
G V W G+ ++G IE G YR+NG+LAVARAIGD D RP+++ EVEI+ D++ D+F+++ASDGLWDV +S E V++V VM G +G G+E WS SG +D + + W+Q Y DR MI+AA RK ++A YL++EAL RG++DN +V +VWL+
Sbjct: 313 GRVQWFGYVDAQGEPIEPYGAYRVNGNLAVARAIGDRDSRPYVNGEVEIRQYDIEHGKDEFIVIASDGLWDVFTSSEVVEFVQDVMSGELG-GRE--AWS---------SGGHSDT--RVPIFEWSQQYTSDRSMIKAARRRRKVQIANYLVQEALFRGTSDNVSVVVVWLR 470 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12031.1736.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig12031.1736.1 >prot_Ecto-sp13_S_contig12031.1736.1 ID=prot_Ecto-sp13_S_contig12031.1736.1|Name=mRNA_Ecto-sp13_S_contig12031.1736.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=172bp MVTWEGFECSRGLQIEGTGVYRINGSLAVARAIGDIDYRPWLSAEVEIKTback to top mRNA from alignment at Ecto-sp13_S_contig12031:650..4379- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig12031.1736.1 ID=mRNA_Ecto-sp13_S_contig12031.1736.1|Name=mRNA_Ecto-sp13_S_contig12031.1736.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3730bp|location=Sequence derived from alignment at Ecto-sp13_S_contig12031:650..4379- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig12031:650..4379- >mRNA_Ecto-sp13_S_contig12031.1736.1 ID=mRNA_Ecto-sp13_S_contig12031.1736.1|Name=mRNA_Ecto-sp13_S_contig12031.1736.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=516bp|location=Sequence derived from alignment at Ecto-sp13_S_contig12031:650..4379- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |