mRNA_Ecto-sp13_S_contig12019.1726.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig12019.1726.1
Unique NamemRNA_Ecto-sp13_S_contig12019.1726.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig12019.1726.1 vs. uniprot
Match: D7FUH6_ECTSI (LRR-GTPase of the ROCO family, incomplete sequence n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUH6_ECTSI)

HSP 1 Score: 1229 bits (3179), Expect = 0.000e+0
Identity = 619/675 (91.70%), Postives = 636/675 (94.22%), Query Frame = 1
Query:    4 EWQTAQRQAEKAKQTPQDRCGPPASGSTTGYPMDHAAAPPPTLHLCGFISGSGRRLEDLSVLGRKIWEIANEASLFPDIHQTVPKSWRRVWAVMDALREGADPQKAVRLDGPLTPVEGREKREFVTREEAFEAWWGADGESVAELKAKGPDSQQLNQDSKRLFQAALKLRQMGGSVLAACGLVHLNVAWINELLRELLDHRLADPKQASFANWWVEQLRTYCRERGVFFNRLIGIHRRFVITGVLTKEYLRFLWREVKAVQDDEVFDRLVDTMALHDAMFPCEKNGIHEEGEFMVPARLPASVPCASLAELEKAVSQGTRMQFVIAIYAGYVPPGIIPQFLGELKRRDGGISGEFVFHVSWHRGVAFMTAGQQILVRLGETCAPPQRVVEVNIAGDAEKDVYDTGFEVKKLVARLLEKRYPGLDFDPEAQPTFLKGRKAWQDTRAALRGDLVEELERNLEAVLRRILEPSSNPGDGLAESNTLIPKLIDGALAKRLSSLCSDMQLDVNRKLNETTMEIVAGVEQVVQANLSNAAVAGLRPTERDILVGVAREVALLRWPIPRFVCVLPARDTRLSESDRSFEKWSIALKEWCTFKSPAKDVKYPNQKTSILGLKKPQLTRLVTRELRLFFLCGQDKSLAECGPDGQGYEVKEFLDWVRKVAPAAKIGLALASIAL 2028
            EWQTAQRQAEKAKQTPQDRCGP ASGSTTGYP DHAAAPPPTL LCGFI GSGR LEDLSVLGRKIWEIANEASLFPDIHQTVPKSWRRVWAVMDALREGADPQKAVRLDGPL PVEGREKREFVTRE AFEAWWG DGESVAELKAKGPDSQQL QDS RLFQAALKLRQMGGSVLAACGLVHLNVAWINELLRELLDHRLADPKQA    WWVEQL+TYC +RGV FNRLIGIHRRFVITG+LTKEYLRFLWREVKAVQD+EVFDRLVDTMALHDAMFPCEKNG+ EEGEFMVPARLPASV CASLAELE AVSQGTRMQFVI I AGYVPPGIIPQFLGELKRRDGGISG+FVFHVSWHRGVAFMTAGQ+ILVRLGETCAP QRVVEVNIAG AEKDVY TGF +K LV RLLE+RYPGLDFDPE +PTF KGR+AWQDTRAALRGDLVEELE NLEAVLR+ILEPSS+PGDGLAESNTLIPKLIDGALAKRLSSLCSDMQLDVNRKLNETTM++VAGVEQVVQANLSNAAVAGLRPTERDILVGVAREVA+LRWPIPRFVCVLPARDTRLSESDRSFEKWS ALKEWC  KSPAKD K PN+KTSILGL KPQL  LVTRELRLFFLCGQDKSLAECGPDGQGYEVKEFLDWVRK APAAKIGLALASIAL
Sbjct:  334 EWQTAQRQAEKAKQTPQDRCGPLASGSTTGYPADHAAAPPPTLQLCGFILGSGRSLEDLSVLGRKIWEIANEASLFPDIHQTVPKSWRRVWAVMDALREGADPQKAVRLDGPLAPVEGREKREFVTREAAFEAWWGVDGESVAELKAKGPDSQQLKQDSSRLFQAALKLRQMGGSVLAACGLVHLNVAWINELLRELLDHRLADPKQAK---WWVEQLKTYCHDRGVKFNRLIGIHRRFVITGMLTKEYLRFLWREVKAVQDEEVFDRLVDTMALHDAMFPCEKNGVLEEGEFMVPARLPASVACASLAELENAVSQGTRMQFVINIEAGYVPPGIIPQFLGELKRRDGGISGDFVFHVSWHRGVAFMTAGQEILVRLGETCAPSQRVVEVNIAGGAEKDVYATGFGIKNLVVRLLEQRYPGLDFDPETKPTFKKGREAWQDTRAALRGDLVEELEPNLEAVLRKILEPSSSPGDGLAESNTLIPKLIDGALAKRLSSLCSDMQLDVNRKLNETTMKVVAGVEQVVQANLSNAAVAGLRPTERDILVGVAREVAILRWPIPRFVCVLPARDTRLSESDRSFEKWSTALKEWCASKSPAKDAKNPNRKTSILGLNKPQLRGLVTRELRLFFLCGQDKSLAECGPDGQGYEVKEFLDWVRKAAPAAKIGLALASIAL 1005          
BLAST of mRNA_Ecto-sp13_S_contig12019.1726.1 vs. uniprot
Match: A0A6H5L6I0_9PHAE (Roc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6I0_9PHAE)

HSP 1 Score: 1034 bits (2674), Expect = 0.000e+0
Identity = 522/580 (90.00%), Postives = 539/580 (92.93%), Query Frame = 1
Query:    4 EWQTAQRQAEKAKQTPQDRCGPPASGSTTGYPMDHAAAPPPTLHLCGFISGSGRRLEDLSVLGRKIWEIANEASLFPDIHQTVPKSWRRVWAVMDALREGADPQKAVRLDGPLTPVEGREKREFVTREEAFEAWWGADGESVAELKAKGPDSQQLNQDSKRLFQAALKLRQMGGSVLAACGLVHLNVAWINELLRELLDHRLADPKQASF--------ANWWVEQLRTYCRERGVFFNRLIGIHR---------------RFVITGVLTKEYLRFLWREVKAVQDDEVFDRLVDTMALHDAMFPCEKNGIHEEGEFMVPARLPASVPCASLAELEKAVSQGTRMQFVIAIYAGYVPPGIIPQFLGELKRRDGGISGEFVFHVSWHRGVAFMTAGQQILVRLGETCAPPQRVVEVNIAGDAEKDVYDTGFEVKKLVARLLEKRYPGLDFDPEAQPTFLKGRKAWQDTRAALRGDLVEELERNLEAVLRRILEPSSNPGDGLAESNTLIPKLIDGALAKRLSSLCSDMQLDVNRKLNETTMEIVAGVEQVVQANLSNAAVAGLRPTERDILVGVAREVALLR 1674
            EWQTAQRQAE  KQTPQDRCGPPASGSTTGYP DHAAAPPPTL LCGFISGSGR LEDLSVLGRKIWEIA+E SLFPDIHQ +PKSWRRVWAVMDALREGADPQKAVRLDGPL PVEGREKREFVTREEAFEAWWGADGESVAELKAKGPDSQ LNQDS+RLFQAALKLRQMGGSVLAACGLVHLNVAWINELLRELLDHRLADPKQASF        ANWWVEQLRTYCRERGV FNRLIGIHR               RFVITGV+TKEYLRFLWREVKAVQDDEVFDRLVDTMALHDAMFPC+KNGIH+EGEFMVPARLPASVPCASLAELEKA+SQGTRMQFVIAIYAGYVPPGIIPQFLGELKRRD GISGEFVFHVSWHRGVAFMTAGQQILVRLGETC P QRVVEVNIAGDAEKDVYDTGF +KKL+ RLLEKRYPGLDFDPEA PT +KG++AWQ+TRAALRGDLVEELERNLEAVLRRILEPSSNPGDGLAESNTLIPKLIDGALAKRL+SLCSDMQLDVNRKLNETTMEIVAGVEQVVQANLSNAAV GLRP+ER+ILVGVARE+ALLR
Sbjct:  229 EWQTAQRQAENTKQTPQDRCGPPASGSTTGYPADHAAAPPPTLQLCGFISGSGRSLEDLSVLGRKIWEIAHEESLFPDIHQKIPKSWRRVWAVMDALREGADPQKAVRLDGPLAPVEGREKREFVTREEAFEAWWGADGESVAELKAKGPDSQHLNQDSQRLFQAALKLRQMGGSVLAACGLVHLNVAWINELLRELLDHRLADPKQASFVSLSHFAAANWWVEQLRTYCRERGVLFNRLIGIHRVQTVPCKNNQSCALRRFVITGVITKEYLRFLWREVKAVQDDEVFDRLVDTMALHDAMFPCDKNGIHQEGEFMVPARLPASVPCASLAELEKAISQGTRMQFVIAIYAGYVPPGIIPQFLGELKRRDCGISGEFVFHVSWHRGVAFMTAGQQILVRLGETCVPSQRVVEVNIAGDAEKDVYDTGFAIKKLIVRLLEKRYPGLDFDPEANPTLMKGKEAWQETRAALRGDLVEELERNLEAVLRRILEPSSNPGDGLAESNTLIPKLIDGALAKRLTSLCSDMQLDVNRKLNETTMEIVAGVEQVVQANLSNAAVVGLRPSERNILVGVARELALLR 808          
BLAST of mRNA_Ecto-sp13_S_contig12019.1726.1 vs. uniprot
Match: D8LLG1_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLG1_ECTSI)

HSP 1 Score: 625 bits (1611), Expect = 1.300e-208
Identity = 340/651 (52.23%), Postives = 430/651 (66.05%), Query Frame = 1
Query:   97 PMDHAAAPPPTLHLCGFISGSGRRLEDLSVLGRKIWEIANEASLFPDIHQTVPKSWRRVWAVMDALREGADPQKAVRLDGPLTPVEGREKREFVTREEAFEAWWGADGESVAELKAKGPDSQQLNQDSKRLFQAALKLRQMGGSVLAACGLVHLNVAWINELLRELLDHRLADPKQASFANWWVEQLRTYCRERGVFFNRLIGIHRRFVITGVLTKEYLRFLWREVKAVQDDEVFDRLVDTMALHDAMFPCEKNGIHEEG--EFMVPARLPASVPCASLAELEKAVSQGTRMQFVIAIYAGYVPPGIIPQFLGELKRRDGGISGEFVFHVSWHRGVAFMTAGQQILVRLGETCAPPQRVVEVNIAGDAEKDVYDTGFEVKKLVARLLEKRYPGLDFDPEAQPTFLKGRKAWQDTRAALRGDLVEELERNLEAVLRRILEPSSNPGDGLAESNTLIPKLIDGALAKRLSSLCSDMQLDVNRKLNETTMEIVAGVEQVVQANLSNAAV--AGLRPTERDILVGVAREVALLRWPIPRFVCVLPARDTR---LSESDRSFEKWSIALKEWCTFKSPAKDVKYPNQKTSILGLKKPQLTRLVTRELRLFFLCGQDKSLAECGPDGQGYEVKEFLDWVRKVAPAAKIGLALASIAL 2028
            P D +   PP+LHLCGFIS SGR L+ LS +G KIWE+ANE ++FP + + VP  WRRVWAVMDAL  GADP  AVRL+GP+  +EGR+K EFVT E+AFE W  AD ES  +L+A G   +QL   S R F+AAL LR MGGSVLA CGL+HLN +WIN LLRE+LDHRL DP +     WW +QL+ Y R RG+  N L+  HR F  TG+LT+E+LRFLWR+V    D++VF RLV+TM  HDAMFPC  +G+ E    EFMVPARLP  V   S A+LE A+S+GTRMQFVI IYA YVPP II +FLG   R + G+    +F   W RGVAF+  G++ LVR+GE  A P  ++E+NIAG    DV+  GFE+KK V  LL + YPGL FD  A P F  G +AWQD+  AL+ DL ++L++ LE+VL   LE     G  L+         ++ A+A+RL+SLC D Q D N +L+    E+VA VEQVV+A+LS  AV   GL  TER IL  +AR VA L WPIP  +CVLPAR++    L E DRSFE+WS  L++ C+             + + +G        + T++LRLFFLC  D SLAECGPDGQGY+V E L W +K  P A++GLALASIA+
Sbjct:  369 PADRSKPAPPSLHLCGFISVSGRSLDGLSTVGEKIWEVANEPAVFPSVRKIVPGIWRRVWAVMDALHVGADPDSAVRLEGPVVTIEGRDKHEFVTEEQAFEVWSHADRESATQLEAAGHFGEQLRLVSSRHFKAALNLRHMGGSVLAVCGLIHLNPSWINVLLREVLDHRLTDPNEDE---WWWKQLKAYERNRGIPINELLETHRHFTTTGILTEEFLRFLWRDVLKGVDEKVFARLVETMTAHDAMFPCN-DGVTEGNVREFMVPARLPDGVTGDSFAKLEDAMSRGTRMQFVIEIYAKYVPPAIIAKFLGGFGRDESGVFRNLMFRTCWARGVAFVADGRECLVRVGEVSARPLPMIEINIAGPDVNDVFKVGFEIKKNVKDLLREAYPGLAFDSSAHPRFENGTEAWQDSLEALQKDLFDKLDQRLESVLSEFLEAFK--GQSLS---------VNEAVARRLNSLCLDCQRDANFQLDAKVHEVVARVEQVVRASLSTTAVPKGGLNETERGILNSLARNVAFLLWPIPSLMCVLPARESGAKPLDERDRSFEEWSTVLQKRCS-------------EGNKMG------RGVATQKLRLFFLCPLDMSLAECGPDGQGYQVTELLSWAKKAKPLAELGLALASIAV 985          
BLAST of mRNA_Ecto-sp13_S_contig12019.1726.1 vs. uniprot
Match: A0A6H5L2L4_9PHAE (Roc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2L4_9PHAE)

HSP 1 Score: 132 bits (333), Expect = 2.220e-28
Identity = 141/531 (26.55%), Postives = 223/531 (42.00%), Query Frame = 1
Query:  517 MGGSVLAACGLVHLNVAWINELLRELLDHRLADPKQASFANWWVEQLRTYCRERGVFFNRLIGIHRRFVITGVLTKEYLRFLW----------REVKAVQDDEVFDRLVDTMALHDAMFPCE-KNGIHE--EGEFMVPARLP----ASVPCASLAELEKAVSQGTRMQFVIAIYAGYVPPGIIPQFLG-------ELKRRDGGISGEFVFHVSWHRGVAFMTAGQQILVRLGETCAPPQRVVEVNIAGDAEKDVYDTGFEVKKLVARLLEKRYPGLDFDPEAQPTFLKGRKAWQDTRAALRGDLVEELERNLEAVLRRILEPSSNPGDGLAESNTLIPKLIDGALAKRLSSLCSDMQLDVNRKLNETTMEIVAGVEQVVQANLSNAAVAGLRPTERDILVGVAREVALLRWPIPRFVCVLPARDTR---LSESDRSFEKWSIALKEWCTFKSPAKDVKYPNQKTSILGLKKPQLTRLVTRELRLFFLCGQDKSLAECGPDGQGYEVKEFLDWVRKVAPAAKIGLALASIAL 2028
            +G +  AA  ++H+N +   +L+R ++D RL  P+Q +     VE+    C         L   H+RF+ TG ++K+YL+FLW          +E   ++  E  D  V   +L D  F    ++G H      ++V + LP      V    + EL+   +  ++   ++ ++A  VPPG++P+ L        E++  DG          SW                    C     V + + A  A KD+ D   +V +L++   + R+PGL                    R+    + V   + + +A+L RI++   +                               Q++V   ++ +                                  + ++VA LRWPIPR VCVLPA ++    L E DRSFE+WS  L+ WC                  LG K+       TR+LR+FFLC  D+S+AECGP GQGYEV E ++W +K  P+AK+GLALASIAL
Sbjct:  440 IGAAASAADLIIHVNPSRFADLVRRVVDVRLVAPRQQAK----VEEAMEACPLVRSSLLTLTDQHKRFIKTGEVSKDYLKFLWLRDMDLREASQEAPPLEMSEA-DVEVMVSSLLDVRFMYRVRDGQHAFVPDRYVVASCLPNKAGPDVDPGKILELKTGNAIYSQKLKLVRVHA--VPPGLVPRLLSCHLVLLYEVRATDG---------TSWIE------------------CHARGNVFDES-ARTALKDIGD---QVDELISDH-KNRFPGLGL-----------------VRSGESEETVVYSDSDHKALLERIVDVQRD-------------------------------QMNVKLMMDRS----------------------------------MRQDVAFLRWPIPRLVCVLPAPESGAKPLEEGDRSFEQWSATLRNWC------------------LGGKRTG-KGFATRKLRMFFLCPYDRSIAECGPGGQGYEVTELVEWAKKAMPSAKVGLALASIAL 830          
BLAST of mRNA_Ecto-sp13_S_contig12019.1726.1 vs. uniprot
Match: A0A6H5K9A9_9PHAE (Roc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9A9_9PHAE)

HSP 1 Score: 123 bits (309), Expect = 1.980e-25
Identity = 66/129 (51.16%), Postives = 80/129 (62.02%), Query Frame = 1
Query: 1648 VAREVALLRWPIPRFVCVLPARDTR---LSESDRSFEKWSIALKEWCTFKSPAKDVKYPNQKTSILGLKKPQLTRLVTRELRLFFLCGQDKSLAECGPDGQGYEVKEFLDWVRKVAPAAKIGLALASIA 2025
            + +++A LRWPIPR VCVLPA ++    L E DRSF+KWS  L+ WC                  LG K+     + TR+LRLFFLC  D+SLAECGP GQGYEV E L W +K  P AK+GLALAS A
Sbjct:  731 IKQDLAFLRWPIPRLVCVLPAPESGAKPLEEKDRSFDKWSATLRNWC------------------LGGKRKG-KGVATRKLRLFFLCPYDRSLAECGPGGQGYEVTELLTWAKKAIPLAKVGLALASTA 840          
BLAST of mRNA_Ecto-sp13_S_contig12019.1726.1 vs. uniprot
Match: D7FU35_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU35_ECTSI)

HSP 1 Score: 123 bits (308), Expect = 3.170e-25
Identity = 66/128 (51.56%), Postives = 80/128 (62.50%), Query Frame = 1
Query: 1654 REVALLRWPIPRFVCVLPARDTR---LSESDRSFEKWSIALKEWCTFKSPAKDVKYPNQKTSILGLKKPQLTRLVTRELRLFFLCGQDKSLAECGPDGQGYEVKEFLDWVRKVAPAAKIGLALASIAL 2028
            ++VA LRWPIPR VCVLPA ++R   L E DRSFE+WS  L+ WC            + K +  G          TR+LR+FFLC  D+SLAECGP GQGYEV E L W +K  P A++G ALASIAL
Sbjct: 1009 QDVAFLRWPIPRLVCVLPAPESRAKPLEEKDRSFEQWSATLRNWCV-----------DGKRTGKGF--------ATRKLRVFFLCPYDRSLAECGPGGQGYEVTELLGWAKKAMPFAEVGRALASIAL 1117          
BLAST of mRNA_Ecto-sp13_S_contig12019.1726.1 vs. uniprot
Match: A0A6H5JXK6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXK6_9PHAE)

HSP 1 Score: 88.2 bits (217), Expect = 6.640e-15
Identity = 70/188 (37.23%), Postives = 91/188 (48.40%), Query Frame = 1
Query: 1465 IDGALAKRLSSLCSDMQLDVNRKLNETTMEIVAGVEQVVQANLSNAAVAGLRPTERDILVGVAREVALLRWPIPRFVCVLPARDTRLSESDRSFEKWSIALKEWCTFKSPAKDVKYPNQKTSILGLKKPQLTRLVTRELRLFFLCGQDKSLAECGPDGQGYEVKEFLDWVRKVAPAAKIGLALASIAL 2028
            +D ALA RLS   + MQLD          E+         A  S A + GL  TER++L  +A+ VA +RWPIPR V +L A D+          + ++  ++ C            NQ             RLVTR+LRLFF      SLA CGP G    V E L+W +K   AAK+GLA+ASIAL
Sbjct:  184 LDEALANRLSRPRAGMQLD----------EL---------APTSGAGIGGLNQTERNVLTSIAQNVAFMRWPIPRLVWLLLAPDSG---------EPALTAEQRC------------NQAKG---------RRLVTRKLRLFFRYSHHYSLAVCGPGGA--RVTELLNWAKKAKSAAKVGLAVASIAL 320          
BLAST of mRNA_Ecto-sp13_S_contig12019.1726.1 vs. uniprot
Match: A0A6H5LNE2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LNE2_9PHAE)

HSP 1 Score: 89.0 bits (219), Expect = 1.100e-14
Identity = 56/154 (36.36%), Postives = 81/154 (52.60%), Query Frame = 1
Query:   79 GSTTGYPMDHAAAPPPTLHLCGFISGSGRRLEDLSVLGRKIWEIANEASL----FPDIHQTVPKSWRRVWAVMDALREGADPQKAVRLDGPLTPVEGREKR---EFVTREEAFEAWW----GADGESVAELKAKGPDSQQLNQDSKRLFQAALK 507
            GS      +   +PPP+L LC FIS  GR  + L+ L +KI+++  E       FP + Q VP SWRRVWAVM AL  G   ++AVRL+GP+ P+EG E     +F  + EA +         D  S  E+  +  D  QL+ + + +  A +K
Sbjct:  112 GSNANSSSERPPSPPPSLWLCRFISICGRSSDGLASLKKKIYDVIMEPGTDNFAFPHLRQHVPNSWRRVWAVMSALHVGVGLKQAVRLEGPIVPLEGGENSSLWKFKKQNEASQLLQVYIEAHDSLSDTEIMEQQLDELQLSDEQRNVIDALIK 265          
BLAST of mRNA_Ecto-sp13_S_contig12019.1726.1 vs. uniprot
Match: A0A6H5JXU4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXU4_9PHAE)

HSP 1 Score: 83.6 bits (205), Expect = 2.600e-13
Identity = 55/136 (40.44%), Postives = 73/136 (53.68%), Query Frame = 1
Query: 1648 VAREVALLRWPIPRFVCVLPARDTR---LSESDRSFEKWSIALKEWCTFKSPAKDVKYPNQKTSILGLKKPQLTRLVTRELRLFFLCGQDKSLAECGPDGQGY------EVKEFLDWVRKVAPAAKIGLALASIAL 2028
            + ++ A L+WPIPR +C+LPA  +    L E D SFE+WS  L++WC                  LG K+     + TR+LRLFFL     S +E GP G+        +V E L W +K  P AK+GLALASIAL
Sbjct:  286 IRQDAAFLQWPIPRLLCLLPAPKSGAKPLEEKDGSFEEWSATLRKWC------------------LGGKRKG-KGVATRKLRLFFLRTTGASPSE-GPQGKASRADVRSQVTELLKWAKKAKPFAKVGLALASIAL 401          
BLAST of mRNA_Ecto-sp13_S_contig12019.1726.1 vs. uniprot
Match: A0A6H5K561_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K561_9PHAE)

HSP 1 Score: 63.9 bits (154), Expect = 2.420e-7
Identity = 42/105 (40.00%), Postives = 53/105 (50.48%), Query Frame = 1
Query: 1648 VAREVALLRWPIPRFVCVLPARDTR---LSESDRSFEKWSIALKEWCTFKSPAKDVKYPNQKTSILGLKKPQLTRLVTRELRLFFLCGQDKSLAECGPDGQGYEV 1953
            + R+   +RWPI    CVLP  ++    L E +RSFE WS  L+  C      +D K              Q     TR+L +FFLC  D+SLAECGP GQG EV
Sbjct:  163 ILRDQTNVRWPI--LACVLPTPESDVKPLEEINRSFEGWSTVLRSCC------RDGK-------------KQRKGFATRKLWMFFLCPVDRSLAECGPGGQGCEV 246          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12019.1726.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
D7FUH6_ECTSI0.000e+091.70LRR-GTPase of the ROCO family, incomplete sequence... [more]
A0A6H5L6I0_9PHAE0.000e+090.00Roc domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LLG1_ECTSI1.300e-20852.23LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
A0A6H5L2L4_9PHAE2.220e-2826.55Roc domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5K9A9_9PHAE1.980e-2551.16Roc domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FU35_ECTSI3.170e-2551.56LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
A0A6H5JXK6_9PHAE6.640e-1537.23Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5LNE2_9PHAE1.100e-1436.36Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JXU4_9PHAE2.600e-1340.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K561_9PHAE2.420e-740.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12019contigEcto-sp13_S_contig12019:3..4810 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score1236.1
Seed ortholog evalue0.0
Seed eggNOG ortholog2880.D7FUH6
Model size2028
Hectar predicted targeting categoryother localisation
Exons7
EggNOG free text desc.regulation of response to stimulus
EggNOG OGsCOG4886@1,KOG0619@2759
Ec32 ortholog descriptionLRR-GTPase of the ROCO family, incomplete sequence
Ec32 orthologEc-03_000130.1
Cds size2028
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12019.1726.1prot_Ecto-sp13_S_contig12019.1726.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig12019 3..4810 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462638.2868042-CDS-Ecto-sp13_S_contig12019:2..801681462638.2868042-CDS-Ecto-sp13_S_contig12019:2..80Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12019 3..80 -
1681462638.297004-CDS-Ecto-sp13_S_contig12019:726..10031681462638.297004-CDS-Ecto-sp13_S_contig12019:726..1003Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12019 727..1003 -
1681462638.3057783-CDS-Ecto-sp13_S_contig12019:1235..15431681462638.3057783-CDS-Ecto-sp13_S_contig12019:1235..1543Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12019 1236..1543 -
1681462638.3151124-CDS-Ecto-sp13_S_contig12019:1842..24941681462638.3151124-CDS-Ecto-sp13_S_contig12019:1842..2494Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12019 1843..2494 -
1681462638.3249104-CDS-Ecto-sp13_S_contig12019:2736..28161681462638.3249104-CDS-Ecto-sp13_S_contig12019:2736..2816Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12019 2737..2816 -
1681462638.3343942-CDS-Ecto-sp13_S_contig12019:3634..37721681462638.3343942-CDS-Ecto-sp13_S_contig12019:3634..3772Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12019 3635..3772 -
1681462638.346346-CDS-Ecto-sp13_S_contig12019:4315..48101681462638.346346-CDS-Ecto-sp13_S_contig12019:4315..4810Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12019 4316..4810 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig12019.1726.1

>prot_Ecto-sp13_S_contig12019.1726.1 ID=prot_Ecto-sp13_S_contig12019.1726.1|Name=mRNA_Ecto-sp13_S_contig12019.1726.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=676bp
QEWQTAQRQAEKAKQTPQDRCGPPASGSTTGYPMDHAAAPPPTLHLCGFI
SGSGRRLEDLSVLGRKIWEIANEASLFPDIHQTVPKSWRRVWAVMDALRE
GADPQKAVRLDGPLTPVEGREKREFVTREEAFEAWWGADGESVAELKAKG
PDSQQLNQDSKRLFQAALKLRQMGGSVLAACGLVHLNVAWINELLRELLD
HRLADPKQASFANWWVEQLRTYCRERGVFFNRLIGIHRRFVITGVLTKEY
LRFLWREVKAVQDDEVFDRLVDTMALHDAMFPCEKNGIHEEGEFMVPARL
PASVPCASLAELEKAVSQGTRMQFVIAIYAGYVPPGIIPQFLGELKRRDG
GISGEFVFHVSWHRGVAFMTAGQQILVRLGETCAPPQRVVEVNIAGDAEK
DVYDTGFEVKKLVARLLEKRYPGLDFDPEAQPTFLKGRKAWQDTRAALRG
DLVEELERNLEAVLRRILEPSSNPGDGLAESNTLIPKLIDGALAKRLSSL
CSDMQLDVNRKLNETTMEIVAGVEQVVQANLSNAAVAGLRPTERDILVGV
AREVALLRWPIPRFVCVLPARDTRLSESDRSFEKWSIALKEWCTFKSPAK
DVKYPNQKTSILGLKKPQLTRLVTRELRLFFLCGQDKSLAECGPDGQGYE
VKEFLDWVRKVAPAAKIGLALASIAL
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mRNA from alignment at Ecto-sp13_S_contig12019:3..4810-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig12019.1726.1 ID=mRNA_Ecto-sp13_S_contig12019.1726.1|Name=mRNA_Ecto-sp13_S_contig12019.1726.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4808bp|location=Sequence derived from alignment at Ecto-sp13_S_contig12019:3..4810- (Ectocarpus species13 EcNAP12_S_4_19m)
CAGGAGTGGCAGACTGCTCAGCGACAGGCCGAGAAAGCCAAGCAGACGCC ACAAGATCGATGTGGTCCCCCGGCAAGTGGTTCAACTACAGGATACCCGA TGGATCACGCAGCAGCACCTCCCCCCACGCTCCATCTGTGCGGCTTCATC TCGGGCTCCGGCCGCAGGTTGGAGGACCTTTCGGTTCTTGGGAGAAAGAT CTGGGAGATCGCCAACGAGGCGTCCCTGTTCCCGGACATCCATCAGACGG TCCCCAAGTCCTGGAGGAGGGTGTGGGCCGTCATGGATGCGTTGCGCGAG GGAGCAGACCCCCAGAAAGCGGTGCGACTGGACGGTCCTCTTACCCCGGT CGAAGGGCGCGAGAAGCGCGAGTTTGTGACCCGGGAAGAAGCGTTCGAAG CGTGGTGGGGTGCGGATGGCGAATCAGTGGCGGAGCTGAAGGCCAAAGGC CCAGACAGCCAACAACTCAACCAGGATTCCAAACGTCTGTTCCAGGTACG GTGGGGCGTGCTTGAAGTATCCAAGTCCAGTTCTCCCGCACACCGTGGTG TCCATGTTTGGGTCTTCGGCCGTCAATTGTGCCAACGCCAAACCTGAGGC ACACATTCCCGTCTGGGAGACGCAACTCCCGCGCCGCTTGTATGTGTGAT CAAAAAGGAGTTCACGACTTGCCCAGGATTATCCTCGTGTGATATTCCTG CGATCGAAAAGGACGGCAAGTTTTCCCGAGGGCTATTCCTCCTGCGGCAC GACCATACGTTGTTGGATAGGCGTTACTCGCCCATGGAGCGGTGCTCATC TGAGGCACGCGACTTGGTTATGTAGCCAGGAAGGGGTGAGCGATGGAGAT CGAACGAACTACAGAGCGGCAGGGCAACGTTCCGCCGAAACGTGTGAGAT GTTCAACCTGATTTTCGATGTCTTTTCCGAATAACGCGTACGAACGGAAC GGACCAAACGCTGCACCGAACAATGTGCTGCTGATTTTCCGTGCATGCAT GTCCTTGCCGGGCTGCATCAATGTGTGCAATTGAACAGGCGGCGCTAAAG CTGCGGCAGATGGGTGGATCAGTCCTGGCGGCGTGTGGCCTGGTCCACCT AAACGTCGCCTGGATCAATGAGTTGCTACGGGAGCTCCTGGACCATCGCT