mRNA_Ecto-sp13_S_contig11997.1703.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig11997.1703.1
Unique NamemRNA_Ecto-sp13_S_contig11997.1703.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig11997.1703.1 vs. uniprot
Match: D8LGV7_ECTSI (Histone deacetylase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LGV7_ECTSI)

HSP 1 Score: 437 bits (1124), Expect = 2.810e-152
Identity = 206/207 (99.52%), Postives = 206/207 (99.52%), Query Frame = 1 
Query:    7 GDIGHYYYGPGHPMKPHRLKLAHHLLLSYNLYREMDVYRPHLASSTELMRFHQADYVNFLEKVMPGPARGQGTGPQQQQTKFSVGEFTDCPVFEGLYRFCQSYTGASIDGAIKLNHDMADICINWSGGLHHAKKAEASGFCYVNDIVLAILELLKYHSRVLYIDIDIHHGDGVEEAFYTTDRVMTLSFHKYGDFFPGTGDIKDVGAK 627
            GDIGHYYYGPGHPMKPHRLKLAHHLLLSYNLYREMDVYRPHLASSTELMRFHQADYVNFLEKVMPGPARGQGTGPQQQ TKFSVGEFTDCPVFEGLYRFCQSYTGASIDGAIKLNHDMADICINWSGGLHHAKKAEASGFCYVNDIVLAILELLKYHSRVLYIDIDIHHGDGVEEAFYTTDRVMTLSFHKYGDFFPGTGDIKDVGAK
Sbjct:   13 GDIGHYYYGPGHPMKPHRLKLAHHLLLSYNLYREMDVYRPHLASSTELMRFHQADYVNFLEKVMPGPARGQGTGPQQQ-TKFSVGEFTDCPVFEGLYRFCQSYTGASIDGAIKLNHDMADICINWSGGLHHAKKAEASGFCYVNDIVLAILELLKYHSRVLYIDIDIHHGDGVEEAFYTTDRVMTLSFHKYGDFFPGTGDIKDVGAK 218
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BLAST of mRNA_Ecto-sp13_S_contig11997.1703.1 vs. uniprot
Match: W7UAJ6_9STRA (Histone deacetylase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7UAJ6_9STRA)

HSP 1 Score: 339 bits (870), Expect = 8.150e-113
Identity = 151/207 (72.95%), Postives = 175/207 (84.54%), Query Frame = 1 
Query:    7 GDIGHYYYGPGHPMKPHRLKLAHHLLLSYNLYREMDVYRPHLASSTELMRFHQADYVNFLEKVMPGPARGQGTGPQQQQTKFSVGEFTDCPVFEGLYRFCQSYTGASIDGAIKLNHDMADICINWSGGLHHAKKAEASGFCYVNDIVLAILELLKYHSRVLYIDIDIHHGDGVEEAFYTTDRVMTLSFHKYGDFFPGTGDIKDVGAK 627
            GD+GHYYYGPGHPMKPHRLKL HHL+L Y LYR+M+VYRPH+A++ EL +FH  +YVNFL +V P   R   T      +KF+VGE+TDCP+F+G+  FC+ YTG SIDGA KLNH + D+ +NWSGGLHHAKK EASGFCY+NDIVLAILELLKYH RVLYIDIDIHHGDGVEEAFY TDRVMT+SFH+YGDFFPGTG+IKDVGAK
Sbjct:   62 GDVGHYYYGPGHPMKPHRLKLTHHLVLGYGLYRKMEVYRPHIATTQELQKFHSQEYVNFLSRVNPDMGR---TLSSSVHSKFNVGEYTDCPIFDGMMEFCKIYTGCSIDGAQKLNHKITDVAVNWSGGLHHAKKGEASGFCYINDIVLAILELLKYHPRVLYIDIDIHHGDGVEEAFYCTDRVMTVSFHRYGDFFPGTGNIKDVGAK 265
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BLAST of mRNA_Ecto-sp13_S_contig11997.1703.1 vs. uniprot
Match: A0A7S1U991_9STRA (Histone deacetylase n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U991_9STRA)

HSP 1 Score: 338 bits (866), Expect = 1.300e-111
Identity = 150/207 (72.46%), Postives = 175/207 (84.54%), Query Frame = 1 
Query:    7 GDIGHYYYGPGHPMKPHRLKLAHHLLLSYNLYREMDVYRPHLASSTELMRFHQADYVNFLEKVMPGPARGQGTGPQQQQTKFSVGEFTDCPVFEGLYRFCQSYTGASIDGAIKLNHDMADICINWSGGLHHAKKAEASGFCYVNDIVLAILELLKYHSRVLYIDIDIHHGDGVEEAFYTTDRVMTLSFHKYGDFFPGTGDIKDVGAK 627
            GD+GH+YYGPGHPMKPHRLKL HHLLL+Y LYR+MDVYRPH A++ E+ RFH  DY++FL +V P   +      Q Q  KF++G FTDCPVF+GL+ F Q YTG S+DGA+KLNH + D+ +NWSGGLHHAKK+EASGFCYVNDIVLAILELLKYH RVLY+DIDIHHGDGVEEAFY TDRVMT+SFHK+G+FFPGTGDIKD GAK
Sbjct:   61 GDVGHFYYGPGHPMKPHRLKLTHHLLLTYGLYRKMDVYRPHPATAQEMTRFHSDDYIDFLSRVTPDNLKTF----QSQMQKFNIGAFTDCPVFDGLFEFTQIYTGCSLDGAVKLNHGLTDVAVNWSGGLHHAKKSEASGFCYVNDIVLAILELLKYHPRVLYVDIDIHHGDGVEEAFYCTDRVMTVSFHKFGEFFPGTGDIKDTGAK 263
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BLAST of mRNA_Ecto-sp13_S_contig11997.1703.1 vs. uniprot
Match: A0A0H5R5F2_9EUKA (Histone deacetylase n=1 Tax=Spongospora subterranea TaxID=70186 RepID=A0A0H5R5F2_9EUKA)

HSP 1 Score: 330 bits (847), Expect = 5.430e-110
Identity = 149/207 (71.98%), Postives = 176/207 (85.02%), Query Frame = 1 
Query:    7 GDIGHYYYGPGHPMKPHRLKLAHHLLLSYNLYREMDVYRPHLASSTELMRFHQADYVNFLEKVMPGPARGQGTGPQQQQTKFSVGEFTDCPVFEGLYRFCQSYTGASIDGAIKLNHDMADICINWSGGLHHAKKAEASGFCYVNDIVLAILELLKYHSRVLYIDIDIHHGDGVEEAFYTTDRVMTLSFHKYGDFFPGTGDIKDVGAK 627
            GD G YYYGPGHPMKPHRL++ H LLL Y LY++MDVY PH+A+S E+  FH ADY++FL++V P   +       QQ  +F++GEFTDCPVF+G+Y FC +YTGASIDGAIKLN+   DI INW+GGLHHAKK+EASGFCYVNDIVLAILELLKYH+RVLYIDIDIHHGDGVEEAFYTTDRVMT+SFHK+G+FFPGTGD+KD GA+
Sbjct:   10 GDYGSYYYGPGHPMKPHRLRMTHSLLLGYGLYKKMDVYTPHIATSQEMSEFHSADYIDFLKRVSPDNYKSF----MQQLEEFNLGEFTDCPVFDGIYDFCATYTGASIDGAIKLNNGEEDIAINWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHARVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKFGNFFPGTGDVKDTGAR 212
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BLAST of mRNA_Ecto-sp13_S_contig11997.1703.1 vs. uniprot
Match: A0A7S2CEU7_9STRA (Histone deacetylase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CEU7_9STRA)

HSP 1 Score: 330 bits (846), Expect = 1.080e-109
Identity = 156/225 (69.33%), Postives = 174/225 (77.33%), Query Frame = 1 
Query:    7 GDIGHYYYGPGHPMKPHRLKLAHHLLLSYNLYREMDVYRPHLASSTELMRFHQADYVNFLEKVMP---------GPARG---QGTGPQ------QQQTKFSVGEFTDCPVFEGLYRFCQSYTGASIDGAIKLNHDMADICINWSGGLHHAKKAEASGFCYVNDIVLAILELLKYHSRVLYIDIDIHHGDGVEEAFYTTDRVMTLSFHKYGDFFPGTGDIKDVGAK 627
            GD+GHYYYGPGHPMKPHRLKL HHLLLSY LYR+MDVYRPH A + E+ RFH  +Y+ FL ++ P           ARG   Q  G        QQ   F+VGE+TDCPVF+GL+ FC  YTGASIDGA KLN    DI +NWSGGLHHAKK EASGFCYVNDIV+AILELLK H+RVLYIDIDIHHGDGVEEAFY TDRVMT+SFHKYGDFFPGTGD+KDVG +
Sbjct:   12 GDMGHYYYGPGHPMKPHRLKLTHHLLLSYGLYRKMDVYRPHRAEAEEMARFHAPEYIEFLRRITPDSSAILSQTASARGVLSQAVGASATQSLAQQMQGFNVGEYTDCPVFDGLFEFCSIYTGASIDGACKLNQGNCDIAVNWSGGLHHAKKGEASGFCYVNDIVVAILELLKRHARVLYIDIDIHHGDGVEEAFYLTDRVMTVSFHKYGDFFPGTGDLKDVGVR 236
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BLAST of mRNA_Ecto-sp13_S_contig11997.1703.1 vs. uniprot
Match: A0A6A7G6V0_9CRUS (Histone deacetylase (Fragment) n=2 Tax=Hirondellea gigas TaxID=1518452 RepID=A0A6A7G6V0_9CRUS)

HSP 1 Score: 329 bits (844), Expect = 1.410e-109
Identity = 150/206 (72.82%), Postives = 175/206 (84.95%), Query Frame = 1 
Query:   10 DIGHYYYGPGHPMKPHRLKLAHHLLLSYNLYREMDVYRPHLASSTELMRFHQADYVNFLEKVMPGPARGQGTGPQQQQTKFSVGEFTDCPVFEGLYRFCQSYTGASIDGAIKLNHDMADICINWSGGLHHAKKAEASGFCYVNDIVLAILELLKYHSRVLYIDIDIHHGDGVEEAFYTTDRVMTLSFHKYGDFFPGTGDIKDVGAK 627
            DIG YYYG GHPMKPHRL+L H+LLLSY LYR+M+VY+PH A+  E+ +FH  +YV+FL+KV P   +       Q   KF++GEFTDCP+F+GLY+FCQSY+G SIDGA+KLNH M DI +NWSGGLHHAKK+EASGFCYVNDIVL+ILELLKYHSRVLYIDIDIHHGDGVEEAFYTTDRV+T SFHK+GDFFPGTGD  D+GAK
Sbjct:   21 DIGSYYYGSGHPMKPHRLRLTHNLLLSYKLYRKMEVYKPHYATDDEISQFHYDEYVDFLKKVTPDNRKEYA----QNLQKFNLGEFTDCPIFDGLYQFCQSYSGGSIDGAMKLNHGMTDIAVNWSGGLHHAKKSEASGFCYVNDIVLSILELLKYHSRVLYIDIDIHHGDGVEEAFYTTDRVLTCSFHKFGDFFPGTGDHIDLGAK 222
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BLAST of mRNA_Ecto-sp13_S_contig11997.1703.1 vs. uniprot
Match: A0A7S4E8E9_9STRA (Histone deacetylase n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E8E9_9STRA)

HSP 1 Score: 329 bits (844), Expect = 1.540e-109
Identity = 153/207 (73.91%), Postives = 173/207 (83.57%), Query Frame = 1 
Query:   10 DIGHYYYGPGHPMKPHRLKLAHHLLLSYNLYREMDVYRPHLASSTELMRFHQADYVNFLEKVMPGPARGQGTGP-QQQQTKFSVGEFTDCPVFEGLYRFCQSYTGASIDGAIKLNHDMADICINWSGGLHHAKKAEASGFCYVNDIVLAILELLKYHSRVLYIDIDIHHGDGVEEAFYTTDRVMTLSFHKYGDFFPGTGDIKDVGAK 627
            D+GH+YYGPGHPMKPHR+K+AHHL+LS  LYR++DVYRPHLA+  E+ RFH  DYV FL KV P     + T P  QQ  +F+VGE TDCPV+EGL+ F Q  +GASIDGA+KLNH   D+ INWSGGLHHAKKAEASGFCY+NDIVLAILELLKYH+RVLYIDIDIHHGDGVEEAFY TDRVMT SFHKYGDFFPGTG I D+GAK
Sbjct:   13 DVGHFYYGPGHPMKPHRIKMAHHLILSTGLYRKLDVYRPHLAAPLEMTRFHSDDYVKFLSKVSP-----ESTRPFLQQMAQFNVGECTDCPVYEGLFEFQQIASGASIDGAVKLNHGACDVAINWSGGLHHAKKAEASGFCYINDIVLAILELLKYHARVLYIDIDIHHGDGVEEAFYCTDRVMTCSFHKYGDFFPGTGAITDLGAK 214
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BLAST of mRNA_Ecto-sp13_S_contig11997.1703.1 vs. uniprot
Match: A0A7S2GCX6_9STRA (Histone deacetylase n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2GCX6_9STRA)

HSP 1 Score: 330 bits (846), Expect = 4.530e-109
Identity = 151/221 (68.33%), Postives = 170/221 (76.92%), Query Frame = 1 
Query:   10 DIGHYYYGPGHPMKPHRLKLAHHLLLSYNLYREMDVYRPHLASSTELMRFHQADYVNFLEKVMPG---------------PARGQGTGPQQQQTKFSVGEFTDCPVFEGLYRFCQSYTGASIDGAIKLNHDMADICINWSGGLHHAKKAEASGFCYVNDIVLAILELLKYHSRVLYIDIDIHHGDGVEEAFYTTDRVMTLSFHKYGDFFPGTGDIKDVGAK 627
            D+GHYYYGPGHPMKPHRLKL HHLLL+Y LYR+MDVYRPH A + E+ RFH  +Y+ FL+++ P                P +  G     Q  +F+VGE+TDCPVF+GLY FC  YTGASIDGA KLN    DI +NWSGGLHHAKK EASGFCYVNDIV+ ILELLK H+RVLYIDIDIHHGDGVEEAFY TDRVMT SFHKYGDFFPGTGD+KDVG K
Sbjct:   15 DMGHYYYGPGHPMKPHRLKLTHHLLLTYGLYRKMDVYRPHRAGAEEMARFHSPEYIEFLKRITPDTAAILSQTTQAQKMQPGQNGGASLSAQMQRFNVGEYTDCPVFDGLYEFCSIYTGASIDGACKLNQGDCDIAVNWSGGLHHAKKGEASGFCYVNDIVVGILELLKRHARVLYIDIDIHHGDGVEEAFYLTDRVMTASFHKYGDFFPGTGDLKDVGVK 235
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BLAST of mRNA_Ecto-sp13_S_contig11997.1703.1 vs. uniprot
Match: K0S8W0_THAOC (Histone deacetylase n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0S8W0_THAOC)

HSP 1 Score: 328 bits (841), Expect = 6.380e-109
Identity = 148/206 (71.84%), Postives = 168/206 (81.55%), Query Frame = 1 
Query:   10 DIGHYYYGPGHPMKPHRLKLAHHLLLSYNLYREMDVYRPHLASSTELMRFHQADYVNFLEKVMPGPARGQGTGPQQQQTKFSVGEFTDCPVFEGLYRFCQSYTGASIDGAIKLNHDMADICINWSGGLHHAKKAEASGFCYVNDIVLAILELLKYHSRVLYIDIDIHHGDGVEEAFYTTDRVMTLSFHKYGDFFPGTGDIKDVGAK 627
            D+GH+YYGP HPMKPHR+K+AHHL+LSY LYR+M+VYR H AS  E+  FH  DY+NFL KV P   RG       Q  KF+VGE+TDCPVF+GLY F Q YTGAS+DGA+KLN    D+ +NWSGGLHHAKK+EASGFCY+NDIVLAILELLK H+RVLYIDID+HHGDGVEEAFY TDRVMT S HKYGDFFPGTG IKD GAK
Sbjct:   15 DVGHFYYGPSHPMKPHRIKMAHHLILSYGLYRKMEVYRSHPASPAEMSAFHSEDYINFLAKVTPDNLRGYSN----QMQKFNVGEYTDCPVFDGLYEFTQLYTGASLDGAVKLNRGDCDVAVNWSGGLHHAKKSEASGFCYINDIVLAILELLKVHARVLYIDIDVHHGDGVEEAFYCTDRVMTFSLHKYGDFFPGTGHIKDTGAK 216
[Close]
BLAST of mRNA_Ecto-sp13_S_contig11997.1703.1 vs. uniprot
Match: A0A7S1GDT3_9STRA (Histone deacetylase n=2 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1GDT3_9STRA)

HSP 1 Score: 327 bits (839), Expect = 1.800e-108
Identity = 145/204 (71.08%), Postives = 172/204 (84.31%), Query Frame = 1 
Query:   10 DIGHYYYGPGHPMKPHRLKLAHHLLLSYNLYREMDVYRPHLASSTELMRFHQADYVNFLEKVMPGPARGQGTGPQQQQTKFSVGEFTDCPVFEGLYRFCQSYTGASIDGAIKLNHDMADICINWSGGLHHAKKAEASGFCYVNDIVLAILELLKYHSRVLYIDIDIHHGDGVEEAFYTTDRVMTLSFHKYGDFFPGTGDIKDVG 621
            D GHY+YGPGHPMKPHRLKL HHLLL+Y LYR++ V++PH A++ E+ +FH  DY++FL +V P   +      Q Q TKF+VGE+TDCPVF  ++ FC  YTGAS+DGAI+LNH +AD+ INW+GGLHHAKK+EASGFCYVNDIVLAILE+LKYH RVLYIDIDIHHGDGVEEAFY TDRVMT+SFHK+GDFFPGTGDI DVG
Sbjct:   15 DFGHYHYGPGHPMKPHRLKLTHHLLLTYGLYRKLHVFKPHRATALEMTKFHSPDYIDFLSRVSPDTLKTY----QSQMTKFTVGEYTDCPVFADMFDFCSMYTGASLDGAIRLNHGLADVAINWAGGLHHAKKSEASGFCYVNDIVLAILEMLKYHPRVLYIDIDIHHGDGVEEAFYCTDRVMTVSFHKFGDFFPGTGDIHDVG 214
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig11997.1703.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LGV7_ECTSI2.810e-15299.52Histone deacetylase n=2 Tax=Ectocarpus TaxID=2879 ... [more]
W7UAJ6_9STRA8.150e-11372.95Histone deacetylase n=2 Tax=Monodopsidaceae TaxID=... [more]
A0A7S1U991_9STRA1.300e-11172.46Histone deacetylase n=1 Tax=Phaeomonas parva TaxID... [more]
A0A0H5R5F2_9EUKA5.430e-11071.98Histone deacetylase n=1 Tax=Spongospora subterrane... [more]
A0A7S2CEU7_9STRA1.080e-10969.33Histone deacetylase n=1 Tax=Dictyocha speculum Tax... [more]
A0A6A7G6V0_9CRUS1.410e-10972.82Histone deacetylase (Fragment) n=2 Tax=Hirondellea... [more]
A0A7S4E8E9_9STRA1.540e-10973.91Histone deacetylase n=1 Tax=Pelagomonas calceolata... [more]
A0A7S2GCX6_9STRA4.530e-10968.33Histone deacetylase n=1 Tax=Florenciella parvula T... [more]
K0S8W0_THAOC6.380e-10971.84Histone deacetylase n=1 Tax=Thalassiosira oceanica... [more]
A0A7S1GDT3_9STRA1.800e-10871.08Histone deacetylase n=2 Tax=Bicosoecida sp. CB-201... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig11997contigEcto-sp13_S_contig11997:207..2977 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score436.4
Seed ortholog evalue7.4e-120
Seed eggNOG ortholog2880.D8LGV7
Preferred nameHDAC3
Model size627
KEGG koko:K06067,ko:K11404,ko:K11483
KEGG Pathwayko04110,ko04213,ko04330,ko04919,ko05016,ko05034,ko05165,ko05169,ko05200,ko05202,ko05203,ko05220,map04110,map04213,map04330,map04919,map05016,map05034,map05165,map05169,map05200,map05202,map05203,map05220
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000118,GO:0000122,GO:0000226,GO:0000228,GO:0000785,GO:0000790,GO:0000819,GO:0001525,GO:0001558,GO:0001568,GO:0001817,GO:0001818,GO:0001889,GO:0001932,GO:0001933,GO:0001934,GO:0001944,GO:0003002,GO:0003006,GO:0003674,GO:0003676,GO:0003677,GO:0003682,GO:0003712,GO:0003714,GO:0003824,GO:0004407,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005694,GO:0005737,GO:0005794,GO:0005819,GO:0005829,GO:0005856,GO:0005874,GO:0005876,GO:0005886,GO:0006139,GO:0006259,GO:0006323,GO:0006325,GO:0006333,GO:0006338,GO:0006342,GO:0006355,GO:0006357,GO:0006464,GO:0006476,GO:0006725,GO:0006807,GO:0006950,GO:0006996,GO:0007010,GO:0007017,GO:0007049,GO:0007051,GO:0007059,GO:0007062,GO:0007063,GO:0007154,GO:0007275,GO:0007346,GO:0007389,GO:0007399,GO:0007406,GO:0007548,GO:0007623,GO:0008104,GO:0008134,GO:0008150,GO:0008152,GO:0008285,GO:0009410,GO:0009605,GO:0009612,GO:0009628,GO:0009653,GO:0009719,GO:0009725,GO:0009888,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009953,GO:0009966,GO:0009967,GO:0009968,GO:0009987,GO:0009991,GO:0010033,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010562,GO:0010563,GO:0010564,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0010639,GO:0010646,GO:0010647,GO:0010648,GO:0010721,GO:0010941,GO:0010942,GO:0010948,GO:0012505,GO:0014070,GO:0015630,GO:0016020,GO:0016043,GO:0016202,GO:0016458,GO:0016569,GO:0016570,GO:0016575,GO:0016787,GO:0016810,GO:0016811,GO:0017053,GO:0017136,GO:0019213,GO:0019216,GO:0019219,GO:0019220,GO:0019222,GO:0019538,GO:0019899,GO:0019904,GO:0022008,GO:0022402,GO:0022414,GO:0022607,GO:0023051,GO:0023056,GO:0023057,GO:0030154,GO:0030307,GO:0030332,GO:0030544,GO:0031072,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031396,GO:0031397,GO:0031399,GO:0031400,GO:0031401,GO:0031490,GO:0031497,GO:0031507,GO:0031647,GO:0031667,GO:0031668,GO:0031960,GO:0031974,GO:0031981,GO:0032006,GO:0032008,GO:0032204,GO:0032268,GO:0032269,GO:0032270,GO:0032386,GO:0032387,GO:0032388,GO:0032501,GO:0032502,GO:0032507,GO:0032652,GO:0032680,GO:0032692,GO:0032720,GO:0032870,GO:0032872,GO:0032873,GO:0032874,GO:0032879,GO:0032880,GO:0032922,GO:0032991,GO:0033036,GO:0033043,GO:0033044,GO:0033045,GO:0033157,GO:0033365,GO:0033554,GO:0033558,GO:0033993,GO:0034399,GO:0034401,GO:0034405,GO:0034504,GO:0034613,GO:0034641,GO:0034728,GO:0034739,GO:0034967,GO:0034979,GO:0035239,GO:0035295,GO:0035601,GO:0036211,GO:0040008,GO:0040014,GO:0040020,GO:0040029,GO:0042127,GO:0042221,GO:0042262,GO:0042306,GO:0042307,GO:0042325,GO:0042326,GO:0042327,GO:0042493,GO:0042826,GO:0042981,GO:0043065,GO:0043066,GO:0043067,GO:0043068,GO:0043069,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043408,GO:0043409,GO:0043410,GO:0043412,GO:0043433,GO:0043523,GO:0043525,GO:0043696,GO:0043697,GO:0043933,GO:0044085,GO:0044092,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044430,GO:0044444,GO:0044446,GO:0044451,