TGGCCGATCCAAAGCAGGCGAGCTTTGTTTCTCTTTCCCACTGTGCTGCT GTAGTCGAATGTAGTGTGCGGACACGTGGCTCAGTTTTGGGCACGCAAAC GTACCGCAGGGATTGTAGGTGCACCTCTCCGGGCTTGCGTGCCCTTTCTT GCGAAGTGTGCGTTTCTTAGATCTTCTGATGGCTCTAGCATTTTTGTGAC TACGGACCGAGTCTTTGCTAGATTTTGGGATTAGCAAATAGCACAAGTTT AATGTAAAGAAGGAACGACAAGTACGACGTTGAAGCCGGTGTGTCATCGG GGGCATTGGCCGCCACAGAAGTCCAGCTCACGAGCAGCCAGGGGAGATGA ACCCCTCCCTGGGTCAGACTGCCACTTCGCCGCCAGAGTGGCACGTAGAG ACGTCATCGCCCGACACATCGCCCGTGAAACTGAGGCCAAGGAGTGAAGG ATCGGCATGCCTATACGTTTCAAAATTGCAAAGCCAAGTGGTAGAGGTTG AATTCCTCGTCCTAGACCCCGTCGACGAGCACAAACATGTTAGAAGCTCA TCCAAACATGTCAGAGCTCGTCAAAACACGTTGAAGCTCGTCCGGCCCAA AATGCCGAGTGGAGATACCCGTACTCACCCCACGGAAATATGTCGATAGG CTCCTTCAAGTAGCGGACGGACGCATTGATTTCGACATTAGCCATCCCGC GCTGCCGATCCCGCCCCCCGGACTCACATCAAGCGACCACCAGCAGTAGC CAAGAAACAGCGAACTATGGGGAAGTTACCCGATTTTTGTCCCATGGCTC TCTGCGGGTGTACGTATCCCCCACGCTATCGCTGGAATGCTCAGGCCAAC TGGTGGGTTGAGCAGCTGAGGACGTACTGCCGCGAACGTGGCGTCTTCTT CAACAGGCTCATCGGCATCCACAGGTTGGAAATTGGTGGTCGGTGTGCCT GTCGAATTCGATAGAGCTACTGTAGACCCTCCCTGCCTGGCGTAGCTTTT GATACAGGCAGATCGACAACGACAAGTATCGTAGTCACAGCGTACAAACG GTGCCATGCAAGAACATTTAACCGCGTGCTTTGAGGTATATCGGACAAAG TTGTCTGGAGTTCAGGACTTTTCCCGGCTAACACTTCCCGGTACGGTGCC CTGTCTTTGCGCGTAGGCGCTTCGTCATTACGGGGGTGCTCACGAAGGAG TACCTTCGTTTTCTATGGCGGGAGGTAAAGGCGGTCCAGGACGATGAAGT TTTCGACCGCCTAGTCGATACGATGGCTCTACACGACGCTATGTTTCCGT GTGAAAAGAATGGGATCCATGAGGAAGGAGAGTTCATGGTACCCGCTCGG CTCCCGGCCAGCGTTCCTTGTGCCTCCCTCGCGGAGCTGGAGAAAGCGGT ATCTCAAGGTACCCGGATGCAGTTCGTCATCGCGATCTACGCCGGCTATG TCCCGCCGGGAATCATCCCGCAGTTTCTCGGCGAGTTGAAACGTAGGGAC GGCGGGATTTCCGGAGAGTTCGTGTTTCACGTTTCCTGGCACCGGGGGGT GGCGTTCATGACGGCAGGGCAGCAGATCCTTGTGCGCCTCGGGGAGACTT GTGCTCCTCCCCAACGTGTAGTGGAGGTGAACATTGCCGGGGATGCCGAA AAGGACGTGTACGACACTGGTTTCGAAGTAAAAAAACTTGTTGCACGTCT TCTGGAAAAGCGCTACCCAGGGCTGGACTTCGACCCTGAGGCTCAGCCCA CCTTTCTGAAGGGAAGAAAAGCCTGGCAGGATACCCGGGCCGCGCTTCGG GGAGACTTGGTCGAAGAGGTACGGCGAAGAAGACTTTTGTTCTGATACAT TCTCCGAGCGTTCGTTGGTATCACAACGTGTATCACCGATGTAAGGTGTT CTCCGCGGGTGCTTTCGAATCAAGCCCATCCCATTTAGCGCGTGTATTGG AGGCACCCAAAAATTGGTCTCGTTGTCGCGCGTCAGAGAGTCTATGTGCT CTTAGCAGACGATGTCTTCTGTAGGAAACCTTGTTTGGTGAATGGAGCGA CAAAGAGCGACATTTACCCCTTCCGATGCTCTCCGTTCCCCTTGATCGCC TTCTCGGCCCGGTGCAGCTGGAACGAAACCTGGAGGCGGTGCTGAGAAGG ATCCTAGAACCCTCCAGCAATCCAGGCGACGGGCTGGCAGAATCCAACAC GCTCATCCCGAAACTCATCGATGGAGCTCTGGCGAAGAGGCTCAGTAGCT TGTGCTCAGACATGCAGCTTGACGTCAACCGCAAGCTGAACGAGACGACT ATGGAGATTGTGGCCGGCGTGGAACAAGTCGTCCAGGCGAACCTGTCGAA CGCGGCGGTTGCTGGGCTGAGACCGACAGAGAGGGACATCCTGGTTGGCG TTGCGCGGGAAGTGGCCCTTCTGCGGTGAGCACCCCTAACAGCAGGGTTT GGTTACGGGAATGTTTCTCACCCACGAGCACTCTCGGGTGAGCTGTTACC CAACAGGAAGTATTTTTAGGCTATGTAGACAAGCTCGCCTCAATGGTTCC CGAATCCACACCATTCGGGAACACTGGTCACACGTTCCCGATGGGGTGGA GTGAGTCCTGGGCAACGCTTTTTCTCATTGGTGTACTGTCGGAATTGAAA TACTCAGGTGGCCGATCCCTCGCTTTGTGTGCGTGCTCCCCGCCCGGGAC ACGCGCCTCTCGGAGAGCGATAGATCTTTCGAGAAGTGGTCGATTGCACT AAAGGAGTGGTGCACGTTCAAGAGCCCCGCGAAGGACGTGAAGTACCCCA ACCAGAAGACTAGCATCCTCGGCTTGAAGAAGCCCCAGCTTACGAGGCTC GTGACGCGAGAACTCCGCCTATTCTTCCTCTGTGGCCAAGACAAGAGCCT GGCCGAGTGTGGGCCCGATGGGCAAGGGTACGAGGTGAGCAGCCCAGAGA ATGGTAGCGTTGAGTATTTGAATCGTCCGATATCTGGCAACAAACCCGTT GGTAGCTGCGTTCTTTTACTGCGGCACGCGCGTGTGTTTTTATCCTGGAG GCGTGCGCTTCGCTGTCCATGTCGGCAGCGTGGCGATGACGAGAGGAAAG ACAACCGGCCGCTAAGTTCATTAGATATGACGTGAAAGAGCGAGGGACTC AAGAGGGAGCGTGTGCCTTTTGTCGAAAATACTCCCACCACTCACCCGAG TCCATCGTCACGCCTGAAGTCGCTGTTGTATTCTATCTCTACACAAGCCT TCAATTCAGAAACCTTGATATAGAGGCGATGTATCCTAATTGAAACCCAA AGAGGCATGAATCACACCCGATCATCCTTGGTATGCGTTCTCCAAACATC GAAGTGCGCCTACAAAAACTCATCTGCTTGCTATATGGTTGCGGTGATAA ACGGTGGCTCGATCACGAACCGCGGCCTTTTTCGGCAGAGTAGGGTTAGC ACTTTCGAGTGCCAGCTGTAGGGTACGCCCGATTTCCATCATGTGTGTGG TGTTTGCGGTGAAGCGCCGTCCCGCGCCACATAATCTACAGCCGATTCCC CCCGCCCCTCTGCTGTATTTGAATGGCCAGGTGAAGGAGTTTTTAGATTG GGTGAGGAAAGTGGCACCGGCCGCGAAGATTGGACTGGCCCTCGCTTCGA TCGCGTTG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig12019:3..4810-

>mRNA_Ecto-sp13_S_contig12019.1726.1 ID=mRNA_Ecto-sp13_S_contig12019.1726.1|Name=mRNA_Ecto-sp13_S_contig12019.1726.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=2028bp|location=Sequence derived from alignment at Ecto-sp13_S_contig12019:3..4810- (Ectocarpus species13 EcNAP12_S_4_19m)
CAGGAGTGGCAGACTGCTCAGCGACAGGCCGAGAAAGCCAAGCAGACGCC
ACAAGATCGATGTGGTCCCCCGGCAAGTGGTTCAACTACAGGATACCCGA
TGGATCACGCAGCAGCACCTCCCCCCACGCTCCATCTGTGCGGCTTCATC
TCGGGCTCCGGCCGCAGGTTGGAGGACCTTTCGGTTCTTGGGAGAAAGAT
CTGGGAGATCGCCAACGAGGCGTCCCTGTTCCCGGACATCCATCAGACGG
TCCCCAAGTCCTGGAGGAGGGTGTGGGCCGTCATGGATGCGTTGCGCGAG
GGAGCAGACCCCCAGAAAGCGGTGCGACTGGACGGTCCTCTTACCCCGGT
CGAAGGGCGCGAGAAGCGCGAGTTTGTGACCCGGGAAGAAGCGTTCGAAG
CGTGGTGGGGTGCGGATGGCGAATCAGTGGCGGAGCTGAAGGCCAAAGGC
CCAGACAGCCAACAACTCAACCAGGATTCCAAACGTCTGTTCCAGGCGGC
GCTAAAGCTGCGGCAGATGGGTGGATCAGTCCTGGCGGCGTGTGGCCTGG
TCCACCTAAACGTCGCCTGGATCAATGAGTTGCTACGGGAGCTCCTGGAC
CATCGCTTGGCCGATCCAAAGCAGGCGAGCTTTGCCAACTGGTGGGTTGA
GCAGCTGAGGACGTACTGCCGCGAACGTGGCGTCTTCTTCAACAGGCTCA
TCGGCATCCACAGGCGCTTCGTCATTACGGGGGTGCTCACGAAGGAGTAC
CTTCGTTTTCTATGGCGGGAGGTAAAGGCGGTCCAGGACGATGAAGTTTT
CGACCGCCTAGTCGATACGATGGCTCTACACGACGCTATGTTTCCGTGTG
AAAAGAATGGGATCCATGAGGAAGGAGAGTTCATGGTACCCGCTCGGCTC
CCGGCCAGCGTTCCTTGTGCCTCCCTCGCGGAGCTGGAGAAAGCGGTATC
TCAAGGTACCCGGATGCAGTTCGTCATCGCGATCTACGCCGGCTATGTCC
CGCCGGGAATCATCCCGCAGTTTCTCGGCGAGTTGAAACGTAGGGACGGC
GGGATTTCCGGAGAGTTCGTGTTTCACGTTTCCTGGCACCGGGGGGTGGC
GTTCATGACGGCAGGGCAGCAGATCCTTGTGCGCCTCGGGGAGACTTGTG
CTCCTCCCCAACGTGTAGTGGAGGTGAACATTGCCGGGGATGCCGAAAAG
GACGTGTACGACACTGGTTTCGAAGTAAAAAAACTTGTTGCACGTCTTCT
GGAAAAGCGCTACCCAGGGCTGGACTTCGACCCTGAGGCTCAGCCCACCT
TTCTGAAGGGAAGAAAAGCCTGGCAGGATACCCGGGCCGCGCTTCGGGGA
GACTTGGTCGAAGAGCTGGAACGAAACCTGGAGGCGGTGCTGAGAAGGAT
CCTAGAACCCTCCAGCAATCCAGGCGACGGGCTGGCAGAATCCAACACGC
TCATCCCGAAACTCATCGATGGAGCTCTGGCGAAGAGGCTCAGTAGCTTG
TGCTCAGACATGCAGCTTGACGTCAACCGCAAGCTGAACGAGACGACTAT
GGAGATTGTGGCCGGCGTGGAACAAGTCGTCCAGGCGAACCTGTCGAACG
CGGCGGTTGCTGGGCTGAGACCGACAGAGAGGGACATCCTGGTTGGCGTT
GCGCGGGAAGTGGCCCTTCTGCGGTGGCCGATCCCTCGCTTTGTGTGCGT
GCTCCCCGCCCGGGACACGCGCCTCTCGGAGAGCGATAGATCTTTCGAGA
AGTGGTCGATTGCACTAAAGGAGTGGTGCACGTTCAAGAGCCCCGCGAAG
GACGTGAAGTACCCCAACCAGAAGACTAGCATCCTCGGCTTGAAGAAGCC
CCAGCTTACGAGGCTCGTGACGCGAGAACTCCGCCTATTCTTCCTCTGTG
GCCAAGACAAGAGCCTGGCCGAGTGTGGGCCCGATGGGCAAGGGTACGAG
GTGAAGGAGTTTTTAGATTGGGTGAGGAAAGTGGCACCGGCCGCGAAGAT
TGGACTGGCCCTCGCTTCGATCGCGTTG
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