GO:0044454,GO:0044464,GO:0045129,GO:0045138,GO:0045185,GO:0045595,GO:0045596,GO:0045786,GO:0045814,GO:0045835,GO:0045843,GO:0045892,GO:0045893,GO:0045927,GO:0045934,GO:0045935,GO:0045936,GO:0045937,GO:0045944,GO:0046328,GO:0046329,GO:0046483,GO:0046661,GO:0046822,GO:0046823,GO:0046824,GO:0046825,GO:0046826,GO:0048511,GO:0048513,GO:0048514,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048545,GO:0048583,GO:0048584,GO:0048585,GO:0048634,GO:0048635,GO:0048638,GO:0048646,GO:0048699,GO:0048731,GO:0048732,GO:0048856,GO:0048869,GO:0048880,GO:0048881,GO:0048882,GO:0048915,GO:0048916,GO:0048925,GO:0050767,GO:0050768,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051020,GO:0051049,GO:0051050,GO:0051051,GO:0051052,GO:0051059,GO:0051090,GO:0051093,GO:0051098,GO:0051101,GO:0051128,GO:0051129,GO:0051147,GO:0051148,GO:0051153,GO:0051154,GO:0051171,GO:0051172,GO:0051173,GO:0051174,GO:0051179,GO:0051222,GO:0051223,GO:0051224,GO:0051225,GO:0051235,GO:0051239,GO:0051241,GO:0051246,GO:0051247,GO:0051248,GO:0051252,GO:0051253,GO:0051254,GO:0051276,GO:0051384,GO:0051445,GO:0051447,GO:0051457,GO:0051641,GO:0051651,GO:0051716,GO:0051726,GO:0051783,GO:0051784,GO:0051879,GO:0051960,GO:0051961,GO:0051983,GO:0055024,GO:0055026,GO:0060255,GO:0060284,GO:0060303,GO:0060341,GO:0060548,GO:0061008,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070201,GO:0070210,GO:0070302,GO:0070303,GO:0070304,GO:0070491,GO:0070727,GO:0070828,GO:0070868,GO:0070869,GO:0070887,GO:0070925,GO:0070932,GO:0070933,GO:0071103,GO:0071107,GO:0071214,GO:0071260,GO:0071310,GO:0071374,GO:0071495,GO:0071496,GO:0071498,GO:0071548,GO:0071704,GO:0071824,GO:0071840,GO:0071922,GO:0071944,GO:0072091,GO:0072358,GO:0072359,GO:0072595,GO:0080090,GO:0080134,GO:0080135,GO:0090087,GO:0090304,GO:0090316,GO:0090317,GO:0090598,GO:0097159,GO:0097327,GO:0097549,GO:0098732,GO:0098813,GO:0099080,GO:0099081,GO:0099512,GO:0099513,GO:0104004,GO:0140096,GO:0140110,GO:1900180,GO:1900182,GO:1901214,GO:1901216,GO:1901360,GO:1901363,GO:1901564,GO:1901654,GO:1901700,GO:1901861,GO:1901862,GO:1902494,GO:1902531,GO:1902532,GO:1902533,GO:1902679,GO:1902680,GO:1902692,GO:1903320,GO:1903321,GO:1903506,GO:1903507,GO:1903508,GO:1903555,GO:1903556,GO:1903827,GO:1903828,GO:1903829,GO:1904035,GO:1904037,GO:1904589,GO:1904591,GO:1904950,GO:1904951,GO:1905207,GO:1905208,GO:1905634,GO:1990679,GO:2000026,GO:2000112,GO:2000113,GO:2000177,GO:2000178,GO:2000241,GO:2000242,GO:2000647,GO:2000674,GO:2000676,GO:2000725,GO:2000726,GO:2001141
Exons6
EggNOG free text desc.NAD-dependent histone deacetylase activity (H3-K14 specific)
EggNOG OGsCOG0123@1,KOG1342@2759
Ec32 ortholog descriptionHistone deacetylase
Ec32 orthologEc-28_001400.1
EC3.5.1.98
Cds size627
COG Functional cat.BQ
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03036
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig11997.1703.1prot_Ecto-sp13_S_contig11997.1703.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig11997 207..2977 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462636.3533168-CDS-Ecto-sp13_S_contig11997:206..3051681462636.3533168-CDS-Ecto-sp13_S_contig11997:206..305Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11997 207..305 -
1681462636.3639557-CDS-Ecto-sp13_S_contig11997:559..6791681462636.3639557-CDS-Ecto-sp13_S_contig11997:559..679Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11997 560..679 -
1681462636.3720694-CDS-Ecto-sp13_S_contig11997:1039..11381681462636.3720694-CDS-Ecto-sp13_S_contig11997:1039..1138Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11997 1040..1138 -
1681462636.3800857-CDS-Ecto-sp13_S_contig11997:1521..15961681462636.3800857-CDS-Ecto-sp13_S_contig11997:1521..1596Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11997 1522..1596 -
1681462636.3906233-CDS-Ecto-sp13_S_contig11997:1975..20651681462636.3906233-CDS-Ecto-sp13_S_contig11997:1975..2065Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11997 1976..2065 -
1681462636.3985837-CDS-Ecto-sp13_S_contig11997:2833..29771681462636.3985837-CDS-Ecto-sp13_S_contig11997:2833..2977Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11997 2834..2977 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig11997.1703.1

>prot_Ecto-sp13_S_contig11997.1703.1 ID=prot_Ecto-sp13_S_contig11997.1703.1|Name=mRNA_Ecto-sp13_S_contig11997.1703.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=209bp
HPGDIGHYYYGPGHPMKPHRLKLAHHLLLSYNLYREMDVYRPHLASSTEL
MRFHQADYVNFLEKVMPGPARGQGTGPQQQQTKFSVGEFTDCPVFEGLYR
FCQSYTGASIDGAIKLNHDMADICINWSGGLHHAKKAEASGFCYVNDIVL
AILELLKYHSRVLYIDIDIHHGDGVEEAFYTTDRVMTLSFHKYGDFFPGT
GDIKDVGAK
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mRNA from alignment at Ecto-sp13_S_contig11997:207..2977-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig11997.1703.1 ID=mRNA_Ecto-sp13_S_contig11997.1703.1|Name=mRNA_Ecto-sp13_S_contig11997.1703.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2771bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11997:207..2977- (Ectocarpus species13 EcNAP12_S_4_19m)
CACCCAGGCGATATCGGGCACTATTACTATGGGCCCGGTCACCCGATGAA
GCCTCACAGGCTGAAACTGGCCCACCACCTCCTCCTGTCTTACAACTTGT
ACCGCGAGATGGACGTCTACAGACCCCACCTGGCGAGCAGCACGGTGAGC
CAGCTCTTGCTCTTAGCGGCGGGCGATGTTTTGCCGCGGTTCGTGGTGTT
GGTATGACAGCAGCATTTGCTACCAACTCTGTCCGGAAAGCTAGGATATT
CTCGCCTGTATCCAAATGGTCTGTATCCAAATGGCCCCTGTAAATTGGAA
CAGAGTGGTAGGTTCGTGCTGATCGATGTGGTGATTCTTCATGCTCTGGT
GTTGCCATTGTTTGCTGAGTTGGGTGCTGGACATTATTCTGGTTTGTAGT
GCCGGAGGCACATGTATCGATGGCGGCCGTGGCCGTATTGTTGATTGTCG
TACGCCCCCCCCCGTCAGTTGGGCATATACGCACCTGCCTACCTACAGGG
CGGCACGTGGAGCATGCATACCGTGACGCAGCGCATAGGCTCCAATTTTC
TTCTTACGTCTCTCCCATCTACTGTATGTCGATGAGTTACATCATAAACA
CTCCTCCGACATGCAGTCCCTCCTGTTTTTTTTTTGTTGTGGTGGCATTT
GGTGCGGTTTTATGAACGCAGCTTGTGTCGGCGGATAGTTTCCGTTGGCG
TCGTATTAGAAGCCAGCGGACGCTAGAGATTTTCAGATTTCTGCTCAGCG
TCGAATTCTCGCTGTTGTCTGCCAGGGCAACCTTGTTCGGTTTCATGTTT
CAAGAGCCCCGGTGCCCCCCCCCCCCCCCCCCCCCCACCTGCGGTGTTCT
CTCCCCTCCCCTTCACCGGTGTTCTCTCCCCTCCCCTGTCACCTCGATGG
ATCAACTCGCAGGAGCTGATGCGGTTTCACCAAGCGGACTACGTCAACTT
CCTCGAGAAAGTCATGCCCGGTCCCGCGCGTGGTCAGGGGACTGGTCCTC
AGGTGAGGTGCGCGTCTCGAGCGAGGCGTGCGACGTGGTGAGACACCTCT
CGCCGATGTACTCGTGCGCTGCAGGGCTTTGGCAGACCGCGATTCGAATT
CGTGCAAAGAGTTTGTAGTTGTTGAAGAAGAATTTTGGGGGTTGTGCGCG
ACGTTGCTTCTGCACGTGTACATTGGCTGCAATGTATGCGCAAGATCTTT
GTTTGCGCCACTTCCATCCAGGAGAAGCGATGCTGTGCTTTCAGAAACGA
GTTCCATACACGGGCCCGAATATGTTGTATGTTGCCCCCCCCTTCCCCAC
CTTGTACAAGCAACTAATTCCCCTCGCCCTCCCACCCTCCCTCCCCGTTC
CAACCCCGGTGGAAAACCGCTACGCGACGAGCAGCAGCAAACCAAGTTCA
GCGTCGGCGAATTCACCGACTGCCCGGTGTTTGAGGGTCTCTACCGGTTC
TGCCAGGTGGGTGAAGAACGGTAGACGTTTTTGTCTTTATCTCCAACTAC
AGGAGAGGTCTCTGTTTAGTACTGGTTGAACAGAGCCGGTTGAATAGTGC
CGGTTGTCGGTATTGTGCCTGTGTTTTTCGGCTCGCACACACTGGAATAC
CAAGTTGTTGTTCCGTGCTTAGAATAGTGCCGTCGTCCAGTTTAGTGCCG
GTGCAATTTCGGCGCACACCCCGGCACTGAACAGGGGACCTCTACTGTAC
GCGAAGCATTTTTTCCAAACGTTGTCAGGAGCCCACGTCCAAAAACCGAG
CAAAGCGGAATGGCATCCGGGCGACTGCTGCTGTTCAGAAACACCATCCG
CGGACACCAACCCTCTTGTGATTTTTTTTTTTTTTTCAGTCTTACACCGG
AGCGTCGATCGACGGCGCGATCAAGCTCAACCACGACATGGCGGACATCT
GCATCAACTGGTCGGGCGGGCTTCACCACGCCAAGAAGGTGAAAACGGGA
GGGAAACGAAAAGGCGCCAGACAGAGCGCGTCTCTCGCTGCTGCTGTGCT
TCAGATTCCACGTATGCTGCCATGCTTGCGCGTCTTTTTACGTTGCCACA
CGCAGTTTTTCTTTTTTTTTCATCTGTGTCCATACCTACTGTTTTTTTTG
TGCATGCTCCTTGTTTGGGCGTGCTTCCCTCGCTGGGATTATACGACCGT
ATGGCGGAGAGGGGAGGAATAACACTACCTGTCGCCGCGAGTGTACCGGA
GTCTGGGGCTCGAGCATGACGGCGGTTTGTAGCAGCAATGTCGCCGATGG
GGTTCATAAGCGTTCGTTCATGTGTGTGTGTGTGTGTGGTTTGTTCAGGC
GGAGGCATCGGGCTTCTGCTATGTAAACGACATCGTGCTGGCTATCCTCG
AGCTTCTCAAGTACCACTCCCGCGTGCTGTACATCGACATCGACATACAC
CATGGCGACGGTGTGGAGGTGCGCTGTTGCTGCTGCTATTGGTGATATTT
TTGTCGATGGTGAAATTTGTGGTTCGCTTCCCCATTCAGTGGGTGATTTG
GTTACGTACGCAGATTGCATACTCCAAACAAAGACTTCTTCGGAGTTGCC
TTGTAGTACCTCTTTTTCTCCATGATAACAAAGAATAGTAGAATAACAGA
TAAATTAGTGTTCGCACATAAATATATGTGTTCCATGTTTCCATCCTTTT
CTTGCTTTTGTTGCTTTTCCAGGAAGCGTTCTACACGACGGATCGCGTGA
TGACCCTATCGTTCCACAAGTACGGCGACTTCTTCCCCGGCACGGGTGAC
ATCAAGGACGTCGGTGCGAAG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig11997:207..2977-

>mRNA_Ecto-sp13_S_contig11997.1703.1 ID=mRNA_Ecto-sp13_S_contig11997.1703.1|Name=mRNA_Ecto-sp13_S_contig11997.1703.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=627bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11997:207..2977- (Ectocarpus species13 EcNAP12_S_4_19m)
CACCCAGGCGATATCGGGCACTATTACTATGGGCCCGGTCACCCGATGAA
GCCTCACAGGCTGAAACTGGCCCACCACCTCCTCCTGTCTTACAACTTGT
ACCGCGAGATGGACGTCTACAGACCCCACCTGGCGAGCAGCACGGAGCTG
ATGCGGTTTCACCAAGCGGACTACGTCAACTTCCTCGAGAAAGTCATGCC
CGGTCCCGCGCGTGGTCAGGGGACTGGTCCTCAGCAGCAGCAAACCAAGT
TCAGCGTCGGCGAATTCACCGACTGCCCGGTGTTTGAGGGTCTCTACCGG
TTCTGCCAGTCTTACACCGGAGCGTCGATCGACGGCGCGATCAAGCTCAA
CCACGACATGGCGGACATCTGCATCAACTGGTCGGGCGGGCTTCACCACG
CCAAGAAGGCGGAGGCATCGGGCTTCTGCTATGTAAACGACATCGTGCTG
GCTATCCTCGAGCTTCTCAAGTACCACTCCCGCGTGCTGTACATCGACAT
CGACATACACCATGGCGACGGTGTGGAGGAAGCGTTCTACACGACGGATC
GCGTGATGACCCTATCGTTCCACAAGTACGGCGACTTCTTCCCCGGCACG
GGTGACATCAAGGACGTCGGTGCGAAG
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